JoGo: Joint Open Genome and Omics Platform

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AHCTF1_chr1_246834098_246936948	246840126	A A	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01975.hp2 HG01975.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0016	a0002c0002t0016g0052 a0002c0002t0016g0052	1	376	0.0027	0	c.68 others(4): Show c.680T>A	AHCTF1	ENSG00000153207.16	transcript	ENST00000648844.2	protein_coding	36/36	680		chr1	TogoVar
AHCTF1_chr1_246834098_246936948	246840191	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0020 a0001c0004t0020	a0001c0004t0020g0147 a0001c0004t0020g0147	1	376	0.0027	0	c.61 others(4): Show c.615C>T	AHCTF1	ENSG00000153207.16	transcript	ENST00000648844.2	protein_coding	36/36	615		chr1	TogoVar
AHCTF1_chr1_246834098_246936948	246840729	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00733.hp1 HG00735.hp2 HG01175.hp2 others(34): Show HG00733.hp1 HG00735.hp2 HG01175.hp2 HG01243.hp1 HG01346.hp1 HG01884.hp1 HG02055.hp1 HG02257.hp1 HG02258.hp1 HG02300.hp1 HG02451.hp1 HG02615.hp2 HG02630.hp2 HG02698.hp2 HG02717.hp2 HG02818.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03195.hp1 HG03225.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG04115.hp2 HG04228.hp2 HG06807.hp2 NA18906.hp1 NA20129.hp2	a0001 a0002 a0009 others(2): Show a0001 a0002 a0009 a0017 a0020	a0001c0001 a0001c0004 a0001c0012 others(6): Show a0001c0001 a0001c0004 a0001c0012 a0001c0044 a0002c0008 a0009c0034 a0009c0035 a0017c0040 a0020c0036	a0001c0001t0002 a0001c0004t0002 a0001c0004t0008 others(10): Show a0001c0001t0002 a0001c0004t0002 a0001c0004t0008 a0001c0004t0012 a0001c0004t0015 a0001c0004t0020 a0001c0012t0002 a0001c0044t0002 a0002c0008t0002 a0009c0034t0002 a0009c0035t0002 a0017c0040t0002 a0020c0036t0002	a0001c0001t0002g0034 a0001c0004t0002g0021 a0001c0004t0002g0022 others(34): Show a0001c0001t0002g0034 a0001c0004t0002g0021 a0001c0004t0002g0022 a0001c0004t0002g0023 a0001c0004t0002g0059 a0001c0004t0002g0143 a0001c0004t0002g0145 a0001c0004t0002g0146 a0001c0004t0002g0148 a0001c0004t0002g0158 a0001c0004t0002g0161 a0001c0004t0002g0167 a0001c0004t0002g0253 a0001c0004t0002g0290 a0001c0004t0002g0291 a0001c0004t0002g0298 a0001c0004t0002g0327 a0001c0004t0002g0340 a0001c0004t0002g0356 a0001c0004t0002g0357 a0001c0004t0008g0294 a0001c0004t0008g0325 a0001c0004t0008g0326 a0001c0004t0012g0355 a0001c0004t0012g0359 a0001c0004t0015g0010 a0001c0004t0020g0147 a0001c0012t0002g0268 a0001c0012t0002g0269 a0001c0044t0002g0149 a0002c0008t0002g0068 a0002c0008t0002g0074 a0002c0008t0002g0127 a0009c0034t0002g0164 a0009c0035t0002g0165 a0017c0040t0002g0358 a0020c0036t0002g0166	37	376	0.0984	0	c.77 others(3): Show c.77A>G	AHCTF1	ENSG00000153207.16	transcript	ENST00000648844.2	protein_coding	36/36	77		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110021686	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0065 a0001c0001t0013g0065	1	350	0.0029	0	c.6C others(2): Show c.6C>T	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	6		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110021987	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0014 a0001c0004t0014	a0001c0004t0014g0094 a0001c0004t0014g0094	1	350	0.0029	0	c.30 others(4): Show c.307T>C	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	307		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022028	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0185 a0001c0001t0015g0185	1	350	0.0029	0	c.34 others(4): Show c.348G>A	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	348		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022042	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0166 a0001c0001t0016g0166	1	350	0.0029	0	c.36 others(4): Show c.362G>A	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	362		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022374	C C	CA CA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02965.hp1 HG03098.hp2 HG03139.hp1 others(5): Show HG02965.hp1 HG03098.hp2 HG03139.hp1 HG03834.hp1 NA18978.hp2 NA19005.hp1 NA19030.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 others(1): Show a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0017	a0001c0001t0007g0016 a0001c0001t0007g0053 a0001c0001t0007g0171 others(4): Show a0001c0001t0007g0016 a0001c0001t0007g0053 a0001c0001t0007g0171 a0001c0001t0009g0174 a0001c0001t0009g0175 a0001c0001t0010g0024 a0001c0001t0017g0052	8	350	0.0229	1	c.70 others(5): Show c.709dupA	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	710	INFO_REALIGN_3_PRIME	chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022374	CAAAAA CAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02145.hp1 HG02258.hp1 HG02258.hp2 others(9): Show HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02717.hp2 HG02897.hp1 HG02976.hp1 HG03041.hp1 HG03225.hp2 HG03516.hp1 HG03579.hp1 NA18906.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0019 a0001c0001t0004 a0001c0001t0019	a0001c0001t0004g0013 a0001c0001t0004g0031 a0001c0001t0004g0106 others(5): Show a0001c0001t0004g0013 a0001c0001t0004g0031 a0001c0001t0004g0106 a0001c0001t0004g0107 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0199 a0001c0001t0019g0013	12	350	0.0343	-5	c.70 others(14): Show c.705_*709delAAAAA	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	705	INFO_REALIGN_3_PRIME	chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022412	T T	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02965.hp1 HG03098.hp2 HG03834.hp1 others(2): Show HG02965.hp1 HG03098.hp2 HG03834.hp1 NA19030.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0010 a0001c0001t0017 a0001c0001t0009 a0001c0001t0010 a0001c0001t0017	a0001c0001t0009g0174 a0001c0001t0009g0175 a0001c0001t0010g0024 others(1): Show a0001c0001t0009g0174 a0001c0001t0009g0175 a0001c0001t0010g0024 a0001c0001t0017g0052	5	350	0.0143	0	c.73 others(4): Show c.732T>G	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	732		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022462	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02055.hp1 HG02809.hp1 HG02055.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0100 a0001c0001t0011g0103 a0001c0001t0011g0100 a0001c0001t0011g0103	2	350	0.0057	0	c.78 others(4): Show c.782T>C	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	782		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022543	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00597.hp2 HG02004.hp2 HG02071.hp1 others(14): Show HG00597.hp2 HG02004.hp2 HG02071.hp1 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02293.hp2 NA18943.hp2 NA18948.hp1 NA18949.hp2 NA18952.hp1 NA18954.hp2 NA18956.hp2 NA18957.hp1 NA18969.hp2 NA19074.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0148 a0001c0001t0003g0150 others(4): Show a0001c0001t0003g0003 a0001c0001t0003g0148 a0001c0001t0003g0150 a0001c0001t0003g0156 a0001c0001t0003g0160 a0001c0001t0003g0161 a0001c0001t0003g0173	17	350	0.0486	0	c.86 others(4): Show c.863G>A	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	863		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110022892	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03834.hp1 NA20905.hp1 HG03834.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0024 a0001c0001t0010g0024	2	350	0.0057	0	c.12 others(5): Show c.1212C>T	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	1212		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110023340	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02965.hp1 HG03098.hp2 HG03834.hp1 others(2): Show HG02965.hp1 HG03098.hp2 HG03834.hp1 NA19030.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0010 a0001c0001t0017 a0001c0001t0009 a0001c0001t0010 a0001c0001t0017	a0001c0001t0009g0174 a0001c0001t0009g0175 a0001c0001t0010g0024 others(1): Show a0001c0001t0009g0174 a0001c0001t0009g0175 a0001c0001t0010g0024 a0001c0001t0017g0052	5	350	0.0143	0	c.16 others(5): Show c.1660C>T	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	1660		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110023550	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02015.hp2 HG02080.hp1 HG02129.hp1 HG02015.hp2 HG02080.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0015 a0001c0001t0008g0152 a0001c0001t0008g0153 a0001c0001t0008g0015 a0001c0001t0008g0152 a0001c0001t0008g0153	3	350	0.0086	0	c.18 others(5): Show c.1870G>A	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	1870		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110023556	T T	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0033 a0001c0001t0018g0033	1	350	0.0029	0	c.18 others(5): Show c.1876T>A	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	1876		chr1	TogoVar
AHCYL1_chr1_109979765_110028742	110023588	T T	TA TA	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02109.hp2 HG02486.hp1 HG02723.hp1 others(5): Show HG02109.hp2 HG02486.hp1 HG02723.hp1 HG02809.hp2 HG03130.hp2 HG03453.hp1 NA19030.hp1 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0005 a0001c0001t0017 a0001c0001t0019 others(1): Show a0001c0001t0005 a0001c0001t0017 a0001c0001t0019 a0003c0005t0005	a0001c0001t0005g0006 a0001c0001t0005g0044 a0001c0001t0005g0045 others(5): Show a0001c0001t0005g0006 a0001c0001t0005g0044 a0001c0001t0005g0045 a0001c0001t0005g0046 a0001c0001t0005g0047 a0001c0001t0017g0052 a0001c0001t0019g0013 a0003c0005t0005g0048	8	350	0.0229	1	c.19 others(6): Show c.1922dupA	AHCYL1	ENSG00000168710.18	transcript	ENST00000369799.10	protein_coding	17/17	1923	INFO_REALIGN_3_PRIME	chr1	TogoVar
AHCYL2_chr7_129220030_129435211	129427212	T T	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00408.hp2 HG00423.hp2 others(78): Show HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00558.hp1 HG00597.hp1 HG00673.hp2 HG00733.hp2 HG00738.hp2 HG00741.hp2 HG01081.hp2 HG01109.hp2 HG01346.hp1 HG01361.hp1 HG01515.hp1 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02074.hp2 HG02135.hp2 HG02145.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02602.hp2 HG02738.hp1 HG03239.hp1 HG03491.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG04115.hp2 HG04199.hp1 HG04228.hp2 HG06807.hp1 NA18747.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18948.hp1 NA18950.hp1 NA18952.hp1 NA18955.hp2 NA18959.hp1 NA18962.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp2 NA18970.hp2 NA18972.hp2 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18985.hp1 NA18987.hp1 NA18989.hp1 NA18993.hp2 NA18994.hp2 NA18995.hp2 NA19002.hp1 NA19010.hp2 NA19012.hp2 NA19054.hp2 NA19060.hp2 NA19063.hp2 NA19066.hp2 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19079.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 others(4): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0019 a0001c0001t0020 a0001c0002t0003 a0001c0002t0004	a0001c0001t0003g0091 a0001c0001t0003g0135 a0001c0001t0003g0139 others(78): Show a0001c0001t0003g0091 a0001c0001t0003g0135 a0001c0001t0003g0139 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0145 a0001c0001t0003g0146 a0001c0001t0003g0148 a0001c0001t0003g0154 a0001c0001t0003g0156 a0001c0001t0003g0157 a0001c0001t0003g0159 a0001c0001t0003g0160 a0001c0001t0003g0162 a0001c0001t0003g0164 a0001c0001t0003g0182 a0001c0001t0003g0187 a0001c0001t0004g0007 a0001c0001t0004g0136 a0001c0001t0004g0137 a0001c0001t0004g0141 a0001c0001t0004g0144 a0001c0001t0004g0158 a0001c0001t0004g0165 a0001c0001t0004g0166 a0001c0001t0008g0150 a0001c0001t0008g0163 a0001c0001t0008g0184 a0001c0001t0019g0155 a0001c0001t0020g0161 a0001c0002t0003g0189 a0001c0002t0003g0193 a0001c0002t0003g0194 a0001c0002t0003g0195 a0001c0002t0003g0197 a0001c0002t0003g0205 a0001c0002t0003g0206 a0001c0002t0003g0207 a0001c0002t0003g0208 a0001c0002t0003g0209 a0001c0002t0003g0210 a0001c0002t0003g0213 a0001c0002t0003g0214 a0001c0002t0003g0220 a0001c0002t0003g0221 a0001c0002t0003g0222 a0001c0002t0003g0223 a0001c0002t0003g0224 a0001c0002t0003g0225 a0001c0002t0003g0226 a0001c0002t0003g0227 a0001c0002t0003g0228 a0001c0002t0003g0229 a0001c0002t0003g0230 a0001c0002t0003g0231 a0001c0002t0003g0232 a0001c0002t0003g0233 a0001c0002t0003g0234 a0001c0002t0003g0235 a0001c0002t0003g0237 a0001c0002t0003g0238 a0001c0002t0003g0239 a0001c0002t0003g0240 a0001c0002t0003g0241 a0001c0002t0003g0242 a0001c0002t0003g0243 a0001c0002t0003g0244 a0001c0002t0003g0245 a0001c0002t0003g0246 a0001c0002t0003g0247 a0001c0002t0003g0252 a0001c0002t0003g0256 a0001c0002t0003g0257 a0001c0002t0003g0258 a0001c0002t0003g0259 a0001c0002t0003g0261 a0001c0002t0003g0264 a0001c0002t0003g0266 a0001c0002t0003g0271 a0001c0002t0003g0272 a0001c0002t0004g0236	81	292	0.2774	0	c.16 others(4): Show c.167T>C	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	167		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129427958	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01257.hp2 HG01496.hp1 HG02683.hp2 others(3): Show HG01257.hp2 HG01496.hp1 HG02683.hp2 HG04184.hp1 HG04204.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0002t0010 a0001c0001t0009 a0001c0002t0010	a0001c0001t0009g0089 a0001c0001t0009g0090 a0001c0001t0009g0099 others(3): Show a0001c0001t0009g0089 a0001c0001t0009g0090 a0001c0001t0009g0099 a0001c0002t0010g0273 a0001c0002t0010g0274 a0001c0002t0010g0275	6	292	0.0206	0	c.91 others(4): Show c.913G>A	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	913		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428004	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01123.hp2 HG02273.hp2 HG04115.hp1 HG01123.hp2 HG02273.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0033 a0001c0001t0011g0290 a0001c0001t0011g0291 a0001c0001t0011g0033 a0001c0001t0011g0290 a0001c0001t0011g0291	3	292	0.0103	0	c.95 others(4): Show c.959G>A	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	959		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428099	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0161 a0001c0001t0020g0161	1	292	0.0034	0	c.10 others(5): Show c.1054C>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	1054		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428184	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp1 HG02572.hp2 HG02717.hp2 others(5): Show HG02486.hp1 HG02572.hp2 HG02717.hp2 HG02809.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0026 a0001c0001t0027 others(1): Show a0001c0001t0006 a0001c0001t0026 a0001c0001t0027 a0001c0002t0006	a0001c0001t0006g0116 a0001c0001t0006g0117 a0001c0001t0006g0126 others(5): Show a0001c0001t0006g0116 a0001c0001t0006g0117 a0001c0001t0006g0126 a0001c0001t0006g0127 a0001c0001t0006g0128 a0001c0001t0026g0152 a0001c0001t0027g0045 a0001c0002t0006g0219	8	292	0.0274	0	c.11 others(5): Show c.1139C>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	1139		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428185	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0045 a0001c0001t0027g0045	1	292	0.0034	0	c.11 others(5): Show c.1140A>G	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	1140		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428232	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0082 a0001c0001t0025g0082	1	292	0.0034	0	c.11 others(5): Show c.1187A>G	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	1187		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428306	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00140.hp1 HG00408.hp2 HG00423.hp2 others(78): Show HG00140.hp1 HG00408.hp2 HG00423.hp2 HG00558.hp1 HG00597.hp1 HG00673.hp2 HG00733.hp2 HG00738.hp2 HG00741.hp2 HG01081.hp2 HG01109.hp2 HG01346.hp1 HG01361.hp1 HG01515.hp1 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02074.hp2 HG02135.hp2 HG02145.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp2 HG02602.hp2 HG02738.hp1 HG03239.hp1 HG03491.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG04115.hp2 HG04199.hp1 HG04228.hp2 HG06807.hp1 NA18747.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18948.hp1 NA18950.hp1 NA18952.hp1 NA18955.hp2 NA18959.hp1 NA18962.hp1 NA18966.hp2 NA18968.hp2 NA18969.hp2 NA18970.hp2 NA18972.hp2 NA18974.hp1 NA18977.hp1 NA18979.hp2 NA18980.hp2 NA18982.hp2 NA18985.hp1 NA18987.hp1 NA18989.hp1 NA18993.hp2 NA18994.hp2 NA18995.hp2 NA19002.hp1 NA19010.hp2 NA19012.hp2 NA19054.hp2 NA19060.hp2 NA19063.hp2 NA19066.hp2 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19079.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 others(4): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0019 a0001c0001t0020 a0001c0002t0003 a0001c0002t0004	a0001c0001t0003g0091 a0001c0001t0003g0135 a0001c0001t0003g0139 others(78): Show a0001c0001t0003g0091 a0001c0001t0003g0135 a0001c0001t0003g0139 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0145 a0001c0001t0003g0146 a0001c0001t0003g0148 a0001c0001t0003g0154 a0001c0001t0003g0156 a0001c0001t0003g0157 a0001c0001t0003g0159 a0001c0001t0003g0160 a0001c0001t0003g0162 a0001c0001t0003g0164 a0001c0001t0003g0182 a0001c0001t0003g0187 a0001c0001t0004g0007 a0001c0001t0004g0136 a0001c0001t0004g0137 a0001c0001t0004g0141 a0001c0001t0004g0144 a0001c0001t0004g0158 a0001c0001t0004g0165 a0001c0001t0004g0166 a0001c0001t0008g0150 a0001c0001t0008g0163 a0001c0001t0008g0184 a0001c0001t0019g0155 a0001c0001t0020g0161 a0001c0002t0003g0189 a0001c0002t0003g0193 a0001c0002t0003g0194 a0001c0002t0003g0195 a0001c0002t0003g0197 a0001c0002t0003g0205 a0001c0002t0003g0206 a0001c0002t0003g0207 a0001c0002t0003g0208 a0001c0002t0003g0209 a0001c0002t0003g0210 a0001c0002t0003g0213 a0001c0002t0003g0214 a0001c0002t0003g0220 a0001c0002t0003g0221 a0001c0002t0003g0222 a0001c0002t0003g0223 a0001c0002t0003g0224 a0001c0002t0003g0225 a0001c0002t0003g0226 a0001c0002t0003g0227 a0001c0002t0003g0228 a0001c0002t0003g0229 a0001c0002t0003g0230 a0001c0002t0003g0231 a0001c0002t0003g0232 a0001c0002t0003g0233 a0001c0002t0003g0234 a0001c0002t0003g0235 a0001c0002t0003g0237 a0001c0002t0003g0238 a0001c0002t0003g0239 a0001c0002t0003g0240 a0001c0002t0003g0241 a0001c0002t0003g0242 a0001c0002t0003g0243 a0001c0002t0003g0244 a0001c0002t0003g0245 a0001c0002t0003g0246 a0001c0002t0003g0247 a0001c0002t0003g0252 a0001c0002t0003g0256 a0001c0002t0003g0257 a0001c0002t0003g0258 a0001c0002t0003g0259 a0001c0002t0003g0261 a0001c0002t0003g0264 a0001c0002t0003g0266 a0001c0002t0003g0271 a0001c0002t0003g0272 a0001c0002t0004g0236	81	292	0.2774	0	c.12 others(5): Show c.1261A>G	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	1261		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428465	G G	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0024 a0001c0005t0024	a0001c0005t0024g0113 a0001c0005t0024g0113	1	292	0.0034	0	c.14 others(5): Show c.1420G>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	1420		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129428733	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03579.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0152 a0001c0001t0026g0152	1	292	0.0034	0	c.16 others(5): Show c.1688C>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	1688		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429060	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01891.hp1 NA20129.hp1 HG01891.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0283 a0001c0001t0018g0284 a0001c0001t0018g0283 a0001c0001t0018g0284	2	292	0.0069	0	c.20 others(5): Show c.2015C>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2015		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429079	G G	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01123.hp2 HG02273.hp2 HG04115.hp1 HG01123.hp2 HG02273.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0033 a0001c0001t0011g0290 a0001c0001t0011g0291 a0001c0001t0011g0033 a0001c0001t0011g0290 a0001c0001t0011g0291	3	292	0.0103	0	c.20 others(5): Show c.2034G>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2034		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429137	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00323.hp1 others(121): Show HG00099.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00558.hp2 HG00735.hp1 HG00738.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01123.hp1 HG01168.hp1 HG01168.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01952.hp2 HG01993.hp1 HG02055.hp1 HG02074.hp1 HG02109.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02293.hp2 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02602.hp2 HG02615.hp1 HG02647.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03041.hp2 HG03139.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03490.hp2 HG03491.hp1 HG03579.hp1 HG03579.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG03927.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18747.hp1 NA18906.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp2 NA18952.hp2 NA18955.hp1 NA18959.hp2 NA18962.hp2 NA18970.hp1 NA18972.hp1 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp1 NA18980.hp1 NA18985.hp2 NA18987.hp2 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA19002.hp2 NA19009.hp1 NA19010.hp1 NA19012.hp1 NA19043.hp2 NA19054.hp1 NA19060.hp1 NA19063.hp1 NA19066.hp1 NA19077.hp2 NA19079.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0003c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(14): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0021 a0001c0001t0022 a0001c0001t0025 a0001c0001t0026 a0001c0002t0001 a0001c0002t0004 a0001c0005t0024 a0003c0004t0001	a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0013 others(121): Show a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0041 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0052 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0065 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0130 a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0001g0147 a0001c0001t0001g0149 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0186 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0292 a0001c0001t0004g0007 a0001c0001t0004g0136 a0001c0001t0004g0137 a0001c0001t0004g0141 a0001c0001t0004g0144 a0001c0001t0004g0158 a0001c0001t0004g0165 a0001c0001t0004g0166 a0001c0001t0005g0051 a0001c0001t0005g0059 a0001c0001t0005g0060 a0001c0001t0005g0061 a0001c0001t0005g0062 a0001c0001t0005g0063 a0001c0001t0005g0064 a0001c0001t0008g0150 a0001c0001t0008g0163 a0001c0001t0008g0184 a0001c0001t0009g0089 a0001c0001t0009g0090 a0001c0001t0009g0099 a0001c0001t0012g0114 a0001c0001t0012g0120 a0001c0001t0012g0131 a0001c0001t0013g0118 a0001c0001t0013g0119 a0001c0001t0014g0067 a0001c0001t0014g0068 a0001c0001t0015g0077 a0001c0001t0015g0078 a0001c0001t0021g0092 a0001c0001t0022g0050 a0001c0001t0025g0082 a0001c0001t0026g0152 a0001c0002t0001g0190 a0001c0002t0001g0196 a0001c0002t0001g0203 a0001c0002t0001g0250 a0001c0002t0001g0263 a0001c0002t0001g0265 a0001c0002t0001g0267 a0001c0002t0001g0269 a0001c0002t0001g0270 a0001c0002t0004g0236 a0001c0005t0024g0113 a0003c0004t0001g0042	124	292	0.4247	0	c.20 others(5): Show c.2092G>A	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2092		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429175	A A	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01099.hp1 HG02559.hp2 HG02615.hp2 others(2): Show HG01099.hp1 HG02559.hp2 HG02615.hp2 HG03098.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0027 a0001c0001t0007 a0001c0001t0027	a0001c0001t0007g0285 a0001c0001t0007g0286 a0001c0001t0007g0287 others(2): Show a0001c0001t0007g0285 a0001c0001t0007g0286 a0001c0001t0007g0287 a0001c0001t0007g0288 a0001c0001t0027g0045	5	292	0.0171	0	c.21 others(5): Show c.2130A>C	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2130		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429212	A A	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02258.hp1 HG02622.hp1 HG02630.hp1 others(3): Show HG02258.hp1 HG02622.hp1 HG02630.hp1 HG02809.hp1 HG03453.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 others(1): Show a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0002t0017	a0001c0001t0014g0067 a0001c0001t0014g0068 a0001c0001t0015g0077 others(3): Show a0001c0001t0014g0067 a0001c0001t0014g0068 a0001c0001t0015g0077 a0001c0001t0015g0078 a0001c0001t0017g0066 a0001c0002t0017g0253	6	292	0.0206	0	c.21 others(5): Show c.2167A>C	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2167		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429348	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02486.hp1 HG02572.hp2 HG02717.hp2 others(4): Show HG02486.hp1 HG02572.hp2 HG02717.hp2 HG02809.hp2 HG03098.hp2 HG03139.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0026 a0001c0002t0006 a0001c0001t0006 a0001c0001t0026 a0001c0002t0006	a0001c0001t0006g0116 a0001c0001t0006g0117 a0001c0001t0006g0126 others(4): Show a0001c0001t0006g0116 a0001c0001t0006g0117 a0001c0001t0006g0126 a0001c0001t0006g0127 a0001c0001t0006g0128 a0001c0001t0026g0152 a0001c0002t0006g0219	7	292	0.0240	0	c.23 others(5): Show c.2303C>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2303		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429870	G G	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00673.hp2 NA18974.hp1 NA18977.hp1 others(1): Show HG00673.hp2 NA18974.hp1 NA18977.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0019 a0001c0001t0008 a0001c0001t0019	a0001c0001t0008g0150 a0001c0001t0008g0163 a0001c0001t0008g0184 others(1): Show a0001c0001t0008g0150 a0001c0001t0008g0163 a0001c0001t0008g0184 a0001c0001t0019g0155	4	292	0.0137	0	c.28 others(5): Show c.2825G>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2825		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129429959	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03139.hp1 HG03453.hp1 HG03139.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0118 a0001c0001t0013g0119 a0001c0001t0013g0118 a0001c0001t0013g0119	2	292	0.0069	0	c.29 others(5): Show c.2914C>T	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2914		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129430011	C C	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0050 a0001c0001t0022g0050	1	292	0.0034	0	c.29 others(5): Show c.2966C>G	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2966		chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129430020	C C	CAT CAT	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01123.hp1 HG01496.hp2 HG02055.hp1 others(7): Show HG01123.hp1 HG01496.hp2 HG02055.hp1 HG02723.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG03139.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 others(3): Show a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0001t0021 a0001c0001t0023 a0001c0005t0024	a0001c0001t0012g0114 a0001c0001t0012g0120 a0001c0001t0012g0131 others(7): Show a0001c0001t0012g0114 a0001c0001t0012g0120 a0001c0001t0012g0131 a0001c0001t0013g0118 a0001c0001t0013g0119 a0001c0001t0016g0121 a0001c0001t0016g0132 a0001c0001t0021g0092 a0001c0001t0023g0095 a0001c0005t0024g0113	10	292	0.0343	2	c.29 others(13): Show c.2990_*2991dupAT	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2992	INFO_REALIGN_3_PRIME	chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129430020	CAT CAT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02257.hp1 HG02451.hp2 HG02809.hp1 others(7): Show HG02257.hp1 HG02451.hp2 HG02809.hp1 HG02886.hp1 HG02970.hp2 HG03098.hp1 HG06807.hp2 NA19043.hp2 NA19240.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0015 a0001c0001t0027 a0001c0001t0005 a0001c0001t0015 a0001c0001t0027	a0001c0001t0005g0051 a0001c0001t0005g0059 a0001c0001t0005g0060 others(7): Show a0001c0001t0005g0051 a0001c0001t0005g0059 a0001c0001t0005g0060 a0001c0001t0005g0061 a0001c0001t0005g0062 a0001c0001t0005g0063 a0001c0001t0005g0064 a0001c0001t0015g0077 a0001c0001t0015g0078 a0001c0001t0027g0045	10	292	0.0343	-2	c.29 others(13): Show c.2990_*2991delAT	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2990	INFO_REALIGN_3_PRIME	chr7	TogoVar
AHCYL2_chr7_129220030_129435211	129430037	C C	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01496.hp2 HG02055.hp1 HG02886.hp2 others(5): Show HG01496.hp2 HG02055.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG03139.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 others(1): Show a0001c0001t0012 a0001c0001t0013 a0001c0001t0016 a0001c0005t0024	a0001c0001t0012g0114 a0001c0001t0012g0120 a0001c0001t0012g0131 others(5): Show a0001c0001t0012g0114 a0001c0001t0012g0120 a0001c0001t0012g0131 a0001c0001t0013g0118 a0001c0001t0013g0119 a0001c0001t0016g0121 a0001c0001t0016g0132 a0001c0005t0024g0113	8	292	0.0274	0	c.29 others(5): Show c.2992C>A	AHCYL2	ENSG00000158467.17	transcript	ENST00000325006.8	protein_coding	17/17	2992		chr7	TogoVar
AHCY_chr20_34275268_34308355	34280282	A A	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0129 a0001c0001t0006g0129	1	300	0.0033	0	c.75 others(4): Show c.752T>C	AHCY	ENSG00000101444.13	transcript	ENST00000217426.7	protein_coding	10/10	752		chr20	TogoVar
AHCY_chr20_34275268_34308355	34280355	T T	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00738.hp2 HG01169.hp1 HG01243.hp1 others(26): Show HG00738.hp2 HG01169.hp1 HG01243.hp1 HG01261.hp1 HG01884.hp1 HG02109.hp1 HG02145.hp1 HG02280.hp1 HG02486.hp1 HG02630.hp1 HG02647.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 NA18906.hp1 NA19030.hp1 NA19043.hp1 NA19240.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0009 a0001c0001t0002 a0001c0001t0007 a0001c0001t0009	a0001c0001t0002g0004 a0001c0001t0002g0021 a0001c0001t0002g0037 others(14): Show a0001c0001t0002g0004 a0001c0001t0002g0021 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0165 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0007g0175 a0001c0001t0009g0183	29	300	0.0967	0	c.67 others(4): Show c.679A>T	AHCY	ENSG00000101444.13	transcript	ENST00000217426.7	protein_coding	10/10	679		chr20	TogoVar
AHCY_chr20_34275268_34308355	34280451	C C	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0155 a0001c0001t0005g0155	1	300	0.0033	0	c.58 others(4): Show c.583G>C	AHCY	ENSG00000101444.13	transcript	ENST00000217426.7	protein_coding	10/10	583		chr20	TogoVar
AHCY_chr20_34275268_34308355	34280733	A A	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00741.hp1 HG01884.hp2 HG02622.hp2 others(4): Show HG00741.hp1 HG01884.hp2 HG02622.hp2 HG02886.hp2 HG03195.hp2 NA19030.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0072 a0001c0001t0003g0074 a0001c0001t0003g0075 others(4): Show a0001c0001t0003g0072 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0156 a0001c0001t0003g0182	7	300	0.0233	0	c.30 others(4): Show c.301T>G	AHCY	ENSG00000101444.13	transcript	ENST00000217426.7	protein_coding	10/10	301		chr20	TogoVar
AHCY_chr20_34275268_34308355	34280846	T T	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0175 a0001c0001t0007g0175	1	300	0.0033	0	c.18 others(4): Show c.188A>C	AHCY	ENSG00000101444.13	transcript	ENST00000217426.7	protein_coding	10/10	188		chr20	TogoVar
AHCY_chr20_34275268_34308355	34280890	G G	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0082 a0001c0001t0008g0082	1	300	0.0033	0	c.14 others(4): Show c.144C>T	AHCY	ENSG00000101444.13	transcript	ENST00000217426.7	protein_coding	10/10	144		chr20	TogoVar
AHCY_chr20_34275268_34308355	34281020	C C	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0004 a0003c0003t0004	a0003c0003t0004g0118 a0003c0003t0004g0118	1	300	0.0033	0	c.14 others(3): Show c.14G>A	AHCY	ENSG00000101444.13	transcript	ENST00000217426.7	protein_coding	10/10	14		chr20	TogoVar
AHDC1_chr1_27529245_27609144	27534248	GT GT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00639.hp2 HG01891.hp2 HG02258.hp2 others(8): Show HG00639.hp2 HG01891.hp2 HG02258.hp2 HG02602.hp1 HG02622.hp1 HG02647.hp1 HG02809.hp1 HG03453.hp2 HG03471.hp2 HG03579.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0003 a0001c0008t0003 a0001c0001t0003 a0001c0008t0003	a0001c0001t0003g0007 a0001c0001t0003g0069 a0001c0001t0003g0070 others(7): Show a0001c0001t0003g0007 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0088 a0001c0001t0003g0089 a0001c0001t0003g0110 a0001c0001t0003g0164 a0001c0008t0003g0020	11	180	0.0611	-1	c.71 others(5): Show c.711delA	AHDC1	ENSG00000126705.15	transcript	ENST00000673934.1	protein_coding	9/9	13055		chr1	TogoVar
AHDC1_chr1_27529245_27609144	27534250	TTTTTTTT others(4): Show TTTTTTTTTTTG	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01433.hp1 HG02273.hp2 HG03491.hp1 others(7): Show HG01433.hp1 HG02273.hp2 HG03491.hp1 HG03492.hp1 HG03688.hp2 HG03831.hp1 HG04199.hp1 NA18941.hp1 NA18954.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0021 a0001c0001 a0001c0021	a0001c0001t0004 a0001c0021t0004 a0001c0001t0004 a0001c0021t0004	a0001c0001t0004g0002 a0001c0001t0004g0030 a0001c0001t0004g0041 others(6): Show a0001c0001t0004g0002 a0001c0001t0004g0030 a0001c0001t0004g0041 a0001c0001t0004g0047 a0001c0001t0004g0116 a0001c0001t0004g0129 a0001c0001t0004g0135 a0001c0001t0004g0156 a0001c0021t0004g0084	10	180	0.0556	-11	c.69 others(20): Show c.699_*709delCAAAAAAAAAA	AHDC1	ENSG00000126705.15	transcript	ENST00000673934.1	protein_coding	9/9	13043		chr1	TogoVar
AHDC1_chr1_27529245_27609144	27534258	T T	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0118 a0001c0002t0012g0118	1	180	0.0056	0	c.70 others(4): Show c.702A>C	AHDC1	ENSG00000126705.15	transcript	ENST00000673934.1	protein_coding	9/9	13046		chr1	TogoVar
AHDC1_chr1_27529245_27609144	27534259	T T	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00642.hp1 HG01074.hp2 NA20805.hp2 HG00642.hp1 HG01074.hp2 NA20805.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0008 a0001c0006t0008	a0001c0006t0008g0051 a0001c0006t0008g0067 a0001c0006t0008g0147 a0001c0006t0008g0051 a0001c0006t0008g0067 a0001c0006t0008g0147	3	180	0.0167	0	c.70 others(4): Show c.701A>C	AHDC1	ENSG00000126705.15	transcript	ENST00000673934.1	protein_coding	9/9	13045		chr1	TogoVar

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