Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
ABCD4_chr14_74280269_74307934	74303948	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 homoSapiens_chm13v2.hp1 HG00323.hp2 homoSapiens_chm13v2.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0078 a0002c0002t0001g0080 a0002c0002t0001g0078 a0002c0002t0001g0080	2	384	0.0052	0	c.-10 others(5): Show c.-1036A>G	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1014	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74303992	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-10 others(5): Show c.-1080G>C	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1058	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304152	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-12 others(5): Show c.-1240A>G	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1218	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304187	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp1 NA18522.hp1 HG02559.hp1 NA18522.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0139 a0001c0008t0001g0140 a0001c0008t0001g0139 a0001c0008t0001g0140	2	384	0.0052	0	c.-12 others(5): Show c.-1275C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1253	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304249	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0013 a0003c0003t0013	a0003c0003t0013g0136 a0003c0003t0013g0136	1	384	0.0026	0	c.-13 others(5): Show c.-1337G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1315	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304311	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-13 others(5): Show c.-1399A>G	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1377	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304312	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0145 a0001c0001t0002g0145	1	384	0.0026	0	c.-14 others(5): Show c.-1400T>C	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1378	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304317	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-14 others(5): Show c.-1405G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1383	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304328	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00621.hp1 others(88): Show HG00408.hp1 HG00438.hp1 HG00621.hp1 HG00642.hp1 HG00735.hp2 HG01070.hp2 HG01192.hp2 HG01256.hp2 HG01884.hp1 HG01943.hp1 HG01975.hp2 HG02015.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp1 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03704.hp1 HG03831.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG06807.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18943.hp2 NA18946.hp1 NA18948.hp1 NA18949.hp1 NA18950.hp1 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp1 NA18964.hp1 NA18965.hp2 NA18971.hp2 NA18973.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18986.hp2 NA18988.hp2 NA18990.hp2 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp2 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19058.hp2 NA19063.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19080.hp1 NA19082.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA20300.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0016 others(2): Show a0001c0001 a0001c0015 a0001c0016 a0001c0017 a0001c0020	a0001c0001t0002 a0001c0001t0010 a0001c0001t0020 others(4): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0020 a0001c0015t0002 a0001c0016t0002 a0001c0017t0002 a0001c0020t0002	a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 others(38): Show a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0096 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0010g0032 a0001c0001t0010g0095 a0001c0001t0020g0151 a0001c0015t0002g0106 a0001c0016t0002g0110 a0001c0017t0002g0112 a0001c0020t0002g0118	91	384	0.2370	0	c.-14 others(5): Show c.-1416C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1394	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304370	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	384	0.0026	0	c.-14 others(5): Show c.-1458C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1436	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304442	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0027 a0002c0002t0001g0027	1	384	0.0026	0	c.-15 others(5): Show c.-1530G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1508	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304554	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-16 others(5): Show c.-1642A>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1620	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304555	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03486.hp2 NA18906.hp2 HG03486.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0037 a0001c0001t0002g0037	2	384	0.0052	0	c.-16 others(5): Show c.-1643C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1621	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304666	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp1 HG03130.hp1 HG03486.hp1 others(1): Show HG03098.hp1 HG03130.hp1 HG03486.hp1 NA19030.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0090 a0001c0004t0001g0091 a0001c0004t0001g0092 others(1): Show a0001c0004t0001g0090 a0001c0004t0001g0091 a0001c0004t0001g0092 a0001c0004t0001g0093	4	384	0.0104	0	c.-17 others(5): Show c.-1754G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1732	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74304757	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-18 others(5): Show c.-1845C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	1823	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305153	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-22 others(5): Show c.-2241T>C	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2219	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305174	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-22 others(5): Show c.-2262C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2240	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305201	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-22 others(5): Show c.-2289C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2267	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305223	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp1 HG03130.hp1 HG03486.hp1 others(1): Show HG03098.hp1 HG03130.hp1 HG03486.hp1 NA19030.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0090 a0001c0004t0001g0091 a0001c0004t0001g0092 others(1): Show a0001c0004t0001g0090 a0001c0004t0001g0091 a0001c0004t0001g0092 a0001c0004t0001g0093	4	384	0.0104	0	c.-23 others(5): Show c.-2311A>G	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2289	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305330	C C	CA CA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG01346.hp1 HG01516.hp2 others(33): Show HG01109.hp1 HG01346.hp1 HG01516.hp2 HG02486.hp2 HG02723.hp2 HG02897.hp1 HG03041.hp2 HG03704.hp2 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG04115.hp1 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18959.hp2 NA18966.hp1 NA18977.hp1 NA18981.hp1 NA18982.hp2 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp2 NA19001.hp1 NA19002.hp1 NA19003.hp2 NA19005.hp1 NA19011.hp1 NA19012.hp1 NA19058.hp1 NA19064.hp1 NA19067.hp2 NA19070.hp1	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0021 a0003c0003 others(1): Show a0001c0001 a0001c0021 a0003c0003 a0005c0006	a0001c0001t0001 a0001c0001t0002 a0001c0021t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0021t0001 a0003c0003t0008 a0003c0003t0014 a0005c0006t0001	a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0024 others(25): Show a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0180 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0002g0205 a0001c0021t0001g0186 a0003c0003t0008g0103 a0003c0003t0008g0125 a0003c0003t0008g0127 a0003c0003t0014g0126 a0005c0006t0001g0023	36	384	0.0938	1	c.-24 others(6): Show c.-2419dupT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2397	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305330	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01070.hp1 HG01109.hp2 HG01168.hp2 others(11): Show HG01070.hp1 HG01109.hp2 HG01168.hp2 HG02630.hp2 HG02698.hp1 HG02818.hp2 HG02886.hp1 HG02965.hp2 HG03098.hp2 HG03453.hp1 HG03516.hp1 HG03579.hp1 HG06807.hp2 NA20805.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0007 a0012	a0001c0001 a0002c0009 a0003c0003 others(2): Show a0001c0001 a0002c0009 a0003c0003 a0007c0007 a0012c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0009t0012 a0003c0003t0009 a0003c0003t0011 a0003c0003t0013 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0001c0001t0001g0002 a0001c0001t0002g0116 a0001c0001t0003g0007 others(9): Show a0001c0001t0001g0002 a0001c0001t0002g0116 a0001c0001t0003g0007 a0002c0009t0012g0137 a0003c0003t0009g0033 a0003c0003t0009g0098 a0003c0003t0009g0099 a0003c0003t0011g0156 a0003c0003t0013g0136 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	14	384	0.0365	-1	c.-24 others(6): Show c.-2419delT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2397	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305330	CAAAAA CAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp2 NA18948.hp2 NA18995.hp2 others(5): Show HG02129.hp2 NA18948.hp2 NA18995.hp2 NA19001.hp2 NA19011.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0004 a0002c0002t0001g0074 a0002c0002t0001g0077 others(1): Show a0002c0002t0001g0004 a0002c0002t0001g0074 a0002c0002t0001g0077 a0002c0002t0001g0083	8	384	0.0208	-5	c.-24 others(16): Show c.-2423_-2419delTTTTT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2397	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305330	CAAAAAA CAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00323.hp2 others(90): Show HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00621.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01257.hp1 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01978.hp2 HG01981.hp2 HG02015.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02280.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp1 HG03490.hp1 HG03654.hp1 HG03831.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18943.hp1 NA18946.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18964.hp2 NA18966.hp2 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18994.hp2 NA19000.hp1 NA19007.hp1 NA19010.hp1 NA19012.hp2 NA19055.hp1 NA19067.hp1 NA19070.hp2 NA19078.hp2 NA19090.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0002 a0010 a0011 a0002 a0010 a0011	a0002c0002 a0002c0012 a0010c0014 others(1): Show a0002c0002 a0002c0012 a0010c0014 a0011c0013	a0002c0002t0001 a0002c0002t0024 a0002c0012t0001 others(2): Show a0002c0002t0001 a0002c0002t0024 a0002c0012t0001 a0010c0014t0001 a0011c0013t0001	a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0001g0013 others(47): Show a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0015 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0019 a0002c0002t0001g0026 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0051 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0075 a0002c0002t0001g0076 a0002c0002t0001g0078 a0002c0002t0001g0079 a0002c0002t0001g0080 a0002c0002t0001g0081 a0002c0002t0001g0082 a0002c0002t0001g0084 a0002c0002t0001g0085 a0002c0002t0001g0086 a0002c0002t0001g0087 a0002c0002t0001g0088 a0002c0002t0001g0089 a0002c0002t0001g0206 a0002c0002t0024g0060 a0002c0012t0001g0068 a0010c0014t0001g0065 a0011c0013t0001g0061	93	384	0.2422	-6	c.-24 others(17): Show c.-2424_-2419delTTTTTT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2397	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305346	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00642.hp2 others(18): Show HG00140.hp2 HG00323.hp1 HG00642.hp2 HG00735.hp1 HG00741.hp1 HG01071.hp1 HG01192.hp1 HG01433.hp1 HG01496.hp2 HG02040.hp2 HG02257.hp2 HG02559.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03486.hp1 HG03490.hp2 HG03492.hp2 HG03654.hp2 NA18522.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0008 a0001c0001 a0001c0004 a0001c0008	a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 a0001c0008t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0024 others(12): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0024 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0190 a0001c0001t0002g0120 a0001c0004t0001g0090 a0001c0004t0001g0091 a0001c0004t0001g0092 a0001c0004t0001g0093 a0001c0008t0001g0139 a0001c0008t0001g0140	21	384	0.0547	0	c.-24 others(5): Show c.-2434T>C	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2412	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305390	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0008 a0003c0003t0008	a0003c0003t0008g0134 a0003c0003t0008g0134	1	384	0.0026	0	c.-24 others(5): Show c.-2478G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2456	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305391	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-24 others(5): Show c.-2479C>T	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2457	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305542	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-26 others(5): Show c.-2630T>C	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2608	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305655	A A	AT AT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG01070.hp1 HG01071.hp2 others(6): Show HG00639.hp2 HG01070.hp1 HG01071.hp2 HG01256.hp1 HG01934.hp2 HG01943.hp2 HG02148.hp1 HG02293.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0006 a0001c0001t0003g0007 a0001c0001t0003g0034 others(2): Show a0001c0001t0001g0006 a0001c0001t0003g0007 a0001c0001t0003g0034 a0001c0001t0003g0050 a0001c0001t0003g0097	9	384	0.0234	1	c.-27 others(6): Show c.-2744dupA	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2722	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305698	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00323.hp2 others(101): Show HG00140.hp1 HG00280.hp2 HG00323.hp2 HG00621.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01257.hp1 HG01346.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02135.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02280.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG03209.hp1 HG03490.hp1 HG03654.hp1 HG03831.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04204.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18906.hp1 NA18939.hp2 NA18943.hp1 NA18946.hp2 NA18948.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18954.hp2 NA18959.hp1 NA18960.hp1 NA18964.hp2 NA18966.hp2 NA18967.hp1 NA18970.hp1 NA18971.hp1 NA18982.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19001.hp2 NA19007.hp1 NA19010.hp1 NA19011.hp2 NA19012.hp2 NA19055.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19070.hp2 NA19078.hp2 NA19090.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0011	a0001c0001 a0002c0002 a0002c0012 others(2): Show a0001c0001 a0002c0002 a0002c0012 a0010c0014 a0011c0013	a0001c0001t0006 a0002c0002t0001 a0002c0002t0024 others(3): Show a0001c0001t0006 a0002c0002t0001 a0002c0002t0024 a0002c0012t0001 a0010c0014t0001 a0011c0013t0001	a0001c0001t0006g0008 a0002c0002t0001g0003 a0002c0002t0001g0004 others(53): Show a0001c0001t0006g0008 a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0015 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0019 a0002c0002t0001g0026 a0002c0002t0001g0027 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0051 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0055 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0064 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0002t0001g0075 a0002c0002t0001g0076 a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0001g0079 a0002c0002t0001g0080 a0002c0002t0001g0081 a0002c0002t0001g0082 a0002c0002t0001g0083 a0002c0002t0001g0084 a0002c0002t0001g0085 a0002c0002t0001g0086 a0002c0002t0001g0087 a0002c0002t0001g0088 a0002c0002t0001g0089 a0002c0002t0001g0206 a0002c0002t0024g0060 a0002c0012t0001g0068 a0010c0014t0001g0065 a0011c0013t0001g0061	104	384	0.2708	0	c.-27 others(5): Show c.-2786G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2764	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305819	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00621.hp1 others(88): Show HG00408.hp1 HG00438.hp1 HG00621.hp1 HG00642.hp1 HG00735.hp2 HG01070.hp2 HG01192.hp2 HG01256.hp2 HG01884.hp1 HG01943.hp1 HG01975.hp2 HG02015.hp2 HG02040.hp1 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02083.hp2 HG02132.hp2 HG02145.hp1 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03704.hp1 HG03831.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG06807.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18943.hp2 NA18946.hp1 NA18948.hp1 NA18949.hp1 NA18950.hp1 NA18951.hp2 NA18952.hp2 NA18954.hp1 NA18960.hp2 NA18963.hp1 NA18964.hp1 NA18965.hp2 NA18971.hp2 NA18973.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18986.hp2 NA18988.hp2 NA18990.hp2 NA18997.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp2 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19058.hp2 NA19063.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19080.hp1 NA19082.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA20300.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0016 others(2): Show a0001c0001 a0001c0015 a0001c0016 a0001c0017 a0001c0020	a0001c0001t0002 a0001c0001t0010 a0001c0001t0020 others(4): Show a0001c0001t0002 a0001c0001t0010 a0001c0001t0020 a0001c0015t0002 a0001c0016t0002 a0001c0017t0002 a0001c0020t0002	a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 others(38): Show a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0096 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0150 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0010g0032 a0001c0001t0010g0095 a0001c0001t0020g0151 a0001c0015t0002g0106 a0001c0016t0002g0110 a0001c0017t0002g0112 a0001c0020t0002g0118	91	384	0.2370	0	c.-29 others(5): Show c.-2907G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2885	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74305867	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0040	1	384	0.0026	0	c.-29 others(5): Show c.-2955G>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	2933	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306068	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-31 others(5): Show c.-3156T>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3134	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306112	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0040 a0001c0001t0001g0040	1	384	0.0026	0	c.-32 others(5): Show c.-3200A>G	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3178	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306139	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0080 a0002c0002t0001g0080	1	384	0.0026	0	c.-32 others(5): Show c.-3227T>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3205	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306145	C C	CAT CAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp1 HG01433.hp1 HG02300.hp1 others(2): Show HG00735.hp1 HG01433.hp1 HG02300.hp1 HG03490.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0024 a0001c0001t0001g0043 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0024 a0001c0001t0001g0043 a0001c0001t0001g0172	5	384	0.0130	2	c.-32 others(13): Show c.-3235_-3234dupAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3212	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306145	C C	CATAT CATAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG01361.hp2 HG02602.hp1 others(3): Show HG00140.hp2 HG01361.hp2 HG02602.hp1 HG03688.hp1 HG03688.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0021 a0001c0001t0001 a0001c0001t0021	a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0001g0158 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0024 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0021g0157	6	384	0.0156	4	c.-32 others(15): Show c.-3237_-3234dupATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3212	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306145	CAT CAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG01109.hp1 HG02083.hp1 others(12): Show HG00639.hp1 HG01109.hp1 HG02083.hp1 HG02280.hp2 HG02698.hp2 NA18947.hp1 NA18947.hp2 NA18972.hp2 NA18984.hp1 NA19007.hp2 NA19056.hp2 NA19063.hp1 NA19074.hp2 NA19079.hp2 NA20905.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0018 a0001c0001 a0008c0018	a0001c0001t0001 a0008c0018t0001 a0001c0001t0001 a0008c0018t0001	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0012 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0025 a0001c0001t0001g0044 a0001c0001t0001g0179 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0195 a0008c0018t0001g0182	15	384	0.0391	-2	c.-32 others(13): Show c.-3235_-3234delAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3212	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306145	CATAT CATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG01243.hp1 HG01346.hp1 others(47): Show HG00280.hp1 HG01243.hp1 HG01346.hp1 HG02071.hp1 HG02132.hp2 HG02258.hp2 HG02486.hp2 HG02622.hp1 HG02630.hp1 HG02723.hp2 HG02895.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03195.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03540.hp1 HG03927.hp1 HG03927.hp2 NA18959.hp2 NA18965.hp2 NA18966.hp1 NA18971.hp2 NA18977.hp1 NA18981.hp1 NA18982.hp2 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp2 NA19001.hp1 NA19002.hp1 NA19003.hp2 NA19005.hp1 NA19011.hp1 NA19012.hp1 NA19030.hp1 NA19058.hp2 NA19064.hp1 NA19067.hp2 NA19070.hp1 NA19240.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0002c0009 others(1): Show a0001c0001 a0001c0004 a0002c0009 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0022 a0001c0004t0001 a0002c0009t0012 a0003c0003t0008 a0003c0003t0014	a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0024 others(34): Show a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0041 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0178 a0001c0001t0001g0184 a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0002g0001 a0001c0001t0002g0035 a0001c0001t0002g0205 a0001c0001t0004g0009 a0001c0001t0004g0197 a0001c0001t0004g0200 a0001c0001t0004g0201 a0001c0001t0004g0203 a0001c0001t0004g0204 a0001c0001t0007g0045 a0001c0001t0022g0202 a0001c0004t0001g0090 a0001c0004t0001g0091 a0001c0004t0001g0092 a0001c0004t0001g0093 a0002c0009t0012g0137 a0002c0009t0012g0138 a0003c0003t0008g0125 a0003c0003t0008g0127 a0003c0003t0014g0126	50	384	0.1302	-4	c.-32 others(15): Show c.-3237_-3234delATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3212	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306145	CATATAT CATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG01070.hp2 others(22): Show HG00323.hp2 HG00408.hp1 HG01070.hp2 HG01358.hp1 HG01884.hp2 HG02738.hp2 HG02970.hp2 HG03486.hp2 HG03516.hp2 HG03831.hp2 HG03834.hp1 HG03942.hp2 HG04115.hp2 HG04204.hp1 NA18950.hp1 NA18951.hp2 NA18978.hp1 NA18997.hp2 NA18999.hp1 NA19043.hp2 NA19056.hp1 NA19085.hp1 NA19090.hp1 NA20805.hp1 NA21309.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0020 a0002c0002 others(1): Show a0001c0001 a0001c0020 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0020 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0020 a0001c0020t0002 a0002c0002t0001 a0003c0003t0016	a0001c0001t0001g0040 a0001c0001t0002g0001 a0001c0001t0002g0010 others(17): Show a0001c0001t0001g0040 a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0108 a0001c0001t0002g0115 a0001c0001t0002g0122 a0001c0001t0002g0130 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0153 a0001c0001t0020g0151 a0001c0020t0002g0118 a0002c0002t0001g0003 a0002c0002t0001g0028 a0002c0002t0001g0080 a0002c0002t0001g0086 a0003c0003t0016g0100	25	384	0.0651	-6	c.-32 others(17): Show c.-3239_-3234delATATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3212	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306145	CATATATA others(1): Show CATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00639.hp2 HG01070.hp1 others(39): Show HG00438.hp2 HG00639.hp2 HG01070.hp1 HG01071.hp2 HG01167.hp2 HG01169.hp2 HG01256.hp1 HG01934.hp2 HG01943.hp2 HG01978.hp2 HG02056.hp2 HG02145.hp1 HG02148.hp1 HG02293.hp1 HG02559.hp2 HG02572.hp2 HG02698.hp1 HG02717.hp2 HG02818.hp1 HG02886.hp2 HG02922.hp1 HG02976.hp2 HG03834.hp2 HG04199.hp1 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp2 NA18949.hp1 NA18951.hp1 NA18953.hp1 NA18960.hp1 NA18964.hp1 NA18971.hp1 NA18981.hp2 NA19000.hp1 NA19007.hp1 NA19063.hp2 NA19077.hp1 NA19080.hp1 NA19086.hp1 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0002c0002t0001	a0001c0001t0002g0001 a0001c0001t0002g0101 a0001c0001t0002g0113 others(16): Show a0001c0001t0002g0001 a0001c0001t0002g0101 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0002g0129 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0003g0007 a0001c0001t0003g0034 a0001c0001t0003g0050 a0001c0001t0003g0097 a0001c0001t0010g0032 a0001c0001t0010g0095 a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0001g0026 a0002c0002t0001g0063 a0002c0002t0001g0081 a0002c0002t0001g0089	42	384	0.1094	-8	c.-32 others(19): Show c.-3241_-3234delATATATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3212	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306147	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp2 HG01243.hp2 HG02451.hp1 others(8): Show HG01081.hp2 HG01243.hp2 HG02451.hp1 HG02615.hp2 HG02622.hp2 HG02717.hp1 HG02970.hp1 HG03209.hp2 HG03471.hp1 HG03540.hp2 NA21309.hp2	a0003 a0004 a0003 a0004	a0003c0003 a0004c0005 a0003c0003 a0004c0005	a0003c0003t0005 a0003c0003t0008 a0003c0003t0015 others(1): Show a0003c0003t0005 a0003c0003t0008 a0003c0003t0015 a0004c0005t0005	a0003c0003t0005g0020 a0003c0003t0005g0131 a0003c0003t0005g0132 others(3): Show a0003c0003t0005g0020 a0003c0003t0005g0131 a0003c0003t0005g0132 a0003c0003t0008g0134 a0003c0003t0015g0133 a0004c0005t0005g0011	11	384	0.0287	0	c.-32 others(5): Show c.-3235A>G	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3213	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306149	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp2 HG02818.hp2 HG03098.hp2 others(1): Show HG02630.hp2 HG02818.hp2 HG03098.hp2 HG06807.hp2	a0003 a0007 a0012 a0003 a0007 a0012	a0003c0003 a0007c0007 a0012c0011 a0003c0003 a0007c0007 a0012c0011	a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 others(1): Show a0003c0003t0011 a0007c0007t0011 a0007c0007t0023 a0012c0011t0002	a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 others(1): Show a0003c0003t0011g0156 a0007c0007t0011g0049 a0007c0007t0023g0048 a0012c0011t0002g0047	4	384	0.0104	0	c.-32 others(5): Show c.-3237A>G	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3215	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306157	TATATA TATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01192.hp2 HG03041.hp1 HG03139.hp2 others(2): Show HG01192.hp2 HG03041.hp1 HG03139.hp2 NA19055.hp2 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0121 others(1): Show a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0121 a0001c0001t0002g0150	5	384	0.0130	-5	c.-32 others(16): Show c.-3250_-3246delTATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3224	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306157	TATATATA TATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG01256.hp2 HG01884.hp1 others(15): Show HG00438.hp1 HG01256.hp2 HG01884.hp1 HG02040.hp1 HG02074.hp1 HG02083.hp2 HG02809.hp1 HG03704.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18948.hp1 NA18954.hp1 NA18960.hp2 NA18963.hp1 NA18977.hp2 NA18999.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0017 a0001c0001 a0001c0017	a0001c0001t0002 a0001c0017t0002 a0001c0001t0002 a0001c0017t0002	a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 others(6): Show a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0035 a0001c0001t0002g0037 a0001c0001t0002g0102 a0001c0001t0002g0107 a0001c0001t0002g0119 a0001c0017t0002g0112	18	384	0.0469	-7	c.-32 others(18): Show c.-3252_-3246delTATATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3224	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306159	TATATA TATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp2 NA18939.hp1 NA19079.hp1 HG02015.hp2 NA18939.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0038 a0001c0001t0002g0104 a0001c0001t0002g0001 a0001c0001t0002g0038 a0001c0001t0002g0104	3	384	0.0078	-5	c.-32 others(16): Show c.-3252_-3248delTATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3226	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306159	TATATATA TATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp1 HG00642.hp1 HG00735.hp2 others(17): Show HG00621.hp1 HG00642.hp1 HG00735.hp2 HG02647.hp1 HG03195.hp1 HG03491.hp2 NA18943.hp2 NA18946.hp1 NA18952.hp2 NA18973.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp2 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19082.hp2 NA19088.hp1 NA19088.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0015 a0001c0016 a0001c0001 a0001c0015 a0001c0016	a0001c0001t0002 a0001c0015t0002 a0001c0016t0002 a0001c0001t0002 a0001c0015t0002 a0001c0016t0002	a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 others(10): Show a0001c0001t0002g0001 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0096 a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0114 a0001c0001t0002g0117 a0001c0001t0002g0120 a0001c0001t0002g0144 a0001c0001t0002g0152 a0001c0015t0002g0106 a0001c0016t0002g0110	20	384	0.0521	-7	c.-32 others(18): Show c.-3254_-3248delTATATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3226	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306160	ATATATAT others(6): Show ATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG02135.hp2 NA18953.hp2 others(12): Show HG00408.hp2 HG02135.hp2 NA18953.hp2 NA18963.hp2 NA18965.hp1 NA18967.hp2 NA18972.hp1 NA18973.hp2 NA19003.hp1 NA19010.hp2 NA19074.hp1 NA19077.hp2 NA19082.hp1 NA19084.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0094 a0001c0001t0001g0135 others(4): Show a0001c0001t0001g0005 a0001c0001t0001g0094 a0001c0001t0001g0135 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149	15	384	0.0391	-13	c.-32 others(24): Show c.-3261_-3249delATATATATATATA	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3227	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306162	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01943.hp1 HG01975.hp2 NA18965.hp2 others(2): Show HG01943.hp1 HG01975.hp2 NA18965.hp2 NA18971.hp2 NA19058.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0035 a0001c0001t0002g0001 a0001c0001t0002g0035	5	384	0.0130	0	c.-32 others(5): Show c.-3250T>A	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3228	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306162	ATATATAT others(6): Show ATATATATATATTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0013 a0003c0003t0013	a0003c0003t0013g0136 a0003c0003t0013g0136	1	384	0.0026	-13	c.-32 others(24): Show c.-3263_-3251delAAATATATATATA	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3229	chr14	TogoVar
ABCD4_chr14_74280269_74307934	74306163	TATATATA TATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02683.hp1 HG03579.hp2 NA18949.hp2 HG02683.hp1 HG03579.hp2 NA18949.hp2	a0001 a0003 a0010 a0001 a0003 a0010	a0001c0001 a0003c0003 a0010c0014 a0001c0001 a0003c0003 a0010c0014	a0001c0001t0003 a0003c0003t0019 a0010c0014t0001 a0001c0001t0003 a0003c0003t0019 a0010c0014t0001	a0001c0001t0003g0141 a0003c0003t0019g0128 a0010c0014t0001g0065 a0001c0001t0003g0141 a0003c0003t0019g0128 a0010c0014t0001g0065	3	384	0.0078	-7	c.-32 others(18): Show c.-3258_-3252delTATATAT	ABCD4	ENSG00000119688.21	transcript	ENST00000356924.9	protein_coding	3230	chr14	TogoVar

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