JoGo: Joint Open Genome and Omics Platform

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
ABT1_chr6_26591953_26605739	26601712	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00597.hp2 HG00642.hp2 others(60): Show HG00099.hp2 HG00597.hp2 HG00642.hp2 HG00733.hp1 HG00738.hp2 HG01070.hp2 HG01123.hp1 HG01884.hp1 HG02015.hp2 HG02055.hp1 HG02155.hp1 HG02451.hp2 HG02523.hp1 HG02615.hp2 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG03017.hp2 HG03041.hp2 HG03225.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp1 HG03834.hp2 NA18522.hp2 NA18612.hp1 NA18939.hp1 NA18942.hp2 NA18943.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp2 NA18952.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp2 NA18969.hp2 NA18972.hp1 NA18976.hp2 NA18980.hp2 NA18981.hp1 NA18983.hp2 NA18994.hp2 NA19003.hp2 NA19005.hp2 NA19011.hp1 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19066.hp1 NA19081.hp1 NA19082.hp2 NA19088.hp1 NA21309.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0005 a0001c0003t0009 others(1): Show a0001c0003t0001 a0001c0003t0005 a0001c0003t0009 a0001c0003t0016	a0001c0003t0001g0003 a0001c0003t0005g0003 a0001c0003t0009g0003 others(1): Show a0001c0003t0001g0003 a0001c0003t0005g0003 a0001c0003t0009g0003 a0001c0003t0016g0003	63	410	0.1537	0	c.30 others(5): Show c.3067G>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	973	chr6	TogoVar
ABT1_chr6_26591953_26605739	26601989	G G	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(404): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18976.hp1 NA18976.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19072.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0002c0006 a0002c0011 a0003c0008 a0004c0009 a0005c0010 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(23): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0013 a0001c0001t0017 a0001c0002t0001 a0001c0002t0011 a0001c0002t0012 a0001c0002t0014 a0001c0002t0015 a0001c0003t0001 a0001c0003t0003 a0001c0003t0005 a0001c0003t0009 a0001c0003t0010 a0001c0003t0016 a0001c0004t0004 a0001c0004t0008 a0001c0005t0001 a0002c0006t0002 a0002c0011t0002 a0003c0008t0001 a0004c0009t0001 a0005c0010t0001 a0006c0007t0018	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0002g0001 others(26): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0006g0001 a0001c0001t0007g0001 a0001c0001t0013g0001 a0001c0001t0017g0001 a0001c0002t0001g0002 a0001c0002t0011g0002 a0001c0002t0012g0002 a0001c0002t0014g0002 a0001c0002t0015g0002 a0001c0003t0001g0003 a0001c0003t0001g0004 a0001c0003t0003g0004 a0001c0003t0005g0003 a0001c0003t0009g0003 a0001c0003t0010g0004 a0001c0003t0016g0003 a0001c0004t0004g0002 a0001c0004t0008g0002 a0001c0005t0001g0002 a0002c0006t0002g0001 a0002c0011t0002g0001 a0003c0008t0001g0001 a0004c0009t0001g0001 a0005c0010t0001g0001 a0006c0007t0018g0005	407	410	0.9927	0	c.33 others(5): Show c.3344G>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1250	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602077	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG02257.hp1 HG02486.hp2 others(17): Show HG01891.hp1 HG02257.hp1 HG02486.hp2 HG02717.hp2 HG02723.hp1 HG03195.hp2 NA18955.hp2 NA18973.hp1 NA18976.hp1 NA18984.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18999.hp2 NA19054.hp2 NA19072.hp1 NA19078.hp2 NA19079.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	20	410	0.0488	0	c.34 others(5): Show c.3432T>G	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1338	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602145	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02895.hp2 HG03041.hp1 others(1): Show HG02109.hp2 HG02895.hp2 HG03041.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	4	410	0.0098	0	c.35 others(5): Show c.3500C>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1406	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602197	G G	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.35 others(5): Show c.3552G>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1458	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602198	C C	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	410	0.0024	0	c.35 others(5): Show c.3553C>G	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1459	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602200	GCATGGTG others(3): Show GCATGGTGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	-10	c.35 others(21): Show c.3556_*3565delCATGGTGTGT	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1462	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602225	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00597.hp2 HG00642.hp2 others(60): Show HG00099.hp2 HG00597.hp2 HG00642.hp2 HG00733.hp1 HG00738.hp2 HG01070.hp2 HG01123.hp1 HG01884.hp1 HG02015.hp2 HG02055.hp1 HG02155.hp1 HG02451.hp2 HG02523.hp1 HG02615.hp2 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG03017.hp2 HG03041.hp2 HG03225.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp1 HG03834.hp2 NA18522.hp2 NA18612.hp1 NA18939.hp1 NA18942.hp2 NA18943.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp2 NA18952.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp2 NA18969.hp2 NA18972.hp1 NA18976.hp2 NA18980.hp2 NA18981.hp1 NA18983.hp2 NA18994.hp2 NA19003.hp2 NA19005.hp2 NA19011.hp1 NA19030.hp2 NA19054.hp1 NA19055.hp1 NA19055.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19066.hp1 NA19081.hp1 NA19082.hp2 NA19088.hp1 NA21309.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0005 a0001c0003t0009 others(1): Show a0001c0003t0001 a0001c0003t0005 a0001c0003t0009 a0001c0003t0016	a0001c0003t0001g0003 a0001c0003t0005g0003 a0001c0003t0009g0003 others(1): Show a0001c0003t0001g0003 a0001c0003t0005g0003 a0001c0003t0009g0003 a0001c0003t0016g0003	63	410	0.1537	0	c.35 others(5): Show c.3580A>G	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1486	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602226	G G	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.35 others(5): Show c.3581G>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1487	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602230	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.35 others(5): Show c.3585T>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1491	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602231	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.35 others(5): Show c.3586T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1492	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602241	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.35 others(5): Show c.3596A>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1502	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602243	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.35 others(5): Show c.3598T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1504	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602252	G G	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.36 others(5): Show c.3607G>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1513	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602256	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.36 others(5): Show c.3611T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1517	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602257	G G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.36 others(5): Show c.3612G>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1518	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602263	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.36 others(5): Show c.3618T>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1524	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602338	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.36 others(5): Show c.3693T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1599	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602351	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3706C>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1612	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602353	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3708A>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1614	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602354	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3709T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1615	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602359	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3714T>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1620	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602375	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3730T>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1636	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602392	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3747C>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1653	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602402	G G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3757G>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1663	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602433	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.37 others(5): Show c.3788T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1694	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602488	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.38 others(5): Show c.3843A>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1749	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602503	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.38 others(5): Show c.3858A>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1764	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602526	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.38 others(5): Show c.3881G>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1787	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602531	AGAGAGAC others(37): Show AGAGAGACCATCTTTGGTATTTATTTTGTTAGCAAGAAAAAAATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	-44	c.38 others(55): Show c.3887_*3930delGAGAGACCATCTTTGGTATTTATTTTGTTAGCAA GAAAAAAATT	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1793	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602591	TAGGAAAA others(10): Show TAGGAAAATACCAGTCAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0004 a0001c0003t0003g0004	1	410	0.0024	-17	c.39 others(28): Show c.3947_*3963delAGGAAAATACCAGTCAC	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1853	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602603	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.39 others(5): Show c.3958A>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1864	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602606	C C	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.39 others(5): Show c.3961C>G	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1867	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602607	A A	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.39 others(5): Show c.3962A>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1868	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602608	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.39 others(5): Show c.3963C>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1869	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602625	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0004 a0001c0003t0003g0004	1	410	0.0024	0	c.39 others(5): Show c.3980C>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1886	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602643	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.39 others(5): Show c.3998C>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1904	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602645	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4000T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1906	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602651	G G	GGACTCAC others(12): Show GGACTCACCAACACTACTAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	19	c.40 others(30): Show c.4006_*4007insGACTCACCAACACTACTAC	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1913	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602666	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4021T>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1927	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602668	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4023T>G	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1929	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602679	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4034T>G	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1940	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602681	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG02109.hp2 HG02257.hp1 others(29): Show HG01891.hp1 HG02109.hp2 HG02257.hp1 HG02486.hp2 HG02572.hp2 HG02717.hp2 HG02723.hp1 HG02895.hp2 HG02896.hp2 HG03041.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp2 HG03453.hp2 HG03471.hp2 HG03540.hp2 HG03579.hp1 NA18955.hp2 NA18973.hp1 NA18976.hp1 NA18984.hp1 NA18989.hp2 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA18999.hp2 NA19054.hp2 NA19072.hp1 NA19078.hp2 NA19079.hp2 NA19087.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	32	410	0.0781	0	c.40 others(5): Show c.4036T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1942	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602682	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4037T>G	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1943	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602684	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4039T>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1945	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602689	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4044T>C	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1950	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602700	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4055A>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	1961	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602739	G G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.40 others(5): Show c.4094G>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	2000	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602745	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.41 others(5): Show c.4100G>A	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	2006	chr6	TogoVar
ABT1_chr6_26591953_26605739	26602747	G G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	410	0.0024	0	c.41 others(5): Show c.4102G>T	ABT1	ENSG00000146109.5	transcript	ENST00000274849.3	protein_coding	2008	chr6	TogoVar

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