regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ELP2_chr18_36124899_36185557 | 36156512 | TGAAATGT others(3): Show |
T | frameshift_variant | HIGH | NA19055.hp2 | a0010 | a0010c0017 | a0010c0017t0003 | a0010c0017t0003g0337 | 1 | 378 | 0.0027 | -10 | c.132 others(19): Show |
p.Lys others(5): Show |
ELP2 | ENSG00000134759.14 | transcript | ENST00000358232.11 | protein_coding | 13/22 | 1359/8432 | 1324/2481 | 442/826 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |
ERCC6L_chrX_72199665_72244027 | 72208285 | AC | A | frameshift_variant | HIGH | NA19055.hp1 | a0005 | a0005c0013 | a0005c0013t0001 | a0005c0013t0001g0205 | 1 | 286 | 0.0035 | -1 | c.481 others(4): Show |
p.Val others(5): Show |
ERCC6L | ENSG00000186871.7 | transcript | ENST00000334463.4 | protein_coding | 2/2 | 597/4218 | 481/3753 | 161/1250 | chrX | TogoVar | ||
ERV3-1_chr7_64985356_65011687 | 64992360 | G | A | stop_gained | HIGH | HG00140.hp1 HG00408.hp2 HG00558.hp2 others(60): Show |
a0003a0013 | a0003c0003a0013c0019 | a0003c0003t0001a0013c0019t0001 | a0003c0003t0001g0003a0003c0003t0001g0015a0003c0003t0001g0021others(12): Show | 63 | 458 | 0.1376 | 0 | c.667 others(3): Show |
p.Arg others(4): Show |
ERV3-1 | ENSG00000213462.5 | transcript | ENST00000394323.3 | protein_coding | 2/2 | 1202/3206 | 667/1815 | 223/604 | chr7 | TogoVar | ||
FAM110A_chr20_828715_851277 | 844829 | G | T | stop_gained | HIGH | NA19055.hp1 | a0004 | a0004c0008 | a0004c0008t0024 | a0004c0008t0024g0129 | 1 | 436 | 0.0023 | 0 | c.25G others(2): Show |
p.Gly others(2): Show |
FAM110A | ENSG00000125898.13 | transcript | ENST00000381941.8 | protein_coding | 2/2 | 359/1807 | 25/888 | 9/295 | chr20 | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54182716 | GC | G | frameshift_variant | HIGH | NA19055.hp1 | a0008 | a0008c0010 | a0008c0010t0075 | a0008c0010t0075g0188 | 1 | 190 | 0.0053 | -1 | c.482 others(4): Show |
p.Gly others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 1/16 | 538/8056 | 482/3291 | 161/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54183088 | C | CTG | frameshift_variant | HIGH | NA19055.hp1 | a0008 | a0008c0010 | a0008c0010t0075 | a0008c0010t0075g0188 | 1 | 190 | 0.0053 | 2 | c.109 others(9): Show |
p.Gln others(4): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 1/16 | 166/8056 | 110/3291 | 37/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54183149 | G | GC | frameshift_variant | HIGH | NA19055.hp1 | a0008 | a0008c0010 | a0008c0010t0075 | a0008c0010t0075g0188 | 1 | 190 | 0.0053 | 1 | c.49d others(3): Show |
p.Ala others(4): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 1/16 | 105/8056 | 49/3291 | 17/1096 | chrX | TogoVar | ||
FIG4_chr6_109686296_109830426 | 109732621 | G | GT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00323.hp2 HG00408.hp2 others(276): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0002c0002others(13): Show | a0001c0001t0002a0001c0001t0003a0001c0003t0001others(20): Show | a0001c0001t0002g0015a0001c0001t0002g0017a0001c0001t0002g0122others(274): Show | 279 | 370 | 0.7541 | 1 | c.447 others(6): Show |
FIG4 | ENSG00000112367.12 | transcript | ENST00000230124.8 | protein_coding | 4/22 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
FOXD4L5_chr9_65277101_65290209 | 65283162 | AG | A | frameshift_variant | HIGH | HG00323.hp1 HG00323.hp2 HG00597.hp1 others(52): Show |
a0000 | a0000c0001a0000c0007a0000c0008others(6): Show | a0000c0001t0001a0000c0001t0004a0000c0001t0005others(12): Show | a0000c0001t0001g0000a0000c0001t0004g0000a0000c0001t0005g0000others(12): Show | 55 | 81 | 0.6790 | -1 | c.121 others(5): Show |
p.Trp others(5): Show |
FOXD4L5 | ENSG00000204779.2 | transcript | ENST00000377420.1 | protein_coding | 1/1 | 2047/3109 | 1215/1251 | 405/416 | chr9 | TogoVar | ||
FOXD4_chr9_111231_123417 | 116800 | C | G | stop_lost | HIGH | HG00423.hp1 HG00544.hp1 HG00639.hp1 others(105): Show |
a0000 | a0000c0002a0000c0006a0000c0016others(5): Show | a0000c0002t0001a0000c0002t0002a0000c0002t0009others(9): Show | a0000c0002t0001g0000a0000c0002t0002g0000a0000c0002t0009g0000others(9): Show | 108 | 452 | 0.2389 | 0 | c.132 others(4): Show |
p.Ter others(11): Show |
FOXD4 | ENSG00000170122.6 | transcript | ENST00000382500.4 | protein_coding | 1/1 | 1618/2187 | 1320/1320 | 440/439 | chr9 | TogoVar | ||
FTSJ1_chrX_48471199_48491350 | 48481655 | T | TA | frameshift_variant others(1): Show |
HIGH | NA19055.hp1 | a0005 | a0005c0008 | a0005c0008t0008 | a0005c0008t0008g0029 | 1 | 308 | 0.0033 | 1 | c.596 others(4): Show |
p.Tyr others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 9/13 | 882/1899 | 597/990 | 199/329 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FTSJ1_chrX_48471199_48491350 | 48481693 | AC | A | frameshift_variant | HIGH | NA19055.hp1 | a0005 | a0005c0008 | a0005c0008t0008 | a0005c0008t0008g0029 | 1 | 308 | 0.0033 | -1 | c.637 others(4): Show |
p.Leu others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 9/13 | 922/1899 | 637/990 | 213/329 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FTSJ1_chrX_48471199_48491350 | 48482421 | TG | T | frameshift_variant | HIGH | NA19055.hp1 | a0005 | a0005c0008 | a0005c0008t0008 | a0005c0008t0008g0029 | 1 | 308 | 0.0033 | -1 | c.676 others(4): Show |
p.Asp others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 10/13 | 961/1899 | 676/990 | 226/329 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FTSJ1_chrX_48471199_48491350 | 48482501 | C | CA | frameshift_variant | HIGH | NA19055.hp1 | a0005 | a0005c0008 | a0005c0008t0008 | a0005c0008t0008g0029 | 1 | 308 | 0.0033 | 1 | c.754 others(8): Show |
p.Leu others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 10/13 | 1040/1899 | 755/990 | 252/329 | chrX | TogoVar | ||
FTSJ1_chrX_48471199_48491350 | 48482638 | G | GC | frameshift_variant | HIGH | NA18956.hp1 NA19006.hp1 NA19055.hp1 |
a0003a0004a0005 | a0003c0006a0004c0007a0005c0008 | a0003c0006t0013a0004c0007t0001a0005c0008t0008 | a0003c0006t0013g0025a0004c0007t0001g0069a0005c0008t0008g0029 | 3 | 308 | 0.0097 | 1 | c.807 others(4): Show |
p.Ile others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 11/13 | 1093/1899 | 808/990 | 270/329 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FTSJ1_chrX_48471199_48491350 | 48482786 | GC | G | frameshift_variant | HIGH | NA19055.hp1 | a0005 | a0005c0008 | a0005c0008t0008 | a0005c0008t0008g0029 | 1 | 308 | 0.0033 | -1 | c.953 others(4): Show |
p.Pro others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 11/13 | 1238/1899 | 953/990 | 318/329 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FUNDC1_chrX_44518639_44547859 | 44527271 | T | TTG | frameshift_variant | HIGH | NA19055.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0109 | 1 | 313 | 0.0032 | 2 | c.354 others(9): Show |
p.Lys others(5): Show |
FUNDC1 | ENSG00000069509.6 | transcript | ENST00000378045.5 | protein_coding | 4/5 | 382/1054 | 355/468 | 119/155 | chrX | TogoVar | ||
GAB4_chr22_16956936_17013222 | 16988159 | C | A | stop_gained | HIGH | HG00280.hp1 HG00544.hp2 HG00558.hp2 others(145): Show |
a0002a0005 | a0002c0002a0002c0008a0002c0013others(5): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(9): Show | a0002c0002t0001g0002a0002c0002t0001g0005a0002c0002t0001g0007others(74): Show | 148 | 430 | 0.3442 | 0 | c.487 others(3): Show |
p.Gly others(4): Show |
GAB4 | ENSG00000215568.9 | transcript | ENST00000400588.5 | protein_coding | 3/10 | 595/2630 | 487/1725 | 163/574 | chr22 | TogoVar | ||
GDPD4_chr11_77211558_77306686 | 77243743 | T | TA | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(81): Show |
a0003a0004a0006others(1): Show | a0003c0003a0004c0004a0006c0006others(1): Show | a0003c0003t0001a0003c0003t0002a0003c0003t0003others(6): Show | a0003c0003t0001g0042a0003c0003t0001g0055a0003c0003t0001g0073others(79): Show | 84 | 350 | 0.2400 | 1 | c.119 others(5): Show |
p.Ile others(5): Show |
GDPD4 | ENSG00000178795.10 | transcript | ENST00000315938.5 | protein_coding | 13/17 | 1526/2617 | 1191/1563 | 397/520 | chr11 | TogoVar | ||
GOLGA6L10_chr15_82334993_82354475 | 82345107 | A | ATGTAGCC others(33): Show |
frameshift_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(57): Show |
a0003a0005a0043 | a0003c0003a0003c0061a0005c0005others(1): Show | a0003c0003t0002a0003c0003t0015a0003c0003t0019others(7): Show | a0003c0003t0002g0001a0003c0003t0002g0018a0003c0003t0002g0041others(23): Show | 60 | 301 | 0.1993 | 40 | c.752 others(47): Show |
p.Cys others(5): Show |
GOLGA6L10 | ENSG00000278662.6 | transcript | ENST00000610657.2 | protein_coding | 6/9 | 852/4452 | 752/1569 | 251/522 | chr15 | TogoVar | ||
GOLGA6L10_chr15_82334993_82354475 | 82345110 | C | CGT | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(63): Show |
a0003a0005a0016others(4): Show | a0003c0003a0003c0061a0005c0005others(5): Show | a0003c0003t0002a0003c0003t0015a0003c0003t0019others(11): Show | a0003c0003t0002g0001a0003c0003t0002g0018a0003c0003t0002g0041others(27): Show | 66 | 301 | 0.2193 | 2 | c.749 others(9): Show |
p.Cys others(5): Show |
GOLGA6L10 | ENSG00000278662.6 | transcript | ENST00000610657.2 | protein_coding | 6/9 | 849/4452 | 749/1569 | 250/522 | chr15 | TogoVar | ||
GPR33_chr14_31477875_31493039 | 31483548 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(423): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0007others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(82): Show | 426 | 448 | 0.9509 | 0 | c.418 others(3): Show |
p.Arg others(4): Show |
GPR33 | ENSG00000214943.5 | transcript | ENST00000399285.5 | protein_coding | 2/2 | 567/1240 | 418/1002 | 140/333 | chr14 | TogoVar | ||
GRIPAP1_chrX_48968723_49007264 | 48985275 | TG | T | frameshift_variant | HIGH | NA19055.hp1 | a0008 | a0008c0013 | a0008c0013t0001 | a0008c0013t0001g0072 | 1 | 297 | 0.0034 | -1 | c.116 others(5): Show |
p.Gln others(5): Show |
GRIPAP1 | ENSG00000068400.14 | transcript | ENST00000376423.8 | protein_coding | 14/26 | 1203/3031 | 1168/2526 | 390/841 | chrX | TogoVar | ||
GSDMB_chr17_39899595_39923635 | 39908216 | T | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(122): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0004a0002c0002t0005 | a0002c0002t0001g0002a0002c0002t0001g0004a0002c0002t0001g0014others(47): Show | 125 | 400 | 0.3125 | 0 | c.662 others(5): Show |
GSDMB | ENSG00000073605.19 | transcript | ENST00000418519.6 | protein_coding | 5/10 | chr17 | TogoVar | ||||||
H2BW2_chrX_104034956_104047454 | 104040193 | C | T | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(109): Show |
a0002a0004 | a0002c0002a0002c0007a0004c0009 | a0002c0002t0001a0002c0002t0002a0002c0007t0001others(1): Show | a0002c0002t0001g0001a0002c0002t0001g0004a0002c0002t0001g0013others(4): Show | 112 | 332 | 0.3374 | 0 | c.199 others(3): Show |
p.Gln others(3): Show |
H2BW2 | ENSG00000101812.15 | transcript | ENST00000675318.3 | protein_coding | 1/4 | 238/870 | 199/447 | 67/148 | chrX | TogoVar | ||
HLA-B_chr6_31348875_31362179 | 31356366 | G | T | stop_gained | HIGH | HG00438.hp2 HG00621.hp2 HG01074.hp1 others(44): Show |
a0014a0018a0024others(7): Show | a0014c0014a0018c0016a0024c0023others(7): Show | a0014c0014t0010a0014c0014t0036a0018c0016t0006others(9): Show | a0014c0014t0010g0020a0014c0014t0010g0063a0014c0014t0036g0110others(13): Show | 47 | 468 | 0.1004 | 0 | c.420 others(3): Show |
p.Tyr others(4): Show |
HLA-B | ENSG00000234745.14 | transcript | ENST00000412585.7 | protein_coding | 3/8 | 441/1536 | 420/1089 | 140/362 | chr6 | TogoVar | ||
HLA-DPB1_chr6_33070990_33094696 | 33080689 | G | T | stop_gained | HIGH | HG00280.hp1 HG00323.hp1 HG00673.hp1 others(113): Show |
a0000a0006a0008others(10): Show | a0000c0009a0000c0012a0000c0018others(15): Show | a0000c0009t0006a0000c0009t0018a0000c0012t0006others(18): Show | a0000c0009t0006g0014a0000c0009t0006g0038a0000c0009t0006g0089others(31): Show | 116 | 455 | 0.2550 | 0 | c.118 others(3): Show |
p.Gly others(3): Show |
HLA-DPB1 | ENSG00000223865.11 | transcript | ENST00000418931.7 | protein_coding | 2/6 | 170/3991 | 118/777 | 40/258 | chr6 | TogoVar | ||
HLA-DQB1_chr6_32654467_32671657 | 32664861 | C | A | stop_gained | HIGH | HG00140.hp1 HG00408.hp1 HG00438.hp1 others(99): Show |
a0005a0009a0010others(2): Show | a0005c0006a0005c0019a0009c0010others(3): Show | a0005c0006t0004a0005c0019t0004a0009c0010t0001others(6): Show | a0005c0006t0004g0005a0005c0006t0004g0016a0005c0006t0004g0022others(15): Show | 102 | 402 | 0.2537 | 0 | c.316 others(3): Show |
p.Glu others(4): Show |
HLA-DQB1 | ENSG00000179344.17 | transcript | ENST00000434651.7 | protein_coding | 2/5 | 366/1605 | 316/786 | 106/261 | chr6 | TogoVar | ||
HLA-DRB1_chr6_32573775_32594848 | 32584174 | GCC | G | frameshift_variant | HIGH | HG00280.hp2 HG01993.hp1 HG02071.hp1 others(9): Show |
a0014a0018a0020 | a0014c0015a0018c0018a0020c0021 | a0014c0015t0008a0018c0018t0008a0020c0021t0001others(1): Show | a0014c0015t0008g0028a0014c0015t0008g0066a0014c0015t0008g0067others(8): Show | 12 | 208 | 0.0577 | -2 | c.303 others(9): Show |
p.Ala others(5): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 2/6 | 410/1223 | 303/801 | 101/266 | chr6 | TogoVar | ||
HLA-DRB1_chr6_32573775_32594848 | 32584184 | G | GTC | frameshift_variant | HIGH | HG00280.hp2 HG01993.hp1 HG02071.hp1 others(9): Show |
a0014a0018a0020 | a0014c0015a0018c0018a0020c0021 | a0014c0015t0008a0018c0018t0008a0020c0021t0001others(1): Show | a0014c0015t0008g0028a0014c0015t0008g0066a0014c0015t0008g0067others(8): Show | 12 | 208 | 0.0577 | 2 | c.294 others(9): Show |
p.Gln others(4): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 2/6 | 400/1223 | 294/801 | 98/266 | chr6 | TogoVar | ||
HLA-DRB1_chr6_32573775_32594848 | 32584364 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(128): Show |
a0002a0003a0005others(20): Show | a0002c0003a0003c0002a0005c0008others(21): Show | a0002c0003t0002a0003c0002t0005a0005c0008t0006others(22): Show | a0002c0003t0002g0008a0002c0003t0002g0020a0002c0003t0002g0021others(76): Show | 131 | 208 | 0.6298 | 0 | c.115 others(3): Show |
p.Gln others(3): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 2/6 | 221/1223 | 115/801 | 39/266 | chr6 | TogoVar | ||
HLA-DRB1_chr6_32573775_32594848 | 32584366 | C | T | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(133): Show |
a0002a0003a0005others(21): Show | a0002c0003a0003c0002a0005c0008others(22): Show | a0002c0003t0002a0003c0002t0005a0005c0008t0006others(23): Show | a0002c0003t0002g0008a0002c0003t0002g0020a0002c0003t0002g0021others(77): Show | 136 | 208 | 0.6539 | 0 | c.113 others(3): Show |
p.Trp others(3): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 2/6 | 219/1223 | 113/801 | 38/266 | chr6 | TogoVar | ||
HP_chr16_72049505_72066055 | 72056410 | GGCTTCTA others(1717): Show |
G | exon_loss_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00438.hp2 others(102): Show |
a0002 | a0002c0002a0002c0006a0002c0018 | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(4): Show | a0002c0002t0001g0002a0002c0002t0001g0018a0002c0002t0001g0023others(6): Show | 105 | 425 | 0.2471 | -1724 | c.191 others(15): Show |
HP | ENSG00000257017.10 | transcript | ENST00000355906.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
HRNR_chr1_152207076_152229193 | 152223252 | AT | A | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(379): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(208): Show | a0001c0001t0002a0001c0001t0012a0001c0002t0002others(209): Show | a0001c0001t0002g0002a0001c0001t0002g0026a0001c0001t0002g0052others(217): Show | 382 | 418 | 0.9139 | -1 | c.1de others(2): Show |
p.Met others(3): Show |
HRNR | ENSG00000197915.7 | transcript | ENST00000368801.4 | protein_coding | 2/3 | 77/9629 | 1/8553 | 1/2850 | chr1 | TogoVar | ||
HSF4_chr16_67159745_67174941 | 67167490 | A | AATTTGGG others(4): Show |
frameshift_variant | HIGH | NA19055.hp2 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0001 | 1 | 266 | 0.0038 | 11 | c.747 others(18): Show |
p.Ser others(5): Show |
HSF4 | ENSG00000102878.18 | transcript | ENST00000521374.6 | protein_coding | 8/13 | 825/1702 | 758/1479 | 253/492 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
HSFX2_chrX_149587512_149600314 | 149592694 | TG | T | frameshift_variant | HIGH | NA19055.hp1 | a0017 | a0017c0018 | a0017c0018t0003 | a0017c0018t0003g0013 | 1 | 279 | 0.0036 | -1 | c.116 others(5): Show |
p.Pro others(5): Show |
HSFX2 | ENSG00000268738.3 | transcript | ENST00000598963.3 | protein_coding | 2/2 | 1783/1966 | 1169/1272 | 390/423 | chrX | TogoVar | ||
HSFX2_chrX_149587512_149600314 | 149594159 | C | CT | frameshift_variant | HIGH | NA19055.hp1 | a0017 | a0017c0018 | a0017c0018t0003 | a0017c0018t0003g0013 | 1 | 279 | 0.0036 | 1 | c.541 others(4): Show |
p.Arg others(5): Show |
HSFX2 | ENSG00000268738.3 | transcript | ENST00000598963.3 | protein_coding | 1/2 | 1155/1966 | 541/1272 | 181/423 | chrX | TogoVar | ||
HSFX2_chrX_149587512_149600314 | 149594198 | C | CA | frameshift_variant | HIGH | NA19055.hp1 | a0017 | a0017c0018 | a0017c0018t0003 | a0017c0018t0003g0013 | 1 | 279 | 0.0036 | 1 | c.502 others(4): Show |
p.Cys others(5): Show |
HSFX2 | ENSG00000268738.3 | transcript | ENST00000598963.3 | protein_coding | 1/2 | 1116/1966 | 502/1272 | 168/423 | chrX | TogoVar | ||
HSFX2_chrX_149587512_149600314 | 149594208 | GT | G | frameshift_variant | HIGH | NA19055.hp1 | a0017 | a0017c0018 | a0017c0018t0003 | a0017c0018t0003g0013 | 1 | 279 | 0.0036 | -1 | c.492 others(4): Show |
p.Lys others(5): Show |
HSFX2 | ENSG00000268738.3 | transcript | ENST00000598963.3 | protein_coding | 1/2 | 1106/1966 | 492/1272 | 164/423 | chrX | TogoVar | ||
HSPA8_chr11_123052489_123067136 | 123059944 | A | AGATTCCA others(4): Show |
frameshift_variant | HIGH | NA19055.hp1 | a0003 | a0003c0010 | a0003c0010t0003 | a0003c0010t0003g0045 | 1 | 424 | 0.0024 | 11 | c.638 others(18): Show |
p.Phe others(5): Show |
HSPA8 | ENSG00000109971.14 | transcript | ENST00000534624.6 | protein_coding | 5/9 | 726/2264 | 648/1941 | 216/646 | chr11 | TogoVar | ||
HYAL4_chr7_123840169_123882481 | 123868706 | G | GATTGGGA others(3): Show |
frameshift_variant others(1): Show |
HIGH | NA19055.hp2 | a0005 | a0005c0007 | a0005c0007t0001 | a0005c0007t0001g0125 | 1 | 394 | 0.0025 | 10 | c.434 others(17): Show |
p.Tyr others(5): Show |
HYAL4 | ENSG00000106302.10 | transcript | ENST00000223026.9 | protein_coding | 3/5 | 1082/2410 | 444/1446 | 148/481 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
IFNA10_chr9_21201181_21212143 | 21207038 | A | T | stop_gained | HIGH | HG00099.hp1 HG00323.hp1 HG00544.hp2 others(191): Show |
a0002 | a0002c0002a0002c0003a0002c0004others(9): Show | a0002c0002t0002a0002c0002t0012a0002c0002t0013others(13): Show | a0002c0002t0002g0000a0002c0002t0012g0000a0002c0002t0013g0000others(13): Show | 194 | 457 | 0.4245 | 0 | c.60T others(2): Show |
p.Cys others(3): Show |
IFNA10 | ENSG00000186803.3 | transcript | ENST00000357374.2 | protein_coding | 1/1 | 106/963 | 60/570 | 20/189 | chr9 | TogoVar | ||
IGBP1_chrX_70128447_70171324 | 70134615 | AC | A | frameshift_variant | HIGH | NA19055.hp1 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0189 | 1 | 245 | 0.0041 | -1 | c.285 others(4): Show |
p.Ser others(4): Show |
IGBP1 | ENSG00000089289.16 | transcript | ENST00000356413.5 | protein_coding | 3/7 | 604/1682 | 285/1020 | 95/339 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
KDM4A_chr1_43645149_43710518 | 43660291 | CA | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(188): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(169): Show | 191 | 370 | 0.5162 | -1 | c.315 others(6): Show |
KDM4A | ENSG00000066135.13 | transcript | ENST00000372396.4 | protein_coding | 3/21 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
KDM6A_chrX_44868188_45117779 | 45062736 | GC | G | frameshift_variant | HIGH | NA19055.hp1 | a0006 | a0006c0008 | a0006c0008t0008 | a0006c0008t0008g0156 | 1 | 199 | 0.0050 | -1 | c.167 others(5): Show |
p.Gln others(5): Show |
KDM6A | ENSG00000147050.18 | transcript | ENST00000611820.5 | protein_coding | 16/30 | 2036/6094 | 1672/4362 | 558/1453 | chrX | TogoVar | ||
KRBA1_chr7_149709951_149739575 | 149723729 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(279): Show |
a0001a0002a0003others(17): Show | a0001c0001a0001c0009a0001c0025others(24): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(30): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(137): Show | 282 | 414 | 0.6812 | 1 | c.875 others(6): Show |
KRBA1 | ENSG00000133619.18 | transcript | ENST00000496259.6 | protein_coding | 7/16 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
KRT10_chr17_40813117_40827614 | 40818870 | G | GCCGCCGG others(24): Show |
frameshift_variant | HIGH | NA19055.hp1 | a0018 | a0018c0023 | a0018c0023t0001 | a0018c0023t0001g0029 | 1 | 426 | 0.0024 | 31 | c.166 others(40): Show |
p.Gly others(5): Show |
KRT10 | ENSG00000186395.9 | transcript | ENST00000269576.6 | protein_coding | 7/8 | 1693/2143 | 1664/1755 | 555/584 | chr17 | TogoVar | ||
KRT24_chr17_40692991_40708752 | 40701882 | CA | C | frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(201): Show |
a0001a0010a0012 | a0001c0001a0001c0013a0001c0014others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0013t0001others(4): Show | a0001c0001t0001g0003a0001c0001t0001g0005a0001c0001t0001g0011others(54): Show | 204 | 424 | 0.4811 | -1 | c.666 others(4): Show |
p.Asn others(5): Show |
KRT24 | ENSG00000167916.5 | transcript | ENST00000264651.3 | protein_coding | 2/8 | 725/1883 | 666/1578 | 222/525 | chr17 | TogoVar | ||
KRT37_chr17_41415547_41429585 | 41422807 | G | A | stop_gained | HIGH | HG00408.hp2 HG00544.hp2 HG00609.hp1 others(99): Show |
a0002a0008 | a0002c0002a0002c0020a0008c0009 | a0002c0002t0002a0002c0020t0002a0008c0009t0002 | a0002c0002t0002g0002a0002c0002t0002g0013a0002c0002t0002g0036others(2): Show | 102 | 409 | 0.2494 | 0 | c.703 others(3): Show |
p.Gln others(4): Show |
KRT37 | ENSG00000108417.4 | transcript | ENST00000225550.4 | protein_coding | 3/7 | 765/1743 | 703/1350 | 235/449 | chr17 | TogoVar | ||
KRTAP13-2_chr21_30366390_30377271 | 30371809 | A | T | stop_gained | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(118): Show |
a0002a0007a0008others(1): Show | a0002c0002a0007c0007a0008c0008others(1): Show | a0002c0002t0001a0007c0007t0001a0008c0008t0001others(1): Show | a0002c0002t0001g0000a0007c0007t0001g0000a0008c0008t0001g0000others(1): Show | 121 | 462 | 0.2619 | 0 | c.405 others(3): Show |
p.Cys others(4): Show |
KRTAP13-2 | ENSG00000182816.9 | transcript | ENST00000399889.4 | protein_coding | 1/1 | 463/882 | 405/528 | 135/175 | chr21 | TogoVar |