regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
DLG3_chrX_70439835_70510490 | 70445489 | C | CA | frameshift_variant | HIGH | NA19058.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0246 | 1 | 278 | 0.0036 | 1 | c.291 others(4): Show |
p.Leu others(4): Show |
DLG3 | ENSG00000082458.12 | transcript | ENST00000374360.8 | protein_coding | 1/19 | 659/6042 | 292/2454 | 98/817 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
DLG3_chrX_70439835_70510490 | 70450250 | A | AG | frameshift_variant | HIGH | NA19058.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0246 | 1 | 278 | 0.0036 | 1 | c.791 others(4): Show |
p.Ala others(5): Show |
DLG3 | ENSG00000082458.12 | transcript | ENST00000374360.8 | protein_coding | 5/19 | 1159/6042 | 792/2454 | 264/817 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
DLG3_chrX_70439835_70510490 | 70451967 | TC | T | frameshift_variant | HIGH | NA19058.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0246 | 1 | 278 | 0.0036 | -1 | c.109 others(5): Show |
p.Thr others(5): Show |
DLG3 | ENSG00000082458.12 | transcript | ENST00000374360.8 | protein_coding | 7/19 | 1459/6042 | 1092/2454 | 364/817 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
DLG4_chr17_7182187_7222627 | 7194496 | C | T | splice_acceptor_variant others(1): Show |
HIGH | NA19058.hp1 | a0001 | a0001c0001 | a0001c0001t0026 | a0001c0001t0026g0074 | 1 | 376 | 0.0027 | 0 | c.130 others(6): Show |
DLG4 | ENSG00000132535.22 | transcript | ENST00000399506.9 | protein_coding | 11/19 | chr17 | TogoVar | ||||||
DLG4_chr17_7182187_7222627 | 7194497 | T | G | splice_acceptor_variant others(1): Show |
HIGH | NA19058.hp1 | a0001 | a0001c0001 | a0001c0001t0026 | a0001c0001t0026g0074 | 1 | 376 | 0.0027 | 0 | c.130 others(6): Show |
DLG4 | ENSG00000132535.22 | transcript | ENST00000399506.9 | protein_coding | 11/19 | chr17 | TogoVar | ||||||
DMBT1_chr10_122555754_122648736 | 122601633 | CTTAACCT others(12170): Show |
C | exon_loss_variant | HIGH | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(96): Show |
a0003a0004a0007others(32): Show | a0003c0005a0003c0017a0003c0086others(38): Show | a0003c0005t0001a0003c0017t0001a0003c0086t0002others(44): Show | a0003c0005t0001g0091a0003c0005t0001g0092a0003c0005t0001g0094others(90): Show | 99 | 282 | 0.3511 | -12177 | c.350 others(9): Show |
DMBT1 | ENSG00000187908.20 | transcript | ENST00000338354.10 | protein_coding | 30/56 | 3523/7984 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||
DMBT1_chr10_122555754_122648736 | 122601959 | TGTCAGCC others(4052): Show |
T | exon_loss_variant | HIGH | HG00673.hp2 HG01081.hp2 HG01099.hp2 others(18): Show |
a0001a0012a0046others(2): Show | a0001c0001a0001c0004a0001c0074others(5): Show | a0001c0001t0002a0001c0004t0001a0001c0004t0003others(6): Show | a0001c0001t0002g0165a0001c0001t0002g0179a0001c0001t0002g0183others(18): Show | 21 | 282 | 0.0745 | -4059 | c.366 others(17): Show |
DMBT1 | ENSG00000187908.20 | transcript | ENST00000338354.10 | protein_coding | 30/56 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
DNAJC28_chr21_33483055_33496716 | 33488442 | CAATTA | C | frameshift_variant | HIGH | HG00323.hp1 HG00609.hp1 HG00609.hp2 others(58): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0004a0002c0002t0001g0010a0002c0002t0001g0012others(3): Show | 61 | 415 | 0.1470 | -5 | c.947 others(12): Show |
p.Leu others(5): Show |
DNAJC28 | ENSG00000177692.13 | transcript | ENST00000381947.4 | protein_coding | 2/2 | 1097/1485 | 947/1167 | 316/388 | chr21 | TogoVar | ||
DYNLT5_chr1_66747459_66784047 | 66776404 | G | A | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00323.hp2 HG00544.hp1 others(52): Show |
a0003 | a0003c0003 | a0003c0003t0002a0003c0003t0010a0003c0003t0021 | a0003c0003t0002g0007a0003c0003t0002g0011a0003c0003t0002g0012others(30): Show | 55 | 402 | 0.1368 | 0 | c.336 others(5): Show |
DYNLT5 | ENSG00000152760.10 | transcript | ENST00000282670.7 | protein_coding | 4/4 | chr1 | TogoVar | ||||||
DZANK1_chr20_18378367_18472030 | 18412855 | C | T | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(210): Show |
a0001a0002a0003others(12): Show | a0001c0001a0001c0007a0001c0015others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(34): Show | a0001c0001t0001g0285a0001c0001t0001g0293a0001c0001t0001g0333others(196): Show | 213 | 374 | 0.5695 | 0 | c.130 others(6): Show |
DZANK1 | ENSG00000089091.17 | transcript | ENST00000699568.1 | protein_coding | 12/20 | chr20 | TogoVar | ||||||
ECI1_chr16_2234402_2256587 | 2243081 | GCAGTGCT others(12): Show |
G | frameshift_variant | HIGH | NA19058.hp1 | a0008 | a0008c0011 | a0008c0011t0001 | a0008c0011t0001g0105 | 1 | 436 | 0.0023 | -19 | c.688 others(26): Show |
p.Glu others(5): Show |
ECI1 | ENSG00000167969.13 | transcript | ENST00000301729.9 | protein_coding | 6/7 | 727/1507 | 688/909 | 230/302 | chr16 | TogoVar | ||
EGF_chr4_109907883_110018766 | 110011233 | G | GC | frameshift_variant | HIGH | HG00423.hp1 HG00609.hp2 HG00621.hp1 others(44): Show |
a0003a0013a0021 | a0003c0003a0013c0015a0021c0031 | a0003c0003t0005a0003c0003t0008a0003c0003t0018others(4): Show | a0003c0003t0005g0002a0003c0003t0005g0003a0003c0003t0005g0014others(43): Show | 47 | 388 | 0.1211 | 1 | c.340 others(5): Show |
p.Gln others(6): Show |
EGF | ENSG00000138798.13 | transcript | ENST00000265171.10 | protein_coding | 24/24 | 3860/6388 | 3407/3624 | 1136/1207 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |
ENDOV_chr17_80410167_80443086 | 80422204 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00438.hp1 HG00609.hp1 others(32): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0018a0001c0001t0001g0172a0001c0001t0001g0257others(15): Show | 35 | 420 | 0.0833 | 0 | c.364 others(5): Show |
ENDOV | ENSG00000173818.17 | transcript | ENST00000518137.6 | protein_coding | 3/9 | chr17 | TogoVar | ||||||
ENTR1_chr9_136396922_136415614 | 136410362 | C | CG | frameshift_variant | HIGH | HG00558.hp1 HG01496.hp2 HG01952.hp1 others(13): Show |
a0003 | a0003c0005a0003c0007a0003c0008others(3): Show | a0003c0005t0001a0003c0005t0016a0003c0007t0002others(4): Show | a0003c0005t0001g0081a0003c0005t0001g0082a0003c0005t0001g0083others(12): Show | 16 | 412 | 0.0388 | 1 | c.35d others(3): Show |
p.Leu others(4): Show |
ENTR1 | ENSG00000165689.17 | transcript | ENST00000357365.8 | protein_coding | 1/10 | 252/2391 | 35/1308 | 12/435 | chr9 | TogoVar | ||
EPB41L4A_chr5_112157619_112424277 | 112165119 | C | CTAAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(219): Show |
a0001a0002a0003others(13): Show | a0001c0001a0001c0002a0001c0021others(26): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(82): Show | a0001c0001t0001g0086a0001c0001t0001g0100a0001c0001t0001g0103others(217): Show | 222 | 228 | 0.9737 | 5 | c.193 others(18): Show |
EPB41L4A | ENSG00000129595.14 | transcript | ENST00000261486.6 | protein_coding | 22/22 | chr5 | TogoVar | ||||||
F12_chr5_177397141_177414564 | 177404498 | C | G | splice_donor_variant others(1): Show |
HIGH | NA19058.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0113 | 1 | 454 | 0.0022 | 0 | c.800 others(5): Show |
F12 | ENSG00000131187.11 | transcript | ENST00000253496.4 | protein_coding | 8/13 | chr5 | TogoVar | ||||||
FAM166B_chr9_35556831_35568878 | 35562396 | A | ATAGT | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00438.hp1 HG00558.hp2 others(84): Show |
a0002a0003 | a0002c0003a0003c0004a0003c0005 | a0002c0003t0001a0002c0003t0002a0003c0004t0001others(1): Show | a0002c0003t0001g0003a0002c0003t0001g0015a0002c0003t0001g0017others(4): Show | 87 | 436 | 0.1995 | 4 | c.719 others(11): Show |
p.Tyr others(5): Show |
FAM166B | ENSG00000215187.13 | transcript | ENST00000399742.7 | protein_coding | 5/6 | 772/1054 | 722/828 | 241/275 | chr9 | TogoVar | ||
FAM83E_chr19_48594961_48620076 | 48603881 | T | TCGGTGCA others(6): Show |
frameshift_variant | HIGH | NA19058.hp1 | a0010 | a0010c0025 | a0010c0025t0054 | a0010c0025t0054g0192 | 1 | 414 | 0.0024 | 13 | c.776 others(20): Show |
p.Gly others(5): Show |
FAM83E | ENSG00000105523.4 | transcript | ENST00000263266.4 | protein_coding | 6/7 | 2315/4112 | 788/1437 | 263/478 | chr19 | TogoVar | ||
FAM86B1_chr8_12177106_12199082 | 12189807 | C | T | splice_donor_variant others(1): Show |
HIGH | HG00323.hp2 HG00423.hp1 HG00558.hp2 others(52): Show |
a0001a0002a0007 | a0001c0001a0001c0005a0001c0015others(4): Show | a0001c0001t0002a0001c0005t0002a0001c0005t0013others(7): Show | a0001c0001t0002g0002a0001c0001t0002g0003a0001c0001t0002g0006others(39): Show | 55 | 176 | 0.3125 | 0 | c.240 others(5): Show |
FAM86B1 | ENSG00000186523.15 | transcript | ENST00000448228.7 | protein_coding | 3/6 | chr8 | TogoVar | ||||||
FBXL8_chr16_67154957_67169174 | 67161939 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00408.hp1 HG00438.hp1 HG01256.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 | 13 | 244 | 0.0533 | 0 | c.152 others(5): Show |
FBXL8 | ENSG00000135722.9 | transcript | ENST00000258200.8 | protein_coding | 2/2 | chr16 | TogoVar | ||||||
FOLR3_chr11_72130725_72144892 | 72139110 | CTA | C | frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(333): Show |
a0001a0003a0005 | a0001c0001a0001c0003a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0010others(24): Show | 336 | 384 | 0.8750 | -2 | c.320 others(9): Show |
p.Tyr others(5): Show |
FOLR3 | ENSG00000110203.10 | transcript | ENST00000611028.3 | protein_coding | 3/5 | 370/849 | 320/738 | 107/245 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
FOXD4_chr9_111231_123417 | 116848 | T | TA | frameshift_variant | HIGH | HG01175.hp1 HG01891.hp2 HG02622.hp1 others(11): Show |
a0000a0005a0011others(2): Show | a0000c0028a0005c0010a0005c0023others(3): Show | a0000c0028t0001a0005c0010t0006a0005c0010t0020others(4): Show | a0000c0028t0001g0000a0005c0010t0006g0000a0005c0010t0020g0000others(4): Show | 14 | 452 | 0.0310 | 1 | c.127 others(5): Show |
p.Leu others(5): Show |
FOXD4 | ENSG00000170122.6 | transcript | ENST00000382500.4 | protein_coding | 1/1 | 1569/2187 | 1271/1320 | 424/439 | chr9 | TogoVar | ||
FOXD4_chr9_111231_123417 | 117363 | T | TC | frameshift_variant | HIGH | HG01175.hp1 HG01891.hp2 HG02622.hp1 others(10): Show |
a0005a0011a0014others(1): Show | a0005c0010a0005c0023a0011c0019others(2): Show | a0005c0010t0006a0005c0010t0020a0005c0023t0014others(3): Show | a0005c0010t0006g0000a0005c0010t0020g0000a0005c0023t0014g0000others(3): Show | 13 | 452 | 0.0288 | 1 | c.756 others(4): Show |
p.Arg others(5): Show |
FOXD4 | ENSG00000170122.6 | transcript | ENST00000382500.4 | protein_coding | 1/1 | 1054/2187 | 756/1320 | 252/439 | chr9 | TogoVar | ||
GNRH2_chr20_3038622_3050747 | 3045699 | A | AGCCCC | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(98): Show |
a0000 | a0000c0002 | a0000c0002t0001a0000c0002t0002 | a0000c0002t0001g0002a0000c0002t0001g0005a0000c0002t0002g0002others(1): Show | 101 | 446 | 0.2265 | 5 | c.319 others(12): Show |
p.Ser others(5): Show |
GNRH2 | ENSG00000125787.11 | transcript | ENST00000359100.6 | protein_coding | 4/4 | 375/404 | 324/342 | 108/113 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |
GOLGA6L2_chr15_23434038_23452243 | 23440076 | C | CCTGGCCC others(430): Show |
frameshift_variant | HIGH | NA18988.hp2 NA19058.hp2 NA19070.hp2 |
a0001 | a0001c0019 | a0001c0019t0001a0001c0019t0003 | a0001c0019t0001g0055a0001c0019t0003g0035 | 3 | 396 | 0.0076 | 437 | c.239 others(446): Show |
p.Gly others(5): Show |
GOLGA6L2 | ENSG00000174450.13 | transcript | ENST00000567107.6 | protein_coding | 8/8 | 2460/3499 | 2398/2730 | 800/909 | chr15 | TogoVar | ||
GOLGA6L2_chr15_23434038_23452243 | 23440318 | T | TCCCGCAT others(208): Show |
frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(284): Show |
a0000a0001a0003others(22): Show | a0000c0051a0001c0001a0001c0003others(52): Show | a0000c0051t0001a0001c0001t0001a0001c0001t0003others(65): Show | a0000c0051t0001g0067a0001c0001t0001g0001a0001c0001t0001g0002others(92): Show | 287 | 396 | 0.7248 | 215 | c.215 others(224): Show |
p.Ser others(5): Show |
GOLGA6L2 | ENSG00000174450.13 | transcript | ENST00000567107.6 | protein_coding | 8/8 | 2218/3499 | 2156/2730 | 719/909 | chr15 | TogoVar | ||
GOLGA6L2_chr15_23434038_23452243 | 23440394 | CT | C | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(388): Show |
a0000a0001a0002others(27): Show | a0000c0002a0000c0004a0000c0010others(74): Show | a0000c0002t0002a0000c0002t0005a0000c0002t0011others(95): Show | a0000c0002t0002g0003a0000c0002t0002g0005a0000c0002t0002g0040others(132): Show | 391 | 396 | 0.9874 | -1 | c.208 others(5): Show |
p.Arg others(5): Show |
GOLGA6L2 | ENSG00000174450.13 | transcript | ENST00000567107.6 | protein_coding | 8/8 | 2142/3499 | 2080/2730 | 694/909 | chr15 | TogoVar | ||
GPANK1_chr6_31656228_31669997 | 31664358 | G | A | stop_gained | HIGH | NA19058.hp2 NA19059.hp2 |
a0007 | a0007c0012 | a0007c0012t0001 | a0007c0012t0001g0039 | 2 | 433 | 0.0046 | 0 | c.121 others(3): Show |
p.Arg others(3): Show |
GPANK1 | ENSG00000204438.11 | transcript | ENST00000375896.9 | protein_coding | 2/3 | 377/2365 | 121/1071 | 41/356 | chr6 | TogoVar | ||
GPR173_chrX_53043789_53085615 | 53077066 | A | AC | frameshift_variant | HIGH | NA19058.hp1 | a0009 | a0009c0011 | a0009c0011t0069 | a0009c0011t0069g0045 | 1 | 208 | 0.0048 | 1 | c.448 others(4): Show |
p.Leu others(5): Show |
GPR173 | ENSG00000184194.6 | transcript | ENST00000332582.5 | protein_coding | 2/2 | 1242/4787 | 449/1122 | 150/373 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GPR173_chrX_53043789_53085615 | 53077119 | G | GT | frameshift_variant | HIGH | NA19058.hp1 | a0009 | a0009c0011 | a0009c0011t0069 | a0009c0011t0069g0045 | 1 | 208 | 0.0048 | 1 | c.501 others(4): Show |
p.Ile others(5): Show |
GPR173 | ENSG00000184194.6 | transcript | ENST00000332582.5 | protein_coding | 2/2 | 1295/4787 | 502/1122 | 168/373 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GPR173_chrX_53043789_53085615 | 53077136 | AC | A | frameshift_variant | HIGH | NA19058.hp1 | a0009 | a0009c0011 | a0009c0011t0069 | a0009c0011t0069g0045 | 1 | 208 | 0.0048 | -1 | c.517 others(4): Show |
p.Gln others(5): Show |
GPR173 | ENSG00000184194.6 | transcript | ENST00000332582.5 | protein_coding | 2/2 | 1310/4787 | 517/1122 | 173/373 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GPR33_chr14_31477875_31493039 | 31483548 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(423): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0007others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(82): Show | 426 | 448 | 0.9509 | 0 | c.418 others(3): Show |
p.Arg others(4): Show |
GPR33 | ENSG00000214943.5 | transcript | ENST00000399285.5 | protein_coding | 2/2 | 567/1240 | 418/1002 | 140/333 | chr14 | TogoVar | ||
GRIPAP1_chrX_48968723_49007264 | 48976023 | CG | C | frameshift_variant | HIGH | NA19058.hp1 | a0006 | a0006c0010 | a0006c0010t0004 | a0006c0010t0004g0187 | 1 | 297 | 0.0034 | -1 | c.227 others(5): Show |
p.Arg others(5): Show |
GRIPAP1 | ENSG00000068400.14 | transcript | ENST00000376423.8 | protein_coding | 24/26 | 2307/3031 | 2272/2526 | 758/841 | chrX | TogoVar | ||
GSDMB_chr17_39899595_39923635 | 39908216 | T | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(122): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0004a0002c0002t0005 | a0002c0002t0001g0002a0002c0002t0001g0004a0002c0002t0001g0014others(47): Show | 125 | 400 | 0.3125 | 0 | c.662 others(5): Show |
GSDMB | ENSG00000073605.19 | transcript | ENST00000418519.6 | protein_coding | 5/10 | chr17 | TogoVar | ||||||
GUCA1C_chr3_108902792_108958879 | 108916126 | C | A | splice_donor_variant others(1): Show |
HIGH | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(107): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0002c0004others(6): Show | a0001c0001t0001a0002c0002t0001a0002c0004t0001others(6): Show | a0001c0001t0001g0052a0001c0001t0001g0118a0001c0001t0001g0120others(106): Show | 110 | 374 | 0.2941 | 0 | c.442 others(5): Show |
GUCA1C | ENSG00000138472.11 | transcript | ENST00000261047.8 | protein_coding | 3/3 | chr3 | TogoVar | ||||||
H2BW2_chrX_104034956_104047454 | 104040193 | C | T | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(109): Show |
a0002a0004 | a0002c0002a0002c0007a0004c0009 | a0002c0002t0001a0002c0002t0002a0002c0007t0001others(1): Show | a0002c0002t0001g0001a0002c0002t0001g0004a0002c0002t0001g0013others(4): Show | 112 | 332 | 0.3374 | 0 | c.199 others(3): Show |
p.Gln others(3): Show |
H2BW2 | ENSG00000101812.15 | transcript | ENST00000675318.3 | protein_coding | 1/4 | 238/870 | 199/447 | 67/148 | chrX | TogoVar | ||
HLA-A_chr6_29937532_29950870 | 29943463 | T | A | stop_gained | HIGH | HG00408.hp1 HG00423.hp1 HG00438.hp2 others(85): Show |
a0001a0004a0029others(3): Show | a0001c0001a0004c0004a0029c0027others(3): Show | a0001c0001t0002a0004c0004t0004a0029c0027t0004others(3): Show | a0001c0001t0002g0002a0001c0001t0002g0026a0001c0001t0002g0027others(7): Show | 88 | 418 | 0.2105 | 0 | c.539 others(3): Show |
p.Leu others(4): Show |
HLA-A | ENSG00000206503.14 | transcript | ENST00000376809.10 | protein_coding | 3/8 | 561/1535 | 539/1098 | 180/365 | chr6 | TogoVar | ||
HLA-B_chr6_31348875_31362179 | 31356366 | G | T | stop_gained | HIGH | HG00438.hp2 HG00621.hp2 HG01074.hp1 others(44): Show |
a0014a0018a0024others(7): Show | a0014c0014a0018c0016a0024c0023others(7): Show | a0014c0014t0010a0014c0014t0036a0018c0016t0006others(9): Show | a0014c0014t0010g0020a0014c0014t0010g0063a0014c0014t0036g0110others(13): Show | 47 | 468 | 0.1004 | 0 | c.420 others(3): Show |
p.Tyr others(4): Show |
HLA-B | ENSG00000234745.14 | transcript | ENST00000412585.7 | protein_coding | 3/8 | 441/1536 | 420/1089 | 140/362 | chr6 | TogoVar | ||
HSD17B10_chrX_53426261_53439370 | 53433812 | T | TC | frameshift_variant | HIGH | NA19058.hp1 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0017 | 1 | 280 | 0.0036 | 1 | c.101 others(4): Show |
p.Ala others(4): Show |
HSD17B10 | ENSG00000072506.14 | transcript | ENST00000168216.11 | protein_coding | 2/6 | 126/954 | 101/786 | 34/261 | chrX | TogoVar | ||
IGFN1_chr1_201185824_201233952 | 201210972 | C | CGGTCAAT others(208): Show |
frameshift_variant others(1): Show |
HIGH | NA19058.hp1 | a0093 | a0093c0064 | a0093c0064t0003 | a0093c0064t0003g0225 | 1 | 428 | 0.0023 | 215 | c.612 others(224): Show |
p.Glu others(6): Show |
IGFN1 | ENSG00000163395.17 | transcript | ENST00000335211.9 | protein_coding | 12/24 | 6255/11811 | 6124/11127 | 2042/3708 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
IL1RAPL1_chrX_28582446_29961718 | 29917568 | GA | G | frameshift_variant | HIGH | NA19058.hp1 | a0002 | a0002c0004 | a0002c0004t0002 | a0002c0004t0002g0044 | 1 | 135 | 0.0074 | -1 | c.887 others(4): Show |
p.Asn others(5): Show |
IL1RAPL1 | ENSG00000169306.11 | transcript | ENST00000378993.6 | protein_coding | 7/11 | 1513/3615 | 887/2091 | 296/696 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
IL3RA_chrX_1331785_1387689 | 1352184 | C | CG | frameshift_variant | HIGH | NA19058.hp1 | a0015 | a0015c0017 | a0015c0017t0001 | a0015c0017t0001g0004 | 1 | 115 | 0.0087 | 1 | c.388 others(4): Show |
p.Ala others(5): Show |
IL3RA | ENSG00000185291.12 | transcript | ENST00000331035.10 | protein_coding | 5/12 | 569/1541 | 389/1137 | 130/378 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
IL3RA_chrX_1331785_1387689 | 1352484 | G | GT | frameshift_variant | HIGH | NA19058.hp1 | a0015 | a0015c0017 | a0015c0017t0001 | a0015c0017t0001g0004 | 1 | 115 | 0.0087 | 1 | c.597 others(4): Show |
p.Val others(5): Show |
IL3RA | ENSG00000185291.12 | transcript | ENST00000331035.10 | protein_coding | 6/12 | 778/1541 | 598/1137 | 200/378 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
IQCA1L_chr7_151185873_151210496 | 151195597 | TC | T | frameshift_variant | HIGH | HG00408.hp2 HG00621.hp1 HG00639.hp2 others(129): Show |
a0002a0005a0008others(8): Show | a0002c0003a0002c0012a0002c0015others(26): Show | a0002c0003t0001a0002c0012t0001a0002c0015t0001others(26): Show | a0002c0003t0001g0007a0002c0003t0001g0023a0002c0003t0001g0026others(80): Show | 132 | 448 | 0.2946 | -1 | c.137 others(5): Show |
p.Glu others(5): Show |
IQCA1L | ENSG00000278685.4 | transcript | ENST00000615129.4 | protein_coding | 11/19 | 1417/2606 | 1375/2457 | 459/818 | chr7 | TogoVar | ||
ITGB2_chr21_44880953_44925899 | 44893545 | C | T | splice_acceptor_variant others(1): Show |
HIGH | NA19058.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0298 | 1 | 444 | 0.0023 | 0 | c.108 others(6): Show |
ITGB2 | ENSG00000160255.19 | transcript | ENST00000652462.1 | protein_coding | 9/15 | chr21 | TogoVar | ||||||
JAK3_chr19_17819782_17852982 | 17830179 | C | CG | frameshift_variant | HIGH | HG00544.hp2 HG01192.hp2 HG01934.hp1 others(6): Show |
a0002a0006 | a0002c0002a0002c0018a0006c0012 | a0002c0002t0001a0002c0002t0002a0002c0002t0005others(4): Show | a0002c0002t0001g0079a0002c0002t0001g0097a0002c0002t0002g0185others(6): Show | 9 | 414 | 0.0217 | 1 | c.313 others(5): Show |
p.Ala others(6): Show |
JAK3 | ENSG00000105639.21 | transcript | ENST00000458235.7 | protein_coding | 23/24 | 3185/5386 | 3135/3375 | 1045/1124 | chr19 | TogoVar | ||
KDM4A_chr1_43645149_43710518 | 43660291 | CA | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(188): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(169): Show | 191 | 370 | 0.5162 | -1 | c.315 others(6): Show |
KDM4A | ENSG00000066135.13 | transcript | ENST00000372396.4 | protein_coding | 3/21 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
KDM5C_chrX_53187158_53230207 | 53220845 | C | CT | frameshift_variant | HIGH | NA19058.hp1 | a0006 | a0006c0011 | a0006c0011t0001 | a0006c0011t0001g0013 | 1 | 241 | 0.0042 | 1 | c.221 others(4): Show |
p.Leu others(4): Show |
KDM5C | ENSG00000126012.13 | transcript | ENST00000375401.8 | protein_coding | 2/26 | 539/5810 | 221/4683 | 74/1560 | chrX | TogoVar | ||
KDM5C_chrX_53187158_53230207 | 53220851 | C | CA | frameshift_variant | HIGH | NA19058.hp1 | a0006 | a0006c0011 | a0006c0011t0001 | a0006c0011t0001g0013 | 1 | 241 | 0.0042 | 1 | c.215 others(4): Show |
p.Asn others(4): Show |
KDM5C | ENSG00000126012.13 | transcript | ENST00000375401.8 | protein_coding | 2/26 | 533/5810 | 215/4683 | 72/1560 | chrX | TogoVar | ||
KDM5C_chrX_53187158_53230207 | 53220915 | T | TC | frameshift_variant others(1): Show |
HIGH | NA19058.hp1 | a0006 | a0006c0011 | a0006c0011t0001 | a0006c0011t0001g0013 | 1 | 241 | 0.0042 | 1 | c.151 others(4): Show |
p.Asp others(4): Show |
KDM5C | ENSG00000126012.13 | transcript | ENST00000375401.8 | protein_coding | 2/26 | 469/5810 | 151/4683 | 51/1560 | chrX | TogoVar |