regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GALNT6_chr12_51346252_51396406 | 51360845 | A | G | splice_region_variant others(1): Show |
LOW | HG00099.hp2 HG00323.hp1 HG00423.hp1 others(191): Show |
a0001a0006a0007others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(49): Show | a0001c0001t0003g0336a0001c0001t0004g0006a0001c0001t0004g0060others(187): Show | 194 | 428 | 0.4533 | 0 | c.105 others(6): Show |
GALNT6 | ENSG00000139629.16 | transcript | ENST00000356317.8 | protein_coding | 6/11 | chr12 | TogoVar | ||||||
GALNT6_chr12_51346252_51396406 | 51379284 | T | C | splice_region_variant others(1): Show |
LOW | HG01243.hp2 | a0001 | a0001c0001 | a0001c0001t0081 | a0001c0001t0081g0255 | 1 | 428 | 0.0023 | 0 | c.491 others(5): Show |
GALNT6 | ENSG00000139629.16 | transcript | ENST00000356317.8 | protein_coding | 3/11 | chr12 | TogoVar | ||||||
GALNT7_chr4_173163811_173328967 | 173303996 | A | T | missense_variant others(1): Show |
MODERATE | NA18948.hp2 | a0005 | a0005c0009 | a0005c0009t0001 | a0005c0009t0001g0139 | 1 | 266 | 0.0038 | 0 | c.126 others(4): Show |
p.Ile others(6): Show |
GALNT7 | ENSG00000109586.12 | transcript | ENST00000265000.9 | protein_coding | 8/12 | 1292/4249 | 1267/1974 | 423/657 | chr4 | TogoVar | ||
GALNT7_chr4_173163811_173328967 | 173313951 | T | A | splice_region_variant others(1): Show |
LOW | HG03130.hp1 NA18906.hp1 |
a0002 | a0002c0007 | a0002c0007t0007 | a0002c0007t0007g0177a0002c0007t0007g0178 | 2 | 266 | 0.0075 | 0 | c.139 others(6): Show |
GALNT7 | ENSG00000109586.12 | transcript | ENST00000265000.9 | protein_coding | 8/11 | chr4 | TogoVar | ||||||
GALNT8_chr12_4715400_4777726 | 4744698 | G | A | splice_region_variant others(1): Show |
LOW | HG02717.hp1 | a0001 | a0001c0022 | a0001c0022t0002 | a0001c0022t0002g0251 | 1 | 338 | 0.0030 | 0 | c.858 others(3): Show |
p.Gly others(6): Show |
GALNT8 | ENSG00000130035.9 | transcript | ENST00000252318.7 | protein_coding | 4/11 | 1136/2321 | 858/1914 | 286/637 | chr12 | TogoVar | ||
GALNT8_chr12_4715400_4777726 | 4765352 | CT | C | splice_region_variant others(1): Show |
LOW | HG00323.hp1 HG00544.hp1 HG00544.hp2 others(190): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0014a0001c0022others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0004a0001c0001t0001g0009a0001c0001t0001g0010others(173): Show | 193 | 338 | 0.5710 | -1 | c.159 others(7): Show |
GALNT8 | ENSG00000130035.9 | transcript | ENST00000252318.7 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
GALNT8_chr12_4715400_4777726 | 4765352 | CTT | C | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00558.hp2 HG00609.hp1 others(119): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0002c0018others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0016a0001c0001t0001g0023a0001c0001t0001g0030others(98): Show | 122 | 338 | 0.3610 | -2 | c.159 others(15): Show |
GALNT8 | ENSG00000130035.9 | transcript | ENST00000252318.7 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
GALNT8_chr12_4715400_4777726 | 4765352 | CTTT | C | splice_region_variant others(1): Show |
LOW | HG00323.hp2 HG01943.hp2 HG02258.hp2 others(8): Show |
a0001a0002a0009others(1): Show | a0001c0001a0002c0002a0009c0013others(1): Show | a0001c0001t0001a0002c0002t0002a0002c0002t0007others(2): Show | a0001c0001t0001g0061a0002c0002t0002g0105a0002c0002t0002g0115others(8): Show | 11 | 338 | 0.0325 | -3 | c.159 others(16): Show |
GALNT8 | ENSG00000130035.9 | transcript | ENST00000252318.7 | protein_coding | 9/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
GALNT8_chr12_4715400_4777726 | 4765376 | T | A | splice_region_variant others(1): Show |
LOW | HG01884.hp1 HG03225.hp1 |
a0012a0020 | a0012c0017a0020c0024 | a0012c0017t0002a0020c0024t0002 | a0012c0017t0002g0123a0020c0024t0002g0292 | 2 | 338 | 0.0059 | 0 | c.159 others(6): Show |
GALNT8 | ENSG00000130035.9 | transcript | ENST00000252318.7 | protein_coding | 9/10 | chr12 | TogoVar | ||||||
GALNT9_chr12_132191372_132334589 | 132203685 | CCACACCT others(62): Show |
C | frameshift_variant others(3): Show |
HIGH | NA19002.hp2 | a0003 | a0003c0033 | a0003c0033t0001 | a0003c0033t0001g0114 | 1 | 183 | 0.0055 | -69 | c.107 others(81): Show |
p.Val others(5): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 7/11 | 1468/2933 | 1078/1812 | 360/603 | chr12 | TogoVar | ||
GALNT9_chr12_132191372_132334589 | 132247902 | G | A | splice_region_variant others(1): Show |
LOW | NA18971.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0076 | 1 | 183 | 0.0055 | 0 | c.107 others(6): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 6/10 | chr12 | TogoVar | ||||||
GALNT9_chr12_132191372_132334589 | 132286429 | G | C | splice_region_variant others(1): Show |
LOW | HG02698.hp1 HG03834.hp2 |
a0001 | a0001c0039a0001c0040 | a0001c0039t0006a0001c0040t0007 | a0001c0039t0006g0001a0001c0040t0007g0002 | 2 | 183 | 0.0109 | 0 | c.240 others(3): Show |
p.Gly others(5): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 2/11 | 626/2933 | 240/1812 | 80/603 | chr12 | TogoVar | ||
GALNTL5_chr7_151951446_152024929 | 151982978 | G | A | splice_region_variant others(1): Show |
LOW | HG02027.hp1 | a0003 | a0003c0003 | a0003c0003t0002 | a0003c0003t0002g0112 | 1 | 384 | 0.0026 | 0 | c.369 others(5): Show |
GALNTL5 | ENSG00000106648.15 | transcript | ENST00000392800.7 | protein_coding | 3/8 | chr7 | TogoVar | ||||||
GALNTL5_chr7_151951446_152024929 | 151982987 | T | C | missense_variant others(1): Show |
MODERATE | HG00140.hp1 HG00323.hp1 HG00423.hp2 others(291): Show |
a0001a0002a0004others(7): Show | a0001c0001a0002c0002a0002c0019others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(14): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(289): Show | 294 | 384 | 0.7656 | 0 | c.370 others(3): Show |
p.Cys others(6): Show |
GALNTL5 | ENSG00000106648.15 | transcript | ENST00000392800.7 | protein_coding | 4/9 | 573/1663 | 370/1332 | 124/443 | chr7 | TogoVar | ||
GALNTL5_chr7_151951446_152024929 | 151983158 | A | T | splice_region_variant others(1): Show |
LOW | HG00438.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0237 | 1 | 384 | 0.0026 | 0 | c.535 others(5): Show |
GALNTL5 | ENSG00000106648.15 | transcript | ENST00000392800.7 | protein_coding | 4/8 | chr7 | TogoVar | ||||||
GALNTL5_chr7_151951446_152024929 | 151987161 | G | T | missense_variant others(1): Show |
MODERATE | HG01169.hp2 HG01175.hp2 HG02145.hp2 others(5): Show |
a0007a0012 | a0007c0007a0012c0018 | a0007c0007t0001a0007c0007t0003a0012c0018t0002 | a0007c0007t0001g0218a0007c0007t0003g0339a0007c0007t0003g0340others(5): Show | 8 | 384 | 0.0208 | 0 | c.538 others(3): Show |
p.Asp others(6): Show |
GALNTL5 | ENSG00000106648.15 | transcript | ENST00000392800.7 | protein_coding | 5/9 | 741/1663 | 538/1332 | 180/443 | chr7 | TogoVar | ||
GALP_chr19_56171008_56190775 | 56176048 | GCCAGCTG others(43): Show |
G | splice_donor_variant others(3): Show |
HIGH | NA18972.hp2 | a0001 | a0001c0002 | a0001c0002t0030 | a0001c0002t0030g0042 | 1 | 444 | 0.0023 | -50 | c.-44 others(60): Show |
GALP | ENSG00000197487.9 | transcript | ENST00000357330.7 | protein_coding | 1/6 | 1002 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||
GALP_chr19_56171008_56190775 | 56177201 | G | A | splice_region_variant others(1): Show |
LOW | HG00423.hp1 HG00558.hp1 HG00609.hp1 others(83): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0065a0001c0001t0001g0138a0001c0001t0001g0282others(73): Show | 86 | 444 | 0.1937 | 0 | c.87+ others(4): Show |
GALP | ENSG00000197487.9 | transcript | ENST00000357330.7 | protein_coding | 2/5 | chr19 | TogoVar | ||||||
GALP_chr19_56171008_56190775 | 56182251 | C | G | missense_variant others(1): Show |
MODERATE | HG00099.hp1 HG00099.hp2 HG00408.hp2 others(115): Show |
a0002a0005 | a0002c0003a0005c0006 | a0002c0003t0001a0002c0003t0002a0002c0003t0003others(10): Show | a0002c0003t0001g0001a0002c0003t0001g0004a0002c0003t0001g0008others(92): Show | 118 | 444 | 0.2658 | 0 | c.216 others(3): Show |
p.Ile others(5): Show |
GALP | ENSG00000197487.9 | transcript | ENST00000357330.7 | protein_coding | 4/6 | 310/950 | 216/351 | 72/116 | chr19 | TogoVar | ||
GALP_chr19_56171008_56190775 | 56183136 | C | T | splice_region_variant others(1): Show |
LOW | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(135): Show |
a0001a0006 | a0001c0002a0006c0007 | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(16): Show | a0001c0002t0001g0002a0001c0002t0001g0006a0001c0002t0001g0009others(118): Show | 138 | 444 | 0.3108 | 0 | c.219 others(3): Show |
p.Asp others(5): Show |
GALP | ENSG00000197487.9 | transcript | ENST00000357330.7 | protein_coding | 5/6 | 313/950 | 219/351 | 73/116 | chr19 | TogoVar | ||
GALR1_chr18_77244848_77282900 | 77256158 | G | T | missense_variant others(1): Show |
MODERATE | HG02145.hp2 | a0005 | a0005c0013 | a0005c0013t0100 | a0005c0013t0100g0068 | 1 | 366 | 0.0027 | 0 | c.667 others(3): Show |
p.Val others(6): Show |
GALR1 | ENSG00000166573.6 | transcript | ENST00000299727.5 | protein_coding | 2/3 | 1368/10749 | 667/1050 | 223/349 | chr18 | TogoVar | ||
GAMT_chr19_1392026_1406542 | 1397505 | C | T | splice_region_variant others(1): Show |
LOW | HG00408.hp1 HG00408.hp2 HG00423.hp2 others(55): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0016a0001c0001t0001g0019others(1): Show | 58 | 402 | 0.1443 | 0 | c.571 others(5): Show |
GAMT | ENSG00000130005.13 | transcript | ENST00000252288.8 | protein_coding | 5/5 | chr19 | TogoVar | ||||||
GAMT_chr19_1392026_1406542 | 1399202 | G | A | splice_region_variant others(1): Show |
LOW | HG03209.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0052 | 1 | 402 | 0.0025 | 0 | c.392 others(5): Show |
GAMT | ENSG00000130005.13 | transcript | ENST00000252288.8 | protein_coding | 3/5 | chr19 | TogoVar | ||||||
GAMT_chr19_1392026_1406542 | 1399938 | C | T | missense_variant others(1): Show |
MODERATE | NA18956.hp1 NA19000.hp2 NA19004.hp1 others(2): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0011 | 5 | 402 | 0.0124 | 0 | c.182 others(3): Show |
p.Gly others(5): Show |
GAMT | ENSG00000130005.13 | transcript | ENST00000252288.8 | protein_coding | 2/6 | 248/1110 | 182/711 | 61/236 | chr19 | TogoVar | ||
GANC_chr15_42268201_42358666 | 42276349 | C | G | missense_variant others(1): Show |
MODERATE | HG00438.hp1 HG00438.hp2 HG00558.hp1 others(232): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0018a0002c0002others(21): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0014others(31): Show | a0001c0001t0001g0007a0001c0001t0001g0008a0001c0001t0001g0138others(222): Show | 235 | 262 | 0.8970 | 0 | c.31C others(2): Show |
p.Leu others(5): Show |
GANC | ENSG00000214013.10 | transcript | ENST00000318010.13 | protein_coding | 2/24 | 1312/5553 | 31/2745 | 11/914 | chr15 | TogoVar | ||
GANC_chr15_42268201_42358666 | 42348104 | T | A | missense_variant others(1): Show |
MODERATE | HG00558.hp2 HG02056.hp1 HG02135.hp1 others(14): Show |
a0004 | a0004c0004 | a0004c0004t0003 | a0004c0004t0003g0017a0004c0004t0003g0018a0004c0004t0003g0021others(14): Show | 17 | 262 | 0.0649 | 0 | c.230 others(4): Show |
p.Ile others(6): Show |
GANC | ENSG00000214013.10 | transcript | ENST00000318010.13 | protein_coding | 21/24 | 3587/5553 | 2306/2745 | 769/914 | chr15 | TogoVar | ||
GANC_chr15_42268201_42358666 | 42351331 | T | C | missense_variant others(1): Show |
MODERATE | HG00558.hp2 HG00621.hp1 HG00639.hp2 others(144): Show |
a0002a0003a0004others(9): Show | a0002c0002a0002c0021a0002c0022others(18): Show | a0002c0002t0002a0002c0002t0007a0002c0002t0008others(24): Show | a0002c0002t0002g0001a0002c0002t0002g0002a0002c0002t0002g0004others(136): Show | 147 | 262 | 0.5611 | 0 | c.253 others(4): Show |
p.Phe others(6): Show |
GANC | ENSG00000214013.10 | transcript | ENST00000318010.13 | protein_coding | 23/24 | 3815/5553 | 2534/2745 | 845/914 | chr15 | TogoVar | ||
GAN_chr16_81309962_81395809 | 81364976 | C | T | splice_region_variant others(1): Show |
LOW | NA19240.hp2 | a0001 | a0001c0007 | a0001c0007t0014 | a0001c0007t0014g0357 | 1 | 384 | 0.0026 | 0 | c.123 others(4): Show |
p.Ile others(6): Show |
GAN | ENSG00000261609.8 | transcript | ENST00000648994.2 | protein_coding | 8/11 | 1391/15159 | 1239/1794 | 413/597 | chr16 | TogoVar | ||
GAN_chr16_81309962_81395809 | 81390809 | A | C | splice_region_variant | LOW | HG01943.hp2 | a0001 | a0001c0001 | a0001c0001t0173 | a0001c0001t0173g0180 | 1 | 384 | 0.0026 | 0 | c.*13 others(6): Show |
GAN | ENSG00000261609.8 | transcript | ENST00000648994.2 | protein_coding | 11/11 | chr16 | TogoVar | ||||||
GAPDHS_chr19_35528456_35550319 | 35536808 | C | T | splice_region_variant others(1): Show |
LOW | HG02109.hp1 HG02257.hp2 HG02486.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011a0001c0001t0001g0062a0001c0001t0001g0063 | 11 | 428 | 0.0257 | 0 | c.68- others(4): Show |
GAPDHS | ENSG00000105679.9 | transcript | ENST00000222286.9 | protein_coding | 1/10 | chr19 | TogoVar | ||||||
GAPDHS_chr19_35528456_35550319 | 35536810 | T | G | splice_region_variant others(1): Show |
LOW | HG00733.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0065 | 1 | 428 | 0.0023 | 0 | c.68- others(4): Show |
GAPDHS | ENSG00000105679.9 | transcript | ENST00000222286.9 | protein_coding | 1/10 | chr19 | TogoVar | ||||||
GAPDHS_chr19_35528456_35550319 | 35545318 | C | G | splice_region_variant | LOW | HG01928.hp2 HG01943.hp1 HG01975.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0028a0001c0001t0002g0083 | 3 | 428 | 0.0070 | 0 | c.*14 others(4): Show |
GAPDHS | ENSG00000105679.9 | transcript | ENST00000222286.9 | protein_coding | 11/11 | chr19 | TogoVar | ||||||
GAPDH_chr12_6529517_6543371 | 6534859 | C | T | splice_region_variant others(1): Show |
LOW | HG03486.hp2 | a0001 | a0001c0013 | a0001c0013t0002 | a0001c0013t0002g0020 | 1 | 456 | 0.0022 | 0 | c.27C others(2): Show |
p.Asn others(4): Show |
GAPDH | ENSG00000111640.15 | transcript | ENST00000229239.10 | protein_coding | 2/9 | 103/1285 | 27/1008 | 9/335 | chr12 | TogoVar | ||
GAPDH_chr12_6529517_6543371 | 6536489 | C | T | splice_region_variant others(1): Show |
LOW | HG04204.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0053 | 1 | 456 | 0.0022 | 0 | c.30- others(4): Show |
GAPDH | ENSG00000111640.15 | transcript | ENST00000229239.10 | protein_coding | 2/8 | chr12 | TogoVar | ||||||
GAPDH_chr12_6529517_6543371 | 6537577 | T | G | splice_region_variant others(1): Show |
LOW | HG02056.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0045 | 1 | 456 | 0.0022 | 0 | c.526 others(5): Show |
GAPDH | ENSG00000111640.15 | transcript | ENST00000229239.10 | protein_coding | 7/8 | chr12 | TogoVar | ||||||
GAPT_chr5_58486435_58502090 | 58491549 | A | G | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(100): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0029others(15): Show | 103 | 378 | 0.2725 | 0 | c.-41 others(6): Show |
GAPT | ENSG00000175857.9 | transcript | ENST00000502276.6 | protein_coding | 1/2 | chr5 | TogoVar | ||||||
GAPT_chr5_58486435_58502090 | 58493843 | TA | T | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(103): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0005a0001c0001t0001g0022a0001c0001t0001g0023others(14): Show | 106 | 378 | 0.2804 | -1 | c.-29 others(7): Show |
GAPT | ENSG00000175857.9 | transcript | ENST00000502276.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GAPVD1_chr9_125256826_125372207 | 125295429 | C | CT | splice_region_variant others(1): Show |
LOW | HG00544.hp1 HG00642.hp1 HG00673.hp1 others(11): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0002a0001c0001t0012a0001c0001t0029others(3): Show | a0001c0001t0002g0021a0001c0001t0002g0024a0001c0001t0002g0025others(11): Show | 14 | 340 | 0.0412 | 1 | c.-14 others(7): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
GAPVD1_chr9_125256826_125372207 | 125295429 | CT | C | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(180): Show |
a0001a0003a0006others(1): Show | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(23): Show | a0001c0001t0001g0176a0001c0001t0001g0177a0001c0001t0001g0178others(180): Show | 183 | 340 | 0.5382 | -1 | c.-14 others(7): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
GAPVD1_chr9_125256826_125372207 | 125295429 | CTTTTTTT others(5): Show |
C | splice_region_variant others(1): Show |
LOW | HG02615.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0204 | 1 | 340 | 0.0029 | -12 | c.-14 others(26): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
GAPVD1_chr9_125256826_125372207 | 125299114 | G | C | splice_region_variant others(1): Show |
LOW | HG00423.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0082 | 1 | 340 | 0.0029 | 0 | c.185 others(5): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 4/27 | chr9 | TogoVar | ||||||
GAPVD1_chr9_125256826_125372207 | 125301963 | CT | C | splice_region_variant others(1): Show |
LOW | HG01069.hp2 HG01167.hp1 HG01257.hp2 others(16): Show |
a0001 | a0001c0001a0001c0003a0001c0010 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(5): Show | a0001c0001t0001g0234a0001c0001t0002g0061a0001c0001t0002g0309others(16): Show | 19 | 340 | 0.0559 | -1 | c.186 others(6): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 4/27 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
GAPVD1_chr9_125256826_125372207 | 125331920 | A | G | splice_region_variant others(1): Show |
LOW | HG03491.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0117 | 1 | 340 | 0.0029 | 0 | c.217 others(6): Show |
GAPVD1 | ENSG00000165219.23 | transcript | ENST00000297933.11 | protein_coding | 13/27 | chr9 | TogoVar | ||||||
GAR1_chr4_109810762_109829737 | 109816137 | G | GT | splice_region_variant others(1): Show |
LOW | HG01109.hp1 HG02486.hp1 HG02559.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0007a0001c0001t0001g0087a0001c0001t0002g0031others(2): Show | 14 | 426 | 0.0329 | 1 | c.-12 others(6): Show |
GAR1 | ENSG00000109534.17 | transcript | ENST00000226796.7 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
GAR1_chr4_109810762_109829737 | 109817929 | G | A | splice_region_variant others(1): Show |
LOW | HG00738.hp2 HG02886.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0032a0001c0002t0001g0032 | 2 | 426 | 0.0047 | 0 | c.215 others(5): Show |
GAR1 | ENSG00000109534.17 | transcript | ENST00000226796.7 | protein_coding | 2/6 | chr4 | TogoVar | ||||||
GAR1_chr4_109810762_109829737 | 109822487 | C | T | splice_region_variant others(1): Show |
LOW | HG02615.hp1 NA19043.hp1 |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0002a0001c0003t0001g0077 | 2 | 426 | 0.0047 | 0 | c.570 others(3): Show |
p.Gly others(6): Show |
GAR1 | ENSG00000109534.17 | transcript | ENST00000226796.7 | protein_coding | 5/7 | 625/1015 | 570/654 | 190/217 | chr4 | TogoVar | ||
GAREM2_chr2_26168088_26194663 | 26176345 | G | A | splice_region_variant others(1): Show |
LOW | HG00099.hp2 HG00140.hp2 HG00408.hp1 others(238): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0004a0001c0005others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(25): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(97): Show | 241 | 306 | 0.7876 | 0 | c.114 others(3): Show |
p.Gly others(5): Show |
GAREM2 | ENSG00000157833.13 | transcript | ENST00000401533.7 | protein_coding | 2/6 | 247/4164 | 114/2625 | 38/874 | chr2 | TogoVar | ||
GAREM2_chr2_26168088_26194663 | 26185282 | T | C | splice_region_variant others(1): Show |
LOW | HG03831.hp1 HG04199.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0042a0001c0001t0001g0043 | 2 | 306 | 0.0065 | 0 | c.142 others(6): Show |
GAREM2 | ENSG00000157833.13 | transcript | ENST00000401533.7 | protein_coding | 4/5 | chr2 | TogoVar | ||||||
GARIN2_chr14_67184440_67228940 | 67208204 | A | G | splice_region_variant others(1): Show |
LOW | HG00280.hp1 HG00621.hp1 HG01123.hp2 others(18): Show |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0033a0002c0003t0001g0034a0002c0003t0001g0084others(16): Show | 21 | 332 | 0.0633 | 0 | c.915 others(3): Show |
p.Glu others(6): Show |
GARIN2 | ENSG00000172717.17 | transcript | ENST00000696955.1 | protein_coding | 6/8 | 1158/1620 | 915/1254 | 305/417 | chr14 | TogoVar | ||
GARIN5B_chr19_55349908_55368260 | 55355100 | G | C | splice_region_variant others(1): Show |
LOW | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(145): Show |
a0001a0002a0007others(10): Show | a0001c0001a0001c0030a0002c0004others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0001a0001c0001t0001g0022a0001c0001t0001g0025others(44): Show | 148 | 356 | 0.4157 | 0 | c.*41 others(5): Show |
GARIN5B | ENSG00000180043.11 | transcript | ENST00000424985.3 | protein_coding | 10/10 | chr19 | TogoVar |