Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
ABRAXAS1_chr4_83454517_83490100	83485783	T T	TACAC TACAC	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01993.hp2 HG02300.hp2 HG02451.hp1 others(5): Show HG01993.hp2 HG02300.hp2 HG02451.hp1 HG02622.hp2 NA18946.hp2 NA18947.hp2 NA18971.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0020 a0002c0002t0001 a0001c0001t0002 a0001c0001t0020 a0002c0002t0001	a0001c0001t0002g0001 a0001c0001t0002g0012 a0001c0001t0002g0090 others(5): Show a0001c0001t0002g0001 a0001c0001t0002g0012 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0020g0140 a0002c0002t0001g0002 a0002c0002t0001g0158 a0002c0002t0001g0168	8	356	0.0225	4	c.-71 others(13): Show c.-715_-712dupGTGT	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	684	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83485783	TAC TAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02004.hp2 HG02258.hp1 HG03540.hp1 HG02004.hp2 HG02258.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0098 a0001c0001t0005g0192 a0001c0001t0005g0193 a0001c0001t0002g0098 a0001c0001t0005g0192 a0001c0001t0005g0193	3	356	0.0084	-2	c.-71 others(11): Show c.-713_-712delGT	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	684	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83485816	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-74 others(4): Show c.-744C>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	716	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83485946	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp2 HG01515.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0002 a0003c0004t0002	a0003c0004t0002g0124 a0003c0004t0002g0124	1	356	0.0028	0	c.-87 others(4): Show c.-874C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	846	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486073	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp1 HG02055.hp1 HG02258.hp1 others(9): Show HG01167.hp1 HG02055.hp1 HG02258.hp1 HG02717.hp1 HG02809.hp1 HG03098.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03540.hp1 NA19043.hp2 NA19240.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0001c0001 a0006c0007	a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 others(2): Show a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0001t0014 a0006c0007t0026	a0001c0001t0005g0192 a0001c0001t0005g0193 a0001c0001t0007g0007 others(5): Show a0001c0001t0005g0192 a0001c0001t0005g0193 a0001c0001t0007g0007 a0001c0001t0007g0194 a0001c0001t0007g0195 a0001c0001t0009g0209 a0001c0001t0014g0034 a0006c0007t0026g0139	12	356	0.0337	0	c.-10 others(5): Show c.-1001T>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	973	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486116	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0209 a0001c0001t0009g0209	1	356	0.0028	0	c.-10 others(5): Show c.-1044C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1016	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486149	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0190 a0001c0001t0005g0190	1	356	0.0028	0	c.-10 others(5): Show c.-1077T>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1049	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486187	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03041.hp2 HG03098.hp2 HG03453.hp2 others(1): Show HG03041.hp2 HG03098.hp2 HG03453.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0003 a0001c0005t0009 a0001c0001t0003 a0001c0005t0009	a0001c0001t0003g0005 a0001c0005t0009g0049 a0001c0005t0009g0208 a0001c0001t0003g0005 a0001c0005t0009g0049 a0001c0005t0009g0208	4	356	0.0112	0	c.-11 others(5): Show c.-1115G>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1087	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486245	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19062.hp1 NA19062.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0178 a0002c0002t0001g0178	1	356	0.0028	0	c.-11 others(5): Show c.-1173G>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1145	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486262	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18942.hp1 NA18983.hp2 NA18942.hp1 NA18983.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0176 a0002c0002t0001g0203 a0002c0002t0001g0176 a0002c0002t0001g0203	2	356	0.0056	0	c.-11 others(5): Show c.-1190A>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1162	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486363	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03041.hp2 HG03098.hp2 HG03453.hp2 others(1): Show HG03041.hp2 HG03098.hp2 HG03453.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0003 a0001c0005t0009 a0001c0001t0003 a0001c0005t0009	a0001c0001t0003g0005 a0001c0005t0009g0049 a0001c0005t0009g0208 a0001c0001t0003g0005 a0001c0005t0009g0049 a0001c0005t0009g0208	4	356	0.0112	0	c.-12 others(5): Show c.-1291A>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1263	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486624	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18985.hp1 NA18989.hp1 NA19058.hp2 others(2): Show NA18985.hp1 NA18989.hp1 NA19058.hp2 NA19072.hp1 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0011 a0001c0001t0002g0100 a0001c0001t0002g0011 a0001c0001t0002g0100	5	356	0.0140	0	c.-15 others(5): Show c.-1552G>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1524	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486796	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0189 a0001c0001t0006g0189	1	356	0.0028	0	c.-17 others(5): Show c.-1724C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1696	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486860	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-17 others(5): Show c.-1788T>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1760	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83486888	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-18 others(5): Show c.-1816T>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1788	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487008	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-19 others(5): Show c.-1936C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1908	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487024	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(170): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01258.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02257.hp1 HG02258.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18947.hp1 NA18948.hp1 NA18952.hp2 NA18956.hp1 NA18959.hp1 NA18961.hp1 NA18961.hp2 NA18965.hp1 NA18968.hp1 NA18969.hp1 NA18975.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp2 NA18995.hp1 NA19001.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19058.hp2 NA19064.hp2 NA19072.hp1 NA19072.hp2 NA19075.hp2 NA19078.hp2 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19240.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0005 a0002c0002 others(2): Show a0001c0001 a0001c0005 a0002c0002 a0003c0004 a0006c0007	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(15): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0005t0009 a0002c0002t0011 a0003c0004t0002 a0006c0007t0026	a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0011 others(94): Show a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0086 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0135 a0001c0001t0002g0211 a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0005g0013 a0001c0001t0005g0044 a0001c0001t0005g0045 a0001c0001t0005g0190 a0001c0001t0005g0192 a0001c0001t0005g0193 a0001c0001t0006g0024 a0001c0001t0006g0025 a0001c0001t0006g0189 a0001c0001t0006g0204 a0001c0001t0006g0205 a0001c0001t0006g0206 a0001c0001t0006g0207 a0001c0001t0007g0007 a0001c0001t0007g0194 a0001c0001t0007g0195 a0001c0001t0009g0209 a0001c0001t0013g0115 a0001c0001t0013g0134 a0001c0001t0014g0034 a0001c0001t0020g0140 a0001c0001t0021g0079 a0001c0001t0022g0113 a0001c0001t0023g0114 a0001c0001t0025g0141 a0001c0005t0009g0049 a0001c0005t0009g0208 a0002c0002t0011g0087 a0003c0004t0002g0033 a0003c0004t0002g0124 a0003c0004t0002g0136 a0003c0004t0002g0137 a0006c0007t0026g0139	173	356	0.4860	0	c.-19 others(5): Show c.-1952G>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	1924	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487144	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp2 NA18906.hp1 HG03130.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0005	2	356	0.0056	0	c.-20 others(5): Show c.-2072G>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2044	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487151	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0162 a0002c0002t0001g0162	1	356	0.0028	0	c.-20 others(5): Show c.-2079G>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2051	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487212	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19058.hp1 NA19058.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0018 a0002c0002t0018	a0002c0002t0018g0145 a0002c0002t0018g0145	1	356	0.0028	0	c.-21 others(5): Show c.-2140C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2112	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487434	C C	CT CT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(14): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1 NA19002.hp2 NA19078.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 others(1): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0002c0002t0001	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(8): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079 a0002c0002t0001g0002 a0002c0002t0001g0073	17	356	0.0478	1	c.-23 others(6): Show c.-2363dupA	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2335	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487479	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03041.hp2 HG03098.hp2 HG03453.hp2 others(1): Show HG03041.hp2 HG03098.hp2 HG03453.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0003 a0001c0005t0009 a0001c0001t0003 a0001c0005t0009	a0001c0001t0003g0005 a0001c0005t0009g0049 a0001c0005t0009g0208 a0001c0001t0003g0005 a0001c0005t0009g0049 a0001c0005t0009g0208	4	356	0.0112	0	c.-24 others(5): Show c.-2407G>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2379	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487569	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(10): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0021 a0001c0001t0004 a0001c0001t0021	a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 others(5): Show a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	13	356	0.0365	0	c.-24 others(5): Show c.-2497T>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2469	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487570	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp2 NA18906.hp1 HG03130.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0005	2	356	0.0056	0	c.-24 others(5): Show c.-2498A>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2470	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487579	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp2 NA18906.hp1 HG03130.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0005	2	356	0.0056	0	c.-25 others(5): Show c.-2507A>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2479	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487654	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-25 others(5): Show c.-2582C>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2554	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487727	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02886.hp1 HG02572.hp2 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0028 a0001c0001t0002g0029	2	356	0.0056	0	c.-26 others(5): Show c.-2655G>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2627	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487783	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00642.hp1 others(16): Show HG00140.hp1 HG00280.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00741.hp2 HG01255.hp1 HG02486.hp2 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03471.hp1 HG03516.hp2 HG03669.hp1 HG03688.hp1 HG03710.hp1 HG06807.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0006 a0001c0001t0005 a0001c0001t0006	a0001c0001t0005g0013 a0001c0001t0005g0044 a0001c0001t0005g0045 others(7): Show a0001c0001t0005g0013 a0001c0001t0005g0044 a0001c0001t0005g0045 a0001c0001t0005g0190 a0001c0001t0006g0024 a0001c0001t0006g0025 a0001c0001t0006g0204 a0001c0001t0006g0205 a0001c0001t0006g0206 a0001c0001t0006g0207	19	356	0.0534	0	c.-27 others(5): Show c.-2711T>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2683	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487821	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(10): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0021 a0001c0001t0004 a0001c0001t0021	a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 others(5): Show a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	13	356	0.0365	0	c.-27 others(5): Show c.-2749T>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2721	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83487944	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0210 a0002c0002t0001g0210	1	356	0.0028	0	c.-28 others(5): Show c.-2872C>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	2844	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83488177	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0135 a0001c0001t0002g0135	1	356	0.0028	0	c.-31 others(5): Show c.-3105G>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3077	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83488178	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-31 others(5): Show c.-3106C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3078	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83488334	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp1 HG02965.hp1 HG02970.hp2 HG02615.hp1 HG02965.hp1 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0198 a0001c0001t0003g0005 a0001c0001t0003g0198	3	356	0.0084	0	c.-32 others(5): Show c.-3262A>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3234	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83488637	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-35 others(5): Show c.-3565T>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3537	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83488937	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02886.hp1 HG02572.hp2 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0028 a0001c0001t0002g0029	2	356	0.0056	0	c.-38 others(5): Show c.-3865C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3837	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83488969	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0019 a0002c0002t0019	a0002c0002t0019g0164 a0002c0002t0019g0164	1	356	0.0028	0	c.-38 others(5): Show c.-3897C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3869	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489072	C C	CA CA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(47): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00438.hp1 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00741.hp2 HG01243.hp2 HG01255.hp1 HG02071.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp1 HG02615.hp2 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02818.hp1 HG02895.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03130.hp2 HG03471.hp1 HG03486.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03710.hp1 HG03710.hp2 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18995.hp2 NA19082.hp2 NA19240.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0003 a0001c0001 a0002c0002 a0002c0003	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0014 a0002c0002t0001 a0002c0002t0010 a0002c0003t0001	a0001c0001t0002g0020 a0001c0001t0002g0099 a0001c0001t0002g0135 others(29): Show a0001c0001t0002g0020 a0001c0001t0002g0099 a0001c0001t0002g0135 a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0005g0013 a0001c0001t0005g0044 a0001c0001t0005g0045 a0001c0001t0005g0190 a0001c0001t0006g0024 a0001c0001t0006g0025 a0001c0001t0006g0204 a0001c0001t0006g0205 a0001c0001t0006g0206 a0001c0001t0006g0207 a0001c0001t0014g0034 a0002c0002t0001g0009 a0002c0002t0001g0021 a0002c0002t0001g0023 a0002c0002t0001g0027 a0002c0002t0001g0038 a0002c0002t0001g0078 a0002c0002t0001g0148 a0002c0002t0001g0161 a0002c0002t0001g0187 a0002c0002t0010g0026 a0002c0003t0001g0051	50	356	0.1405	1	c.-40 others(6): Show c.-4001dupT	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3973	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489072	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp1 HG01168.hp2 HG02258.hp1 others(6): Show HG01081.hp1 HG01168.hp2 HG02258.hp1 HG02451.hp1 HG02572.hp2 HG02886.hp1 HG03540.hp1 NA18962.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0003 a0001c0001 a0002c0002 a0002c0003	a0001c0001t0002 a0001c0001t0005 a0001c0001t0020 others(3): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0020 a0001c0001t0025 a0002c0002t0001 a0002c0003t0001	a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0005g0192 others(6): Show a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0005g0192 a0001c0001t0005g0193 a0001c0001t0020g0140 a0001c0001t0025g0141 a0002c0002t0001g0023 a0002c0002t0001g0175 a0002c0003t0001g0052	9	356	0.0253	-1	c.-40 others(6): Show c.-4001delT	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	3973	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489114	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG02572.hp2 HG02886.hp1 others(1): Show HG02451.hp1 HG02572.hp2 HG02886.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0020 a0001c0001t0025 a0001c0001t0002 a0001c0001t0020 a0001c0001t0025	a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0020g0140 others(1): Show a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0020g0140 a0001c0001t0025g0141	4	356	0.0112	0	c.-40 others(5): Show c.-4042G>A	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4014	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489137	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19003.hp1 NA19078.hp1 NA19080.hp1 NA19003.hp1 NA19078.hp1 NA19080.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0002	3	356	0.0084	0	c.-40 others(5): Show c.-4065T>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4037	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489141	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(12): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0021 a0001c0001t0003 a0001c0001t0004 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(6): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0021g0079	15	356	0.0421	0	c.-40 others(5): Show c.-4069C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4041	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489166	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(196): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01081.hp2 HG01099.hp2 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01257.hp2 HG01258.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18947.hp1 NA18948.hp1 NA18952.hp2 NA18956.hp1 NA18959.hp1 NA18961.hp1 NA18961.hp2 NA18965.hp1 NA18968.hp1 NA18969.hp1 NA18975.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18990.hp2 NA18991.hp2 NA18992.hp2 NA18995.hp1 NA19001.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp2 NA19056.hp1 NA19058.hp2 NA19064.hp2 NA19072.hp1 NA19072.hp2 NA19075.hp2 NA19078.hp2 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19088.hp1 NA19089.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0005 a0002c0002 others(2): Show a0001c0001 a0001c0005 a0002c0002 a0003c0004 a0006c0007	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(16): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0013 a0001c0001t0014 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0005t0009 a0002c0002t0001 a0002c0002t0011 a0003c0004t0002 a0006c0007t0026	a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0011 others(106): Show a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0086 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0112 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0135 a0001c0001t0002g0211 a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0196 a0001c0001t0003g0197 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0005g0013 a0001c0001t0005g0044 a0001c0001t0005g0045 a0001c0001t0005g0190 a0001c0001t0005g0192 a0001c0001t0005g0193 a0001c0001t0006g0024 a0001c0001t0006g0025 a0001c0001t0006g0189 a0001c0001t0006g0204 a0001c0001t0006g0205 a0001c0001t0006g0206 a0001c0001t0006g0207 a0001c0001t0007g0007 a0001c0001t0007g0194 a0001c0001t0007g0195 a0001c0001t0009g0209 a0001c0001t0013g0115 a0001c0001t0013g0134 a0001c0001t0014g0034 a0001c0001t0020g0140 a0001c0001t0021g0079 a0001c0001t0022g0113 a0001c0001t0023g0114 a0001c0001t0025g0141 a0001c0005t0009g0049 a0001c0005t0009g0208 a0002c0002t0001g0187 a0002c0002t0011g0087 a0003c0004t0002g0033 a0003c0004t0002g0124 a0003c0004t0002g0136 a0003c0004t0002g0137 a0006c0007t0026g0139	199	356	0.5590	0	c.-40 others(5): Show c.-4094A>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4066	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489435	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0023 a0002c0002t0001g0023	1	356	0.0028	0	c.-43 others(5): Show c.-4363T>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4335	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489701	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0179 a0002c0002t0001g0179	1	356	0.0028	0	c.-46 others(5): Show c.-4629A>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4601	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489783	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp1 HG03209.hp2 NA19043.hp2 HG03098.hp1 HG03209.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0007 a0001c0001t0007g0007	3	356	0.0084	0	c.-47 others(5): Show c.-4711T>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4683	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489869	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00741.hp1 HG01515.hp1 HG01517.hp1 HG00741.hp1 HG01515.hp1 HG01517.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0002 a0002c0002t0001g0167 a0002c0002t0001g0002 a0002c0002t0001g0167	3	356	0.0084	0	c.-47 others(5): Show c.-4797G>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4769	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489876	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19088.hp2 NA19088.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0004 a0002c0002t0001g0004	1	356	0.0028	0	c.-48 others(5): Show c.-4804A>C	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4776	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83489892	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp2 HG02055.hp2 HG02451.hp2 others(13): Show HG01243.hp2 HG02055.hp2 HG02451.hp2 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp1 HG03130.hp2 HG03195.hp2 HG03486.hp1 HG03540.hp2 HG03579.hp2 HG06807.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 others(1): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0021	a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 others(7): Show a0001c0001t0003g0005 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0084 a0001c0001t0009g0209 a0001c0001t0021g0079	16	356	0.0449	0	c.-48 others(5): Show c.-4820T>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4792	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83490003	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG02145.hp2 HG02258.hp2 others(23): Show HG01109.hp2 HG02145.hp2 HG02258.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02723.hp1 HG02723.hp2 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp2 NA19240.hp1 NA20129.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0007 a0002c0002t0001 a0001c0001t0003 a0001c0001t0007 a0002c0002t0001	a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0046 others(11): Show a0001c0001t0003g0005 a0001c0001t0003g0008 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0196 a0001c0001t0003g0197 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0007g0007 a0002c0002t0001g0187	26	356	0.0730	0	c.-49 others(5): Show c.-4931A>G	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4903	chr4	TogoVar
ABRAXAS1_chr4_83454517_83490100	83490006	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19085.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0133 a0001c0001t0002g0133	1	356	0.0028	0	c.-49 others(5): Show c.-4934C>T	ABRAXAS1	ENSG00000163322.14	transcript	ENST00000321945.12	protein_coding	4906	chr4	TogoVar

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