regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DUSP9_chrX_153642203_153656326 | 153650103 | A | AC | frameshift_variant | HIGH | NA18987.hp1 | a0005 | a0005c0009 | a0005c0009t0020 | a0005c0009t0020g0013 | 1 | 328 | 0.0031 | 1 | c.955 others(4): Show |
p.Leu others(5): Show |
DUSP9 | ENSG00000130829.18 | transcript | ENST00000342782.4 | protein_coding | 4/4 | 1214/2434 | 956/1155 | 319/384 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
DUSP9_chrX_153642203_153656326 | 153650211 | A | AG | frameshift_variant | HIGH | NA18987.hp1 | a0005 | a0005c0009 | a0005c0009t0020 | a0005c0009t0020g0013 | 1 | 328 | 0.0031 | 1 | c.106 others(5): Show |
p.Ser others(5): Show |
DUSP9 | ENSG00000130829.18 | transcript | ENST00000342782.4 | protein_coding | 4/4 | 1323/2434 | 1065/1155 | 355/384 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
DUSP9_chrX_153642203_153656326 | 153650218 | T | TG | frameshift_variant | HIGH | NA18987.hp1 | a0005 | a0005c0009 | a0005c0009t0020 | a0005c0009t0020g0013 | 1 | 328 | 0.0031 | 1 | c.107 others(5): Show |
p.Gln others(5): Show |
DUSP9 | ENSG00000130829.18 | transcript | ENST00000342782.4 | protein_coding | 4/4 | 1333/2434 | 1075/1155 | 359/384 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
E2F2_chr1_23501438_23536233 | 23530541 | C | A | splice_donor_variant others(1): Show |
HIGH | NA18987.hp1 | a0002 | a0002c0002 | a0002c0002t0016 | a0002c0002t0016g0032 | 1 | 396 | 0.0025 | 0 | c.252 others(5): Show |
E2F2 | ENSG00000007968.7 | transcript | ENST00000361729.3 | protein_coding | 1/6 | chr1 | TogoVar | ||||||
EBLN2_chr3_73056659_73068337 | 73062330 | C | CA | frameshift_variant | HIGH | HG00099.hp1 HG00423.hp2 HG00597.hp1 others(111): Show |
a0002a0005a0006 | a0002c0002a0002c0009a0005c0006others(1): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0009others(8): Show | a0002c0002t0002g0000a0002c0002t0003g0000a0002c0002t0009g0000others(8): Show | 114 | 428 | 0.2664 | 1 | c.250 others(4): Show |
p.Arg others(4): Show |
EBLN2 | ENSG00000255423.1 | transcript | ENST00000533473.1 | protein_coding | 1/1 | 674/1679 | 251/819 | 84/272 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
ECEL1_chr2_232474827_232492834 | 232487718 | C | G | splice_donor_variant others(1): Show |
HIGH | NA18987.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0127 | 1 | 438 | 0.0023 | 0 | c.-10 others(6): Show |
ECEL1 | ENSG00000171551.12 | transcript | ENST00000304546.6 | protein_coding | 1/17 | chr2 | TogoVar | ||||||
ENTR1_chr9_136396922_136415614 | 136410362 | C | CG | frameshift_variant | HIGH | HG00558.hp1 HG01496.hp2 HG01952.hp1 others(13): Show |
a0003 | a0003c0005a0003c0007a0003c0008others(3): Show | a0003c0005t0001a0003c0005t0016a0003c0007t0002others(4): Show | a0003c0005t0001g0081a0003c0005t0001g0082a0003c0005t0001g0083others(12): Show | 16 | 412 | 0.0388 | 1 | c.35d others(3): Show |
p.Leu others(4): Show |
ENTR1 | ENSG00000165689.17 | transcript | ENST00000357365.8 | protein_coding | 1/10 | 252/2391 | 35/1308 | 12/435 | chr9 | TogoVar | ||
ERV3-1_chr7_64985356_65011687 | 64992360 | G | A | stop_gained | HIGH | HG00140.hp1 HG00408.hp2 HG00558.hp2 others(60): Show |
a0003a0013 | a0003c0003a0013c0019 | a0003c0003t0001a0013c0019t0001 | a0003c0003t0001g0003a0003c0003t0001g0015a0003c0003t0001g0021others(12): Show | 63 | 458 | 0.1376 | 0 | c.667 others(3): Show |
p.Arg others(4): Show |
ERV3-1 | ENSG00000213462.5 | transcript | ENST00000394323.3 | protein_coding | 2/2 | 1202/3206 | 667/1815 | 223/604 | chr7 | TogoVar | ||
FOXD4L3_chr9_68297867_68310084 | 68303273 | A | T | stop_gained | HIGH | HG00423.hp1 HG00544.hp2 HG00621.hp1 others(81): Show |
a0001a0007 | a0001c0002a0001c0003a0001c0014others(2): Show | a0001c0002t0001a0001c0002t0003a0001c0003t0001others(3): Show | a0001c0002t0001g0000a0001c0002t0003g0000a0001c0003t0001g0000others(3): Show | 84 | 175 | 0.4800 | 0 | c.322 others(3): Show |
p.Lys others(4): Show |
FOXD4L3 | ENSG00000187559.6 | transcript | ENST00000342833.4 | protein_coding | 1/1 | 407/2218 | 322/1254 | 108/417 | chr9 | TogoVar | ||
FRS2_chr12_69465388_69584793 | 69571314 | TTTAACAT others(21): Show |
T | frameshift_variant | HIGH | NA18987.hp1 | a0003 | a0003c0003 | a0003c0003t0002 | a0003c0003t0002g0324 | 1 | 342 | 0.0029 | -28 | c.294 others(35): Show |
p.Phe others(4): Show |
FRS2 | ENSG00000166225.9 | transcript | ENST00000549921.6 | protein_coding | 7/9 | 697/6768 | 294/1527 | 98/508 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
FTHL17_chrX_31066233_31077041 | 31071512 | C | A | stop_gained | HIGH | HG00408.hp2 HG00544.hp2 HG02165.hp2 others(34): Show |
a0002a0004a0006 | a0002c0003a0002c0004a0004c0006others(1): Show | a0002c0003t0001a0002c0004t0001a0004c0006t0001others(1): Show | a0002c0003t0001g0000a0002c0004t0001g0000a0004c0006t0001g0000others(1): Show | 37 | 336 | 0.1101 | 0 | c.442 others(3): Show |
p.Glu others(4): Show |
FTHL17 | ENSG00000132446.7 | transcript | ENST00000359202.5 | protein_coding | 1/1 | 530/809 | 442/552 | 148/183 | chrX | TogoVar | ||
FZD8_chr10_35633247_35647296 | 35639499 | GGC | G | frameshift_variant | HIGH | HG02132.hp2 NA18954.hp2 NA18979.hp2 others(2): Show |
a0000 | a0000c0005 | a0000c0005t0001a0000c0005t0004 | a0000c0005t0001g0000a0000c0005t0004g0000 | 5 | 404 | 0.0124 | -2 | c.192 others(11): Show |
p.Pro others(5): Show |
FZD8 | ENSG00000177283.8 | transcript | ENST00000374694.3 | protein_coding | 1/1 | 2797/4050 | 1929/2085 | 643/694 | chr10 | TogoVar | ||
GDPD4_chr11_77211558_77306686 | 77243743 | T | TA | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(81): Show |
a0003a0004a0006others(1): Show | a0003c0003a0004c0004a0006c0006others(1): Show | a0003c0003t0001a0003c0003t0002a0003c0003t0003others(6): Show | a0003c0003t0001g0042a0003c0003t0001g0055a0003c0003t0001g0073others(79): Show | 84 | 350 | 0.2400 | 1 | c.119 others(5): Show |
p.Ile others(5): Show |
GDPD4 | ENSG00000178795.10 | transcript | ENST00000315938.5 | protein_coding | 13/17 | 1526/2617 | 1191/1563 | 397/520 | chr11 | TogoVar | ||
GDPD4_chr11_77211558_77306686 | 77268541 | T | G | splice_acceptor_variant others(1): Show |
HIGH | HG02132.hp2 NA18981.hp1 NA18987.hp1 |
a0003 | a0003c0003 | a0003c0003t0007 | a0003c0003t0007g0047a0003c0003t0007g0048a0003c0003t0007g0081 | 3 | 350 | 0.0086 | 0 | c.625 others(5): Show |
GDPD4 | ENSG00000178795.10 | transcript | ENST00000315938.5 | protein_coding | 9/16 | chr11 | TogoVar | ||||||
GIT1_chr17_29568475_29594648 | 29581382 | T | A | splice_acceptor_variant others(1): Show |
HIGH | NA18987.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0153 | 1 | 400 | 0.0025 | 0 | c.719 others(5): Show |
GIT1 | ENSG00000108262.16 | transcript | ENST00000225394.8 | protein_coding | 6/19 | chr17 | TogoVar | ||||||
GOLGA8S_chr15_23349748_23373341 | 23364403 | G | T | stop_gained | HIGH | HG00280.hp1 HG00438.hp1 HG00544.hp1 others(75): Show |
a0002a0013a0016others(17): Show | a0002c0002a0002c0086a0002c0087others(23): Show | a0002c0002t0001a0002c0002t0020a0002c0086t0001others(24): Show | a0002c0002t0001g0004a0002c0002t0001g0011a0002c0002t0001g0018others(61): Show | 78 | 430 | 0.1814 | 0 | c.144 others(4): Show |
p.Glu others(4): Show |
GOLGA8S | ENSG00000261739.3 | transcript | ENST00000562295.3 | protein_coding | 16/19 | 1509/5186 | 1447/1917 | 483/638 | chr15 | TogoVar | ||
GP1BA_chr17_4927277_4940023 | 4933871 | ACCCCGGA others(72): Show |
A | frameshift_variant | HIGH | NA18987.hp1 | a0015 | a0015c0017 | a0015c0017t0003 | a0015c0017t0003g0001 | 1 | 424 | 0.0024 | -79 | c.127 others(88): Show |
p.Pro others(5): Show |
GP1BA | ENSG00000185245.9 | transcript | ENST00000329125.6 | protein_coding | 2/2 | 1366/2514 | 1271/1959 | 424/652 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
GPR33_chr14_31477875_31493039 | 31483548 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(423): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0007others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(82): Show | 426 | 448 | 0.9509 | 0 | c.418 others(3): Show |
p.Arg others(4): Show |
GPR33 | ENSG00000214943.5 | transcript | ENST00000399285.5 | protein_coding | 2/2 | 567/1240 | 418/1002 | 140/333 | chr14 | TogoVar | ||
GSDMB_chr17_39899595_39923635 | 39908216 | T | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(122): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0004a0002c0002t0005 | a0002c0002t0001g0002a0002c0002t0001g0004a0002c0002t0001g0014others(47): Show | 125 | 400 | 0.3125 | 0 | c.662 others(5): Show |
GSDMB | ENSG00000073605.19 | transcript | ENST00000418519.6 | protein_coding | 5/10 | chr17 | TogoVar | ||||||
GYG2_chrX_2823930_2887818 | 2877241 | C | CT | frameshift_variant | HIGH | NA18987.hp1 | a0008 | a0008c0014 | a0008c0014t0018 | a0008c0014t0018g0147 | 1 | 316 | 0.0032 | 1 | c.118 others(5): Show |
p.Glu others(5): Show |
GYG2 | ENSG00000056998.21 | transcript | ENST00000398806.8 | protein_coding | 10/11 | 1362/3192 | 1188/1413 | 396/470 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
HCAR2_chr12_122696293_122708357 | 122702193 | TAAGGA | T | frameshift_variant others(1): Show |
HIGH | HG00597.hp1 HG00609.hp1 NA18747.hp1 others(2): Show |
a0000 | a0000c0004a0000c0006 | a0000c0004t0006a0000c0006t0006 | a0000c0004t0006g0000a0000c0006t0006g0000 | 5 | 428 | 0.0117 | -5 | c.108 others(14): Show |
p.Pro others(5): Show |
HCAR2 | ENSG00000182782.8 | transcript | ENST00000328880.6 | protein_coding | 1/1 | 1164/2065 | 1086/1092 | 362/363 | chr12 | TogoVar | ||
HLA-DPB1_chr6_33070990_33094696 | 33080689 | G | T | stop_gained | HIGH | HG00280.hp1 HG00323.hp1 HG00673.hp1 others(113): Show |
a0000a0006a0008others(10): Show | a0000c0009a0000c0012a0000c0018others(15): Show | a0000c0009t0006a0000c0009t0018a0000c0012t0006others(18): Show | a0000c0009t0006g0014a0000c0009t0006g0038a0000c0009t0006g0089others(31): Show | 116 | 455 | 0.2550 | 0 | c.118 others(3): Show |
p.Gly others(3): Show |
HLA-DPB1 | ENSG00000223865.11 | transcript | ENST00000418931.7 | protein_coding | 2/6 | 170/3991 | 118/777 | 40/258 | chr6 | TogoVar | ||
HOXC9_chr12_53995161_54008337 | 54000179 | C | CCCCGTTA others(4): Show |
frameshift_variant others(1): Show |
HIGH | NA18987.hp1 | a0001 | a0001c0002 | a0001c0002t0008 | a0001c0002t0008g0002 | 1 | 342 | 0.0029 | 11 | c.-9_ others(15): Show |
p.Met others(3): Show |
HOXC9 | ENSG00000180806.5 | transcript | ENST00000303450.5 | protein_coding | 1/2 | 31/1474 | 3/783 | 1/260 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
ICAM5_chr19_10284952_10301778 | 10293783 | C | CG | frameshift_variant | HIGH | HG00642.hp1 HG00642.hp2 HG00673.hp1 others(32): Show |
a0003a0004 | a0003c0005a0003c0008a0003c0012others(4): Show | a0003c0005t0001a0003c0008t0001a0003c0012t0001others(4): Show | a0003c0005t0001g0001a0003c0005t0001g0003a0003c0005t0001g0014others(13): Show | 35 | 432 | 0.0810 | 1 | c.155 others(5): Show |
p.Val others(5): Show |
ICAM5 | ENSG00000105376.5 | transcript | ENST00000221980.5 | protein_coding | 7/11 | 1648/3029 | 1556/2775 | 519/924 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |
IFNA10_chr9_21201181_21212143 | 21207038 | A | T | stop_gained | HIGH | HG00099.hp1 HG00323.hp1 HG00544.hp2 others(191): Show |
a0002 | a0002c0002a0002c0003a0002c0004others(9): Show | a0002c0002t0002a0002c0002t0012a0002c0002t0013others(13): Show | a0002c0002t0002g0000a0002c0002t0012g0000a0002c0002t0013g0000others(13): Show | 194 | 457 | 0.4245 | 0 | c.60T others(2): Show |
p.Cys others(3): Show |
IFNA10 | ENSG00000186803.3 | transcript | ENST00000357374.2 | protein_coding | 1/1 | 106/963 | 60/570 | 20/189 | chr9 | TogoVar | ||
IFNE_chr9_21475839_21487313 | 21481484 | G | A | stop_gained | HIGH | HG00438.hp2 HG00544.hp1 HG00558.hp1 others(58): Show |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0000 | 61 | 450 | 0.1356 | 0 | c.211 others(3): Show |
p.Gln others(3): Show |
IFNE | ENSG00000184995.7 | transcript | ENST00000448696.4 | protein_coding | 1/1 | 830/1475 | 211/627 | 71/208 | chr9 | TogoVar | ||
IRF2BP1_chr19_45878608_45891141 | 45884308 | A | AC | frameshift_variant | HIGH | HG00735.hp2 HG01099.hp1 HG01099.hp2 others(11): Show |
a0003a0004a0006others(1): Show | a0003c0007a0004c0008a0006c0016others(1): Show | a0003c0007t0001a0003c0007t0002a0004c0008t0001others(2): Show | a0003c0007t0001g0000a0003c0007t0002g0000a0004c0008t0001g0000others(2): Show | 14 | 416 | 0.0337 | 1 | c.146 others(5): Show |
p.Gly others(5): Show |
IRF2BP1 | ENSG00000170604.5 | transcript | ENST00000302165.5 | protein_coding | 1/1 | 1833/2534 | 1466/1755 | 489/584 | chr19 | TogoVar | ||
KCNV1_chr8_109958636_109980771 | 109974275 | C | CCCGAGCG others(39): Show |
frameshift_variant others(1): Show |
HIGH | NA18987.hp1 | a0002 | a0002c0004 | a0002c0004t0002 | a0002c0004t0002g0035 | 1 | 372 | 0.0027 | 46 | c.68_ others(52): Show |
p.Asp others(4): Show |
KCNV1 | ENSG00000164794.9 | transcript | ENST00000524391.6 | protein_coding | 2/4 | 1070/6912 | 113/1503 | 38/500 | chr8 | TogoVar | ||
KDM4A_chr1_43645149_43710518 | 43660291 | CA | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(188): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(169): Show | 191 | 370 | 0.5162 | -1 | c.315 others(6): Show |
KDM4A | ENSG00000066135.13 | transcript | ENST00000372396.4 | protein_coding | 3/21 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
KLF16_chr19_1847399_1868579 | 1854587 | C | CG | frameshift_variant | HIGH | HG00438.hp2 HG00735.hp2 HG01099.hp2 others(23): Show |
a0000 | a0000c0004a0000c0005a0000c0009 | a0000c0004t0002a0000c0004t0004a0000c0004t0005others(5): Show | a0000c0004t0002g0075a0000c0004t0002g0081a0000c0004t0002g0083others(22): Show | 26 | 398 | 0.0653 | 1 | c.630 others(4): Show |
p.Gly others(5): Show |
KLF16 | ENSG00000129911.9 | transcript | ENST00000250916.6 | protein_coding | 2/2 | 712/2901 | 630/759 | 210/252 | chr19 | TogoVar | ||
KLHDC7B_chr22_50540899_50556023 | 50547934 | CCCCAGCC others(64): Show |
C | frameshift_variant | HIGH | NA18987.hp1 | a0039 | a0039c0069 | a0039c0069t0001 | a0039c0069t0001g0000 | 1 | 432 | 0.0023 | -71 | c.169 others(80): Show |
p.Ala others(5): Show |
KLHDC7B | ENSG00000130487.9 | transcript | ENST00000648057.3 | protein_coding | 1/1 | 2040/5125 | 1695/3708 | 565/1235 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |
KRT24_chr17_40692991_40708752 | 40701882 | CA | C | frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(201): Show |
a0001a0010a0012 | a0001c0001a0001c0013a0001c0014others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0013t0001others(4): Show | a0001c0001t0001g0003a0001c0001t0001g0005a0001c0001t0001g0011others(54): Show | 204 | 424 | 0.4811 | -1 | c.666 others(4): Show |
p.Asn others(5): Show |
KRT24 | ENSG00000167916.5 | transcript | ENST00000264651.3 | protein_coding | 2/8 | 725/1883 | 666/1578 | 222/525 | chr17 | TogoVar | ||
KRT37_chr17_41415547_41429585 | 41422807 | G | A | stop_gained | HIGH | HG00408.hp2 HG00544.hp2 HG00609.hp1 others(99): Show |
a0002a0008 | a0002c0002a0002c0020a0008c0009 | a0002c0002t0002a0002c0020t0002a0008c0009t0002 | a0002c0002t0002g0002a0002c0002t0002g0013a0002c0002t0002g0036others(2): Show | 102 | 409 | 0.2494 | 0 | c.703 others(3): Show |
p.Gln others(4): Show |
KRT37 | ENSG00000108417.4 | transcript | ENST00000225550.4 | protein_coding | 3/7 | 765/1743 | 703/1350 | 235/449 | chr17 | TogoVar | ||
KRTAP19-6_chr21_30536535_30546864 | 30541662 | AG | A | frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(301): Show |
a0000 | a0000c0001a0000c0003a0000c0004others(2): Show | a0000c0001t0001a0000c0003t0001a0000c0004t0001others(2): Show | a0000c0001t0001g0000a0000c0003t0001g0000a0000c0004t0001g0000others(2): Show | 304 | 394 | 0.7716 | -1 | c.171 others(4): Show |
p.Tyr others(4): Show |
KRTAP19-6 | ENSG00000186925.6 | transcript | ENST00000334046.5 | protein_coding | 1/1 | 202/330 | 171/177 | 57/58 | chr21 | TogoVar | ||
KRTAP4-8_chr17_41091981_41103142 | 41098083 | A | AT | frameshift_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(233): Show |
a0001a0003a0007others(5): Show | a0001c0001a0003c0003a0003c0010others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0012others(12): Show | a0001c0001t0001g0000a0001c0001t0005g0000a0001c0001t0012g0000others(12): Show | 236 | 416 | 0.5673 | 1 | c.1du others(2): Show |
p.Met others(3): Show |
KRTAP4-8 | ENSG00000204880.9 | transcript | ENST00000333822.5 | protein_coding | 1/1 | 59/1162 | 1/558 | 1/185 | chr17 | TogoVar | ||
KRTAP9-6_chr17_41260378_41270860 | 41265463 | TGACCACC others(5390): Show |
T | frameshift_variant others(2): Show |
HIGH | NA18987.hp2 | a0000 | a0000c0006 | a0000c0006t0000 | a0000c0006t0000g0000 | 1 | 248 | 0.0040 | -5397 | c.87_ others(8): Show |
p.Val others(4): Show |
KRTAP9-6 | ENSG00000212659.2 | transcript | ENST00000391355.2 | protein_coding | 1/1 | 87/483 | 87/483 | 29/160 | chr17 | TogoVar | ||
LCE2B_chr1_152681123_152692397 | 152686157 | G | C | splice_donor_variant others(1): Show |
HIGH | NA18957.hp1 NA18974.hp1 NA18987.hp2 others(1): Show |
a0001a0007 | a0001c0001a0007c0011 | a0001c0001t0001a0007c0011t0001 | a0001c0001t0001g0007a0007c0011t0001g0007 | 4 | 446 | 0.0090 | 0 | c.-21 others(5): Show |
LCE2B | ENSG00000159455.9 | transcript | ENST00000368780.4 | protein_coding | 1/1 | chr1 | TogoVar | ||||||
LGALS9B_chr17_20444395_20472539 | 20467469 | A | ATC | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp2 HG00423.hp1 others(248): Show |
a0001a0002a0004others(11): Show | a0001c0001a0001c0025a0001c0026others(16): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(46): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0005others(161): Show | 251 | 433 | 0.5797 | 2 | c.-1_ others(6): Show |
p.Met others(3): Show |
LGALS9B | ENSG00000170298.16 | transcript | ENST00000423676.8 | protein_coding | 1/11 | 70/1718 | 1/1071 | 1/356 | chr17 | TogoVar | ||
LIAT1_chr17_405325_419666 | 413611 | CCCCGACC others(22): Show |
C | frameshift_variant | HIGH | NA18987.hp1 | a0034 | a0034c0036 | a0034c0036t0001 | a0034c0036t0001g0003 | 1 | 434 | 0.0023 | -29 | c.772 others(36): Show |
p.Asp others(5): Show |
LIAT1 | ENSG00000187624.9 | transcript | ENST00000360127.7 | protein_coding | 2/2 | 790/1841 | 772/1272 | 258/423 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
LOC122455342_chr17_76563797_76574648 | 76569083 | T | TG | frameshift_variant | HIGH | HG00423.hp1 HG00423.hp2 HG00741.hp1 others(18): Show |
a0002 | a0002c0003a0002c0004 | a0002c0003t0000a0002c0004t0000 | a0002c0003t0000g0000a0002c0004t0000g0000 | 21 | 440 | 0.0477 | 1 | c.565 others(4): Show |
p.His others(5): Show |
LOC122455342 | ENSG00000284526.3 | transcript | ENST00000713548.1 | protein_coding | 1/1 | 565/852 | 565/852 | 189/283 | chr17 | TogoVar | ||
LPL_chr8_19934253_19972259 | 19962213 | C | G | stop_gained | HIGH | HG00323.hp1 HG01081.hp1 HG01358.hp1 others(31): Show |
a0002a0009 | a0002c0004a0002c0007a0002c0032others(3): Show | a0002c0004t0004a0002c0004t0025a0002c0007t0004others(4): Show | a0002c0004t0004g0005a0002c0004t0004g0020a0002c0004t0004g0022others(22): Show | 34 | 384 | 0.0885 | 0 | c.142 others(4): Show |
p.Ser others(4): Show |
LPL | ENSG00000175445.17 | transcript | ENST00000650287.1 | protein_coding | 9/10 | 1609/3565 | 1421/1428 | 474/475 | chr8 | TogoVar | ||
LY9_chr1_160791174_160833255 | 160814452 | G | T | stop_gained | HIGH | NA18953.hp2 NA18987.hp1 |
a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0010a0006c0007t0001g0121 | 2 | 394 | 0.0051 | 0 | c.763 others(3): Show |
p.Glu others(4): Show |
LY9 | ENSG00000122224.18 | transcript | ENST00000263285.11 | protein_coding | 4/10 | 777/2421 | 763/1968 | 255/655 | chr1 | TogoVar | ||
MAT2A_chr2_85534168_85550281 | 85542658 | A | ACCAGTCA others(10): Show |
frameshift_variant | HIGH | NA18987.hp1 | a0002 | a0002c0005 | a0002c0005t0001 | a0002c0005t0001g0020 | 1 | 418 | 0.0024 | 17 | c.865 others(24): Show |
p.Lys others(5): Show |
MAT2A | ENSG00000168906.13 | transcript | ENST00000306434.8 | protein_coding | 7/9 | 986/2817 | 866/1188 | 289/395 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
MAT2A_chr2_85534168_85550281 | 85542748 | G | A | splice_donor_variant others(1): Show |
HIGH | NA18987.hp1 | a0002 | a0002c0005 | a0002c0005t0001 | a0002c0005t0001g0020 | 1 | 418 | 0.0024 | 0 | c.951 others(5): Show |
MAT2A | ENSG00000168906.13 | transcript | ENST00000306434.8 | protein_coding | 7/8 | chr2 | TogoVar | ||||||
MAT2A_chr2_85534168_85550281 | 85542749 | T | C | splice_donor_variant others(1): Show |
HIGH | NA18987.hp1 | a0002 | a0002c0005 | a0002c0005t0001 | a0002c0005t0001g0020 | 1 | 418 | 0.0024 | 0 | c.951 others(5): Show |
MAT2A | ENSG00000168906.13 | transcript | ENST00000306434.8 | protein_coding | 7/8 | chr2 | TogoVar | ||||||
MGAT5_chr2_134249072_134459621 | 134338422 | T | A | splice_donor_variant others(1): Show |
HIGH | NA18987.hp2 | a0001 | a0001c0001 | a0001c0001t0070 | a0001c0001t0070g0056 | 1 | 282 | 0.0036 | 0 | c.807 others(5): Show |
MGAT5 | ENSG00000152127.9 | transcript | ENST00000281923.4 | protein_coding | 6/15 | chr2 | TogoVar | ||||||
MICA_chr6_31398595_31420315 | 31412383 | TG | T | frameshift_variant | HIGH | HG00408.hp1 HG00408.hp2 HG00423.hp2 others(100): Show |
a0000 | a0000c0005a0000c0006a0000c0010others(5): Show | a0000c0005t0001a0000c0006t0001a0000c0010t0001others(5): Show | a0000c0005t0001g0005a0000c0005t0001g0018a0000c0005t0001g0021others(28): Show | 103 | 439 | 0.2346 | -1 | c.953 others(4): Show |
p.Gly others(5): Show |
MICA | ENSG00000204520.14 | transcript | ENST00000449934.7 | protein_coding | 5/6 | 991/1370 | 953/999 | 318/332 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
MS4A12_chr11_60487778_60512430 | 60497529 | C | T | stop_gained | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(178): Show |
a0002 | a0002c0002a0002c0004a0002c0005others(2): Show | a0002c0002t0001a0002c0002t0002a0002c0004t0001others(3): Show | a0002c0002t0001g0004a0002c0002t0001g0008a0002c0002t0001g0021others(55): Show | 181 | 432 | 0.4190 | 0 | c.211 others(3): Show |
p.Gln others(3): Show |
MS4A12 | ENSG00000071203.9 | transcript | ENST00000016913.8 | protein_coding | 2/7 | 268/1167 | 211/804 | 71/267 | chr11 | TogoVar | ||
MT1G_chr16_56661730_56673065 | 56667382 | T | A | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00408.hp1 HG00408.hp2 others(125): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0005a0001c0001t0001g0008a0001c0001t0002g0002others(4): Show | 128 | 470 | 0.2723 | 0 | c.29- others(4): Show |
MT1G | ENSG00000125144.14 | transcript | ENST00000379811.4 | protein_coding | 1/2 | chr16 | TogoVar | ||||||
NANOS1_chr10_119024714_119038730 | 119029847 | G | GC | frameshift_variant | HIGH | HG00621.hp2 HG01081.hp2 HG01099.hp1 others(25): Show |
a0000 | a0000c0002a0000c0007 | a0000c0002t0001a0000c0002t0002a0000c0002t0004others(3): Show | a0000c0002t0001g0000a0000c0002t0002g0000a0000c0002t0004g0000others(3): Show | 28 | 404 | 0.0693 | 1 | c.53d others(3): Show |
p.Pro others(4): Show |
NANOS1 | ENSG00000188613.7 | transcript | ENST00000425699.3 | protein_coding | 1/1 | 142/4017 | 54/879 | 18/292 | INFO_REALIGN_3_PRIME | chr10 | TogoVar |