Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CHRNA2_chr8_27454756_27484261	27479109	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0055 a0003c0003t0055	a0003c0003t0055g0271 a0003c0003t0055g0271	1	458	0.0022	0	c.-42 others(4): Show c.-422G>A	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8051		chr8	TogoVar
CHRNA2_chr8_27454756_27484261	27479111	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00323.hp1 HG01515.hp1 HG02145.hp2 others(2): Show HG00323.hp1 HG01515.hp1 HG02145.hp2 NA18747.hp1 NA19058.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0020 a0002c0002t0053 a0002c0002t0054 a0002c0002t0020 a0002c0002t0053 a0002c0002t0054	a0002c0002t0020g0267 a0002c0002t0020g0268 a0002c0002t0020g0269 others(2): Show a0002c0002t0020g0267 a0002c0002t0020g0268 a0002c0002t0020g0269 a0002c0002t0053g0266 a0002c0002t0054g0270	5	458	0.0109	0	c.-42 others(4): Show c.-424C>T	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8053		chr8	TogoVar
CHRNA2_chr8_27454756_27484261	27479134	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00741.hp1 HG02735.hp1 HG03654.hp1 others(1): Show HG00741.hp1 HG02735.hp1 HG03654.hp1 HG03834.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0038 a0002c0002t0018 a0001c0001t0038 a0002c0002t0018	a0001c0001t0038g0088 a0002c0002t0018g0085 a0002c0002t0018g0086 others(1): Show a0001c0001t0038g0088 a0002c0002t0018g0085 a0002c0002t0018g0086 a0002c0002t0018g0087	4	458	0.0087	0	c.-44 others(4): Show c.-447T>A	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8076		chr8	TogoVar
CHRNA2_chr8_27454756_27484261	27479135	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02572.hp1 HG02809.hp2 others(10): Show HG02486.hp2 HG02572.hp1 HG02809.hp2 HG02895.hp1 HG02896.hp2 HG03041.hp2 HG03098.hp2 HG03225.hp1 HG04115.hp1 HG06807.hp2 NA19002.hp1 NA19030.hp1 NA19090.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0005 a0001c0001 a0002c0002 a0003c0005	a0001c0001t0011 a0001c0001t0017 a0001c0001t0035 others(3): Show a0001c0001t0011 a0001c0001t0017 a0001c0001t0035 a0002c0002t0017 a0002c0002t0036 a0003c0005t0037	a0001c0001t0011g0012 a0001c0001t0011g0032 a0001c0001t0017g0033 others(4): Show a0001c0001t0011g0012 a0001c0001t0011g0032 a0001c0001t0017g0033 a0001c0001t0035g0084 a0002c0002t0017g0082 a0002c0002t0036g0081 a0003c0005t0037g0083	13	458	0.0284	0	c.-44 others(4): Show c.-448G>A	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8077		chr8	TogoVar
CHRNA2_chr8_27454756_27484261	27479248	T T	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00738.hp2 HG01243.hp1 HG01884.hp2 others(22): Show HG00738.hp2 HG01243.hp1 HG01884.hp2 HG02145.hp1 HG02258.hp1 HG02280.hp2 HG02572.hp2 HG02622.hp1 HG02647.hp1 HG02723.hp1 HG02809.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02976.hp1 HG03041.hp1 HG03486.hp1 HG03516.hp1 HG03579.hp1 HG06807.hp1 NA18522.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp2 NA21309.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0006	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0003c0005 a0005c0013 a0006c0011	a0001c0001t0010 a0001c0001t0027 a0001c0001t0057 others(10): Show a0001c0001t0010 a0001c0001t0027 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0002c0002t0021 a0003c0003t0010 a0003c0003t0014 a0003c0003t0055 a0003c0005t0010 a0005c0013t0056 a0006c0011t0010	a0001c0001t0010g0061 a0001c0001t0010g0062 a0001c0001t0010g0275 others(15): Show a0001c0001t0010g0061 a0001c0001t0010g0062 a0001c0001t0010g0275 a0001c0001t0010g0280 a0001c0001t0027g0060 a0001c0001t0057g0281 a0001c0001t0058g0279 a0001c0001t0059g0278 a0001c0001t0060g0277 a0002c0002t0021g0059 a0002c0002t0021g0274 a0003c0003t0010g0282 a0003c0003t0014g0023 a0003c0003t0014g0273 a0003c0003t0055g0271 a0003c0005t0010g0276 a0005c0013t0056g0272 a0006c0011t0010g0283	25	458	0.0546	0	c.-56 others(4): Show c.-561A>T	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8190		chr8	TogoVar
CHRNA2_chr8_27454756_27484261	27479250	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00558.hp2 others(50): Show HG00099.hp1 HG00099.hp2 HG00558.hp2 HG00642.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01255.hp2 HG01257.hp1 HG01346.hp1 HG01358.hp2 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01928.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02523.hp1 HG02602.hp2 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03492.hp2 HG03704.hp2 HG03710.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18948.hp1 NA18990.hp2 NA18998.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp2 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19070.hp2 NA19091.hp2 NA20752.hp2 NA20805.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0007 a0001c0012 others(2): Show a0001c0001 a0001c0007 a0001c0012 a0002c0002 a0003c0003	a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 others(12): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0015 a0001c0001t0030 a0001c0001t0033 a0001c0001t0034 a0001c0007t0006 a0001c0012t0031 a0002c0002t0016 a0002c0002t0028 a0002c0002t0032 a0003c0003t0007 a0003c0003t0015 a0003c0003t0029	a0001c0001t0005g0009 a0001c0001t0005g0030 a0001c0001t0005g0070 others(23): Show a0001c0001t0005g0009 a0001c0001t0005g0030 a0001c0001t0005g0070 a0001c0001t0005g0073 a0001c0001t0005g0075 a0001c0001t0005g0078 a0001c0001t0006g0007 a0001c0001t0006g0029 a0001c0001t0006g0064 a0001c0001t0013g0024 a0001c0001t0013g0031 a0001c0001t0015g0068 a0001c0001t0015g0071 a0001c0001t0015g0077 a0001c0001t0030g0074 a0001c0001t0033g0080 a0001c0001t0034g0079 a0001c0007t0006g0065 a0001c0012t0031g0076 a0002c0002t0016g0013 a0002c0002t0028g0063 a0002c0002t0032g0072 a0003c0003t0007g0005 a0003c0003t0007g0067 a0003c0003t0015g0069 a0003c0003t0029g0066	53	458	0.1157	0	c.-56 others(4): Show c.-563T>A	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8192		chr8	TogoVar
CHRNA2_chr8_27454756_27484261	27479252	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00642.hp2 others(10): Show HG00099.hp1 HG00099.hp2 HG00642.hp2 HG00741.hp2 HG01069.hp1 HG01071.hp2 HG01074.hp1 HG01255.hp2 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03704.hp2 NA20752.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0007 a0002c0002 others(1): Show a0001c0001 a0001c0007 a0002c0002 a0003c0003	a0001c0001t0006 a0001c0007t0006 a0002c0002t0028 others(1): Show a0001c0001t0006 a0001c0007t0006 a0002c0002t0028 a0003c0003t0029	a0001c0001t0006g0007 a0001c0001t0006g0029 a0001c0001t0006g0064 others(3): Show a0001c0001t0006g0007 a0001c0001t0006g0029 a0001c0001t0006g0064 a0001c0007t0006g0065 a0002c0002t0028g0063 a0003c0003t0029g0066	13	458	0.0284	0	c.-56 others(4): Show c.-565T>A	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8194		chr8	TogoVar
CHRNA2_chr8_27454756_27484261	27479259	CACACAT CACACAT	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00558.hp2 others(44): Show HG00099.hp1 HG00099.hp2 HG00558.hp2 HG00642.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp1 HG01255.hp2 HG01257.hp1 HG01346.hp1 HG01358.hp2 HG01361.hp2 HG01496.hp1 HG01884.hp1 HG01928.hp1 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02523.hp1 HG03239.hp1 HG03490.hp1 HG03492.hp1 HG03492.hp2 HG03704.hp2 HG03710.hp1 NA18939.hp1 NA18948.hp1 NA19000.hp1 NA19004.hp1 NA19005.hp2 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19070.hp2 NA20752.hp2 NA20805.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0007 a0001c0012 others(2): Show a0001c0001 a0001c0007 a0001c0012 a0002c0002 a0003c0003	a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 others(9): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0013 a0001c0001t0015 a0001c0001t0030 a0001c0007t0006 a0001c0012t0031 a0002c0002t0028 a0002c0002t0032 a0003c0003t0007 a0003c0003t0015 a0003c0003t0029	a0001c0001t0005g0009 a0001c0001t0005g0030 a0001c0001t0005g0070 others(20): Show a0001c0001t0005g0009 a0001c0001t0005g0030 a0001c0001t0005g0070 a0001c0001t0005g0073 a0001c0001t0005g0075 a0001c0001t0005g0078 a0001c0001t0006g0007 a0001c0001t0006g0029 a0001c0001t0006g0064 a0001c0001t0013g0024 a0001c0001t0013g0031 a0001c0001t0015g0068 a0001c0001t0015g0071 a0001c0001t0015g0077 a0001c0001t0030g0074 a0001c0007t0006g0065 a0001c0012t0031g0076 a0002c0002t0028g0063 a0002c0002t0032g0072 a0003c0003t0007g0005 a0003c0003t0007g0067 a0003c0003t0015g0069 a0003c0003t0029g0066	47	458	0.1026	-6	c.-57 others(15): Show c.-578_-573delATGTGT	CHRNA2	ENSG00000120903.13	transcript	ENST00000407991.3	protein_coding	1/7	8202		chr8	TogoVar
CHRNA3_chr15_78590309_78625996	78620865	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01891.hp1 HG02572.hp2 HG02886.hp2 others(9): Show HG01891.hp1 HG02572.hp2 HG02886.hp2 HG02895.hp1 HG02965.hp2 HG03130.hp2 HG03139.hp2 HG03225.hp2 HG03486.hp1 HG03540.hp1 NA19043.hp2 NA20129.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0007 a0001c0006t0014 a0001c0006t0007 a0001c0006t0014	a0001c0006t0007g0006 a0001c0006t0007g0018 a0001c0006t0007g0053 others(5): Show a0001c0006t0007g0006 a0001c0006t0007g0018 a0001c0006t0007g0053 a0001c0006t0007g0054 a0001c0006t0007g0055 a0001c0006t0007g0056 a0001c0006t0007g0058 a0001c0006t0014g0057	12	410	0.0293	0	c.-71 others(3): Show c.-71G>A	CHRNA3	ENSG00000080644.16	transcript	ENST00000326828.6	protein_coding	1/6	71		chr15	TogoVar
CHRNA3_chr15_78590309_78625996	78620974	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0025 a0001c0003t0025	a0001c0003t0025g0297 a0001c0003t0025g0297	1	410	0.0024	0	c.-18 others(4): Show c.-180C>T	CHRNA3	ENSG00000080644.16	transcript	ENST00000326828.6	protein_coding	1/6	180		chr15	TogoVar
CHRNA4_chr20_63338223_63366349	63361195	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00323.hp1 others(84): Show HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00597.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01934.hp1 HG01943.hp1 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02040.hp1 HG02056.hp1 HG02056.hp2 HG02080.hp2 HG02129.hp1 HG02135.hp1 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02896.hp2 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03669.hp2 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18945.hp2 NA18971.hp1 NA18971.hp2 NA19007.hp2 NA19010.hp1 NA19043.hp1 NA19064.hp1 NA19066.hp1 NA20129.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1	a0000 a0001 a0004 a0000 a0001 a0004	a0000c0006 a0001c0001 a0001c0002 others(9): Show a0000c0006 a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0008 a0001c0009 a0001c0011 a0001c0013 a0001c0016 a0004c0010	a0000c0006t0004 a0000c0006t0006 a0000c0006t0028 others(26): Show a0000c0006t0004 a0000c0006t0006 a0000c0006t0028 a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0001t0027 a0001c0002t0001 a0001c0002t0004 a0001c0002t0024 a0001c0002t0025 a0001c0002t0026 a0001c0004t0021 a0001c0004t0037 a0001c0005t0001 a0001c0005t0004 a0001c0007t0008 a0001c0007t0022 a0001c0007t0023 a0001c0008t0001 a0001c0009t0008 a0001c0011t0006 a0001c0013t0012 a0001c0016t0001 a0004c0010t0008	a0000c0006t0004g0095 a0000c0006t0006g0093 a0000c0006t0028g0079 others(74): Show a0000c0006t0004g0095 a0000c0006t0006g0093 a0000c0006t0028g0079 a0001c0001t0001g0066 a0001c0001t0001g0074 a0001c0001t0004g0005 a0001c0001t0004g0011 a0001c0001t0004g0080 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0004g0085 a0001c0001t0004g0087 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0006g0051 a0001c0001t0006g0077 a0001c0001t0006g0100 a0001c0001t0006g0101 a0001c0001t0009g0044 a0001c0001t0009g0045 a0001c0001t0009g0082 a0001c0001t0012g0043 a0001c0001t0019g0031 a0001c0001t0020g0092 a0001c0001t0027g0086 a0001c0002t0001g0001 a0001c0002t0001g0010 a0001c0002t0001g0039 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0052 a0001c0002t0001g0053 a0001c0002t0001g0054 a0001c0002t0001g0056 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0068 a0001c0002t0001g0069 a0001c0002t0001g0070 a0001c0002t0001g0071 a0001c0002t0001g0075 a0001c0002t0001g0076 a0001c0002t0001g0081 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0004g0049 a0001c0002t0024g0102 a0001c0002t0025g0096 a0001c0002t0026g0067 a0001c0004t0021g0094 a0001c0004t0037g0145 a0001c0005t0001g0064 a0001c0005t0001g0065 a0001c0005t0001g0072 a0001c0005t0004g0055 a0001c0005t0004g0059 a0001c0007t0008g0035 a0001c0007t0008g0037 a0001c0007t0022g0033 a0001c0007t0023g0034 a0001c0008t0001g0009 a0001c0008t0001g0038 a0001c0009t0008g0036 a0001c0011t0006g0073 a0001c0013t0012g0078 a0001c0016t0001g0040 a0004c0010t0008g0046	87	168	0.5179	0	c.-30 others(3): Show c.-30C>G	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	1/6	30		chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63361321	GGCGCGGC others(29): Show GGCGCGGCAGGGAGCGCCGGGCTGTGGGCTCCGTGGC	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0000 a0000	a0000c0006 a0000c0006	a0000c0006t0015 a0000c0006t0015	a0000c0006t0015g0032 a0000c0006t0015g0032	1	168	0.0060	-36	c.-19 others(45): Show c.-192_-157delGCCACGGAGCCCACAGCCCGGCGCTCCCTGCCGCGC	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	1/6	157		chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63361347	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00323.hp1 others(82): Show HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00597.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01934.hp1 HG01943.hp1 HG01975.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02040.hp1 HG02056.hp1 HG02056.hp2 HG02080.hp2 HG02129.hp1 HG02135.hp1 HG02486.hp1 HG02486.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02896.hp2 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03471.hp1 HG03471.hp2 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03669.hp2 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18945.hp2 NA18971.hp1 NA18971.hp2 NA19007.hp2 NA19010.hp1 NA19043.hp1 NA19064.hp1 NA19066.hp1 NA20129.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp1	a0000 a0001 a0004 a0000 a0001 a0004	a0000c0006 a0001c0001 a0001c0002 others(9): Show a0000c0006 a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0008 a0001c0009 a0001c0011 a0001c0013 a0001c0016 a0004c0010	a0000c0006t0004 a0000c0006t0006 a0000c0006t0028 others(24): Show a0000c0006t0004 a0000c0006t0006 a0000c0006t0028 a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0001c0001t0020 a0001c0001t0027 a0001c0002t0001 a0001c0002t0004 a0001c0002t0024 a0001c0002t0025 a0001c0002t0026 a0001c0004t0021 a0001c0005t0001 a0001c0005t0004 a0001c0007t0008 a0001c0007t0022 a0001c0007t0023 a0001c0008t0001 a0001c0009t0008 a0001c0011t0006 a0001c0013t0012 a0001c0016t0001 a0004c0010t0008	a0000c0006t0004g0095 a0000c0006t0006g0093 a0000c0006t0028g0079 others(72): Show a0000c0006t0004g0095 a0000c0006t0006g0093 a0000c0006t0028g0079 a0001c0001t0001g0066 a0001c0001t0001g0074 a0001c0001t0004g0005 a0001c0001t0004g0011 a0001c0001t0004g0080 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0004g0085 a0001c0001t0004g0087 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0006g0051 a0001c0001t0006g0077 a0001c0001t0006g0100 a0001c0001t0006g0101 a0001c0001t0009g0044 a0001c0001t0009g0045 a0001c0001t0009g0082 a0001c0001t0012g0043 a0001c0001t0020g0092 a0001c0001t0027g0086 a0001c0002t0001g0001 a0001c0002t0001g0010 a0001c0002t0001g0039 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0050 a0001c0002t0001g0052 a0001c0002t0001g0053 a0001c0002t0001g0054 a0001c0002t0001g0056 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0068 a0001c0002t0001g0069 a0001c0002t0001g0070 a0001c0002t0001g0071 a0001c0002t0001g0075 a0001c0002t0001g0076 a0001c0002t0001g0081 a0001c0002t0001g0097 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0004g0049 a0001c0002t0024g0102 a0001c0002t0025g0096 a0001c0002t0026g0067 a0001c0004t0021g0094 a0001c0005t0001g0064 a0001c0005t0001g0065 a0001c0005t0001g0072 a0001c0005t0004g0055 a0001c0005t0004g0059 a0001c0007t0008g0035 a0001c0007t0008g0037 a0001c0007t0022g0033 a0001c0007t0023g0034 a0001c0008t0001g0009 a0001c0008t0001g0038 a0001c0009t0008g0036 a0001c0011t0006g0073 a0001c0013t0012g0078 a0001c0016t0001g0040 a0004c0010t0008g0046	85	168	0.5060	0	c.-18 others(4): Show c.-182C>T	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	1/6	182		chr20	TogoVar
CHRNA4_chr20_63338223_63366349	63361348	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00323.hp2 HG00423.hp1 HG00423.hp2 others(47): Show HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG01192.hp1 HG01258.hp1 HG01934.hp2 HG01943.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02080.hp1 HG02129.hp2 HG02135.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02622.hp1 HG02630.hp2 HG02698.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp2 HG03239.hp2 HG03492.hp1 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG04115.hp1 HG04204.hp2 HG04228.hp2 NA18612.hp2 NA18747.hp2 NA18945.hp1 NA18970.hp1 NA18970.hp2 NA19007.hp1 NA19010.hp2 NA19043.hp2 NA19064.hp2 NA19066.hp2 NA19088.hp1 NA19088.hp2 homoSapiens_chm13v2.hp1	a0000 a0001 a0002 a0000 a0001 a0002	a0000c0006 a0000c0017 a0001c0001 others(4): Show a0000c0006 a0000c0017 a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0002c0012	a0000c0006t0003 a0000c0017t0007 a0001c0001t0003 others(15): Show a0000c0006t0003 a0000c0017t0007 a0001c0001t0003 a0001c0001t0013 a0001c0001t0014 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0003t0005 a0001c0003t0036 a0001c0004t0005 a0001c0004t0007 a0001c0004t0037 a0001c0005t0031 a0002c0012t0003	a0000c0006t0003g0109 a0000c0017t0007g0104 a0001c0001t0003g0006 others(43): Show a0000c0006t0003g0109 a0000c0017t0007g0104 a0001c0001t0003g0006 a0001c0001t0003g0107 a0001c0001t0003g0108 a0001c0001t0003g0110 a0001c0001t0003g0111 a0001c0001t0003g0113 a0001c0001t0003g0115 a0001c0001t0003g0118 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0123 a0001c0001t0003g0125 a0001c0001t0003g0126 a0001c0001t0003g0132 a0001c0001t0003g0140 a0001c0001t0003g0141 a0001c0001t0013g0105 a0001c0001t0013g0130 a0001c0001t0014g0128 a0001c0001t0014g0129 a0001c0001t0029g0124 a0001c0001t0030g0114 a0001c0001t0032g0116 a0001c0001t0033g0112 a0001c0001t0034g0131 a0001c0001t0035g0117 a0001c0003t0005g0127 a0001c0003t0036g0133 a0001c0004t0005g0012 a0001c0004t0005g0013 a0001c0004t0005g0106 a0001c0004t0005g0136 a0001c0004t0005g0137 a0001c0004t0005g0139 a0001c0004t0005g0144 a0001c0004t0007g0103 a0001c0004t0007g0134 a0001c0004t0007g0135 a0001c0004t0007g0142 a0001c0004t0007g0143 a0001c0004t0037g0145 a0001c0005t0031g0138 a0002c0012t0003g0119	50	168	0.2976	0	c.-18 others(4): Show c.-183C>T	CHRNA4	ENSG00000101204.18	transcript	ENST00000370263.9	protein_coding	1/6	183		chr20	TogoVar
CHRNA5_chr15_78560520_78600269	78565554	T T	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00408.hp2 others(158): Show HG00099.hp2 HG00280.hp1 HG00408.hp2 HG00423.hp1 HG00558.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp2 HG01070.hp1 HG01074.hp1 HG01099.hp1 HG01167.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01516.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02071.hp2 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp2 HG02300.hp1 HG02300.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02683.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02818.hp2 HG02896.hp1 HG02897.hp1 HG02976.hp1 HG03130.hp2 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18963.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp2 NA18974.hp2 NA18977.hp2 NA18980.hp2 NA18981.hp2 NA18983.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19003.hp2 NA19004.hp2 NA19005.hp2 NA19009.hp1 NA19009.hp2 NA19012.hp1 NA19030.hp2 NA19054.hp2 NA19056.hp1 NA19057.hp2 NA19060.hp2 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19072.hp2 NA19074.hp1 NA19078.hp1 NA19079.hp1 NA19081.hp1 NA19083.hp2 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0007 a0002c0002 a0001c0001 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0001t0006 a0001c0001t0015 others(5): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0015 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0007t0001 a0002c0002t0025	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0012 others(140): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0132 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0006g0083 a0001c0001t0006g0085 a0001c0001t0006g0097 a0001c0001t0006g0102 a0001c0001t0006g0108 a0001c0001t0006g0119 a0001c0001t0006g0120 a0001c0001t0006g0124 a0001c0001t0006g0134 a0001c0001t0006g0146 a0001c0001t0006g0147 a0001c0001t0006g0248 a0001c0001t0006g0262 a0001c0001t0015g0275 a0001c0001t0015g0276 a0001c0001t0022g0015 a0001c0001t0023g0245 a0001c0001t0024g0105 a0001c0007t0001g0131 a0002c0002t0025g0293	161	382	0.4215	0	c.-16 others(4): Show c.-166T>A	CHRNA5	ENSG00000169684.13	transcript	ENST00000299565.9	protein_coding	1/6	166		chr15	TogoVar
CHRNA5_chr15_78560520_78600269	78565597	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(36): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00609.hp2 HG00738.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01168.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01515.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp2 HG01978.hp2 HG02027.hp2 HG02486.hp2 HG02698.hp1 HG02698.hp2 HG03654.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 NA18612.hp2 NA18981.hp1 NA19091.hp2 NA20300.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0006	a0001c0001 a0003c0003 a0004c0005 others(1): Show a0001c0001 a0003c0003 a0004c0005 a0006c0010	a0001c0001t0016 a0001c0001t0026 a0003c0003t0004 others(2): Show a0001c0001t0016 a0001c0001t0026 a0003c0003t0004 a0004c0005t0004 a0006c0010t0004	a0001c0001t0016g0151 a0001c0001t0016g0152 a0001c0001t0026g0157 others(27): Show a0001c0001t0016g0151 a0001c0001t0016g0152 a0001c0001t0026g0157 a0003c0003t0004g0002 a0003c0003t0004g0028 a0003c0003t0004g0030 a0003c0003t0004g0140 a0003c0003t0004g0158 a0003c0003t0004g0160 a0003c0003t0004g0161 a0003c0003t0004g0162 a0003c0003t0004g0163 a0003c0003t0004g0164 a0003c0003t0004g0165 a0003c0003t0004g0166 a0003c0003t0004g0167 a0003c0003t0004g0168 a0003c0003t0004g0170 a0003c0003t0004g0171 a0003c0003t0004g0172 a0003c0003t0004g0173 a0003c0003t0004g0223 a0003c0003t0004g0304 a0003c0003t0004g0305 a0003c0003t0004g0306 a0003c0003t0004g0307 a0003c0003t0004g0308 a0004c0005t0004g0029 a0004c0005t0004g0169 a0006c0010t0004g0159	39	382	0.1021	0	c.-12 others(4): Show c.-123T>G	CHRNA5	ENSG00000169684.13	transcript	ENST00000299565.9	protein_coding	1/6	123		chr15	TogoVar
CHRNA6_chr8_42747620_42773786	42768543	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02055.hp2 HG02451.hp2 HG02622.hp2 others(7): Show HG02055.hp2 HG02451.hp2 HG02622.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG03209.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0011 a0001c0001t0004g0015 a0001c0001t0004g0036 others(2): Show a0001c0001t0004g0011 a0001c0001t0004g0015 a0001c0001t0004g0036 a0001c0001t0004g0037 a0001c0001t0004g0038	10	350	0.0286	0	c.-11 others(4): Show c.-113G>A	CHRNA6	ENSG00000147434.9	transcript	ENST00000276410.7	protein_coding	1/6	113		chr8	TogoVar
CHRNA6_chr8_42747620_42773786	42768544	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0017 a0001c0008t0017	a0001c0008t0017g0142 a0001c0008t0017g0142	1	350	0.0029	0	c.-11 others(4): Show c.-114C>G	CHRNA6	ENSG00000147434.9	transcript	ENST00000276410.7	protein_coding	1/6	114		chr8	TogoVar
CHRNA6_chr8_42747620_42773786	42768588	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00558.hp2 NA18945.hp1 NA18974.hp1 others(2): Show HG00558.hp2 NA18945.hp1 NA18974.hp1 NA18985.hp2 NA19090.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0005 a0001c0001 a0004c0005	a0001c0001t0009 a0004c0005t0018 a0001c0001t0009 a0004c0005t0018	a0001c0001t0009g0024 a0001c0001t0009g0143 a0004c0005t0018g0144 a0001c0001t0009g0024 a0001c0001t0009g0143 a0004c0005t0018g0144	5	350	0.0143	0	c.-15 others(4): Show c.-158C>G	CHRNA6	ENSG00000147434.9	transcript	ENST00000276410.7	protein_coding	1/6	158		chr8	TogoVar
CHRNA6_chr8_42747620_42773786	42768628	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0035 a0001c0001t0012g0035	1	350	0.0029	0	c.-19 others(4): Show c.-198G>A	CHRNA6	ENSG00000147434.9	transcript	ENST00000276410.7	protein_coding	1/6	198		chr8	TogoVar
CHRNA7_chr15_32025515_32178018	32030549	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01081.hp1 HG02257.hp2 HG02258.hp1 others(4): Show HG01081.hp1 HG02257.hp2 HG02258.hp1 HG02451.hp1 HG02615.hp1 HG03098.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0051 a0001c0001t0053 a0001c0001t0054 others(4): Show a0001c0001t0051 a0001c0001t0053 a0001c0001t0054 a0001c0001t0055 a0001c0002t0049 a0001c0002t0050 a0001c0004t0052	a0001c0001t0051g0080 a0001c0001t0053g0081 a0001c0001t0054g0076 others(4): Show a0001c0001t0051g0080 a0001c0001t0053g0081 a0001c0001t0054g0076 a0001c0001t0055g0079 a0001c0002t0049g0219 a0001c0002t0050g0075 a0001c0004t0052g0077	7	307	0.0228	0	c.-46 others(3): Show c.-46G>T	CHRNA7	ENSG00000175344.19	transcript	ENST00000306901.9	protein_coding	1/10	46		chr15	TogoVar
CHRNA9_chr4_40330333_40360217	40335377	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18966.hp1 NA18966.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0044 a0001c0002t0010g0044	1	420	0.0024	0	c.-91 others(3): Show c.-91G>T	CHRNA9	ENSG00000174343.6	transcript	ENST00000310169.3	protein_coding	1/5	91		chr4	TogoVar
CHRNB1_chr17_7440061_7462710	7445115	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0006 a0004c0004t0006	a0004c0004t0006g0284 a0004c0004t0006g0284	1	368	0.0027	0	c.-13 others(3): Show c.-13G>C	CHRNB1	ENSG00000170175.11	transcript	ENST00000306071.7	protein_coding	1/11	13		chr17	TogoVar
CHRNB2_chr1_154562778_154585013	154567831	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp2 HG01891.hp1 HG02055.hp2 others(33): Show HG01884.hp2 HG01891.hp1 HG02055.hp2 HG02109.hp2 HG02145.hp2 HG02257.hp1 HG02486.hp2 HG02559.hp2 HG02615.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG06807.hp2 NA18522.hp2 NA19030.hp2 NA19240.hp2 NA20129.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 a0001c0001 a0001c0002 a0002c0003	a0001c0001t0006 a0001c0001t0014 a0001c0001t0019 others(5): Show a0001c0001t0006 a0001c0001t0014 a0001c0001t0019 a0001c0001t0020 a0001c0001t0029 a0001c0001t0055 a0001c0002t0054 a0002c0003t0019	a0001c0001t0006g0003 a0001c0001t0006g0005 a0001c0001t0006g0046 others(11): Show a0001c0001t0006g0003 a0001c0001t0006g0005 a0001c0001t0006g0046 a0001c0001t0006g0047 a0001c0001t0014g0014 a0001c0001t0014g0049 a0001c0001t0014g0050 a0001c0001t0019g0005 a0001c0001t0019g0048 a0001c0001t0020g0013 a0001c0001t0029g0003 a0001c0001t0055g0003 a0001c0002t0054g0003 a0002c0003t0019g0005	36	424	0.0849	0	c.-21 others(4): Show c.-214A>G	CHRNB2	ENSG00000160716.6	transcript	ENST00000368476.4	protein_coding	1/6	214		chr1	TogoVar
CHRNB2_chr1_154562778_154585013	154567861	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0053 a0001c0001t0053	a0001c0001t0053g0002 a0001c0001t0053g0002	1	424	0.0024	0	c.-18 others(4): Show c.-184A>G	CHRNB2	ENSG00000160716.6	transcript	ENST00000368476.4	protein_coding	1/6	184		chr1	TogoVar
CHRNB2_chr1_154562778_154585013	154567990	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02886.hp2 HG02976.hp2 HG03130.hp1 others(2): Show HG02886.hp2 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0014 a0001c0001t0014g0049 a0001c0001t0014g0050 a0001c0001t0014g0014 a0001c0001t0014g0049 a0001c0001t0014g0050	5	424	0.0118	0	c.-55 others(3): Show c.-55C>T	CHRNB2	ENSG00000160716.6	transcript	ENST00000368476.4	protein_coding	1/6	55		chr1	TogoVar
CHRNB2_chr1_154562778_154585013	154567992	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00408.hp2 HG00558.hp2 others(60): Show HG00280.hp1 HG00408.hp2 HG00558.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01074.hp1 HG01109.hp1 HG01167.hp2 HG01169.hp1 HG01256.hp1 HG01258.hp1 HG01952.hp2 HG01993.hp2 HG02071.hp1 HG02083.hp1 HG02258.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02602.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp2 HG03017.hp1 HG03209.hp1 HG03942.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG06807.hp1 NA18941.hp1 NA18947.hp2 NA18949.hp2 NA18952.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18960.hp2 NA18963.hp1 NA18975.hp1 NA18989.hp1 NA18990.hp2 NA18994.hp2 NA19009.hp1 NA19012.hp1 NA19030.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp2 NA19062.hp1 NA19062.hp2 NA19072.hp2 NA19074.hp2 NA19078.hp2 NA19081.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0013 a0001c0001t0017 others(5): Show a0001c0001t0003 a0001c0001t0013 a0001c0001t0017 a0001c0001t0018 a0001c0001t0028 a0001c0001t0050 a0001c0001t0051 a0001c0001t0053	a0001c0001t0003g0002 a0001c0001t0003g0008 a0001c0001t0003g0010 others(13): Show a0001c0001t0003g0002 a0001c0001t0003g0008 a0001c0001t0003g0010 a0001c0001t0003g0017 a0001c0001t0013g0002 a0001c0001t0013g0006 a0001c0001t0013g0008 a0001c0001t0013g0017 a0001c0001t0017g0006 a0001c0001t0018g0023 a0001c0001t0018g0045 a0001c0001t0028g0002 a0001c0001t0028g0006 a0001c0001t0050g0002 a0001c0001t0051g0026 a0001c0001t0053g0002	63	424	0.1486	0	c.-53 others(3): Show c.-53C>T	CHRNB2	ENSG00000160716.6	transcript	ENST00000368476.4	protein_coding	1/6	53		chr1	TogoVar
CHRNB2_chr1_154562778_154585013	154567994	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02451.hp1 HG02723.hp2 HG02451.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0001 a0001c0001t0021g0029 a0001c0001t0021g0001 a0001c0001t0021g0029	2	424	0.0047	0	c.-51 others(3): Show c.-51C>A	CHRNB2	ENSG00000160716.6	transcript	ENST00000368476.4	protein_coding	1/6	51		chr1	TogoVar
CHRNB2_chr1_154562778_154585013	154567996	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02451.hp1 HG02723.hp2 HG02451.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0001 a0001c0001t0021g0029 a0001c0001t0021g0001 a0001c0001t0021g0029	2	424	0.0047	0	c.-49 others(3): Show c.-49G>C	CHRNB2	ENSG00000160716.6	transcript	ENST00000368476.4	protein_coding	1/6	49		chr1	TogoVar
CHRNB3_chr8_42692366_42742407	42697373	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0107 a0001c0001t0008g0107	1	282	0.0036	0	c.-17 others(4): Show c.-174G>A	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	1/6	174		chr8	TogoVar
CHRNB3_chr8_42692366_42742407	42697387	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp2 HG01261.hp2 HG01928.hp1 others(4): Show HG00280.hp2 HG01261.hp2 HG01928.hp1 HG01975.hp1 HG01978.hp2 HG02273.hp2 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0009 a0001c0001t0005 a0001c0001t0009	a0001c0001t0005g0157 a0001c0001t0005g0186 a0001c0001t0005g0231 others(4): Show a0001c0001t0005g0157 a0001c0001t0005g0186 a0001c0001t0005g0231 a0001c0001t0005g0232 a0001c0001t0005g0248 a0001c0001t0005g0250 a0001c0001t0009g0229	7	282	0.0248	0	c.-16 others(4): Show c.-160G>C	CHRNB3	ENSG00000147432.7	transcript	ENST00000289957.3	protein_coding	1/6	160		chr8	TogoVar
CHRNE_chr17_4892771_4908098	4903071	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00642.hp1 HG01167.hp2 HG01169.hp1 others(16): Show HG00642.hp1 HG01167.hp2 HG01169.hp1 HG01891.hp1 HG02145.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG03041.hp1 HG03209.hp2 HG03516.hp1 HG06807.hp1 NA19043.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0012 a0001c0001t0030 a0001c0001t0041 others(5): Show a0001c0001t0012 a0001c0001t0030 a0001c0001t0041 a0001c0001t0043 a0001c0001t0044 a0001c0007t0022 a0001c0007t0042 a0001c0007t0045	a0001c0001t0012g0011 a0001c0001t0030g0034 a0001c0001t0041g0047 others(5): Show a0001c0001t0012g0011 a0001c0001t0030g0034 a0001c0001t0041g0047 a0001c0001t0043g0048 a0001c0001t0044g0049 a0001c0007t0022g0028 a0001c0007t0042g0050 a0001c0007t0045g0051	19	446	0.0426	0	c.-8G others(2): Show c.-8G>A	CHRNE	ENSG00000108556.10	transcript	ENST00000649488.2	protein_coding	1/12	8		chr17	TogoVar
CHST10_chr2_100386860_100422668	100415050	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18974.hp2 NA19078.hp1 NA18974.hp2 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0049 a0001c0001t0013g0049	2	364	0.0055	0	c.-42 others(3): Show c.-42G>T	CHST10	ENSG00000115526.11	transcript	ENST00000264249.8	protein_coding	2/7	8375		chr2	TogoVar
CHST10_chr2_100386860_100422668	100415056	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19068.hp1 NA19068.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0025 a0001c0004t0025	a0001c0004t0025g0165 a0001c0004t0025g0165	1	364	0.0028	0	c.-48 others(3): Show c.-48C>T	CHST10	ENSG00000115526.11	transcript	ENST00000264249.8	protein_coding	2/7	8381		chr2	TogoVar
CHST10_chr2_100386860_100422668	100415099	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp2 others(116): Show HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp2 HG00738.hp1 HG00741.hp1 HG01071.hp2 HG01081.hp2 HG01167.hp1 HG01169.hp2 HG01192.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp1 HG01346.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp2 HG01928.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02056.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02129.hp2 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02293.hp2 HG02602.hp1 HG02630.hp2 HG02683.hp1 HG02698.hp1 HG02738.hp2 HG03239.hp2 HG03669.hp1 HG03669.hp2 HG03710.hp2 HG04228.hp2 NA18612.hp2 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18953.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18973.hp1 NA18974.hp2 NA18978.hp1 NA18979.hp1 NA18980.hp2 NA18985.hp1 NA18987.hp1 NA18990.hp2 NA18991.hp2 NA18993.hp1 NA18994.hp1 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp2 NA19003.hp2 NA19005.hp1 NA19006.hp2 NA19057.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp2 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 others(1): Show a0001c0001 a0001c0004 a0001c0006 a0001c0016	a0001c0001t0002 a0001c0001t0008 a0001c0001t0011 others(9): Show a0001c0001t0002 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0017 a0001c0001t0023 a0001c0001t0024 a0001c0004t0002 a0001c0004t0025 a0001c0006t0002 a0001c0016t0002	a0001c0001t0002g0001 a0001c0001t0002g0009 a0001c0001t0002g0020 others(56): Show a0001c0001t0002g0001 a0001c0001t0002g0009 a0001c0001t0002g0020 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0123 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0151 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0008g0014 a0001c0001t0008g0124 a0001c0001t0008g0140 a0001c0001t0008g0144 a0001c0001t0008g0157 a0001c0001t0011g0046 a0001c0001t0012g0128 a0001c0001t0012g0129 a0001c0001t0013g0049 a0001c0001t0017g0050 a0001c0001t0023g0162 a0001c0001t0024g0149 a0001c0004t0002g0010 a0001c0004t0002g0137 a0001c0004t0002g0152 a0001c0004t0025g0165 a0001c0006t0002g0013 a0001c0016t0002g0150	119	364	0.3269	0	c.-91 others(3): Show c.-91C>A	CHST10	ENSG00000115526.11	transcript	ENST00000264249.8	protein_coding	2/7	8424		chr2	TogoVar
CHST10_chr2_100386860_100422668	100417421	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0021	a0001c0002t0021g0054 a0001c0002t0021g0054	1	364	0.0028	0	c.-15 others(4): Show c.-151G>A	CHST10	ENSG00000115526.11	transcript	ENST00000264249.8	protein_coding	1/7	10746		chr2	TogoVar
CHST10_chr2_100386860_100422668	100417475	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18980.hp1 NA18980.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0020 a0001c0002t0020	a0001c0002t0020g0053 a0001c0002t0020g0053	1	364	0.0028	0	c.-20 others(4): Show c.-205C>A	CHST10	ENSG00000115526.11	transcript	ENST00000264249.8	protein_coding	1/7	10800		chr2	TogoVar
CHST10_chr2_100386860_100422668	100417532	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG04184.hp2 NA18973.hp2 HG04184.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0019 a0001c0001t0018 a0001c0001t0019	a0001c0001t0018g0051 a0001c0001t0019g0052 a0001c0001t0018g0051 a0001c0001t0019g0052	2	364	0.0055	0	c.-26 others(4): Show c.-262G>A	CHST10	ENSG00000115526.11	transcript	ENST00000264249.8	protein_coding	1/7	10857		chr2	TogoVar
CHST10_chr2_100386860_100422668	100417595	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0050 a0001c0001t0017g0050	1	364	0.0028	0	c.-32 others(4): Show c.-325G>A	CHST10	ENSG00000115526.11	transcript	ENST00000264249.8	protein_coding	1/7	10920		chr2	TogoVar
CHST11_chr12_104451948_104767014	104457036	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00733.hp2 HG01978.hp2 others(6): Show HG00438.hp1 HG00733.hp2 HG01978.hp2 HG02074.hp1 HG03017.hp1 HG03710.hp1 HG04228.hp1 NA18964.hp2 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0034 a0001c0001t0035 others(2): Show a0001c0001t0020 a0001c0001t0034 a0001c0001t0035 a0001c0001t0070 a0001c0001t0071	a0001c0001t0020g0158 a0001c0001t0020g0159 a0001c0001t0020g0169 others(6): Show a0001c0001t0020g0158 a0001c0001t0020g0159 a0001c0001t0020g0169 a0001c0001t0034g0170 a0001c0001t0034g0173 a0001c0001t0035g0161 a0001c0001t0035g0171 a0001c0001t0070g0172 a0001c0001t0071g0174	9	240	0.0375	0	c.-37 others(4): Show c.-376C>T	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	376		chr12	TogoVar
CHST11_chr12_104451948_104767014	104457160	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0180 a0001c0001t0036g0180	1	240	0.0042	0	c.-25 others(4): Show c.-252G>A	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	252		chr12	TogoVar
CHST11_chr12_104451948_104767014	104457215	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02257.hp1 HG02970.hp2 HG03579.hp1 HG02257.hp1 HG02970.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039	a0001c0001t0037g0069 a0001c0001t0038g0068 a0001c0001t0039g0092 a0001c0001t0037g0069 a0001c0001t0038g0068 a0001c0001t0039g0092	3	240	0.0125	0	c.-19 others(4): Show c.-197C>A	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	197		chr12	TogoVar
CHST11_chr12_104451948_104767014	104457286	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18986.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0069 a0001c0001t0069	a0001c0001t0069g0102 a0001c0001t0069g0102	1	240	0.0042	0	c.-12 others(4): Show c.-126C>T	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	126		chr12	TogoVar
CHST11_chr12_104451948_104767014	104457332	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18942.hp2 NA18942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0160 a0001c0001t0040g0160	1	240	0.0042	0	c.-80 others(3): Show c.-80G>C	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	80		chr12	TogoVar
CHST11_chr12_104451948_104767014	104457334	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp2 HG01891.hp1 HG02109.hp2 others(22): Show HG00140.hp2 HG01891.hp1 HG02109.hp2 HG02258.hp2 HG02723.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03516.hp2 HG03654.hp2 HG04184.hp2 HG06807.hp2 NA18906.hp2 NA18993.hp2 NA19002.hp1 NA19030.hp1 NA19081.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 others(11): Show a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0036 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045	a0001c0001t0012g0175 a0001c0001t0012g0177 a0001c0001t0012g0188 others(22): Show a0001c0001t0012g0175 a0001c0001t0012g0177 a0001c0001t0012g0188 a0001c0001t0013g0178 a0001c0001t0013g0179 a0001c0001t0013g0191 a0001c0001t0014g0176 a0001c0001t0014g0192 a0001c0001t0014g0198 a0001c0001t0021g0183 a0001c0001t0021g0197 a0001c0001t0022g0185 a0001c0001t0022g0186 a0001c0001t0023g0190 a0001c0001t0023g0196 a0001c0001t0024g0182 a0001c0001t0024g0195 a0001c0001t0025g0181 a0001c0001t0025g0193 a0001c0001t0036g0180 a0001c0001t0041g0001 a0001c0001t0042g0194 a0001c0001t0043g0187 a0001c0001t0044g0184 a0001c0001t0045g0189	25	240	0.1042	0	c.-78 others(3): Show c.-78T>C	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	78		chr12	TogoVar
CHST11_chr12_104451948_104767014	104457349	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00733.hp2 HG01978.hp2 others(6): Show HG00438.hp1 HG00733.hp2 HG01978.hp2 HG02074.hp1 HG03017.hp1 HG03710.hp1 HG04228.hp1 NA18964.hp2 NA19083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0034 a0001c0001t0035 others(2): Show a0001c0001t0020 a0001c0001t0034 a0001c0001t0035 a0001c0001t0070 a0001c0001t0071	a0001c0001t0020g0158 a0001c0001t0020g0159 a0001c0001t0020g0169 others(6): Show a0001c0001t0020g0158 a0001c0001t0020g0159 a0001c0001t0020g0169 a0001c0001t0034g0170 a0001c0001t0034g0173 a0001c0001t0035g0161 a0001c0001t0035g0171 a0001c0001t0070g0172 a0001c0001t0071g0174	9	240	0.0375	0	c.-63 others(3): Show c.-63C>G	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	63		chr12	TogoVar
CHST11_chr12_104451948_104767014	104457384	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02109.hp1 HG02559.hp1 HG02572.hp2 others(5): Show HG02109.hp1 HG02559.hp1 HG02572.hp2 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG03453.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0063 a0001c0001t0064 others(4): Show a0001c0001t0033 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0068	a0001c0001t0033g0051 a0001c0001t0033g0055 a0001c0001t0063g0058 others(5): Show a0001c0001t0033g0051 a0001c0001t0033g0055 a0001c0001t0063g0058 a0001c0001t0064g0056 a0001c0001t0065g0054 a0001c0001t0066g0053 a0001c0001t0067g0052 a0001c0001t0068g0059	8	240	0.0333	0	c.-28 others(3): Show c.-28C>T	CHST11	ENSG00000171310.11	transcript	ENST00000303694.6	protein_coding	1/3	28		chr12	TogoVar
CHST12_chr7_2398611_2453484	2403624	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0303 a0001c0001t0303	a0001c0001t0303g0247 a0001c0001t0303g0247	1	344	0.0029	0	c.-12 others(4): Show c.-127C>T	CHST12	ENSG00000136213.10	transcript	ENST00000618655.2	protein_coding	1/2	29016		chr7	TogoVar
CHST12_chr7_2398611_2453484	2403636	CGGGCGCG others(7): Show CGGGCGCGAGGTGAG	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01891.hp2 HG02809.hp2 HG03225.hp2 others(2): Show HG01891.hp2 HG02809.hp2 HG03225.hp2 NA18906.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0298 a0001c0001t0299 a0001c0001t0300 others(2): Show a0001c0001t0298 a0001c0001t0299 a0001c0001t0300 a0001c0001t0301 a0001c0001t0302	a0001c0001t0298g0100 a0001c0001t0299g0101 a0001c0001t0300g0259 others(2): Show a0001c0001t0298g0100 a0001c0001t0299g0101 a0001c0001t0300g0259 a0001c0001t0301g0260 a0001c0001t0302g0262	5	344	0.0145	-14	c.-98 others(21): Show c.-98_-85delGCGCGAGGTGAGGG	CHST12	ENSG00000136213.10	transcript	ENST00000618655.2	protein_coding	1/2	28974	INFO_REALIGN_3_PRIME	chr7	TogoVar
CHST12_chr7_2398611_2453484	2403653	GCGCGAGG others(7): Show GCGCGAGGTGAGGGT	G G	splice_donor_variant others(3): Show splice_donor_variant splice_region_variant 5_prime_UTR_variant intron_variant	HIGH	HG01106.hp1 HG02015.hp1 HG02647.hp1 others(5): Show HG01106.hp1 HG02015.hp1 HG02647.hp1 HG02698.hp1 HG03710.hp2 HG03942.hp2 NA19043.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0290 a0001c0001t0291 a0001c0001t0292 others(5): Show a0001c0001t0290 a0001c0001t0291 a0001c0001t0292 a0001c0001t0293 a0001c0001t0294 a0001c0001t0295 a0001c0001t0296 a0001c0001t0297	a0001c0001t0290g0132 a0001c0001t0291g0220 a0001c0001t0292g0217 others(5): Show a0001c0001t0290g0132 a0001c0001t0291g0220 a0001c0001t0292g0217 a0001c0001t0293g0109 a0001c0001t0294g0134 a0001c0001t0295g0136 a0001c0001t0296g0147 a0001c0001t0297g0052	8	344	0.0233	-14	c.-84 others(23): Show c.-84_-78+7delTCGCGAGGTGAGGG	CHST12	ENSG00000136213.10	transcript	ENST00000618655.2	protein_coding	1/2	28960	INFO_REALIGN_3_PRIME	chr7	TogoVar

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