Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
COA4_chr11_73867667_73881846	73876815	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0021 a0001c0001t0004g0021	1	394	0.0025	0	c.-75 others(3): Show c.-75G>C	COA4	ENSG00000181924.7	transcript	ENST00000355693.5	protein_coding	1/2	3437		chr11	TogoVar
COA5_chr2_98594314_98613512	98608476	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02109.hp2 HG02976.hp1 NA18906.hp1 others(1): Show HG02109.hp2 HG02976.hp1 NA18906.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0016 a0001c0001t0006 a0001c0001t0016	a0001c0001t0006g0021 a0001c0001t0016g0085 a0001c0001t0006g0021 a0001c0001t0016g0085	4	420	0.0095	0	c.-71 others(3): Show c.-71C>T	COA5	ENSG00000183513.9	transcript	ENST00000328709.8	protein_coding	1/3	71		chr2	TogoVar
COA5_chr2_98594314_98613512	98608511	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0086 a0001c0001t0017g0086	1	420	0.0024	0	c.-10 others(4): Show c.-106C>G	COA5	ENSG00000183513.9	transcript	ENST00000328709.8	protein_coding	1/3	106		chr2	TogoVar
COA7_chr1_52679449_52703347	52698341	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00673.hp2 NA19060.hp2 HG00673.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0045 a0001c0001t0014g0046 a0001c0001t0014g0045 a0001c0001t0014g0046	2	416	0.0048	0	c.-15 others(3): Show c.-15G>A	COA7	ENSG00000162377.6	transcript	ENST00000371538.5	protein_coding	1/3	15		chr1	TogoVar
COASY_chr17_42557148_42571277	42562165	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0001 a0002c0002t0005g0001	1	394	0.0025	0	c.-45 others(4): Show c.-458G>A	COASY	ENSG00000068120.15	transcript	ENST00000393818.3	protein_coding	1/9	458		chr17	TogoVar
COASY_chr17_42557148_42571277	42562286	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0003 a0001c0001t0006g0003	1	394	0.0025	0	c.-33 others(4): Show c.-337C>A	COASY	ENSG00000068120.15	transcript	ENST00000393818.3	protein_coding	1/9	337		chr17	TogoVar
COASY_chr17_42557148_42571277	42562338	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0003 a0001c0001t0010g0003	1	394	0.0025	0	c.-28 others(4): Show c.-285A>G	COASY	ENSG00000068120.15	transcript	ENST00000393818.3	protein_coding	1/9	285		chr17	TogoVar
COASY_chr17_42557148_42571277	42562394	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0004 a0002c0002t0009g0004	1	394	0.0025	0	c.-22 others(4): Show c.-229C>T	COASY	ENSG00000068120.15	transcript	ENST00000393818.3	protein_coding	1/9	229		chr17	TogoVar
COASY_chr17_42557148_42571277	42562507	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00408.hp1 NA18964.hp2 NA18979.hp1 others(3): Show HG00408.hp1 NA18964.hp2 NA18979.hp1 NA19068.hp1 NA19070.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0002 a0001c0001t0003g0002	6	394	0.0152	0	c.-11 others(4): Show c.-116C>T	COASY	ENSG00000068120.15	transcript	ENST00000393818.3	protein_coding	1/9	116		chr17	TogoVar
COASY_chr17_42557148_42571277	42562531	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00735.hp1 HG01891.hp1 HG02109.hp1 others(3): Show HG00735.hp1 HG01891.hp1 HG02109.hp1 HG03041.hp2 HG03453.hp1 NA20129.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0001 a0002c0002t0002g0001	6	394	0.0152	0	c.-92 others(3): Show c.-92G>T	COASY	ENSG00000068120.15	transcript	ENST00000393818.3	protein_coding	1/9	92		chr17	TogoVar
COASY_chr17_42557148_42571277	42562535	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0002 a0001c0001t0008g0002	1	394	0.0025	0	c.-88 others(3): Show c.-88C>T	COASY	ENSG00000068120.15	transcript	ENST00000393818.3	protein_coding	1/9	88		chr17	TogoVar
COG2_chr1_230637481_230698982	230642497	AC AC	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00408.hp2 HG00423.hp1 others(133): Show HG00280.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp2 HG00738.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp2 HG01109.hp2 HG01168.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01261.hp2 HG01515.hp1 HG01516.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG02027.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02080.hp2 HG02132.hp1 HG02135.hp2 HG02148.hp1 HG02280.hp2 HG02486.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02723.hp1 HG02735.hp2 HG02738.hp2 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03710.hp2 HG03834.hp2 HG04115.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18747.hp2 NA18942.hp1 NA18944.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18961.hp2 NA18964.hp1 NA18966.hp1 NA18966.hp2 NA18969.hp1 NA18971.hp2 NA18975.hp1 NA18978.hp2 NA18981.hp2 NA18983.hp2 NA18984.hp2 NA18988.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp2 NA18994.hp2 NA19000.hp1 NA19002.hp1 NA19003.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp2 NA19056.hp2 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp2 NA19065.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp1 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19240.hp1 NA19240.hp2 NA20752.hp1	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0001c0002 a0001c0009 others(4): Show a0001c0001 a0001c0002 a0001c0009 a0001c0019 a0001c0020 a0003c0004 a0007c0022	a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 others(6): Show a0001c0001t0002 a0001c0001t0007 a0001c0002t0002 a0001c0002t0004 a0001c0009t0002 a0001c0019t0002 a0001c0020t0004 a0003c0004t0002 a0007c0022t0002	a0001c0001t0002g0005 a0001c0001t0002g0012 a0001c0001t0002g0017 others(100): Show a0001c0001t0002g0005 a0001c0001t0002g0012 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0041 a0001c0001t0002g0043 a0001c0001t0002g0121 a0001c0001t0002g0124 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0145 a0001c0001t0002g0150 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0174 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0207 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0250 a0001c0001t0007g0042 a0001c0002t0002g0155 a0001c0002t0002g0168 a0001c0002t0002g0173 a0001c0002t0002g0175 a0001c0002t0002g0179 a0001c0002t0002g0194 a0001c0002t0002g0202 a0001c0002t0002g0212 a0001c0002t0004g0002 a0001c0002t0004g0006 a0001c0002t0004g0013 a0001c0002t0004g0014 a0001c0002t0004g0015 a0001c0002t0004g0016 a0001c0002t0004g0021 a0001c0002t0004g0040 a0001c0002t0004g0123 a0001c0002t0004g0126 a0001c0002t0004g0128 a0001c0002t0004g0144 a0001c0002t0004g0146 a0001c0002t0004g0147 a0001c0002t0004g0148 a0001c0002t0004g0149 a0001c0002t0004g0151 a0001c0002t0004g0152 a0001c0002t0004g0153 a0001c0002t0004g0154 a0001c0002t0004g0158 a0001c0002t0004g0159 a0001c0002t0004g0160 a0001c0002t0004g0162 a0001c0002t0004g0163 a0001c0002t0004g0166 a0001c0002t0004g0167 a0001c0002t0004g0169 a0001c0002t0004g0170 a0001c0002t0004g0172 a0001c0002t0004g0176 a0001c0002t0004g0177 a0001c0002t0004g0195 a0001c0002t0004g0196 a0001c0002t0004g0204 a0001c0002t0004g0205 a0001c0002t0004g0206 a0001c0002t0004g0242 a0001c0002t0004g0246 a0001c0002t0004g0247 a0001c0002t0004g0280 a0001c0009t0002g0208 a0001c0019t0002g0161 a0001c0020t0004g0203 a0003c0004t0002g0201 a0007c0022t0002g0186	136	406	0.3350	-1	c.-10 others(5): Show c.-104delC	COG2	ENSG00000135775.14	transcript	ENST00000366669.9	protein_coding	1/18	104	INFO_REALIGN_3_PRIME	chr1	TogoVar
COG2_chr1_230637481_230698982	230642499	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19068.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0221 a0001c0001t0008g0221	1	406	0.0025	0	c.-10 others(4): Show c.-108C>T	COG2	ENSG00000135775.14	transcript	ENST00000366669.9	protein_coding	1/18	108		chr1	TogoVar
COG3_chr13_45459939_45541701	45464993	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18974.hp2 NA18974.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0064 a0001c0001t0006g0064	1	342	0.0029	0	c.-44 others(3): Show c.-44T>C	COG3	ENSG00000136152.15	transcript	ENST00000349995.10	protein_coding	1/23	44		chr13	TogoVar
COG6_chr13_39650662_39757628	39655674	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18952.hp2 NA19000.hp2 NA19010.hp2 NA18952.hp2 NA19000.hp2 NA19010.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0276 a0002c0002t0009g0277 a0002c0002t0009g0278 a0002c0002t0009g0276 a0002c0002t0009g0277 a0002c0002t0009g0278	3	370	0.0081	0	c.-53 others(3): Show c.-53T>G	COG6	ENSG00000133103.17	transcript	ENST00000455146.8	protein_coding	1/19	53		chr13	TogoVar
COG6_chr13_39650662_39757628	39655705	A A	AG AG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00323.hp2 HG00423.hp2 HG00438.hp1 others(126): Show HG00323.hp2 HG00423.hp2 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01099.hp2 HG01106.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp1 HG01255.hp2 HG01257.hp2 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02027.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02145.hp2 HG02165.hp2 HG02258.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp1 HG02698.hp2 HG02735.hp1 HG02818.hp1 HG02886.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03490.hp2 HG03540.hp2 HG03579.hp2 HG03669.hp2 HG03688.hp1 HG03710.hp1 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp2 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp2 NA18946.hp1 NA18950.hp2 NA18952.hp2 NA18954.hp2 NA18955.hp1 NA18959.hp2 NA18964.hp1 NA18966.hp1 NA18967.hp1 NA18971.hp2 NA18974.hp1 NA18982.hp2 NA18986.hp2 NA18988.hp1 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA19000.hp2 NA19001.hp1 NA19002.hp2 NA19007.hp2 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19060.hp2 NA19062.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19072.hp2 NA19074.hp2 NA19075.hp1 NA19077.hp2 NA19082.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2	a0002 a0004 a0008 a0002 a0004 a0008	a0002c0002 a0002c0007 a0004c0004 others(1): Show a0002c0002 a0002c0007 a0004c0004 a0008c0010	a0002c0002t0002 a0002c0002t0006 a0002c0002t0007 others(7): Show a0002c0002t0002 a0002c0002t0006 a0002c0002t0007 a0002c0002t0008 a0002c0002t0009 a0002c0002t0011 a0002c0007t0002 a0004c0004t0002 a0004c0004t0007 a0008c0010t0002	a0002c0002t0002g0011 a0002c0002t0002g0230 a0002c0002t0002g0232 others(124): Show a0002c0002t0002g0011 a0002c0002t0002g0230 a0002c0002t0002g0232 a0002c0002t0002g0234 a0002c0002t0002g0235 a0002c0002t0002g0236 a0002c0002t0002g0237 a0002c0002t0002g0238 a0002c0002t0002g0239 a0002c0002t0002g0240 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0246 a0002c0002t0002g0248 a0002c0002t0002g0249 a0002c0002t0002g0250 a0002c0002t0002g0251 a0002c0002t0002g0252 a0002c0002t0002g0257 a0002c0002t0002g0258 a0002c0002t0002g0259 a0002c0002t0002g0260 a0002c0002t0002g0261 a0002c0002t0002g0262 a0002c0002t0002g0264 a0002c0002t0002g0265 a0002c0002t0002g0266 a0002c0002t0002g0267 a0002c0002t0002g0268 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0002g0271 a0002c0002t0002g0272 a0002c0002t0002g0273 a0002c0002t0002g0274 a0002c0002t0002g0275 a0002c0002t0002g0279 a0002c0002t0002g0280 a0002c0002t0002g0281 a0002c0002t0002g0282 a0002c0002t0002g0283 a0002c0002t0002g0284 a0002c0002t0002g0285 a0002c0002t0002g0286 a0002c0002t0002g0287 a0002c0002t0002g0288 a0002c0002t0002g0289 a0002c0002t0002g0290 a0002c0002t0002g0291 a0002c0002t0002g0293 a0002c0002t0002g0294 a0002c0002t0002g0295 a0002c0002t0002g0296 a0002c0002t0002g0297 a0002c0002t0002g0298 a0002c0002t0002g0299 a0002c0002t0002g0301 a0002c0002t0002g0303 a0002c0002t0002g0304 a0002c0002t0002g0305 a0002c0002t0002g0307 a0002c0002t0002g0308 a0002c0002t0002g0309 a0002c0002t0002g0310 a0002c0002t0002g0311 a0002c0002t0002g0312 a0002c0002t0002g0313 a0002c0002t0002g0314 a0002c0002t0002g0315 a0002c0002t0002g0316 a0002c0002t0002g0317 a0002c0002t0002g0318 a0002c0002t0002g0319 a0002c0002t0002g0322 a0002c0002t0002g0323 a0002c0002t0002g0324 a0002c0002t0002g0325 a0002c0002t0002g0327 a0002c0002t0002g0328 a0002c0002t0002g0329 a0002c0002t0002g0331 a0002c0002t0002g0333 a0002c0002t0002g0334 a0002c0002t0002g0336 a0002c0002t0002g0337 a0002c0002t0002g0338 a0002c0002t0002g0339 a0002c0002t0002g0340 a0002c0002t0002g0341 a0002c0002t0002g0342 a0002c0002t0002g0343 a0002c0002t0002g0344 a0002c0002t0002g0345 a0002c0002t0002g0346 a0002c0002t0002g0349 a0002c0002t0002g0350 a0002c0002t0002g0351 a0002c0002t0002g0352 a0002c0002t0002g0353 a0002c0002t0002g0354 a0002c0002t0002g0356 a0002c0002t0006g0231 a0002c0002t0006g0233 a0002c0002t0006g0292 a0002c0002t0006g0302 a0002c0002t0006g0320 a0002c0002t0006g0321 a0002c0002t0006g0326 a0002c0002t0006g0348 a0002c0002t0007g0306 a0002c0002t0007g0330 a0002c0002t0007g0332 a0002c0002t0007g0355 a0002c0002t0008g0241 a0002c0002t0008g0242 a0002c0002t0008g0243 a0002c0002t0008g0335 a0002c0002t0009g0276 a0002c0002t0009g0277 a0002c0002t0009g0278 a0002c0002t0011g0012 a0002c0007t0002g0300 a0004c0004t0002g0254 a0004c0004t0002g0255 a0004c0004t0002g0256 a0004c0004t0007g0253 a0008c0010t0002g0247	129	370	0.3487	1	c.-17 others(4): Show c.-17dupG	COG6	ENSG00000133103.17	transcript	ENST00000455146.8	protein_coding	1/19	16	INFO_REALIGN_3_PRIME	chr13	TogoVar
COG8_chr16_69321428_69344564	69339553	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0023 a0001c0002t0023	a0001c0002t0023g0048 a0001c0002t0023g0048	1	360	0.0028	0	c.-1G others(2): Show c.-1G>A	COG8	ENSG00000213380.16	transcript	ENST00000306875.10	protein_coding	1/6	1		chr16	TogoVar
COG8_chr16_69321428_69344564	69339562	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0047 a0001c0001t0022g0047	1	360	0.0028	0	c.-10 others(3): Show c.-10T>A	COG8	ENSG00000213380.16	transcript	ENST00000306875.10	protein_coding	1/6	10		chr16	TogoVar
COL11A1_chr1_102871473_103113522	103108256	A A	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02572.hp1 HG02717.hp2 HG02895.hp2 others(3): Show HG02572.hp1 HG02717.hp2 HG02895.hp2 HG02897.hp2 HG03540.hp2 NA18522.hp2	a0001 a0010 a0001 a0010	a0001c0008 a0010c0028 a0001c0008 a0010c0028	a0001c0008t0006 a0010c0028t0006 a0001c0008t0006 a0010c0028t0006	a0001c0008t0006g0002 a0001c0008t0006g0003 a0001c0008t0006g0004 others(3): Show a0001c0008t0006g0002 a0001c0008t0006g0003 a0001c0008t0006g0004 a0001c0008t0006g0005 a0001c0008t0006g0006 a0010c0028t0006g0001	6	184	0.0326	0	c.-78 others(3): Show c.-78T>A	COL11A1	ENSG00000060718.22	transcript	ENST00000370096.9	protein_coding	1/67	78		chr1	TogoVar
COL11A2_chr6_33157694_33197467	33192414	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01123.hp1 HG02280.hp2 HG02622.hp1 others(6): Show HG01123.hp1 HG02280.hp2 HG02622.hp1 HG02723.hp1 HG02922.hp1 HG02965.hp2 HG03041.hp2 HG03098.hp1 NA19043.hp2	a0001 a0001	a0001c0008 a0001c0033 a0001c0008 a0001c0033	a0001c0008t0003 a0001c0033t0003 a0001c0008t0003 a0001c0033t0003	a0001c0008t0003g0023 a0001c0008t0003g0031 a0001c0008t0003g0051 others(2): Show a0001c0008t0003g0023 a0001c0008t0003g0031 a0001c0008t0003g0051 a0001c0008t0003g0053 a0001c0033t0003g0052	9	367	0.0245	0	c.-17 others(4): Show c.-174C>A	COL11A2	ENSG00000204248.12	transcript	ENST00000341947.7	protein_coding	1/66	174		chr6	TogoVar
COL11A2_chr6_33157694_33197467	33192440	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp2 HG00738.hp2 HG01175.hp2 others(10): Show HG00140.hp2 HG00738.hp2 HG01175.hp2 NA18946.hp1 NA18949.hp2 NA18950.hp2 NA18962.hp2 NA18975.hp2 NA18988.hp1 NA18994.hp2 NA19000.hp2 NA19011.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0050 a0001c0001t0002g0005 a0001c0001t0002g0050	13	367	0.0354	0	c.-20 others(4): Show c.-200G>A	COL11A2	ENSG00000204248.12	transcript	ENST00000341947.7	protein_coding	1/66	200		chr6	TogoVar
COL12A1_chr6_75079326_75211053	75205972	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0004 a0004	a0004c0012 a0004c0012	a0004c0012t0011 a0004c0012t0011	a0004c0012t0011g0005 a0004c0012t0011g0005	1	206	0.0049	0	c.-23 others(4): Show c.-231C>A	COL12A1	ENSG00000111799.22	transcript	ENST00000322507.13	protein_coding	1/66	3180		chr6	TogoVar
COL13A1_chr10_69796906_69964144	69801967	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01106.hp1 HG03209.hp2 HG06807.hp1 HG01106.hp1 HG03209.hp2 HG06807.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0015 a0001c0001 a0003c0015	a0001c0001t0007 a0003c0015t0011 a0001c0001t0007 a0003c0015t0011	a0001c0001t0007g0006 a0001c0001t0007g0152 a0003c0015t0011g0114 a0001c0001t0007g0006 a0001c0001t0007g0152 a0003c0015t0011g0114	3	324	0.0093	0	c.-45 others(4): Show c.-457C>A	COL13A1	ENSG00000197467.17	transcript	ENST00000645393.2	protein_coding	1/41	457		chr10	TogoVar
COL13A1_chr10_69796906_69964144	69802180	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00735.hp2 HG02055.hp1 HG03098.hp2 HG00735.hp2 HG02055.hp1 HG03098.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0031 a0001c0002 a0002c0031	a0001c0002t0008 a0002c0031t0012 a0001c0002t0008 a0002c0031t0012	a0001c0002t0008g0318 a0001c0002t0008g0319 a0002c0031t0012g0153 a0001c0002t0008g0318 a0001c0002t0008g0319 a0002c0031t0012g0153	3	324	0.0093	0	c.-24 others(4): Show c.-244C>A	COL13A1	ENSG00000197467.17	transcript	ENST00000645393.2	protein_coding	1/41	244		chr10	TogoVar
COL13A1_chr10_69796906_69964144	69802204	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00735.hp2 HG02055.hp1 HG03098.hp2 HG00735.hp2 HG02055.hp1 HG03098.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0031 a0001c0002 a0002c0031	a0001c0002t0008 a0002c0031t0012 a0001c0002t0008 a0002c0031t0012	a0001c0002t0008g0318 a0001c0002t0008g0319 a0002c0031t0012g0153 a0001c0002t0008g0318 a0001c0002t0008g0319 a0002c0031t0012g0153	3	324	0.0093	0	c.-22 others(4): Show c.-220C>T	COL13A1	ENSG00000197467.17	transcript	ENST00000645393.2	protein_coding	1/41	220		chr10	TogoVar
COL13A1_chr10_69796906_69964144	69802338	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp1 HG02257.hp2 HG02280.hp2 others(17): Show HG00639.hp1 HG02257.hp2 HG02280.hp2 HG02622.hp1 HG02717.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19240.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0011	a0001c0002 a0002c0028 a0003c0013 others(2): Show a0001c0002 a0002c0028 a0003c0013 a0003c0023 a0011c0022	a0001c0002t0004 a0001c0002t0014 a0002c0028t0004 others(3): Show a0001c0002t0004 a0001c0002t0014 a0002c0028t0004 a0003c0013t0010 a0003c0023t0004 a0011c0022t0010	a0001c0002t0004g0293 a0001c0002t0004g0295 a0001c0002t0004g0296 others(17): Show a0001c0002t0004g0293 a0001c0002t0004g0295 a0001c0002t0004g0296 a0001c0002t0004g0297 a0001c0002t0004g0298 a0001c0002t0004g0299 a0001c0002t0004g0300 a0001c0002t0004g0302 a0001c0002t0004g0303 a0001c0002t0004g0304 a0001c0002t0004g0305 a0001c0002t0004g0306 a0001c0002t0004g0307 a0001c0002t0004g0310 a0001c0002t0004g0311 a0001c0002t0014g0292 a0002c0028t0004g0294 a0003c0013t0010g0301 a0003c0023t0004g0312 a0011c0022t0010g0232	20	324	0.0617	0	c.-86 others(3): Show c.-86C>T	COL13A1	ENSG00000197467.17	transcript	ENST00000645393.2	protein_coding	1/41	86		chr10	TogoVar
COL14A1_chr8_120120102_120378573	120125120	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02615.hp1 HG03139.hp2 HG02615.hp1 HG03139.hp2	a0002 a0002	a0002c0006 a0002c0006	a0002c0006t0006 a0002c0006t0006	a0002c0006t0006g0212 a0002c0006t0006g0213 a0002c0006t0006g0212 a0002c0006t0006g0213	2	218	0.0092	0	c.-25 others(4): Show c.-258G>C	COL14A1	ENSG00000187955.13	transcript	ENST00000297848.8	protein_coding	1/48	22723		chr8	TogoVar
COL14A1_chr8_120120102_120378573	120125254	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0005 a0001c0001t0010g0005	1	218	0.0046	0	c.-12 others(4): Show c.-124G>A	COL14A1	ENSG00000187955.13	transcript	ENST00000297848.8	protein_coding	1/48	22589		chr8	TogoVar
COL14A1_chr8_120120102_120378573	120147818	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0206 a0001c0001t0020g0206	1	218	0.0046	0	c.-25 others(3): Show c.-25C>T	COL14A1	ENSG00000187955.13	transcript	ENST00000297848.8	protein_coding	2/48	25		chr8	TogoVar
COL15A1_chr9_98938907_99075787	98943915	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02647.hp1 HG02895.hp1 HG02922.hp1 HG02647.hp1 HG02895.hp1 HG02922.hp1	a0002 a0010 a0020 a0002 a0010 a0020	a0002c0003 a0010c0075 a0020c0046 a0002c0003 a0010c0075 a0020c0046	a0002c0003t0007 a0010c0075t0007 a0020c0046t0007 a0002c0003t0007 a0010c0075t0007 a0020c0046t0007	a0002c0003t0007g0003 a0010c0075t0007g0002 a0020c0046t0007g0004 a0002c0003t0007g0003 a0010c0075t0007g0002 a0020c0046t0007g0004	3	310	0.0097	0	c.-14 others(4): Show c.-147C>A	COL15A1	ENSG00000204291.12	transcript	ENST00000375001.8	protein_coding	1/42	147		chr9	TogoVar
COL15A1_chr9_98938907_99075787	98943970	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02735.hp2 NA18971.hp1 HG02735.hp2 NA18971.hp1	a0002 a0050 a0002 a0050	a0002c0069 a0050c0066 a0002c0069 a0050c0066	a0002c0069t0010 a0050c0066t0010 a0002c0069t0010 a0050c0066t0010	a0002c0069t0010g0047 a0050c0066t0010g0048 a0002c0069t0010g0047 a0050c0066t0010g0048	2	310	0.0065	0	c.-92 others(3): Show c.-92C>G	COL15A1	ENSG00000204291.12	transcript	ENST00000375001.8	protein_coding	1/42	92		chr9	TogoVar
COL16A1_chr1_31647263_31709017	31703900	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp2 HG01255.hp2 HG01891.hp2 others(9): Show HG00639.hp2 HG01255.hp2 HG01891.hp2 HG02055.hp2 HG02559.hp2 HG02622.hp2 HG02809.hp2 HG02922.hp2 HG03130.hp2 HG03139.hp1 NA19240.hp1 NA20300.hp2	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0006 a0001c0016 a0001c0017 others(4): Show a0001c0006 a0001c0016 a0001c0017 a0001c0020 a0001c0059 a0004c0011 a0005c0048	a0001c0006t0004 a0001c0016t0003 a0001c0017t0003 others(5): Show a0001c0006t0004 a0001c0016t0003 a0001c0017t0003 a0001c0017t0004 a0001c0020t0004 a0001c0059t0004 a0004c0011t0003 a0005c0048t0008	a0001c0006t0004g0034 a0001c0016t0003g0030 a0001c0016t0003g0039 others(9): Show a0001c0006t0004g0034 a0001c0016t0003g0030 a0001c0016t0003g0039 a0001c0017t0003g0031 a0001c0017t0003g0032 a0001c0017t0004g0035 a0001c0020t0004g0029 a0001c0020t0004g0036 a0001c0059t0004g0033 a0004c0011t0003g0037 a0004c0011t0003g0038 a0005c0048t0008g0040	12	342	0.0351	0	c.-98 others(3): Show c.-98G>A	COL16A1	ENSG00000084636.18	transcript	ENST00000373672.8	protein_coding	1/71	1707		chr1	TogoVar
COL16A1_chr1_31647263_31709017	31703950	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02735.hp2 HG04115.hp2 HG02735.hp2 HG04115.hp2	a0002 a0019 a0002 a0019	a0002c0002 a0019c0033 a0002c0002 a0019c0033	a0002c0002t0007 a0019c0033t0007 a0002c0002t0007 a0019c0033t0007	a0002c0002t0007g0298 a0019c0033t0007g0299 a0002c0002t0007g0298 a0019c0033t0007g0299	2	342	0.0059	0	c.-14 others(4): Show c.-148C>T	COL16A1	ENSG00000084636.18	transcript	ENST00000373672.8	protein_coding	1/71	1757		chr1	TogoVar
COL1A1_chr17_50179101_50206631	50201536	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18944.hp1 NA18964.hp1 NA18944.hp1 NA18964.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0025 a0001c0001t0024 a0001c0001t0025	a0001c0001t0024g0055 a0001c0001t0025g0056 a0001c0001t0024g0055 a0001c0001t0025g0056	2	448	0.0045	0	c.-23 others(3): Show c.-23G>A	COL1A1	ENSG00000108821.14	transcript	ENST00000225964.10	protein_coding	1/51	23		chr17	TogoVar
COL21A1_chr6_56051590_56252580	56182624	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02486.hp2 HG02896.hp1 HG02486.hp2 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0057 a0001c0001t0015g0083 a0001c0001t0015g0057 a0001c0001t0015g0083	2	264	0.0076	0	c.-6A others(2): Show c.-6A>G	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	2/30	6		chr6	TogoVar
COL21A1_chr6_56051590_56252580	56182640	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp1 HG00735.hp1 HG01168.hp2 others(9): Show HG00639.hp1 HG00735.hp1 HG01168.hp2 HG01169.hp1 HG01884.hp2 HG02615.hp1 HG02622.hp1 HG03098.hp1 HG03471.hp2 NA18522.hp2 NA19043.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012	a0001c0001t0008g0036 a0001c0001t0008g0041 a0001c0001t0008g0042 others(9): Show a0001c0001t0008g0036 a0001c0001t0008g0041 a0001c0001t0008g0042 a0001c0001t0008g0054 a0001c0001t0008g0058 a0001c0001t0008g0059 a0001c0001t0008g0061 a0001c0001t0011g0007 a0001c0001t0011g0008 a0001c0001t0011g0025 a0001c0001t0012g0002 a0001c0001t0012g0003	12	264	0.0455	0	c.-22 others(3): Show c.-22A>G	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	2/30	22		chr6	TogoVar
COL21A1_chr6_56051590_56252580	56247415	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00733.hp2 HG01168.hp2 HG01169.hp1 others(16): Show HG00733.hp2 HG01168.hp2 HG01169.hp1 HG01258.hp1 HG01361.hp2 HG01928.hp2 HG02257.hp1 HG02258.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02735.hp2 HG02922.hp1 HG02965.hp1 HG02976.hp1 NA18965.hp1 NA19089.hp2	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0013	a0001c0001 a0001c0002 a0001c0014 others(4): Show a0001c0001 a0001c0002 a0001c0014 a0002c0003 a0002c0008 a0010c0019 a0013c0023	a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 others(6): Show a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0002t0010 a0001c0014t0010 a0002c0003t0006 a0002c0008t0006 a0010c0019t0006 a0013c0023t0010	a0001c0001t0006g0009 a0001c0001t0006g0012 a0001c0001t0006g0013 others(16): Show a0001c0001t0006g0009 a0001c0001t0006g0012 a0001c0001t0006g0013 a0001c0001t0006g0014 a0001c0001t0006g0015 a0001c0001t0006g0018 a0001c0001t0006g0019 a0001c0001t0006g0020 a0001c0001t0006g0022 a0001c0001t0010g0016 a0001c0001t0011g0007 a0001c0001t0011g0008 a0001c0001t0011g0025 a0001c0002t0010g0017 a0001c0014t0010g0010 a0002c0003t0006g0023 a0002c0008t0006g0021 a0010c0019t0006g0024 a0013c0023t0010g0011	19	264	0.0720	0	c.-67 others(3): Show c.-67G>C	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	1/30	64797		chr6	TogoVar
COL21A1_chr6_56051590_56252580	56247475	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0011 a0011	a0011c0021 a0011c0021	a0011c0021t0020 a0011c0021t0020	a0011c0021t0020g0095 a0011c0021t0020g0095	1	264	0.0038	0	c.-12 others(4): Show c.-127G>A	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	1/30	64857		chr6	TogoVar
COL21A1_chr6_56051590_56252580	56247517	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0094 a0001c0002t0019g0094	1	264	0.0038	0	c.-16 others(4): Show c.-169G>A	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	1/30	64899		chr6	TogoVar
COL21A1_chr6_56051590_56252580	56247545	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp1 HG00733.hp2 HG00735.hp1 others(86): Show HG00639.hp1 HG00733.hp2 HG00735.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01106.hp1 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01258.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01517.hp2 HG01884.hp2 HG01928.hp2 HG01978.hp2 HG02040.hp1 HG02132.hp1 HG02155.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp1 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03491.hp2 HG03540.hp1 HG03669.hp1 HG03669.hp2 HG03927.hp2 HG04115.hp2 HG06807.hp1 NA18522.hp2 NA18747.hp2 NA18943.hp1 NA18965.hp1 NA18965.hp2 NA18968.hp2 NA18971.hp1 NA18975.hp1 NA18979.hp2 NA18981.hp2 NA18995.hp2 NA19005.hp1 NA19043.hp1 NA19043.hp2 NA19089.hp2 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0010 a0013	a0001c0001 a0001c0002 a0001c0007 others(13): Show a0001c0001 a0001c0002 a0001c0007 a0001c0014 a0001c0022 a0002c0003 a0002c0008 a0003c0005 a0004c0004 a0004c0016 a0005c0009 a0006c0011 a0007c0010 a0008c0012 a0010c0019 a0013c0023	a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 others(27): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0002t0003 a0001c0002t0004 a0001c0002t0010 a0001c0007t0004 a0001c0014t0010 a0001c0022t0003 a0002c0003t0003 a0002c0003t0006 a0002c0008t0003 a0002c0008t0006 a0003c0005t0014 a0004c0004t0004 a0004c0016t0004 a0005c0009t0004 a0006c0011t0004 a0007c0010t0003 a0008c0012t0004 a0010c0019t0006 a0013c0023t0010	a0001c0001t0003g0029 a0001c0001t0003g0037 a0001c0001t0003g0038 others(86): Show a0001c0001t0003g0029 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0043 a0001c0001t0003g0045 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0062 a0001c0001t0003g0064 a0001c0001t0003g0066 a0001c0001t0003g0074 a0001c0001t0003g0076 a0001c0001t0003g0078 a0001c0001t0003g0081 a0001c0001t0003g0082 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0092 a0001c0001t0003g0093 a0001c0001t0004g0073 a0001c0001t0004g0084 a0001c0001t0006g0009 a0001c0001t0006g0012 a0001c0001t0006g0013 a0001c0001t0006g0014 a0001c0001t0006g0015 a0001c0001t0006g0018 a0001c0001t0006g0019 a0001c0001t0006g0020 a0001c0001t0006g0022 a0001c0001t0008g0036 a0001c0001t0008g0041 a0001c0001t0008g0042 a0001c0001t0008g0054 a0001c0001t0008g0058 a0001c0001t0008g0059 a0001c0001t0008g0061 a0001c0001t0009g0031 a0001c0001t0009g0033 a0001c0001t0009g0034 a0001c0001t0009g0039 a0001c0001t0009g0040 a0001c0001t0010g0016 a0001c0001t0011g0007 a0001c0001t0011g0008 a0001c0001t0011g0025 a0001c0001t0012g0002 a0001c0001t0012g0003 a0001c0001t0014g0087 a0001c0001t0015g0057 a0001c0001t0015g0083 a0001c0001t0018g0032 a0001c0002t0003g0080 a0001c0002t0004g0027 a0001c0002t0004g0046 a0001c0002t0004g0050 a0001c0002t0004g0051 a0001c0002t0004g0052 a0001c0002t0004g0053 a0001c0002t0004g0068 a0001c0002t0004g0075 a0001c0002t0004g0089 a0001c0002t0010g0017 a0001c0007t0004g0065 a0001c0007t0004g0067 a0001c0007t0004g0077 a0001c0014t0010g0010 a0001c0022t0003g0063 a0002c0003t0003g0044 a0002c0003t0003g0071 a0002c0003t0006g0023 a0002c0008t0003g0060 a0002c0008t0006g0021 a0003c0005t0014g0035 a0004c0004t0004g0026 a0004c0004t0004g0028 a0004c0004t0004g0088 a0004c0016t0004g0079 a0005c0009t0004g0055 a0005c0009t0004g0056 a0005c0009t0004g0072 a0006c0011t0004g0090 a0006c0011t0004g0091 a0007c0010t0003g0069 a0007c0010t0003g0070 a0008c0012t0004g0030 a0010c0019t0006g0024 a0013c0023t0010g0011	89	264	0.3371	0	c.-19 others(4): Show c.-197G>C	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	1/30	64927		chr6	TogoVar
COL21A1_chr6_56051590_56252580	56247559	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp1 HG03195.hp1 HG03209.hp2 others(2): Show HG01884.hp1 HG03195.hp1 HG03209.hp2 HG03471.hp2 NA19043.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0012 a0004c0004t0013 a0004c0004t0017 a0001c0001t0012 a0004c0004t0013 a0004c0004t0017	a0001c0001t0012g0002 a0001c0001t0012g0003 a0004c0004t0013g0004 others(2): Show a0001c0001t0012g0002 a0001c0001t0012g0003 a0004c0004t0013g0004 a0004c0004t0013g0005 a0004c0004t0017g0006	5	264	0.0189	0	c.-21 others(4): Show c.-211T>C	COL21A1	ENSG00000124749.18	transcript	ENST00000244728.10	protein_coding	1/30	64941		chr6	TogoVar
COL22A1_chr8_138583235_138919041	138883197	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0002 a0002	a0002c0009 a0002c0009	a0002c0009t0015 a0002c0009t0015	a0002c0009t0015g0146 a0002c0009t0015g0146	1	158	0.0063	0	c.-25 others(3): Show c.-25G>T	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	2/65	25		chr8	TogoVar
COL22A1_chr8_138583235_138919041	138913634	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0024 a0001c0024	a0001c0024t0016 a0001c0024t0016	a0001c0024t0016g0158 a0001c0024t0016g0158	1	158	0.0063	0	c.-88 others(3): Show c.-88A>G	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	1/65	30462		chr8	TogoVar
COL22A1_chr8_138583235_138919041	138913755	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp2 HG00639.hp2 HG01081.hp1 others(11): Show HG00280.hp2 HG00639.hp2 HG01081.hp1 HG01099.hp2 HG01167.hp2 HG01361.hp1 HG02258.hp2 HG02976.hp2 HG03195.hp2 HG03492.hp2 HG03688.hp2 HG04199.hp1 HG06807.hp1 NA20752.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0012 others(7): Show a0001c0001 a0001c0002 a0001c0012 a0001c0028 a0002c0003 a0002c0005 a0002c0007 a0002c0025 a0003c0013 a0003c0020	a0001c0001t0003 a0001c0002t0003 a0001c0012t0010 others(7): Show a0001c0001t0003 a0001c0002t0003 a0001c0012t0010 a0001c0028t0003 a0002c0003t0003 a0002c0005t0003 a0002c0007t0003 a0002c0025t0003 a0003c0013t0003 a0003c0020t0003	a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0002t0003g0009 others(11): Show a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0002t0003g0009 a0001c0012t0010g0012 a0001c0028t0003g0008 a0002c0003t0003g0001 a0002c0003t0003g0011 a0002c0005t0003g0005 a0002c0005t0003g0007 a0002c0007t0003g0010 a0002c0025t0003g0013 a0003c0013t0003g0002 a0003c0013t0003g0006 a0003c0020t0003g0014	14	158	0.0886	0	c.-20 others(4): Show c.-209G>C	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	1/65	30583		chr8	TogoVar
COL22A1_chr8_138583235_138919041	138914039	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00735.hp2 HG01167.hp1 HG02523.hp2 others(16): Show HG00735.hp2 HG01167.hp1 HG02523.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp1 HG02896.hp1 HG02922.hp2 HG02965.hp2 HG03098.hp1 HG03209.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG03704.hp2 NA18906.hp1 NA19060.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0008 a0014	a0001c0001 a0001c0002 a0001c0010 others(11): Show a0001c0001 a0001c0002 a0001c0010 a0001c0012 a0001c0017 a0001c0024 a0002c0003 a0002c0007 a0002c0009 a0002c0011 a0003c0020 a0004c0019 a0008c0055 a0014c0042	a0001c0001t0005 a0001c0002t0005 a0001c0002t0007 others(13): Show a0001c0001t0005 a0001c0002t0005 a0001c0002t0007 a0001c0010t0007 a0001c0012t0005 a0001c0017t0005 a0001c0017t0007 a0001c0024t0016 a0002c0003t0007 a0002c0007t0005 a0002c0009t0015 a0002c0011t0005 a0003c0020t0007 a0004c0019t0014 a0008c0055t0005 a0014c0042t0013	a0001c0001t0005g0142 a0001c0002t0005g0141 a0001c0002t0005g0151 others(16): Show a0001c0001t0005g0142 a0001c0002t0005g0141 a0001c0002t0005g0151 a0001c0002t0005g0153 a0001c0002t0007g0156 a0001c0010t0007g0155 a0001c0012t0005g0143 a0001c0017t0005g0149 a0001c0017t0005g0152 a0001c0017t0007g0147 a0001c0024t0016g0158 a0002c0003t0007g0157 a0002c0007t0005g0145 a0002c0009t0015g0146 a0002c0011t0005g0144 a0003c0020t0007g0150 a0004c0019t0014g0154 a0008c0055t0005g0148 a0014c0042t0013g0140	19	158	0.1203	0	c.-49 others(4): Show c.-493C>T	COL22A1	ENSG00000169436.18	transcript	ENST00000303045.11	protein_coding	1/65	30867		chr8	TogoVar
COL23A1_chr5_178232618_178595393	178590320	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0224 a0001c0001t0014g0224	1	236	0.0042	0	c.-12 others(4): Show c.-123C>G	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	1/29	123		chr5	TogoVar
COL23A1_chr5_178232618_178595393	178590333	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02055.hp1 HG02145.hp2 HG02258.hp2 others(9): Show HG02055.hp1 HG02145.hp2 HG02258.hp2 HG02280.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02922.hp1 HG02965.hp1 HG03209.hp1 HG03209.hp2 HG03516.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0021 a0002c0002 others(4): Show a0001c0001 a0001c0021 a0002c0002 a0002c0003 a0002c0009 a0002c0022 a0003c0023	a0001c0001t0006 a0001c0021t0006 a0002c0002t0009 others(7): Show a0001c0001t0006 a0001c0021t0006 a0002c0002t0009 a0002c0002t0010 a0002c0003t0006 a0002c0003t0008 a0002c0009t0006 a0002c0009t0008 a0002c0022t0009 a0003c0023t0010	a0001c0001t0006g0226 a0001c0001t0006g0227 a0001c0001t0006g0230 others(9): Show a0001c0001t0006g0226 a0001c0001t0006g0227 a0001c0001t0006g0230 a0001c0021t0006g0234 a0002c0002t0009g0225 a0002c0002t0010g0228 a0002c0003t0006g0229 a0002c0003t0008g0231 a0002c0009t0006g0232 a0002c0009t0008g0235 a0002c0022t0009g0233 a0003c0023t0010g0236	12	236	0.0509	0	c.-13 others(4): Show c.-136A>C	COL23A1	ENSG00000050767.18	transcript	ENST00000390654.8	protein_coding	1/29	136		chr5	TogoVar
COL24A1_chr1_85724233_86161772	86156602	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01071.hp1 HG01891.hp1 HG02630.hp2 others(13): Show HG01071.hp1 HG01891.hp1 HG02630.hp2 HG02886.hp2 HG02897.hp1 HG03225.hp2 HG03239.hp2 NA18946.hp2 NA18951.hp1 NA18960.hp2 NA18981.hp1 NA18984.hp1 NA18995.hp1 NA19011.hp1 NA19090.hp2 NA20129.hp2	a0003 a0004 a0006 others(5): Show a0003 a0004 a0006 a0022 a0033 a0034 a0036 a0037	a0003c0016 a0003c0024 a0004c0002 others(7): Show a0003c0016 a0003c0024 a0004c0002 a0006c0017 a0006c0047 a0022c0030 a0033c0045 a0034c0053 a0036c0055 a0037c0046	a0003c0016t0005 a0003c0016t0006 a0003c0024t0005 others(9): Show a0003c0016t0005 a0003c0016t0006 a0003c0024t0005 a0004c0002t0007 a0006c0017t0005 a0006c0017t0006 a0006c0047t0005 a0022c0030t0006 a0033c0045t0005 a0034c0053t0009 a0036c0055t0009 a0037c0046t0006	a0003c0016t0005g0012 a0003c0016t0006g0013 a0003c0024t0005g0014 others(13): Show a0003c0016t0005g0012 a0003c0016t0006g0013 a0003c0024t0005g0014 a0003c0024t0005g0015 a0004c0002t0007g0001 a0004c0002t0007g0002 a0004c0002t0007g0004 a0006c0017t0005g0011 a0006c0017t0005g0016 a0006c0017t0006g0009 a0006c0047t0005g0010 a0022c0030t0006g0003 a0033c0045t0005g0008 a0034c0053t0009g0006 a0036c0055t0009g0005 a0037c0046t0006g0007	16	238	0.0672	0	c.-20 others(4): Show c.-206G>A	COL24A1	ENSG00000171502.15	transcript	ENST00000370571.7	protein_coding	1/60	206		chr1	TogoVar
COL25A1_chr4_108803725_109307658	109302214	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0035 a0001c0001t0020g0035	1	130	0.0077	0	c.-10 others(4): Show c.-102C>T	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	1/38	195		chr4	TogoVar
COL25A1_chr4_108803725_109307658	109302577	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(92): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00558.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01109.hp1 HG01167.hp1 HG01167.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01993.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03927.hp2 HG03942.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18952.hp2 NA18998.hp1 NA18998.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19062.hp2 NA19079.hp1 NA19086.hp2 NA20129.hp1 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0009 a0002c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0002t0001 a0001c0002t0005 a0001c0002t0007 a0001c0002t0008 a0001c0002t0013 a0001c0002t0021 a0001c0002t0022 a0001c0002t0025 a0001c0003t0001 a0001c0003t0008 a0001c0003t0023 a0001c0003t0024 a0001c0004t0001 a0001c0004t0002 a0001c0004t0029 a0001c0005t0002 a0001c0005t0005 a0001c0009t0002 a0002c0011t0007	a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0048 others(92): Show a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0048 a0001c0001t0001g0059 a0001c0001t0001g0062 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0074 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0092 a0001c0001t0001g0099 a0001c0001t0001g0103 a0001c0001t0001g0114 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0002g0054 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0063 a0001c0001t0002g0071 a0001c0001t0002g0075 a0001c0001t0002g0085 a0001c0001t0002g0088 a0001c0001t0002g0091 a0001c0001t0002g0094 a0001c0001t0002g0100 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0111 a0001c0001t0002g0113 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0120 a0001c0001t0002g0126 a0001c0001t0002g0129 a0001c0001t0005g0077 a0001c0001t0005g0078 a0001c0001t0006g0049 a0001c0001t0006g0051 a0001c0001t0006g0064 a0001c0001t0006g0072 a0001c0001t0006g0076 a0001c0001t0007g0090 a0001c0001t0011g0044 a0001c0001t0011g0047 a0001c0001t0012g0096 a0001c0001t0012g0106 a0001c0001t0026g0046 a0001c0001t0027g0086 a0001c0001t0028g0084 a0001c0002t0001g0038 a0001c0002t0001g0039 a0001c0002t0001g0052 a0001c0002t0001g0066 a0001c0002t0001g0089 a0001c0002t0001g0093 a0001c0002t0001g0098 a0001c0002t0001g0101 a0001c0002t0001g0110 a0001c0002t0001g0125 a0001c0002t0001g0130 a0001c0002t0005g0042 a0001c0002t0005g0065 a0001c0002t0005g0112 a0001c0002t0007g0115 a0001c0002t0008g0060 a0001c0002t0008g0087 a0001c0002t0013g0067 a0001c0002t0013g0070 a0001c0002t0021g0082 a0001c0002t0022g0073 a0001c0002t0025g0050 a0001c0003t0001g0053 a0001c0003t0001g0055 a0001c0003t0001g0057 a0001c0003t0001g0107 a0001c0003t0008g0036 a0001c0003t0023g0127 a0001c0003t0024g0045 a0001c0004t0001g0040 a0001c0004t0001g0043 a0001c0004t0001g0128 a0001c0004t0002g0083 a0001c0004t0029g0095 a0001c0005t0002g0123 a0001c0005t0002g0124 a0001c0005t0005g0122 a0001c0009t0002g0097 a0002c0011t0007g0061	95	130	0.7308	0	c.-46 others(4): Show c.-465A>C	COL25A1	ENSG00000188517.17	transcript	ENST00000399132.6	protein_coding	1/38	558		chr4	TogoVar

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