Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CISH_chr3_50601489_50616774	50611736	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0046 a0001c0002t0015g0046	1	360	0.0028	0	c.-86 others(3): Show c.-86C>T	CISH	ENSG00000114737.16	transcript	ENST00000348721.4	protein_coding	1/3	86		chr3	TogoVar
CITED1_chrX_72296646_72310914	72305885	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02647.hp1 HG02723.hp1 HG03540.hp2 HG02647.hp1 HG02723.hp1 HG03540.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0010 a0001c0003t0002g0010	3	302	0.0099	0	c.-12 others(4): Show c.-126G>A	CITED1	ENSG00000125931.11	transcript	ENST00000651998.1	protein_coding	1/3	3016		chrX	TogoVar
CITED2_chr6_139366807_139379648	139374428	T T	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp1 HG01069.hp1 HG01070.hp2 others(33): Show HG00280.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01168.hp1 HG01261.hp1 HG01261.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01934.hp1 HG01993.hp1 HG02280.hp1 HG02451.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02809.hp2 HG03017.hp2 HG03139.hp1 HG03239.hp2 HG03492.hp2 HG03579.hp2 HG03688.hp2 HG03704.hp1 HG03831.hp1 HG03942.hp2 HG04228.hp2 NA18612.hp1 NA19004.hp1 NA19057.hp2 NA19084.hp2 NA20905.hp1	a0001 a0001	a0001c0002 a0001c0006 a0001c0002 a0001c0006	a0001c0002t0003 a0001c0006t0003 a0001c0002t0003 a0001c0006t0003	a0001c0002t0003g0003 a0001c0006t0003g0036 a0001c0002t0003g0003 a0001c0006t0003g0036	36	322	0.1118	0	c.-24 others(3): Show c.-24A>T	CITED2	ENSG00000164442.11	transcript	ENST00000367651.4	protein_coding	1/2	484		chr6	TogoVar
CITED2_chr6_139366807_139379648	139374447	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0037 a0001c0001t0023g0037	1	322	0.0031	0	c.-43 others(3): Show c.-43C>T	CITED2	ENSG00000164442.11	transcript	ENST00000367651.4	protein_coding	1/2	503		chr6	TogoVar
CITED2_chr6_139366807_139379648	139374456	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp2 HG00642.hp2 HG01074.hp2 others(2): Show HG00280.hp2 HG00642.hp2 HG01074.hp2 HG01361.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0005 a0001c0001t0005g0005	5	322	0.0155	0	c.-52 others(3): Show c.-52G>C	CITED2	ENSG00000164442.11	transcript	ENST00000367651.4	protein_coding	1/2	512		chr6	TogoVar
CITED2_chr6_139366807_139379648	139374478	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18956.hp2 NA18981.hp2 NA19010.hp2 NA18956.hp2 NA18981.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0013 a0001c0001t0011g0013	3	322	0.0093	0	c.-74 others(3): Show c.-74C>G	CITED2	ENSG00000164442.11	transcript	ENST00000367651.4	protein_coding	1/2	534		chr6	TogoVar
CITED4_chr1_40856054_40867363	40862199	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00408.hp1 HG00438.hp1 HG00544.hp1 others(163): Show HG00408.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp2 HG01243.hp1 HG01255.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02615.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02809.hp1 HG02809.hp2 HG02922.hp1 HG02970.hp1 HG02976.hp2 HG03209.hp1 HG03453.hp2 HG03486.hp2 HG03490.hp2 HG03669.hp2 HG03710.hp1 HG03831.hp2 HG03942.hp1 HG04184.hp1 HG04204.hp1 NA18612.hp1 NA18612.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18949.hp1 NA18950.hp1 NA18953.hp2 NA18954.hp2 NA18956.hp2 NA18957.hp2 NA18962.hp1 NA18963.hp2 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18976.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp2 NA18987.hp1 NA18989.hp1 NA18990.hp1 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp1 NA19062.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA20129.hp1	a0002 a0005 a0007 a0002 a0005 a0007	a0002c0002 a0002c0010 a0005c0006 others(1): Show a0002c0002 a0002c0010 a0005c0006 a0007c0007	a0002c0002t0002 a0002c0002t0005 a0002c0002t0008 others(5): Show a0002c0002t0002 a0002c0002t0005 a0002c0002t0008 a0002c0002t0009 a0002c0002t0010 a0002c0010t0002 a0005c0006t0002 a0007c0007t0002	a0002c0002t0002g0000 a0002c0002t0005g0000 a0002c0002t0008g0000 others(5): Show a0002c0002t0002g0000 a0002c0002t0005g0000 a0002c0002t0008g0000 a0002c0002t0009g0000 a0002c0002t0010g0000 a0002c0010t0002g0000 a0005c0006t0002g0000 a0007c0007t0002g0000	166	440	0.3773	0	c.-72 others(3): Show c.-72G>T	CITED4	ENSG00000179862.7	transcript	ENST00000372638.4	protein_coding	1/1	72		chr1	TogoVar
CITED4_chr1_40856054_40867363	40862201	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(333): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18976.hp1 NA18976.hp2 NA18977.hp1 NA18978.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18984.hp2 NA18986.hp2 NA18987.hp1 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp2 NA19074.hp1 NA19075.hp1 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0007	a0001c0001 a0001c0008 a0001c0012 others(8): Show a0001c0001 a0001c0008 a0001c0012 a0002c0002 a0002c0010 a0003c0003 a0003c0005 a0003c0013 a0004c0004 a0005c0006 a0007c0007	a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 others(16): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0008t0001 a0001c0012t0001 a0002c0002t0002 a0002c0002t0005 a0002c0002t0008 a0002c0002t0009 a0002c0002t0010 a0002c0010t0002 a0003c0003t0001 a0003c0005t0001 a0003c0013t0001 a0004c0004t0001 a0005c0006t0002 a0007c0007t0002	a0001c0001t0001g0000 a0001c0001t0004g0000 a0001c0001t0007g0000 others(16): Show a0001c0001t0001g0000 a0001c0001t0004g0000 a0001c0001t0007g0000 a0001c0001t0011g0000 a0001c0001t0012g0000 a0001c0008t0001g0000 a0001c0012t0001g0000 a0002c0002t0002g0000 a0002c0002t0005g0000 a0002c0002t0008g0000 a0002c0002t0009g0000 a0002c0002t0010g0000 a0002c0010t0002g0000 a0003c0003t0001g0000 a0003c0005t0001g0000 a0003c0013t0001g0000 a0004c0004t0001g0000 a0005c0006t0002g0000 a0007c0007t0002g0000	336	440	0.7636	0	c.-74 others(3): Show c.-74C>G	CITED4	ENSG00000179862.7	transcript	ENST00000372638.4	protein_coding	1/1	74		chr1	TogoVar
CITED4_chr1_40856054_40867363	40862321	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18964.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0000 a0001c0001t0011g0000	1	440	0.0023	0	c.-19 others(4): Show c.-194C>G	CITED4	ENSG00000179862.7	transcript	ENST00000372638.4	protein_coding	1/1	194		chr1	TogoVar
CITED4_chr1_40856054_40867363	40862358	CTCCGCGT others(17): Show CTCCGCGTCGCGTAGCTGGGCTCGG	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19064.hp1 NA19064.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0000 a0001c0001t0012g0000	1	440	0.0023	-24	c.-25 others(33): Show c.-255_-232delCCGAGCCCAGCTACGCGACGCGGA	CITED4	ENSG00000179862.7	transcript	ENST00000372638.4	protein_coding	1/1	232		chr1	TogoVar
CIT_chr12_119680791_119882320	119877267	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02976.hp2 HG03579.hp1 NA19043.hp1 HG02976.hp2 HG03579.hp1 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0006 a0001c0002 a0001c0006	a0001c0002t0014 a0001c0006t0027 a0001c0002t0014 a0001c0006t0027	a0001c0002t0014g0235 a0001c0002t0014g0236 a0001c0006t0027g0234 a0001c0002t0014g0235 a0001c0002t0014g0236 a0001c0006t0027g0234	3	236	0.0127	0	c.-32 others(3): Show c.-32A>G	CIT	ENSG00000122966.18	transcript	ENST00000392521.7	protein_coding	1/48	1099		chr12	TogoVar
CKAP2_chr13_52450478_52481627	52455479	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02559.hp2 NA20300.hp1 HG02559.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0036 a0001c0001t0007g0161 a0001c0001t0007g0036 a0001c0001t0007g0161	2	406	0.0049	0	c.-78 others(3): Show c.-78C>T	CKAP2	ENSG00000136108.15	transcript	ENST00000258607.10	protein_coding	1/9	78		chr13	TogoVar
CKAP2_chr13_52450478_52481627	52455516	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0013 a0001c0013	a0001c0013t0008 a0001c0013t0008	a0001c0013t0008g0155 a0001c0013t0008g0155	1	406	0.0025	0	c.-41 others(3): Show c.-41T>C	CKAP2	ENSG00000136108.15	transcript	ENST00000258607.10	protein_coding	1/9	41		chr13	TogoVar
CKAP4_chr12_106232881_106253020	106247951	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0056 a0001c0001t0027g0056	1	418	0.0024	0	c.-10 others(4): Show c.-100C>A	CKAP4	ENSG00000136026.14	transcript	ENST00000378026.5	protein_coding	1/2	100		chr12	TogoVar
CKAP4_chr12_106232881_106253020	106248007	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0026 a0002c0002t0026	a0002c0002t0026g0055 a0002c0002t0026g0055	1	418	0.0024	0	c.-15 others(4): Show c.-156C>A	CKAP4	ENSG00000136026.14	transcript	ENST00000378026.5	protein_coding	1/2	156		chr12	TogoVar
CKAP5_chr11_46738048_46851280	46846271	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0290 a0001c0001t0010g0290	1	294	0.0034	0	c.-89 others(3): Show c.-89C>T	CKAP5	ENSG00000175216.15	transcript	ENST00000529230.6	protein_coding	1/44	25040		chr11	TogoVar
CKLF_chr16_66547576_66571068	66552607	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0047 a0001c0001t0002g0047	1	392	0.0026	0	c.-10 others(4): Show c.-109G>C	CKLF	ENSG00000217555.13	transcript	ENST00000264001.9	protein_coding	1/4	109		chr16	TogoVar
CKLF_chr16_66547576_66571068	66552706	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0013 a0001c0001t0003g0013	1	392	0.0026	0	c.-10 others(3): Show c.-10T>G	CKLF	ENSG00000217555.13	transcript	ENST00000264001.9	protein_coding	1/4	10		chr16	TogoVar
CKMT1B_chr15_43589027_43604406	43594037	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0007 a0001c0002t0004g0007	1	348	0.0029	0	c.-18 others(4): Show c.-182T>C	CKMT1B	ENSG00000237289.10	transcript	ENST00000441322.6	protein_coding	1/9	182		chr15	TogoVar
CKMT1B_chr15_43589027_43604406	43594140	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0005 a0001c0006t0005	a0001c0006t0005g0028 a0001c0006t0005g0028	1	348	0.0029	0	c.-79 others(3): Show c.-79G>A	CKMT1B	ENSG00000237289.10	transcript	ENST00000441322.6	protein_coding	1/9	79		chr15	TogoVar
CKMT1B_chr15_43589027_43604406	43594148	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0002 a0001c0001t0007g0002	1	348	0.0029	0	c.-71 others(3): Show c.-71C>T	CKMT1B	ENSG00000237289.10	transcript	ENST00000441322.6	protein_coding	1/9	71		chr15	TogoVar
CKMT1B_chr15_43589027_43604406	43594164	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00423.hp2 HG02083.hp2 NA18941.hp2 others(13): Show HG00423.hp2 HG02083.hp2 NA18941.hp2 NA18947.hp1 NA18947.hp2 NA18951.hp2 NA18959.hp2 NA18960.hp2 NA18962.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18989.hp2 NA18995.hp2 NA19004.hp2 NA19063.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0003 a0003c0005t0003 a0001c0001t0003 a0003c0005t0003	a0001c0001t0003g0002 a0003c0005t0003g0002 a0001c0001t0003g0002 a0003c0005t0003g0002	16	348	0.0460	0	c.-55 others(3): Show c.-55G>A	CKMT1B	ENSG00000237289.10	transcript	ENST00000441322.6	protein_coding	1/9	55		chr15	TogoVar
CKMT2_chr5_81228322_81271398	81233359	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp2 HG00438.hp1 HG02071.hp1 others(5): Show HG00280.hp2 HG00438.hp1 HG02071.hp1 HG02080.hp1 HG02165.hp2 HG03239.hp2 NA18978.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0208 a0001c0001t0003g0209 a0001c0001t0003g0210 others(5): Show a0001c0001t0003g0208 a0001c0001t0003g0209 a0001c0001t0003g0210 a0001c0001t0003g0211 a0001c0001t0003g0212 a0001c0001t0003g0213 a0001c0001t0003g0214 a0001c0001t0003g0215	8	356	0.0225	0	c.-39 others(3): Show c.-39G>A	CKMT2	ENSG00000131730.16	transcript	ENST00000254035.9	protein_coding	1/10	17774		chr5	TogoVar
CKS1B_chr1_154969681_154984251	154974714	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0001 a0001c0001t0007g0001	1	292	0.0034	0	c.-32 others(3): Show c.-32C>T	CKS1B	ENSG00000173207.13	transcript	ENST00000308987.6	protein_coding	1/3	32		chr1	TogoVar
CKS2_chr9_89306195_89321703	89311205	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18951.hp1 NA18993.hp1 NA19058.hp1 NA18951.hp1 NA18993.hp1 NA19058.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0005	3	440	0.0068	0	c.-88 others(3): Show c.-88G>C	CKS2	ENSG00000123975.5	transcript	ENST00000314355.7	protein_coding	1/3	88		chr9	TogoVar
CKS2_chr9_89306195_89321703	89311209	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01167.hp2 HG01433.hp1 HG01891.hp2 HG01167.hp2 HG01433.hp1 HG01891.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0010 a0001c0001t0005g0010	3	440	0.0068	0	c.-84 others(3): Show c.-84A>G	CKS2	ENSG00000123975.5	transcript	ENST00000314355.7	protein_coding	1/3	84		chr9	TogoVar
CKS2_chr9_89306195_89321703	89311225	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0027 a0001c0001t0006g0027	1	440	0.0023	0	c.-68 others(3): Show c.-68G>A	CKS2	ENSG00000123975.5	transcript	ENST00000314355.7	protein_coding	1/3	68		chr9	TogoVar
CLASP1_chr2_121332776_121654462	121649389	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0001 a0001c0001t0036g0001	1	214	0.0047	0	c.-30 others(4): Show c.-303G>A	CLASP1	ENSG00000074054.21	transcript	ENST00000696935.1	protein_coding	1/41	43494		chr2	TogoVar
CLASP2_chr3_33491245_33723254	33718037	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19009.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0270 a0001c0001t0016g0270	1	278	0.0036	0	c.-35 others(3): Show c.-35C>T	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	1/39	35		chr3	TogoVar
CLASP2_chr3_33491245_33723254	33718102	CACTT CACTT	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01891.hp2 HG02257.hp1 HG02280.hp1 others(4): Show HG01891.hp2 HG02257.hp1 HG02280.hp1 HG02486.hp1 HG02970.hp1 HG02976.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0272 a0001c0001t0005g0273 a0001c0001t0005g0274 others(4): Show a0001c0001t0005g0272 a0001c0001t0005g0273 a0001c0001t0005g0274 a0001c0001t0005g0275 a0001c0001t0005g0276 a0001c0001t0005g0277 a0001c0001t0005g0278	7	278	0.0252	-4	c.-10 others(13): Show c.-104_-101delAAGT	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	1/39	101		chr3	TogoVar
CLASP2_chr3_33491245_33723254	33718179	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0001 a0001c0001t0010g0001	1	278	0.0036	0	c.-17 others(4): Show c.-177T>C	CLASP2	ENSG00000163539.19	transcript	ENST00000682230.1	protein_coding	1/39	177		chr3	TogoVar
CLBA1_chr14_104980788_105000516	104985812	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18956.hp1 NA19005.hp2 NA19070.hp2 others(1): Show NA18956.hp1 NA19005.hp2 NA19070.hp2 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0007 a0001c0001t0010g0007	4	444	0.0090	0	c.-62 others(4): Show c.-620A>G	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	620		chr14	TogoVar
CLBA1_chr14_104980788_105000516	104985884	T T	TGCGGGGC others(22): Show TGCGGGGCCCGGGCCCGGGCCCAGGAACAC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0022 a0001c0001t0021g0022	1	444	0.0023	29	c.-54 others(38): Show c.-542_-541insCCCGGGCCCGGGCCCAGGAACACGCGGGG	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	541	INFO_REALIGN_3_PRIME	chr14	TogoVar
CLBA1_chr14_104980788_105000516	104985884	T T	TGCGGGGC others(21): Show TGCGGGGCCCGGGCCCGGGCCCAGGACAC	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00323.hp2 HG00438.hp1 others(161): Show HG00140.hp1 HG00323.hp2 HG00438.hp1 HG00621.hp1 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG01074.hp1 HG01099.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01516.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG02004.hp1 HG02027.hp1 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02148.hp1 HG02155.hp1 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04115.hp1 HG04199.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18942.hp1 NA18944.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp2 NA18952.hp1 NA18954.hp1 NA18956.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18970.hp1 NA18970.hp2 NA18974.hp2 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18985.hp2 NA18986.hp1 NA18988.hp2 NA18991.hp1 NA18998.hp1 NA19000.hp2 NA19003.hp1 NA19005.hp2 NA19010.hp2 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19057.hp1 NA19058.hp1 NA19059.hp2 NA19063.hp2 NA19064.hp1 NA19067.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19079.hp1 NA19080.hp1 NA19081.hp2 NA19083.hp2 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19089.hp1 NA19089.hp2 NA19091.hp1 NA20752.hp1	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0010	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0012 a0003c0005 a0006c0009 a0010c0011	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(12): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0010 a0001c0001t0022 a0001c0001t0024 a0001c0002t0003 a0001c0002t0023 a0001c0004t0007 a0001c0012t0003 a0003c0005t0002 a0003c0005t0025 a0006c0009t0002 a0010c0011t0002	a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0011 others(65): Show a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0013 a0001c0001t0002g0017 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0027 a0001c0001t0002g0031 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0050 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0072 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0086 a0001c0001t0003g0012 a0001c0001t0003g0030 a0001c0001t0003g0058 a0001c0001t0003g0059 a0001c0001t0003g0071 a0001c0001t0004g0019 a0001c0001t0004g0024 a0001c0001t0004g0043 a0001c0001t0004g0079 a0001c0001t0004g0087 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0004g0094 a0001c0001t0004g0103 a0001c0001t0005g0007 a0001c0001t0005g0026 a0001c0001t0005g0032 a0001c0001t0005g0073 a0001c0001t0010g0007 a0001c0001t0022g0080 a0001c0001t0024g0017 a0001c0002t0003g0029 a0001c0002t0003g0052 a0001c0002t0003g0063 a0001c0002t0003g0065 a0001c0002t0023g0029 a0001c0004t0007g0014 a0001c0004t0007g0076 a0001c0004t0007g0077 a0001c0004t0007g0081 a0001c0012t0003g0062 a0003c0005t0002g0028 a0003c0005t0002g0067 a0003c0005t0025g0051 a0006c0009t0002g0093 a0010c0011t0002g0047	164	444	0.3694	28	c.-54 others(37): Show c.-542_-541insCCCGGGCCCGGGCCCAGGACACGCGGGG	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	541	INFO_REALIGN_3_PRIME	chr14	TogoVar
CLBA1_chr14_104980788_105000516	104985928	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0020 a0001c0002t0020	a0001c0002t0020g0005 a0001c0002t0020g0005	1	444	0.0023	0	c.-50 others(4): Show c.-504C>T	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	504		chr14	TogoVar
CLBA1_chr14_104980788_105000516	104985943	A A	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02015.hp1 HG02738.hp2 HG03017.hp2 others(1): Show HG02015.hp1 HG02738.hp2 HG03017.hp2 HG03927.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0003 a0001c0002t0009g0005 a0001c0002t0009g0128 others(1): Show a0001c0002t0009g0003 a0001c0002t0009g0005 a0001c0002t0009g0128 a0001c0002t0009g0130	4	444	0.0090	0	c.-48 others(4): Show c.-489A>C	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	489		chr14	TogoVar
CLBA1_chr14_104980788_105000516	104985954	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp2 HG00733.hp2 HG01884.hp1 others(22): Show HG00639.hp2 HG00733.hp2 HG01884.hp1 HG02109.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG06807.hp2 NA19030.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0004 a0001c0001t0022 a0001c0004t0007 a0001c0001t0004 a0001c0001t0022 a0001c0004t0007	a0001c0001t0004g0019 a0001c0001t0004g0024 a0001c0001t0004g0043 others(14): Show a0001c0001t0004g0019 a0001c0001t0004g0024 a0001c0001t0004g0043 a0001c0001t0004g0079 a0001c0001t0004g0087 a0001c0001t0004g0088 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0004g0092 a0001c0001t0004g0094 a0001c0001t0004g0103 a0001c0001t0022g0080 a0001c0004t0007g0014 a0001c0004t0007g0076 a0001c0004t0007g0077 a0001c0004t0007g0081	25	444	0.0563	0	c.-47 others(4): Show c.-478T>C	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	478		chr14	TogoVar
CLBA1_chr14_104980788_105000516	104986294	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp2 HG01884.hp1 HG02809.hp2 others(5): Show HG00639.hp2 HG01884.hp1 HG02809.hp2 HG03139.hp1 HG03453.hp1 HG06807.hp2 NA19030.hp1 NA19030.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0014 a0001c0004t0007g0076 a0001c0004t0007g0077 others(1): Show a0001c0004t0007g0014 a0001c0004t0007g0076 a0001c0004t0007g0077 a0001c0004t0007g0081	8	444	0.0180	0	c.-13 others(4): Show c.-138G>T	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	138		chr14	TogoVar
CLBA1_chr14_104980788_105000516	104986363	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18965.hp2 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0006 a0001c0001t0018g0006	1	444	0.0023	0	c.-69 others(3): Show c.-69C>T	CLBA1	ENSG00000140104.14	transcript	ENST00000547315.6	protein_coding	1/5	69		chr14	TogoVar
CLCC1_chr1_108924505_108968484	108962354	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02572.hp2 HG03041.hp1 HG02572.hp2 HG03041.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0026 a0002c0003t0027 a0002c0003t0026 a0002c0003t0027	a0002c0003t0026g0293 a0002c0003t0027g0294 a0002c0003t0026g0293 a0002c0003t0027g0294	2	394	0.0051	0	c.-57 others(3): Show c.-57C>A	CLCC1	ENSG00000121940.17	transcript	ENST00000369969.7	protein_coding	2/13	11917		chr1	TogoVar
CLCF1_chr11_67359168_67378598	67373560	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02809.hp1 NA19240.hp2 HG02809.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0003 a0001c0001t0003 a0001c0002t0003	a0001c0001t0003g0028 a0001c0002t0003g0029 a0001c0001t0003g0028 a0001c0002t0003g0029	2	308	0.0065	0	c.-21 others(3): Show c.-21G>C	CLCF1	ENSG00000175505.11	transcript	ENST00000312438.8	protein_coding	1/3	21		chr11	TogoVar
CLCN1_chr7_143311111_143357083	143316197	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01123.hp2 HG01243.hp1 HG02004.hp1 others(4): Show HG01123.hp2 HG01243.hp1 HG02004.hp1 HG02004.hp2 HG02300.hp2 NA18974.hp1 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0002 a0001c0003t0002 a0001c0004t0002 a0001c0001t0002 a0001c0003t0002 a0001c0004t0002	a0001c0001t0002g0011 a0001c0001t0002g0163 a0001c0001t0002g0181 others(4): Show a0001c0001t0002g0011 a0001c0001t0002g0163 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0275 a0001c0003t0002g0187 a0001c0004t0002g0088	7	414	0.0169	0	c.-16 others(3): Show c.-16C>G	CLCN1	ENSG00000188037.14	transcript	ENST00000343257.7	protein_coding	1/23	16		chr7	TogoVar
CLCN1_chr7_143311111_143357083	143316198	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01123.hp2 HG01243.hp1 HG02004.hp1 others(4): Show HG01123.hp2 HG01243.hp1 HG02004.hp1 HG02004.hp2 HG02300.hp2 NA18974.hp1 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0002 a0001c0003t0002 a0001c0004t0002 a0001c0001t0002 a0001c0003t0002 a0001c0004t0002	a0001c0001t0002g0011 a0001c0001t0002g0163 a0001c0001t0002g0181 others(4): Show a0001c0001t0002g0011 a0001c0001t0002g0163 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0275 a0001c0003t0002g0187 a0001c0004t0002g0088	7	414	0.0169	0	c.-15 others(3): Show c.-15T>G	CLCN1	ENSG00000188037.14	transcript	ENST00000343257.7	protein_coding	1/23	15		chr7	TogoVar
CLCN1_chr7_143311111_143357083	143316199	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01123.hp2 HG01243.hp1 HG02004.hp1 others(4): Show HG01123.hp2 HG01243.hp1 HG02004.hp1 HG02004.hp2 HG02300.hp2 NA18974.hp1 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0002 a0001c0003t0002 a0001c0004t0002 a0001c0001t0002 a0001c0003t0002 a0001c0004t0002	a0001c0001t0002g0011 a0001c0001t0002g0163 a0001c0001t0002g0181 others(4): Show a0001c0001t0002g0011 a0001c0001t0002g0163 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0275 a0001c0003t0002g0187 a0001c0004t0002g0088	7	414	0.0169	0	c.-14 others(3): Show c.-14C>A	CLCN1	ENSG00000188037.14	transcript	ENST00000343257.7	protein_coding	1/23	14		chr7	TogoVar
CLCN1_chr7_143311111_143357083	143316202	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0188 a0002c0002t0004g0188	1	414	0.0024	0	c.-11 others(3): Show c.-11G>C	CLCN1	ENSG00000188037.14	transcript	ENST00000343257.7	protein_coding	1/23	11		chr7	TogoVar
CLCN2_chr3_184341185_184366605	184361546	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0235 a0001c0001t0009g0235	1	460	0.0022	0	c.-67 others(3): Show c.-67C>T	CLCN2	ENSG00000114859.16	transcript	ENST00000265593.9	protein_coding	1/24	67		chr3	TogoVar
CLCN3_chr4_169615578_169728673	169620578	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02976.hp2 NA21309.hp1 HG02976.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0002 a0001c0001t0025g0002	2	288	0.0069	0	c.-50 others(4): Show c.-502C>G	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	1/13	15351		chr4	TogoVar
CLCN3_chr4_169615578_169728673	169620589	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03831.hp1 HG04115.hp2 HG03831.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0218 a0001c0001t0024g0222 a0001c0001t0024g0218 a0001c0001t0024g0222	2	288	0.0069	0	c.-49 others(4): Show c.-491C>T	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	1/13	15340		chr4	TogoVar
CLCN3_chr4_169615578_169728673	169635918	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0050 a0001c0002t0050	a0001c0002t0050g0104 a0001c0002t0050g0104	1	288	0.0035	0	c.-11 others(3): Show c.-11C>T	CLCN3	ENSG00000109572.16	transcript	ENST00000513761.6	protein_coding	2/13	11		chr4	TogoVar
CLCN4_chrX_10151975_10242660	10158391	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01346.hp2 HG02602.hp1 HG01346.hp2 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0040 a0001c0002t0039 a0001c0001t0040 a0001c0002t0039	a0001c0001t0040g0156 a0001c0002t0039g0155 a0001c0001t0040g0156 a0001c0002t0039g0155	2	264	0.0076	0	c.-17 others(4): Show c.-172C>T	CLCN4	ENSG00000073464.13	transcript	ENST00000380833.9	protein_coding	2/13	26642		chrX	TogoVar

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