Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CSNK1G3_chr5_123507177_123622049	123512411	CCTCG CCTCG	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02055.hp1 HG02109.hp1 NA19030.hp2 HG02055.hp1 HG02109.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0015 a0001c0001t0011 a0001c0001t0015	a0001c0001t0011g0004 a0001c0001t0015g0038 a0001c0001t0011g0004 a0001c0001t0015g0038	3	294	0.0102	-4	c.-38 others(13): Show c.-387_-384delGCTC	CSNK1G3	ENSG00000151292.19	transcript	ENST00000696905.1	protein_coding	1/14	33230	INFO_REALIGN_3_PRIME	chr5	TogoVar
CSNK1G3_chr5_123507177_123622049	123545483	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0136 a0001c0001t0024g0136	1	294	0.0034	0	c.-18 others(4): Show c.-181A>G	CSNK1G3	ENSG00000151292.19	transcript	ENST00000696905.1	protein_coding	2/14	181		chr5	TogoVar
CSNK2A1_chr20_467498_548790	508628	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0283 a0001c0001t0041g0283	1	316	0.0032	0	c.-77 others(3): Show c.-77C>A	CSNK2A1	ENSG00000101266.19	transcript	ENST00000217244.9	protein_coding	3/14	77		chr20	TogoVar
CSNK2A2_chr16_58152907_58203106	58197773	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp1 HG01081.hp2 HG01981.hp1 others(37): Show HG00099.hp1 HG01081.hp2 HG01981.hp1 HG02055.hp2 HG02071.hp2 HG02083.hp2 HG02135.hp1 HG02486.hp1 HG02602.hp1 HG02683.hp1 HG02922.hp2 HG02965.hp2 HG03491.hp2 HG03654.hp2 HG03688.hp2 HG03704.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 NA18939.hp2 NA18946.hp2 NA18954.hp2 NA18963.hp2 NA18965.hp2 NA18987.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp1 NA19003.hp2 NA19030.hp2 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19065.hp2 NA19066.hp1 NA19072.hp1 NA19079.hp1 NA19080.hp2 NA19087.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0031 a0001c0001t0002g0297 a0001c0001t0002g0298 others(36): Show a0001c0001t0002g0031 a0001c0001t0002g0297 a0001c0001t0002g0298 a0001c0001t0002g0299 a0001c0001t0002g0300 a0001c0001t0002g0301 a0001c0001t0002g0302 a0001c0001t0002g0303 a0001c0001t0002g0304 a0001c0001t0002g0305 a0001c0001t0002g0306 a0001c0001t0002g0307 a0001c0001t0002g0308 a0001c0001t0002g0309 a0001c0001t0002g0310 a0001c0001t0002g0311 a0001c0001t0002g0312 a0001c0001t0002g0313 a0001c0001t0002g0314 a0001c0001t0002g0315 a0001c0001t0002g0316 a0001c0001t0002g0317 a0001c0001t0002g0318 a0001c0001t0002g0319 a0001c0001t0002g0320 a0001c0001t0002g0321 a0001c0001t0002g0322 a0001c0001t0002g0323 a0001c0001t0002g0324 a0001c0001t0002g0325 a0001c0001t0002g0326 a0001c0001t0002g0327 a0001c0001t0002g0328 a0001c0001t0002g0329 a0001c0001t0002g0330 a0001c0001t0002g0331 a0001c0001t0002g0332 a0001c0001t0002g0333 a0001c0001t0002g0334	40	400	0.1000	0	c.-37 others(3): Show c.-37C>T	CSNK2A2	ENSG00000070770.10	transcript	ENST00000262506.8	protein_coding	1/12	37		chr16	TogoVar
CSNK2A2_chr16_58152907_58203106	58198027	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01884.hp2 HG02970.hp2 HG01884.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0335 a0001c0001t0005g0336 a0001c0001t0005g0335 a0001c0001t0005g0336	2	400	0.0050	0	c.-29 others(4): Show c.-291G>T	CSNK2A2	ENSG00000070770.10	transcript	ENST00000262506.8	protein_coding	1/12	291		chr16	TogoVar
CSNK2B_chr6_31661080_31675067	31666181	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02071.hp1 HG02683.hp2 HG02698.hp2 others(1): Show HG02071.hp1 HG02683.hp2 HG02698.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0008 a0001c0001t0004g0008	4	421	0.0095	0	c.-39 others(3): Show c.-39C>T	CSNK2B	ENSG00000204435.15	transcript	ENST00000375882.7	protein_coding	1/7	651		chr6	TogoVar
CSNK2B_chr6_31661080_31675067	31666831	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0003 a0001c0001t0005g0003	1	421	0.0024	0	c.-1G others(2): Show c.-1G>C	CSNK2B	ENSG00000204435.15	transcript	ENST00000375882.7	protein_coding	2/7	1		chr6	TogoVar
CSNKA2IP_chr3_88333456_88472594	88338473	T T	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00438.hp2 others(133): Show HG00280.hp1 HG00408.hp1 HG00438.hp2 HG00558.hp1 HG00597.hp1 HG00609.hp2 HG00639.hp1 HG00642.hp2 HG00741.hp2 HG01070.hp2 HG01074.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01361.hp1 HG01433.hp2 HG01515.hp2 HG01516.hp1 HG01952.hp2 HG01975.hp1 HG01993.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp2 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp2 HG02155.hp2 HG02258.hp2 HG02280.hp1 HG02300.hp1 HG02451.hp1 HG02486.hp2 HG02602.hp1 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03195.hp1 HG03209.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03579.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp2 NA18953.hp2 NA18959.hp2 NA18962.hp1 NA18965.hp2 NA18966.hp2 NA18968.hp1 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp2 NA18986.hp2 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp2 NA18991.hp2 NA18993.hp1 NA19000.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19012.hp2 NA19030.hp2 NA19054.hp1 NA19056.hp2 NA19058.hp2 NA19060.hp2 NA19063.hp2 NA19068.hp1 NA19074.hp2 NA19075.hp1 NA19077.hp2 NA19078.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp2 NA19082.hp1 NA19084.hp2 NA19090.hp1 NA19091.hp2 NA20752.hp1 NA20752.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0011 a0020 a0021	a0001c0001 a0001c0004 a0002c0002 others(11): Show a0001c0001 a0001c0004 a0002c0002 a0002c0006 a0002c0024 a0003c0003 a0004c0005 a0005c0007 a0006c0008 a0007c0010 a0008c0009 a0011c0013 a0020c0018 a0021c0021	a0001c0001t0002 a0001c0004t0002 a0002c0002t0002 others(12): Show a0001c0001t0002 a0001c0004t0002 a0002c0002t0002 a0002c0002t0003 a0002c0006t0002 a0002c0024t0002 a0003c0003t0002 a0004c0005t0002 a0005c0007t0002 a0006c0008t0002 a0007c0010t0002 a0008c0009t0002 a0011c0013t0002 a0020c0018t0002 a0021c0021t0002	a0001c0001t0002g0001 a0001c0001t0002g0251 a0001c0001t0002g0252 others(131): Show a0001c0001t0002g0001 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0276 a0001c0001t0002g0277 a0001c0001t0002g0278 a0001c0001t0002g0284 a0001c0001t0002g0285 a0001c0001t0002g0286 a0001c0001t0002g0287 a0001c0001t0002g0289 a0001c0001t0002g0290 a0001c0001t0002g0291 a0001c0001t0002g0293 a0001c0001t0002g0294 a0001c0001t0002g0295 a0001c0001t0002g0298 a0001c0001t0002g0299 a0001c0001t0002g0301 a0001c0001t0002g0302 a0001c0001t0002g0303 a0001c0001t0002g0304 a0001c0001t0002g0305 a0001c0001t0002g0307 a0001c0001t0002g0308 a0001c0001t0002g0309 a0001c0001t0002g0310 a0001c0001t0002g0311 a0001c0001t0002g0312 a0001c0001t0002g0316 a0001c0001t0002g0318 a0001c0001t0002g0319 a0001c0001t0002g0321 a0001c0001t0002g0323 a0001c0001t0002g0328 a0001c0001t0002g0330 a0001c0001t0002g0331 a0001c0001t0002g0333 a0001c0001t0002g0336 a0001c0001t0002g0338 a0001c0001t0002g0339 a0001c0001t0002g0340 a0001c0001t0002g0342 a0001c0001t0002g0343 a0001c0001t0002g0345 a0001c0001t0002g0346 a0001c0001t0002g0348 a0001c0001t0002g0350 a0001c0001t0002g0351 a0001c0001t0002g0352 a0001c0001t0002g0353 a0001c0001t0002g0355 a0001c0001t0002g0356 a0001c0001t0002g0357 a0001c0001t0002g0358 a0001c0001t0002g0359 a0001c0001t0002g0360 a0001c0001t0002g0361 a0001c0001t0002g0362 a0001c0001t0002g0363 a0001c0001t0002g0364 a0001c0001t0002g0365 a0001c0001t0002g0366 a0001c0001t0002g0367 a0001c0001t0002g0368 a0001c0001t0002g0369 a0001c0001t0002g0370 a0001c0001t0002g0374 a0001c0001t0002g0376 a0001c0001t0002g0382 a0001c0004t0002g0263 a0001c0004t0002g0280 a0001c0004t0002g0281 a0001c0004t0002g0314 a0001c0004t0002g0326 a0001c0004t0002g0327 a0001c0004t0002g0329 a0001c0004t0002g0332 a0001c0004t0002g0347 a0001c0004t0002g0349 a0001c0004t0002g0380 a0001c0004t0002g0381 a0002c0002t0002g0273 a0002c0002t0002g0282 a0002c0002t0002g0283 a0002c0002t0002g0313 a0002c0002t0002g0317 a0002c0002t0002g0337 a0002c0002t0003g0270 a0002c0006t0002g0377 a0002c0006t0002g0378 a0002c0006t0002g0379 a0002c0024t0002g0383 a0003c0003t0002g0274 a0003c0003t0002g0315 a0003c0003t0002g0341 a0003c0003t0002g0354 a0003c0003t0002g0373 a0004c0005t0002g0271 a0004c0005t0002g0272 a0004c0005t0002g0372 a0004c0005t0002g0375 a0005c0007t0002g0288 a0005c0007t0002g0306 a0005c0007t0002g0320 a0005c0007t0002g0322 a0005c0007t0002g0324 a0005c0007t0002g0325 a0005c0007t0002g0335 a0006c0008t0002g0371 a0007c0010t0002g0296 a0007c0010t0002g0297 a0007c0010t0002g0300 a0008c0009t0002g0275 a0011c0013t0002g0279 a0011c0013t0002g0334 a0020c0018t0002g0344 a0021c0021t0002g0292	136	386	0.3523	0	c.-44 others(4): Show c.-441T>C	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/2	126885		chr3	TogoVar
CSPG4_chr15_75669322_75717848	75712804	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18995.hp1 NA18998.hp2 NA19062.hp1 NA18995.hp1 NA18998.hp2 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0059 a0001c0001t0010g0240 a0001c0001t0010g0059 a0001c0001t0010g0240	3	374	0.0080	0	c.-49 others(3): Show c.-49C>T	CSPG4	ENSG00000173546.7	transcript	ENST00000308508.5	protein_coding	1/10	49		chr15	TogoVar
CSPG5_chr3_47557238_47583865	47578753	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0038 a0001c0001t0005g0038	1	362	0.0028	0	c.-60 others(3): Show c.-60G>C	CSPG5	ENSG00000114646.10	transcript	ENST00000264723.9	protein_coding	1/5	60		chr3	TogoVar
CSPG5_chr3_47557238_47583865	47578837	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18983.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0149 a0001c0001t0008g0149	1	362	0.0028	0	c.-14 others(4): Show c.-144A>C	CSPG5	ENSG00000114646.10	transcript	ENST00000264723.9	protein_coding	1/5	144		chr3	TogoVar
CSPG5_chr3_47557238_47583865	47578853	G G	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG04184.hp2 HG04184.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0150 a0002c0002t0009g0150	1	362	0.0028	0	c.-16 others(4): Show c.-160C>G	CSPG5	ENSG00000114646.10	transcript	ENST00000264723.9	protein_coding	1/5	160		chr3	TogoVar
CSPP1_chr8_67059392_67201614	67064515	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0058 a0001c0001t0007g0058	1	158	0.0063	0	c.-34 others(3): Show c.-34C>G	CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	1/31	9738		chr8	TogoVar
CSPP1_chr8_67059392_67201614	67064519	T T	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00741.hp1 HG01070.hp1 HG01071.hp1 others(30): Show HG00741.hp1 HG01070.hp1 HG01071.hp1 HG01192.hp1 HG01978.hp1 HG01981.hp1 HG02056.hp1 HG02109.hp1 HG02145.hp2 HG02258.hp2 HG02293.hp2 HG02559.hp1 HG02559.hp2 HG02622.hp1 HG02647.hp2 HG02683.hp1 HG02717.hp2 HG02738.hp1 HG02818.hp1 HG02897.hp1 HG02922.hp1 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03942.hp1 NA18522.hp1 NA18906.hp2 NA20300.hp2	a0002 a0006 a0002 a0006	a0002c0002 a0002c0007 a0006c0008 a0002c0002 a0002c0007 a0006c0008	a0002c0002t0002 a0002c0002t0005 a0002c0007t0002 others(1): Show a0002c0002t0002 a0002c0002t0005 a0002c0007t0002 a0006c0008t0002	a0002c0002t0002g0009 a0002c0002t0002g0110 a0002c0002t0002g0111 others(30): Show a0002c0002t0002g0009 a0002c0002t0002g0110 a0002c0002t0002g0111 a0002c0002t0002g0112 a0002c0002t0002g0113 a0002c0002t0002g0114 a0002c0002t0002g0115 a0002c0002t0002g0116 a0002c0002t0002g0117 a0002c0002t0002g0118 a0002c0002t0002g0119 a0002c0002t0002g0120 a0002c0002t0002g0121 a0002c0002t0002g0122 a0002c0002t0002g0123 a0002c0002t0002g0124 a0002c0002t0002g0127 a0002c0002t0002g0128 a0002c0002t0002g0129 a0002c0002t0002g0130 a0002c0002t0002g0131 a0002c0002t0002g0132 a0002c0002t0002g0134 a0002c0002t0002g0135 a0002c0002t0002g0136 a0002c0002t0002g0137 a0002c0002t0002g0138 a0002c0002t0002g0139 a0002c0002t0005g0133 a0002c0007t0002g0145 a0002c0007t0002g0146 a0006c0008t0002g0125 a0006c0008t0002g0126	33	158	0.2089	0	c.-30 others(3): Show c.-30T>A	CSPP1	ENSG00000104218.16	transcript	ENST00000678616.1	protein_coding	1/31	9734		chr8	TogoVar
CSRNP1_chr3_39136855_39158591	39146691	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00609.hp1 HG00621.hp2 HG01070.hp1 others(49): Show HG00609.hp1 HG00621.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01243.hp2 HG01496.hp2 HG01516.hp2 HG01934.hp1 HG01943.hp2 HG01975.hp1 HG01981.hp1 HG01993.hp1 HG02015.hp2 HG02056.hp1 HG02074.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02486.hp1 HG02572.hp1 HG02622.hp1 HG02647.hp2 HG02895.hp1 HG02897.hp1 HG03041.hp1 HG03098.hp2 HG03453.hp2 HG03486.hp1 HG03516.hp2 HG03540.hp1 HG03834.hp2 HG04115.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18906.hp2 NA18942.hp2 NA18965.hp1 NA18969.hp2 NA18971.hp2 NA18982.hp2 NA18983.hp2 NA19030.hp2 NA19060.hp1 NA19087.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0004	a0001c0001t0009 a0001c0002t0010 a0001c0002t0011 others(2): Show a0001c0001t0009 a0001c0002t0010 a0001c0002t0011 a0002c0003t0004 a0002c0004t0004	a0001c0001t0009g0074 a0001c0002t0010g0075 a0001c0002t0011g0076 others(13): Show a0001c0001t0009g0074 a0001c0002t0010g0075 a0001c0002t0011g0076 a0002c0003t0004g0077 a0002c0004t0004g0002 a0002c0004t0004g0016 a0002c0004t0004g0031 a0002c0004t0004g0032 a0002c0004t0004g0044 a0002c0004t0004g0060 a0002c0004t0004g0072 a0002c0004t0004g0073 a0002c0004t0004g0078 a0002c0004t0004g0102 a0002c0004t0004g0106 a0002c0004t0004g0107	52	430	0.1209	0	c.-9G others(2): Show c.-9G>A	CSRNP1	ENSG00000144655.15	transcript	ENST00000273153.10	protein_coding	2/5	9		chr3	TogoVar
CSRNP2_chr12_51056205_51088596	51083441	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02622.hp2 HG03209.hp1 HG02622.hp2 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0290 a0001c0001t0013g0291 a0001c0001t0013g0290 a0001c0001t0013g0291	2	420	0.0048	0	c.-18 others(4): Show c.-189C>T	CSRNP2	ENSG00000110925.7	transcript	ENST00000228515.6	protein_coding	1/5	6880		chr12	TogoVar
CSRNP2_chr12_51056205_51088596	51083476	CAGGGCGG others(6): Show CAGGGCGGGGAGGG	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19088.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0292 a0001c0001t0029g0292	1	420	0.0024	-13	c.-23 others(22): Show c.-237_-225delCCCTCCCCGCCCT	CSRNP2	ENSG00000110925.7	transcript	ENST00000228515.6	protein_coding	1/5	6916		chr12	TogoVar
CSRNP2_chr12_51056205_51088596	51083523	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0293 a0001c0001t0030g0293	1	420	0.0024	0	c.-27 others(4): Show c.-271C>T	CSRNP2	ENSG00000110925.7	transcript	ENST00000228515.6	protein_coding	1/5	6962		chr12	TogoVar
CSRNP2_chr12_51056205_51088596	51083564	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02451.hp1 HG02630.hp2 HG02886.hp2 others(4): Show HG02451.hp1 HG02630.hp2 HG02886.hp2 HG03041.hp2 HG03195.hp2 HG03453.hp1 NA19043.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0010 a0001c0001 a0005c0010	a0001c0001t0006 a0001c0001t0009 a0005c0010t0014 a0001c0001t0006 a0001c0001t0009 a0005c0010t0014	a0001c0001t0006g0053 a0001c0001t0006g0054 a0001c0001t0006g0055 others(4): Show a0001c0001t0006g0053 a0001c0001t0006g0054 a0001c0001t0006g0055 a0001c0001t0006g0056 a0001c0001t0009g0058 a0001c0001t0009g0059 a0005c0010t0014g0057	7	420	0.0167	0	c.-31 others(4): Show c.-312T>C	CSRNP2	ENSG00000110925.7	transcript	ENST00000228515.6	protein_coding	1/5	7003		chr12	TogoVar
CSRNP3_chr2_165464698_165694407	165595065	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0120 a0001c0001t0030g0120	1	246	0.0041	0	c.-1G others(2): Show c.-1G>A	CSRNP3	ENSG00000178662.16	transcript	ENST00000651982.1	protein_coding	4/7	1		chr2	TogoVar
CSRP2_chr12_76853709_76884019	76878994	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02572.hp1 HG02809.hp2 HG03225.hp1 HG02572.hp1 HG02809.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0027	3	388	0.0077	0	c.-58 others(3): Show c.-58C>A	CSRP2	ENSG00000175183.10	transcript	ENST00000311083.10	protein_coding	1/6	12734		chr12	TogoVar
CSRP2_chr12_76853709_76884019	76878997	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0358 a0001c0001t0007g0358	1	388	0.0026	0	c.-61 others(3): Show c.-61C>T	CSRP2	ENSG00000175183.10	transcript	ENST00000311083.10	protein_coding	1/6	12737		chr12	TogoVar
CSRP3_chr11_19177030_19206983	19201982	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0038 a0001c0001t0004g0038	1	416	0.0024	0	c.-57 others(3): Show c.-57G>A	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/6	9534		chr11	TogoVar
CST11_chr20_23445412_23457876	23452817	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01109.hp1 HG01891.hp2 HG02559.hp1 others(3): Show HG01109.hp1 HG01891.hp2 HG02559.hp1 HG02572.hp2 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0002t0002g0011 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0002t0002g0011	6	446	0.0135	0	c.-6T others(2): Show c.-6T>C	CST11	ENSG00000125831.10	transcript	ENST00000377009.8	protein_coding	1/3	6		chr20	TogoVar
CST11_chr20_23445412_23457876	23452838	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0045 a0001c0002t0003g0045	1	446	0.0022	0	c.-27 others(3): Show c.-27C>T	CST11	ENSG00000125831.10	transcript	ENST00000377009.8	protein_coding	1/3	27		chr20	TogoVar
CST1_chr20_23742562_23755935	23750923	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(387): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp2 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp2 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19067.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011	a0001c0001 a0001c0002 a0001c0014 others(11): Show a0001c0001 a0001c0002 a0001c0014 a0002c0003 a0003c0004 a0003c0007 a0004c0005 a0005c0006 a0006c0011 a0007c0010 a0008c0008 a0009c0009 a0010c0012 a0011c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0002t0001 a0001c0002t0004 a0001c0014t0001 a0002c0003t0004 a0003c0004t0002 a0003c0004t0004 a0003c0004t0010 a0003c0007t0002 a0004c0005t0001 a0004c0005t0005 a0004c0005t0007 a0004c0005t0012 a0004c0005t0016 a0005c0006t0001 a0006c0011t0001 a0007c0010t0001 a0008c0008t0002 a0009c0009t0001 a0010c0012t0001 a0011c0013t0001	a0001c0001t0001g0001 a0001c0001t0001g0017 a0001c0001t0001g0028 others(63): Show a0001c0001t0001g0001 a0001c0001t0001g0017 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0042 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0002g0005 a0001c0001t0002g0016 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0004g0012 a0001c0001t0004g0047 a0001c0001t0007g0018 a0001c0001t0008g0021 a0001c0001t0013g0055 a0001c0001t0014g0048 a0001c0001t0015g0056 a0001c0001t0017g0059 a0001c0002t0001g0004 a0001c0002t0001g0010 a0001c0002t0001g0011 a0001c0002t0001g0015 a0001c0002t0001g0019 a0001c0002t0001g0024 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0037 a0001c0002t0004g0006 a0001c0002t0004g0035 a0001c0002t0004g0036 a0001c0014t0001g0071 a0002c0003t0004g0072 a0003c0004t0002g0003 a0003c0004t0002g0007 a0003c0004t0002g0025 a0003c0004t0002g0038 a0003c0004t0002g0039 a0003c0004t0002g0041 a0003c0004t0004g0008 a0003c0004t0010g0026 a0003c0007t0002g0040 a0004c0005t0001g0014 a0004c0005t0005g0013 a0004c0005t0005g0066 a0004c0005t0005g0069 a0004c0005t0007g0065 a0004c0005t0012g0067 a0004c0005t0016g0068 a0005c0006t0001g0020 a0005c0006t0001g0027 a0005c0006t0001g0043 a0006c0011t0001g0063 a0007c0010t0001g0060 a0008c0008t0002g0046 a0009c0009t0001g0049 a0010c0012t0001g0064 a0011c0013t0001g0070	390	472	0.8263	0	c.-57 others(3): Show c.-57G>A	CST1	ENSG00000170373.9	transcript	ENST00000304749.7	protein_coding	1/3	57		chr20	TogoVar
CST3_chr20_23628657_23642955	23637910	T T	TGGAGCTA others(8): Show TGGAGCTAGATAGAGA	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00408.hp2 HG00423.hp2 HG00621.hp1 others(24): Show HG00408.hp2 HG00423.hp2 HG00621.hp1 HG02056.hp2 HG02074.hp2 HG02083.hp1 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp2 NA18961.hp2 NA18967.hp1 NA18969.hp2 NA18970.hp1 NA18980.hp1 NA18982.hp2 NA18986.hp2 NA18993.hp1 NA18993.hp2 NA19056.hp2 NA19074.hp2 NA19079.hp2 NA19087.hp1 NA19090.hp1 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0005 a0001c0001t0003g0049 a0001c0001t0003g0005 a0001c0001t0003g0049	27	420	0.0643	15	c.-63 others(22): Show c.-63_-49dupTCTCTATCTAGCTCC	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding	1/3	49		chr20	TogoVar
CST3_chr20_23628657_23642955	23637928	A A	AGCTAGAT others(7): Show AGCTAGATAGAGAGG	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0050 a0001c0001t0007g0050	1	420	0.0024	14	c.-67 others(21): Show c.-67_-66insCCTCTCTATCTAGC	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding	1/3	67		chr20	TogoVar
CST3_chr20_23628657_23642955	23637929	C C	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0050 a0001c0001t0007g0050	1	420	0.0024	0	c.-67 others(3): Show c.-67G>T	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding	1/3	67		chr20	TogoVar
CST3_chr20_23628657_23642955	23637934	T T	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG01070.hp2 HG01099.hp2 others(70): Show HG00140.hp1 HG01070.hp2 HG01099.hp2 HG01256.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01993.hp2 HG02074.hp1 HG02080.hp2 HG02148.hp2 HG02155.hp2 HG02258.hp1 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02683.hp1 HG02698.hp2 HG02717.hp2 HG02738.hp1 HG02922.hp1 HG03017.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03239.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp2 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 NA18612.hp2 NA18941.hp1 NA18944.hp2 NA18946.hp1 NA18953.hp1 NA18955.hp1 NA18955.hp2 NA18963.hp2 NA18974.hp1 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18990.hp2 NA18991.hp1 NA18998.hp1 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19054.hp2 NA19057.hp2 NA19064.hp1 NA19068.hp1 NA19076.hp1 NA19083.hp1 NA19084.hp2 NA19091.hp2 NA19240.hp1 NA20805.hp2 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0004 a0002c0002t0002 a0002c0002t0004	a0002c0002t0002g0003 a0002c0002t0002g0022 a0002c0002t0002g0051 others(6): Show a0002c0002t0002g0003 a0002c0002t0002g0022 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0055 a0002c0002t0002g0056 a0002c0002t0004g0014	73	420	0.1738	0	c.-72 others(3): Show c.-72A>C	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding	1/3	72		chr20	TogoVar
CST3_chr20_23628657_23642955	23637942	C C	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0023 a0001c0001t0006g0023	1	420	0.0024	0	c.-80 others(3): Show c.-80G>C	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding	1/3	80		chr20	TogoVar
CST3_chr20_23628657_23642955	23637942	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00140.hp1 HG03491.hp2 HG00140.hp1 HG03491.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0014 a0002c0002t0004g0014	2	420	0.0048	0	c.-80 others(3): Show c.-80G>A	CST3	ENSG00000101439.9	transcript	ENST00000376925.8	protein_coding	1/3	80		chr20	TogoVar
CST4_chr20_23680640_23694038	23689012	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0055 a0001c0001t0008g0055	1	452	0.0022	0	c.-43 others(3): Show c.-43C>T	CST4	ENSG00000101441.5	transcript	ENST00000217423.4	protein_coding	1/3	43		chr20	TogoVar
CST4_chr20_23680640_23694038	23689026	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00597.hp1 HG00738.hp1 HG01099.hp1 others(74): Show HG00597.hp1 HG00738.hp1 HG01099.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01891.hp2 HG01943.hp2 HG01981.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02615.hp2 HG02683.hp2 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp1 HG02922.hp1 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03139.hp1 HG03209.hp2 HG03453.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03579.hp1 HG03654.hp1 HG03688.hp2 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04228.hp2 HG06807.hp1 NA18943.hp1 NA18947.hp2 NA18952.hp2 NA18968.hp2 NA18969.hp2 NA18973.hp1 NA18977.hp1 NA18978.hp2 NA18980.hp2 NA18983.hp2 NA18986.hp2 NA18989.hp1 NA19000.hp2 NA19012.hp2 NA19030.hp1 NA19088.hp1 NA19088.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp2	a0001 a0003 a0005 a0001 a0003 a0005	a0001c0001 a0001c0006 a0003c0004 others(1): Show a0001c0001 a0001c0006 a0003c0004 a0005c0010	a0001c0001t0003 a0001c0001t0005 a0001c0006t0003 others(2): Show a0001c0001t0003 a0001c0001t0005 a0001c0006t0003 a0003c0004t0003 a0005c0010t0003	a0001c0001t0003g0002 a0001c0001t0003g0027 a0001c0001t0003g0028 others(6): Show a0001c0001t0003g0002 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0005g0031 a0001c0006t0003g0026 a0003c0004t0003g0011 a0005c0010t0003g0025	77	452	0.1704	0	c.-57 others(3): Show c.-57G>A	CST4	ENSG00000101441.5	transcript	ENST00000217423.4	protein_coding	1/3	57		chr20	TogoVar
CST5_chr20_23870934_23884748	23879694	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0026 a0002c0002t0003g0026	1	446	0.0022	0	c.-18 others(3): Show c.-18T>C	CST5	ENSG00000170367.5	transcript	ENST00000304710.5	protein_coding	1/3	18		chr20	TogoVar
CST7_chr20_24944269_24964928	24949275	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0005 a0001c0001t0013g0005	1	350	0.0029	0	c.-23 others(4): Show c.-231C>T	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/4	231		chr20	TogoVar
CST7_chr20_24944269_24964928	24949277	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00642.hp2 HG00735.hp1 HG00738.hp2 others(27): Show HG00642.hp2 HG00735.hp1 HG00738.hp2 HG01069.hp2 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01257.hp2 HG01258.hp1 HG01346.hp2 HG01515.hp1 HG01516.hp1 HG01517.hp1 HG02055.hp2 HG02145.hp2 HG02300.hp2 HG02486.hp2 HG02572.hp1 HG02630.hp1 HG02717.hp2 HG02809.hp1 HG02965.hp2 HG03098.hp2 HG03579.hp2 HG03669.hp1 HG06807.hp2 NA18906.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0010 a0001c0001t0012 a0001c0002t0004 others(1): Show a0001c0001t0010 a0001c0001t0012 a0001c0002t0004 a0001c0002t0009	a0001c0001t0010g0102 a0001c0001t0010g0104 a0001c0001t0012g0103 others(12): Show a0001c0001t0010g0102 a0001c0001t0010g0104 a0001c0001t0012g0103 a0001c0002t0004g0004 a0001c0002t0004g0022 a0001c0002t0004g0034 a0001c0002t0004g0042 a0001c0002t0004g0105 a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 a0001c0002t0004g0109 a0001c0002t0004g0110 a0001c0002t0004g0113 a0001c0002t0009g0033	30	350	0.0857	0	c.-22 others(4): Show c.-229A>G	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/4	229		chr20	TogoVar
CST7_chr20_24944269_24964928	24949311	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp2 HG01123.hp2 HG01168.hp2 others(36): Show HG00639.hp2 HG01123.hp2 HG01168.hp2 HG01192.hp1 HG01256.hp1 HG01258.hp2 HG01358.hp2 HG01515.hp2 HG01884.hp2 HG02109.hp1 HG02293.hp1 HG02602.hp1 HG02735.hp2 HG02976.hp2 HG03453.hp2 HG03654.hp2 HG03927.hp2 HG06807.hp1 NA18948.hp2 NA18954.hp2 NA18956.hp2 NA18965.hp1 NA18973.hp2 NA18977.hp1 NA18979.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19009.hp2 NA19054.hp2 NA19057.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp2 NA19079.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0002 a0003c0004 a0004c0006 a0001c0002 a0003c0004 a0004c0006	a0001c0002t0003 a0001c0002t0006 a0003c0004t0003 others(1): Show a0001c0002t0003 a0001c0002t0006 a0003c0004t0003 a0004c0006t0003	a0001c0002t0003g0002 a0001c0002t0003g0010 a0001c0002t0003g0017 others(13): Show a0001c0002t0003g0002 a0001c0002t0003g0010 a0001c0002t0003g0017 a0001c0002t0003g0024 a0001c0002t0003g0025 a0001c0002t0003g0037 a0001c0002t0003g0047 a0001c0002t0003g0048 a0001c0002t0003g0049 a0001c0002t0003g0050 a0001c0002t0003g0051 a0001c0002t0003g0052 a0001c0002t0003g0053 a0001c0002t0006g0010 a0003c0004t0003g0043 a0004c0006t0003g0002	39	350	0.1114	0	c.-19 others(4): Show c.-195C>T	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/4	195		chr20	TogoVar
CST7_chr20_24944269_24964928	24949384	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02572.hp1 HG02965.hp2 HG03098.hp2 HG02572.hp1 HG02965.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0012 a0001c0001t0010 a0001c0001t0012	a0001c0001t0010g0102 a0001c0001t0010g0104 a0001c0001t0012g0103 a0001c0001t0010g0102 a0001c0001t0010g0104 a0001c0001t0012g0103	3	350	0.0086	0	c.-12 others(4): Show c.-122C>T	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/4	122		chr20	TogoVar
CST7_chr20_24944269_24964928	24949419	A A	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18906.hp2 NA19240.hp2 NA18906.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0033 a0001c0002t0009g0033	2	350	0.0057	0	c.-87 others(3): Show c.-87A>C	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/4	87		chr20	TogoVar
CST7_chr20_24944269_24964928	24949449	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00639.hp2 HG01123.hp2 HG01168.hp2 others(36): Show HG00639.hp2 HG01123.hp2 HG01168.hp2 HG01192.hp1 HG01256.hp1 HG01258.hp2 HG01358.hp2 HG01515.hp2 HG01884.hp2 HG02109.hp1 HG02293.hp1 HG02602.hp1 HG02735.hp2 HG02976.hp2 HG03453.hp2 HG03654.hp2 HG03927.hp2 HG06807.hp1 NA18948.hp2 NA18954.hp2 NA18956.hp2 NA18965.hp1 NA18973.hp2 NA18977.hp1 NA18979.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA19009.hp2 NA19054.hp2 NA19057.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp2 NA19079.hp2 NA19084.hp1 NA19085.hp2 NA19087.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0002 a0003c0004 a0004c0006 a0001c0002 a0003c0004 a0004c0006	a0001c0002t0003 a0001c0002t0006 a0003c0004t0003 others(1): Show a0001c0002t0003 a0001c0002t0006 a0003c0004t0003 a0004c0006t0003	a0001c0002t0003g0002 a0001c0002t0003g0010 a0001c0002t0003g0017 others(13): Show a0001c0002t0003g0002 a0001c0002t0003g0010 a0001c0002t0003g0017 a0001c0002t0003g0024 a0001c0002t0003g0025 a0001c0002t0003g0037 a0001c0002t0003g0047 a0001c0002t0003g0048 a0001c0002t0003g0049 a0001c0002t0003g0050 a0001c0002t0003g0051 a0001c0002t0003g0052 a0001c0002t0003g0053 a0001c0002t0006g0010 a0003c0004t0003g0043 a0004c0006t0003g0002	39	350	0.1114	0	c.-57 others(3): Show c.-57G>A	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/4	57		chr20	TogoVar
CST7_chr20_24944269_24964928	24949501	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18973.hp2 NA18995.hp2 NA19054.hp2 others(1): Show NA18973.hp2 NA18995.hp2 NA19054.hp2 NA19085.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0010 a0001c0002t0006g0010	4	350	0.0114	0	c.-5C others(2): Show c.-5C>T	CST7	ENSG00000077984.6	transcript	ENST00000480798.2	protein_coding	1/4	5		chr20	TogoVar
CST8_chr20_23486117_23501010	23491117	A A	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01361.hp1 HG02486.hp1 HG02559.hp2 others(5): Show HG01361.hp1 HG02486.hp1 HG02559.hp2 HG02615.hp2 HG03041.hp2 HG03209.hp2 HG03453.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0006 a0001c0001t0003g0009 a0001c0001t0003g0003 a0001c0001t0003g0006 a0001c0001t0003g0009	8	440	0.0182	0	c.-36 others(4): Show c.-369A>G	CST8	ENSG00000125815.9	transcript	ENST00000246012.2	protein_coding	1/4	551		chr20	TogoVar
CST8_chr20_23486117_23501010	23491134	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0003 a0001c0001t0006g0003	1	440	0.0023	0	c.-35 others(4): Show c.-352C>T	CST8	ENSG00000125815.9	transcript	ENST00000246012.2	protein_coding	1/4	534		chr20	TogoVar
CST8_chr20_23486117_23501010	23491202	A A	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0004 a0001c0001t0005g0004	1	440	0.0023	0	c.-28 others(4): Show c.-284A>C	CST8	ENSG00000125815.9	transcript	ENST00000246012.2	protein_coding	1/4	466		chr20	TogoVar
CST8_chr20_23486117_23501010	23491203	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0004 a0001c0001t0005g0004	1	440	0.0023	0	c.-28 others(4): Show c.-283G>A	CST8	ENSG00000125815.9	transcript	ENST00000246012.2	protein_coding	1/4	465		chr20	TogoVar
CST8_chr20_23486117_23501010	23491267	C C	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01243.hp1 HG02486.hp2 HG02622.hp2 others(6): Show HG01243.hp1 HG02486.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02818.hp1 HG02922.hp1 HG02976.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0024 a0001c0002t0002g0012 a0001c0002t0002g0039 a0001c0001t0002g0024 a0001c0002t0002g0012 a0001c0002t0002g0039	9	440	0.0205	0	c.-21 others(4): Show c.-219C>T	CST8	ENSG00000125815.9	transcript	ENST00000246012.2	protein_coding	1/4	401		chr20	TogoVar
CST8_chr20_23486117_23501010	23491312	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG01975.hp1 HG01975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0003 a0001c0001t0004g0003	1	440	0.0023	0	c.-17 others(4): Show c.-174G>A	CST8	ENSG00000125815.9	transcript	ENST00000246012.2	protein_coding	1/4	356		chr20	TogoVar
CST9L_chr20_23559732_23573484	23568470	G G	A A	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02976.hp2 HG03471.hp1 HG02976.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0031 a0001c0001t0002g0031	2	392	0.0051	0	c.-20 others(3): Show c.-20C>T	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding	1/3	20		chr20	TogoVar
CST9L_chr20_23559732_23573484	23568470	G G	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0032 a0001c0001t0003g0032	1	392	0.0026	0	c.-20 others(3): Show c.-20C>A	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding	1/3	20		chr20	TogoVar

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