JoGo: Joint Open Genome and Omics Platform

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AGAP1_chr2_235489043_236136793	236127905	T T	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01496.hp2 HG02572.hp1 HG02647.hp2 others(6): Show HG01496.hp2 HG02572.hp1 HG02647.hp2 HG02818.hp2 HG02896.hp2 HG03453.hp1 NA18522.hp2 NA19030.hp2 NA20300.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0004 a0001c0002t0013 a0001c0002t0039 others(3): Show a0001c0002t0004 a0001c0002t0013 a0001c0002t0039 a0001c0005t0004 a0001c0005t0013 a0001c0005t0040	a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 others(6): Show a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0039g0059 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0005t0040g0006	9	98	0.0918	0	c.37 others(5): Show c.3783T>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3783		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236127908	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03540.hp2 NA19240.hp1 NA21309.hp1 HG03540.hp2 NA19240.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0024 a0001c0003t0020 a0001c0003t0025 a0001c0001t0024 a0001c0003t0020 a0001c0003t0025	a0001c0001t0024g0077 a0001c0003t0020g0053 a0001c0003t0025g0015 a0001c0001t0024g0077 a0001c0003t0020g0053 a0001c0003t0025g0015	3	98	0.0306	0	c.37 others(5): Show c.3786G>A	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3786		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236127920	C C	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0023 a0002c0007t0023	a0002c0007t0023g0085 a0002c0007t0023g0085	1	98	0.0102	0	c.37 others(5): Show c.3798C>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3798		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236127946	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0037 a0001c0006t0037	a0001c0006t0037g0021 a0001c0006t0037g0021	1	98	0.0102	0	c.38 others(5): Show c.3824A>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3824		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128001	C C	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0037 a0001c0006t0037	a0001c0006t0037g0021 a0001c0006t0037g0021	1	98	0.0102	0	c.38 others(5): Show c.3879C>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3879		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128075	A A	AC AC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp2 HG01192.hp2 HG01496.hp2 others(19): Show HG00438.hp2 HG01192.hp2 HG01496.hp2 HG01884.hp2 HG01928.hp1 HG01928.hp2 HG02080.hp2 HG02109.hp1 HG02135.hp1 HG02280.hp1 HG02630.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02976.hp1 HG03098.hp2 HG03195.hp1 HG03516.hp1 HG03516.hp2 HG03831.hp1 HG03831.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0011 a0001c0012 a0001c0016 a0001c0018 a0001c0019 a0002c0004 a0002c0007	a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 others(16): Show a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0002t0006 a0001c0002t0013 a0001c0002t0032 a0001c0003t0009 a0001c0003t0021 a0001c0005t0013 a0001c0005t0031 a0001c0006t0006 a0001c0011t0036 a0001c0012t0009 a0001c0016t0007 a0001c0018t0049 a0001c0019t0007 a0002c0004t0006 a0002c0007t0005 a0002c0007t0023	a0001c0001t0005g0007 a0001c0001t0005g0012 a0001c0001t0007g0008 others(19): Show a0001c0001t0005g0007 a0001c0001t0005g0012 a0001c0001t0007g0008 a0001c0001t0009g0074 a0001c0002t0006g0093 a0001c0002t0013g0035 a0001c0002t0032g0051 a0001c0003t0009g0096 a0001c0003t0021g0023 a0001c0005t0013g0050 a0001c0005t0031g0031 a0001c0006t0006g0019 a0001c0011t0036g0009 a0001c0012t0009g0078 a0001c0016t0007g0089 a0001c0018t0049g0080 a0001c0019t0007g0056 a0002c0004t0006g0024 a0002c0004t0006g0042 a0002c0007t0005g0026 a0002c0007t0005g0094 a0002c0007t0023g0085	22	98	0.2245	1	c.39 others(6): Show c.3965dupC	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3966	INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128075	A A	ACC ACC	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00642.hp1 HG01123.hp2 others(7): Show HG00438.hp1 HG00642.hp1 HG01123.hp2 HG02083.hp1 HG02135.hp2 HG02622.hp1 HG02818.hp1 HG03098.hp1 HG03453.hp2 HG04199.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(5): Show a0001c0001 a0001c0002 a0001c0006 a0001c0009 a0001c0014 a0001c0017 a0002c0007 a0002c0013	a0001c0001t0008 a0001c0002t0034 a0001c0002t0038 others(7): Show a0001c0001t0008 a0001c0002t0034 a0001c0002t0038 a0001c0006t0033 a0001c0009t0017 a0001c0014t0016 a0001c0017t0008 a0002c0007t0008 a0002c0007t0018 a0002c0013t0041	a0001c0001t0008g0069 a0001c0002t0034g0084 a0001c0002t0038g0086 others(7): Show a0001c0001t0008g0069 a0001c0002t0034g0084 a0001c0002t0038g0086 a0001c0006t0033g0087 a0001c0009t0017g0037 a0001c0014t0016g0048 a0001c0017t0008g0092 a0002c0007t0008g0011 a0002c0007t0018g0028 a0002c0013t0041g0081	10	98	0.1020	2	c.39 others(13): Show c.3964_*3965dupCC	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3966	INFO_REALIGN_3_PRIME	chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128075	A A	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03471.hp2 NA20129.hp1 HG03471.hp2 NA20129.hp1	a0001 a0001	a0001c0003 a0001c0009 a0001c0003 a0001c0009	a0001c0003t0022 a0001c0009t0015 a0001c0003t0022 a0001c0009t0015	a0001c0003t0022g0055 a0001c0009t0015g0038 a0001c0003t0022g0055 a0001c0009t0015g0038	2	98	0.0204	0	c.39 others(5): Show c.3953A>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3953		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128081	C C	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02109.hp2 HG02145.hp2 HG03139.hp2 others(1): Show HG02109.hp2 HG02145.hp2 HG03139.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0011 a0001c0001t0010 a0001c0001t0011	a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 others(1): Show a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0011g0098	4	98	0.0408	0	c.39 others(5): Show c.3959C>A	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3959		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128087	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0065 a0001c0001t0019g0065	1	98	0.0102	0	c.39 others(5): Show c.3965C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	3965		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128316	C C	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01496.hp2 HG02572.hp1 HG02622.hp2 others(6): Show HG01496.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp2 HG02818.hp2 HG02896.hp2 HG03453.hp1 NA18522.hp2 NA20300.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0004 a0001c0002t0013 a0001c0002t0039 others(3): Show a0001c0002t0004 a0001c0002t0013 a0001c0002t0039 a0001c0002t0043 a0001c0005t0004 a0001c0005t0013	a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 others(6): Show a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0039g0059 a0001c0002t0043g0064 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050	9	98	0.0918	0	c.41 others(5): Show c.4194C>A	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4194		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128454	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02622.hp1 HG03098.hp1 HG02622.hp1 HG03098.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0013 a0001c0002 a0002c0013	a0001c0002t0038 a0002c0013t0041 a0001c0002t0038 a0002c0013t0041	a0001c0002t0038g0086 a0002c0013t0041g0081 a0001c0002t0038g0086 a0002c0013t0041g0081	2	98	0.0204	0	c.43 others(5): Show c.4332T>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4332		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128581	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03471.hp2 NA20129.hp1 HG03471.hp2 NA20129.hp1	a0001 a0001	a0001c0003 a0001c0009 a0001c0003 a0001c0009	a0001c0003t0022 a0001c0009t0015 a0001c0003t0022 a0001c0009t0015	a0001c0003t0022g0055 a0001c0009t0015g0038 a0001c0003t0022g0055 a0001c0009t0015g0038	2	98	0.0204	0	c.44 others(5): Show c.4459C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4459		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128602	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00741.hp1 HG01123.hp1 HG02809.hp2 HG00741.hp1 HG01123.hp1 HG02809.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0006 a0002c0004 a0001c0002 a0001c0006 a0002c0004	a0001c0002t0032 a0001c0006t0046 a0002c0004t0030 a0001c0002t0032 a0001c0006t0046 a0002c0004t0030	a0001c0002t0032g0051 a0001c0006t0046g0040 a0002c0004t0030g0045 a0001c0002t0032g0051 a0001c0006t0046g0040 a0002c0004t0030g0045	3	98	0.0306	0	c.44 others(5): Show c.4480C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4480		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128631	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00642.hp1 others(45): Show HG00438.hp1 HG00438.hp2 HG00642.hp1 HG01192.hp1 HG01496.hp2 HG01884.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02280.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03831.hp1 HG03831.hp2 HG04199.hp2 NA18522.hp2 NA18906.hp1 NA19030.hp1 NA19030.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0009 a0001c0012 a0001c0014 a0001c0016 a0001c0017 a0001c0019 a0002c0007 a0002c0013	a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 others(35): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0027 a0001c0001t0044 a0001c0001t0048 a0001c0002t0004 a0001c0002t0013 a0001c0002t0032 a0001c0002t0038 a0001c0002t0039 a0001c0003t0003 a0001c0003t0009 a0001c0003t0012 a0001c0003t0021 a0001c0003t0022 a0001c0005t0004 a0001c0005t0013 a0001c0005t0040 a0001c0006t0037 a0001c0009t0015 a0001c0009t0017 a0001c0012t0009 a0001c0014t0016 a0001c0016t0007 a0001c0017t0008 a0001c0019t0007 a0002c0007t0005 a0002c0007t0008 a0002c0007t0018 a0002c0007t0023 a0002c0013t0041	a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 others(45): Show a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0005g0012 a0001c0001t0007g0008 a0001c0001t0008g0069 a0001c0001t0009g0074 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0011g0098 a0001c0001t0012g0071 a0001c0001t0019g0065 a0001c0001t0027g0062 a0001c0001t0044g0041 a0001c0001t0048g0054 a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0032g0051 a0001c0002t0038g0086 a0001c0002t0039g0059 a0001c0003t0003g0001 a0001c0003t0009g0096 a0001c0003t0012g0066 a0001c0003t0021g0023 a0001c0003t0022g0055 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0005t0040g0006 a0001c0006t0037g0021 a0001c0009t0015g0038 a0001c0009t0017g0037 a0001c0012t0009g0078 a0001c0014t0016g0048 a0001c0016t0007g0089 a0001c0017t0008g0092 a0001c0019t0007g0056 a0002c0007t0005g0026 a0002c0007t0005g0094 a0002c0007t0008g0011 a0002c0007t0018g0028 a0002c0007t0023g0085 a0002c0013t0041g0081	48	98	0.4898	0	c.45 others(5): Show c.4509T>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4509		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128696	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00438.hp2 HG00642.hp1 others(47): Show HG00438.hp1 HG00438.hp2 HG00642.hp1 HG01192.hp1 HG01496.hp2 HG01884.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02280.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02818.hp1 HG02818.hp2 HG02896.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03831.hp1 HG03831.hp2 HG04199.hp2 NA18522.hp2 NA18906.hp1 NA19030.hp1 NA19030.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(12): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0009 a0001c0011 a0001c0012 a0001c0014 a0001c0016 a0001c0017 a0001c0018 a0001c0019 a0002c0007 a0002c0013	a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 others(37): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0027 a0001c0001t0044 a0001c0001t0048 a0001c0002t0004 a0001c0002t0013 a0001c0002t0038 a0001c0002t0039 a0001c0002t0043 a0001c0003t0003 a0001c0003t0009 a0001c0003t0012 a0001c0003t0021 a0001c0003t0022 a0001c0005t0004 a0001c0005t0013 a0001c0005t0040 a0001c0006t0037 a0001c0009t0015 a0001c0009t0017 a0001c0011t0036 a0001c0012t0009 a0001c0014t0016 a0001c0016t0007 a0001c0017t0008 a0001c0018t0049 a0001c0019t0007 a0002c0007t0005 a0002c0007t0008 a0002c0007t0018 a0002c0007t0023 a0002c0013t0041	a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 others(47): Show a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0005g0012 a0001c0001t0007g0008 a0001c0001t0008g0069 a0001c0001t0009g0074 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0011g0098 a0001c0001t0012g0071 a0001c0001t0019g0065 a0001c0001t0027g0062 a0001c0001t0044g0041 a0001c0001t0048g0054 a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0038g0086 a0001c0002t0039g0059 a0001c0002t0043g0064 a0001c0003t0003g0001 a0001c0003t0009g0096 a0001c0003t0012g0066 a0001c0003t0021g0023 a0001c0003t0022g0055 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0005t0040g0006 a0001c0006t0037g0021 a0001c0009t0015g0038 a0001c0009t0017g0037 a0001c0011t0036g0009 a0001c0012t0009g0078 a0001c0014t0016g0048 a0001c0016t0007g0089 a0001c0017t0008g0092 a0001c0018t0049g0080 a0001c0019t0007g0056 a0002c0007t0005g0026 a0002c0007t0005g0094 a0002c0007t0008g0011 a0002c0007t0018g0028 a0002c0007t0023g0085 a0002c0013t0041g0081	50	98	0.5102	0	c.45 others(5): Show c.4574A>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4574		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128705	A A	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0043 a0001c0002t0043	a0001c0002t0043g0064 a0001c0002t0043g0064	1	98	0.0102	0	c.45 others(5): Show c.4583A>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4583		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236128956	C C	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0048 a0001c0001t0048	a0001c0001t0048g0054 a0001c0001t0048g0054	1	98	0.0102	0	c.48 others(5): Show c.4834C>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	4834		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236129238	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0015 a0001c0009t0015	a0001c0009t0015g0038 a0001c0009t0015g0038	1	98	0.0102	0	c.51 others(5): Show c.5116C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	5116		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236129381	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02109.hp2 HG03139.hp2 HG03471.hp1 HG02109.hp2 HG03139.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0048 a0001c0001t0011 a0001c0001t0048	a0001c0001t0011g0020 a0001c0001t0011g0098 a0001c0001t0048g0054 a0001c0001t0011g0020 a0001c0001t0011g0098 a0001c0001t0048g0054	3	98	0.0306	0	c.52 others(5): Show c.5259C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	5259		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236129559	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02647.hp1 HG02717.hp1 HG02976.hp1 others(2): Show HG02647.hp1 HG02717.hp1 HG02976.hp1 HG03453.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0014 others(2): Show a0001c0001 a0001c0002 a0001c0014 a0001c0016 a0001c0019	a0001c0001t0007 a0001c0002t0042 a0001c0014t0016 others(2): Show a0001c0001t0007 a0001c0002t0042 a0001c0014t0016 a0001c0016t0007 a0001c0019t0007	a0001c0001t0007g0008 a0001c0002t0042g0067 a0001c0014t0016g0048 others(2): Show a0001c0001t0007g0008 a0001c0002t0042g0067 a0001c0014t0016g0048 a0001c0016t0007g0089 a0001c0019t0007g0056	5	98	0.0510	0	c.54 others(5): Show c.5437T>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	5437		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236129815	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0029 a0002c0004t0029	a0002c0004t0029g0083 a0002c0004t0029g0083	1	98	0.0102	0	c.56 others(5): Show c.5693C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	5693		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236129998	G G	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0043 a0001c0002t0043	a0001c0002t0043g0064 a0001c0002t0043g0064	1	98	0.0102	0	c.58 others(5): Show c.5876G>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	5876		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236130116	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0039 a0001c0002t0039	a0001c0002t0039g0059 a0001c0002t0039g0059	1	98	0.0102	0	c.59 others(5): Show c.5994T>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	5994		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236130338	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0035 a0001c0006t0035	a0001c0006t0035g0044 a0001c0006t0035g0044	1	98	0.0102	0	c.62 others(5): Show c.6216C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	6216		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236130420	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp1 HG01496.hp2 HG02080.hp2 others(29): Show HG00438.hp1 HG01496.hp2 HG02080.hp2 HG02083.hp1 HG02572.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp2 HG02896.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03453.hp1 HG03453.hp2 HG03516.hp1 HG03516.hp2 HG03831.hp1 HG03831.hp2 HG04199.hp2 NA18522.hp2 NA19030.hp1 NA19030.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0011 a0001c0014 a0001c0016 a0001c0017 a0001c0018 a0001c0019 a0002c0007	a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 others(21): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0019 a0001c0001t0027 a0001c0001t0044 a0001c0002t0004 a0001c0002t0013 a0001c0002t0039 a0001c0002t0042 a0001c0003t0003 a0001c0005t0004 a0001c0005t0013 a0001c0005t0031 a0001c0005t0040 a0001c0011t0036 a0001c0014t0016 a0001c0016t0007 a0001c0017t0008 a0001c0018t0049 a0001c0019t0007 a0002c0007t0005 a0002c0007t0008	a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 others(29): Show a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0005g0012 a0001c0001t0007g0008 a0001c0001t0008g0069 a0001c0001t0019g0065 a0001c0001t0027g0062 a0001c0001t0044g0041 a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0039g0059 a0001c0002t0042g0067 a0001c0003t0003g0001 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0005t0031g0031 a0001c0005t0040g0006 a0001c0011t0036g0009 a0001c0014t0016g0048 a0001c0016t0007g0089 a0001c0017t0008g0092 a0001c0018t0049g0080 a0001c0019t0007g0056 a0002c0007t0005g0026 a0002c0007t0005g0094 a0002c0007t0008g0011	32	98	0.3265	0	c.62 others(5): Show c.6298A>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	6298		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236130493	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0040 a0001c0005t0040	a0001c0005t0040g0006 a0001c0005t0040g0006	1	98	0.0102	0	c.63 others(5): Show c.6371A>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	6371		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236130793	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02622.hp2 HG02630.hp2 HG02809.hp1 others(1): Show HG02622.hp2 HG02630.hp2 HG02809.hp1 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0011 others(1): Show a0001c0002 a0001c0005 a0001c0011 a0001c0018	a0001c0002t0043 a0001c0005t0031 a0001c0011t0036 others(1): Show a0001c0002t0043 a0001c0005t0031 a0001c0011t0036 a0001c0018t0049	a0001c0002t0043g0064 a0001c0005t0031g0031 a0001c0011t0036g0009 others(1): Show a0001c0002t0043g0064 a0001c0005t0031g0031 a0001c0011t0036g0009 a0001c0018t0049g0080	4	98	0.0408	0	c.66 others(5): Show c.6671T>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	6671		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236130905	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp1 HG01496.hp2 HG01884.hp2 others(44): Show HG00438.hp1 HG01496.hp2 HG01884.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02280.hp1 HG02572.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02896.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03831.hp1 HG03831.hp2 HG04199.hp2 NA18522.hp2 NA18906.hp1 NA19030.hp1 NA19030.hp2 NA19240.hp2 NA20300.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(11): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0009 a0001c0011 a0001c0012 a0001c0014 a0001c0016 a0001c0017 a0001c0018 a0001c0019 a0002c0007 a0002c0013	a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 others(34): Show a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0019 a0001c0001t0027 a0001c0001t0044 a0001c0001t0048 a0001c0002t0004 a0001c0002t0013 a0001c0002t0038 a0001c0002t0039 a0001c0002t0042 a0001c0002t0043 a0001c0003t0003 a0001c0003t0009 a0001c0003t0012 a0001c0005t0004 a0001c0005t0013 a0001c0005t0031 a0001c0005t0040 a0001c0009t0015 a0001c0009t0017 a0001c0011t0036 a0001c0012t0009 a0001c0014t0016 a0001c0016t0007 a0001c0017t0008 a0001c0018t0049 a0001c0019t0007 a0002c0007t0005 a0002c0007t0008 a0002c0013t0041	a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 others(44): Show a0001c0001t0003g0034 a0001c0001t0003g0036 a0001c0001t0003g0063 a0001c0001t0003g0090 a0001c0001t0005g0007 a0001c0001t0005g0012 a0001c0001t0007g0008 a0001c0001t0008g0069 a0001c0001t0009g0074 a0001c0001t0010g0003 a0001c0001t0010g0014 a0001c0001t0011g0020 a0001c0001t0011g0098 a0001c0001t0012g0071 a0001c0001t0019g0065 a0001c0001t0027g0062 a0001c0001t0044g0041 a0001c0001t0048g0054 a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0038g0086 a0001c0002t0039g0059 a0001c0002t0042g0067 a0001c0002t0043g0064 a0001c0003t0003g0001 a0001c0003t0009g0096 a0001c0003t0012g0066 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0005t0031g0031 a0001c0005t0040g0006 a0001c0009t0015g0038 a0001c0009t0017g0037 a0001c0011t0036g0009 a0001c0012t0009g0078 a0001c0014t0016g0048 a0001c0016t0007g0089 a0001c0017t0008g0092 a0001c0018t0049g0080 a0001c0019t0007g0056 a0002c0007t0005g0026 a0002c0007t0005g0094 a0002c0007t0008g0011 a0002c0013t0041g0081	47	98	0.4796	0	c.67 others(5): Show c.6783T>C	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	6783		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236131268	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01496.hp2 HG02572.hp1 HG02622.hp1 others(9): Show HG01496.hp2 HG02572.hp1 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02818.hp2 HG02896.hp2 HG03098.hp1 HG03453.hp1 NA18522.hp2 NA19030.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0005 a0002c0013 a0001c0002 a0001c0005 a0002c0013	a0001c0002t0004 a0001c0002t0013 a0001c0002t0038 others(6): Show a0001c0002t0004 a0001c0002t0013 a0001c0002t0038 a0001c0002t0039 a0001c0002t0043 a0001c0005t0004 a0001c0005t0013 a0001c0005t0040 a0002c0013t0041	a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 others(9): Show a0001c0002t0004g0072 a0001c0002t0004g0079 a0001c0002t0013g0035 a0001c0002t0038g0086 a0001c0002t0039g0059 a0001c0002t0043g0064 a0001c0005t0004g0058 a0001c0005t0004g0088 a0001c0005t0004g0097 a0001c0005t0013g0050 a0001c0005t0040g0006 a0002c0013t0041g0081	12	98	0.1225	0	c.71 others(5): Show c.7146C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	7146		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236131509	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0034 a0001c0002t0034	a0001c0002t0034g0084 a0001c0002t0034g0084	1	98	0.0102	0	c.73 others(5): Show c.7387A>G	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	7387		chr2	TogoVar
AGAP1_chr2_235489043_236136793	236131646	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0025 a0001c0003t0025	a0001c0003t0025g0015 a0001c0003t0025g0015	1	98	0.0102	0	c.75 others(5): Show c.7524C>T	AGAP1	ENSG00000157985.20	transcript	ENST00000304032.13	protein_coding	18/18	7524		chr2	TogoVar
AGAP2_chr12_57720197_57743742	57725296	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0107 a0001c0002t0009g0107	1	382	0.0026	0	c.12 others(5): Show c.1256G>A	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	1256		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57725337	G G	GA GA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(289): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp2 HG02280.hp2 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18955.hp2 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18999.hp1 NA18999.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19007.hp1 NA19009.hp1 NA19009.hp2 NA19012.hp2 NA19030.hp1 NA19054.hp1 NA19054.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp1 NA19077.hp1 NA19077.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(10): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008 a0009 a0010 a0011 a0012 a0013 a0014	a0001c0001 a0001c0002 a0001c0008 others(20): Show a0001c0001 a0001c0002 a0001c0008 a0001c0014 a0001c0019 a0001c0020 a0001c0021 a0001c0022 a0001c0024 a0002c0005 a0002c0007 a0003c0003 a0004c0004 a0004c0027 a0005c0006 a0006c0011 a0008c0023 a0009c0018 a0010c0016 a0011c0015 a0012c0026 a0013c0013 a0014c0012	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 others(24): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0001t0012 a0001c0002t0001 a0001c0002t0009 a0001c0008t0001 a0001c0014t0001 a0001c0019t0001 a0001c0020t0001 a0001c0021t0001 a0001c0022t0001 a0001c0024t0001 a0002c0005t0001 a0002c0007t0001 a0003c0003t0001 a0004c0004t0001 a0004c0027t0001 a0005c0006t0001 a0006c0011t0001 a0008c0023t0001 a0009c0018t0001 a0010c0016t0008 a0011c0015t0014 a0012c0026t0001 a0013c0013t0001 a0014c0012t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(103): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0018 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0127 a0001c0001t0001g0133 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0004g0020 a0001c0001t0004g0072 a0001c0001t0004g0092 a0001c0001t0004g0096 a0001c0001t0004g0097 a0001c0001t0004g0110 a0001c0001t0011g0076 a0001c0001t0012g0063 a0001c0002t0001g0002 a0001c0002t0001g0019 a0001c0002t0001g0041 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0064 a0001c0002t0001g0104 a0001c0002t0001g0106 a0001c0002t0001g0108 a0001c0002t0001g0109 a0001c0002t0001g0115 a0001c0002t0001g0117 a0001c0002t0001g0125 a0001c0002t0009g0107 a0001c0008t0001g0049 a0001c0008t0001g0111 a0001c0014t0001g0062 a0001c0019t0001g0132 a0001c0020t0001g0071 a0001c0021t0001g0128 a0001c0022t0001g0084 a0001c0024t0001g0103 a0002c0005t0001g0027 a0002c0005t0001g0057 a0002c0005t0001g0058 a0002c0007t0001g0028 a0002c0007t0001g0059 a0003c0003t0001g0093 a0004c0004t0001g0008 a0004c0027t0001g0146 a0005c0006t0001g0017 a0006c0011t0001g0038 a0008c0023t0001g0099 a0009c0018t0001g0131 a0010c0016t0008g0054 a0011c0015t0014g0147 a0012c0026t0001g0145 a0013c0013t0001g0056 a0014c0012t0001g0055	292	382	0.7644	1	c.12 others(6): Show c.1214dupT	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	1214		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57725337	G G	GAA GAA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00438.hp1 others(47): Show HG00280.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp2 HG01109.hp2 HG01167.hp1 HG01175.hp2 HG01192.hp2 HG01258.hp1 HG01891.hp1 HG01952.hp1 HG01975.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02040.hp2 HG02056.hp1 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02723.hp1 HG02895.hp2 HG02897.hp1 HG03195.hp2 HG03710.hp1 HG04228.hp1 NA18747.hp1 NA18747.hp2 NA18943.hp1 NA18947.hp1 NA18948.hp2 NA18961.hp2 NA18965.hp1 NA18969.hp2 NA18970.hp1 NA18992.hp2 NA19007.hp2 NA19012.hp1 NA19058.hp2 NA19072.hp2 NA19074.hp2 NA19091.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0025 a0002c0005 a0001c0001 a0001c0025 a0002c0005	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(3): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0025t0002 a0002c0005t0002 a0002c0005t0013	a0001c0001t0002g0003 a0001c0001t0002g0014 a0001c0001t0002g0067 others(13): Show a0001c0001t0002g0003 a0001c0001t0002g0014 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0124 a0001c0001t0006g0032 a0001c0001t0006g0042 a0001c0001t0006g0075 a0001c0001t0006g0083 a0001c0001t0007g0137 a0001c0001t0007g0138 a0001c0025t0002g0123 a0002c0005t0002g0060 a0002c0005t0013g0061	50	382	0.1309	2	c.12 others(13): Show c.1213_*1214dupTT	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	1214		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57725337	GA GA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01109.hp1 HG01884.hp2 HG02809.hp2 others(4): Show HG01109.hp1 HG01884.hp2 HG02809.hp2 HG03041.hp1 HG03225.hp1 NA19030.hp2 NA19240.hp1	a0002 a0003 a0002 a0003	a0002c0009 a0003c0003 a0002c0009 a0003c0003	a0002c0009t0005 a0003c0003t0005 a0002c0009t0005 a0003c0003t0005	a0002c0009t0005g0029 a0003c0003t0005g0024 a0003c0003t0005g0030 a0002c0009t0005g0029 a0003c0003t0005g0024 a0003c0003t0005g0030	7	382	0.0183	-1	c.12 others(6): Show c.1214delT	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	1214		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57725514	AGAGGTCA others(3): Show AGAGGTCACGG	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0013 a0002c0005t0013	a0002c0005t0013g0061 a0002c0005t0013g0061	1	382	0.0026	-10	c.10 others(21): Show c.1028_*1037delCCGTGACCTC	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	1028		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57725681	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02723.hp1 HG03195.hp2 HG02723.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0137 a0001c0001t0007g0138 a0001c0001t0007g0137 a0001c0001t0007g0138	2	382	0.0052	0	c.87 others(4): Show c.871C>T	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	871		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57725825	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02145.hp2 HG02622.hp1 HG02647.hp1 others(7): Show HG02145.hp2 HG02622.hp1 HG02647.hp1 HG02896.hp2 HG02965.hp1 HG03041.hp2 HG03209.hp2 HG03471.hp1 NA20129.hp2 NA21309.hp1	a0001 a0011 a0001 a0011	a0001c0001 a0011c0015 a0001c0001 a0011c0015	a0001c0001t0004 a0001c0001t0010 a0011c0015t0014 a0001c0001t0004 a0001c0001t0010 a0011c0015t0014	a0001c0001t0004g0020 a0001c0001t0004g0072 a0001c0001t0004g0092 others(5): Show a0001c0001t0004g0020 a0001c0001t0004g0072 a0001c0001t0004g0092 a0001c0001t0004g0096 a0001c0001t0004g0097 a0001c0001t0004g0110 a0001c0001t0010g0095 a0011c0015t0014g0147	10	382	0.0262	0	c.72 others(4): Show c.727C>T	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	727		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57725879	C C	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03669.hp1 HG03669.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0076 a0001c0001t0011g0076	1	382	0.0026	0	c.67 others(4): Show c.673G>T	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	673		chr12	TogoVar
AGAP2_chr12_57720197_57743742	57726493	C C	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG00438.hp2 others(40): Show HG00280.hp1 HG00323.hp2 HG00438.hp2 HG00597.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp2 HG01109.hp2 HG01167.hp1 HG01175.hp2 HG01192.hp2 HG01258.hp1 HG01891.hp1 HG01952.hp1 HG01975.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02040.hp2 HG02056.hp1 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG03710.hp1 HG04228.hp1 NA18747.hp1 NA18747.hp2 NA18942.hp2 NA18943.hp1 NA18947.hp1 NA18948.hp2 NA18961.hp2 NA18965.hp1 NA18969.hp2 NA19007.hp2 NA19012.hp1 NA19072.hp2 NA19074.hp2 NA19091.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0025 a0002c0005 a0001c0001 a0001c0025 a0002c0005	a0001c0001t0002 a0001c0001t0012 a0001c0025t0002 others(2): Show a0001c0001t0002 a0001c0001t0012 a0001c0025t0002 a0002c0005t0002 a0002c0005t0013	a0001c0001t0002g0003 a0001c0001t0002g0014 a0001c0001t0002g0067 others(8): Show a0001c0001t0002g0003 a0001c0001t0002g0014 a0001c0001t0002g0067 a0001c0001t0002g0118 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0124 a0001c0001t0012g0063 a0001c0025t0002g0123 a0002c0005t0002g0060 a0002c0005t0013g0061	43	382	0.1126	0	c.59 others(3): Show c.59G>T	AGAP2	ENSG00000135439.12	transcript	ENST00000547588.6	protein_coding	19/19	59		chr12	TogoVar
AGAP3_chr7_151081475_151149434	151144095	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18967.hp2 NA19065.hp1 NA19081.hp1 NA18967.hp2 NA19065.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0152 a0001c0001t0007g0156 a0001c0001t0007g0172 a0001c0001t0007g0152 a0001c0001t0007g0156 a0001c0001t0007g0172	3	354	0.0085	0	c.15 others(4): Show c.152C>T	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	18/18	152		chr7	TogoVar
AGAP3_chr7_151081475_151149434	151144231	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02145.hp1 HG02258.hp2 HG02486.hp2 others(9): Show HG02145.hp1 HG02258.hp2 HG02486.hp2 HG02572.hp2 HG02630.hp2 HG02965.hp2 HG02976.hp1 HG03041.hp1 HG03139.hp1 HG03195.hp2 HG03453.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0104 a0001c0001t0003g0106 a0001c0001t0003g0186 others(9): Show a0001c0001t0003g0104 a0001c0001t0003g0106 a0001c0001t0003g0186 a0001c0001t0003g0190 a0001c0001t0003g0208 a0001c0001t0003g0209 a0001c0001t0003g0232 a0001c0001t0003g0248 a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0276 a0001c0001t0003g0281	12	354	0.0339	0	c.28 others(4): Show c.288A>G	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	18/18	288		chr7	TogoVar
AGAP3_chr7_151081475_151149434	151144291	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18941.hp1 NA18942.hp2 NA18961.hp2 others(9): Show NA18941.hp1 NA18942.hp2 NA18961.hp2 NA18967.hp2 NA18974.hp2 NA18979.hp1 NA18983.hp2 NA18986.hp1 NA19065.hp1 NA19081.hp1 NA19087.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008	a0001c0001t0005g0005 a0001c0001t0005g0126 a0001c0001t0005g0141 others(9): Show a0001c0001t0005g0005 a0001c0001t0005g0126 a0001c0001t0005g0141 a0001c0001t0005g0142 a0001c0001t0005g0153 a0001c0001t0005g0169 a0001c0001t0005g0170 a0001c0001t0005g0171 a0001c0001t0007g0152 a0001c0001t0007g0156 a0001c0001t0007g0172 a0001c0001t0008g0022	12	354	0.0339	0	c.34 others(4): Show c.348G>A	AGAP3	ENSG00000133612.20	transcript	ENST00000397238.7	protein_coding	18/18	348		chr7	TogoVar
AGAP4_chr10_45820594_45852500	45825610	T T	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0036 a0036	a0036c0031 a0036c0031	a0036c0031t0005 a0036c0031t0005	a0036c0031t0005g0090 a0036c0031t0005g0090	1	382	0.0026	0	c.30 others(4): Show c.305A>T	AGAP4	ENSG00000188234.15	transcript	ENST00000616763.6	protein_coding	8/8	305		chr10	TogoVar
AGAP4_chr10_45820594_45852500	45825624	A A	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0036 a0036	a0036c0031 a0036c0031	a0036c0031t0005 a0036c0031t0005	a0036c0031t0005g0090 a0036c0031t0005g0090	1	382	0.0026	0	c.29 others(4): Show c.291T>A	AGAP4	ENSG00000188234.15	transcript	ENST00000616763.6	protein_coding	8/8	291		chr10	TogoVar
AGAP4_chr10_45820594_45852500	45825647	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0036 a0036	a0036c0031 a0036c0031	a0036c0031t0005 a0036c0031t0005	a0036c0031t0005g0090 a0036c0031t0005g0090	1	382	0.0026	0	c.26 others(4): Show c.268A>G	AGAP4	ENSG00000188234.15	transcript	ENST00000616763.6	protein_coding	8/8	268		chr10	TogoVar
AGAP4_chr10_45820594_45852500	45825717	A A	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0036 a0036	a0036c0031 a0036c0031	a0036c0031t0005 a0036c0031t0005	a0036c0031t0005g0090 a0036c0031t0005g0090	1	382	0.0026	0	c.19 others(4): Show c.198T>G	AGAP4	ENSG00000188234.15	transcript	ENST00000616763.6	protein_coding	8/8	198		chr10	TogoVar
AGAP4_chr10_45820594_45852500	45825726	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0036 a0036	a0036c0031 a0036c0031	a0036c0031t0005 a0036c0031t0005	a0036c0031t0005g0090 a0036c0031t0005g0090	1	382	0.0026	0	c.18 others(4): Show c.189A>G	AGAP4	ENSG00000188234.15	transcript	ENST00000616763.6	protein_coding	8/8	189		chr10	TogoVar
AGAP4_chr10_45820594_45852500	45825746	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0036 a0036	a0036c0031 a0036c0031	a0036c0031t0005 a0036c0031t0005	a0036c0031t0005g0090 a0036c0031t0005g0090	1	382	0.0026	0	c.16 others(4): Show c.169G>A	AGAP4	ENSG00000188234.15	transcript	ENST00000616763.6	protein_coding	8/8	169		chr10	TogoVar

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