Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
AANAT_chr17_76462603_76475117	76472958	G G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.29 others(5): Show c.2988G>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	2841	chr17	TogoVar
AANAT_chr17_76462603_76475117	76472959	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.29 others(5): Show c.2989T>G	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	2842	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473078	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG02622.hp1 HG01099.hp2 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0009 a0002c0005t0001g0009	2	426	0.0047	0	c.31 others(5): Show c.3108G>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	2961	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473168	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG02622.hp1 HG01099.hp2 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0009 a0002c0005t0001g0009	2	426	0.0047	0	c.31 others(5): Show c.3198G>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3051	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473367	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG02280.hp2 HG04115.hp1 HG00140.hp1 HG02280.hp2 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	3	426	0.0070	0	c.33 others(5): Show c.3397G>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3250	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473440	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.34 others(5): Show c.3470G>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3323	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473442	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG02896.hp1 HG02897.hp1 others(2): Show HG01884.hp1 HG02896.hp1 HG02897.hp1 HG02970.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0002g0005 a0001c0001t0001g0001 a0001c0001t0002g0005	5	426	0.0117	0	c.34 others(5): Show c.3472C>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3325	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473452	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG02622.hp1 HG01099.hp2 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0009 a0002c0005t0001g0009	2	426	0.0047	0	c.34 others(5): Show c.3482A>G	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3335	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473457	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG02622.hp1 HG01099.hp2 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0009 a0002c0005t0001g0009	2	426	0.0047	0	c.34 others(5): Show c.3487C>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3340	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473697	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG01081.hp1 HG01433.hp1 others(2): Show HG00140.hp2 HG01081.hp1 HG01433.hp1 HG03453.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0017	5	426	0.0117	0	c.37 others(5): Show c.3727T>C	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3580	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473753	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.37 others(5): Show c.3783G>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3636	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473753	G G	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp1 HG03471.hp1 HG02922.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	426	0.0047	0	c.37 others(5): Show c.3783G>C	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3636	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473827	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG02622.hp1 HG01099.hp2 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0009 a0002c0005t0001g0009	2	426	0.0047	0	c.38 others(5): Show c.3857A>G	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3710	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473832	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp2 HG02698.hp2 HG00733.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	426	0.0047	0	c.38 others(5): Show c.3862C>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3715	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473918	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01934.hp2 HG01109.hp2 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	426	0.0047	0	c.39 others(5): Show c.3948A>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3801	chr17	TogoVar
AANAT_chr17_76462603_76475117	76473963	G G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.39 others(5): Show c.3993G>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3846	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474065	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.40 others(5): Show c.4095C>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3948	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474101	C C	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.41 others(5): Show c.4131C>G	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3984	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474112	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01515.hp1 HG01517.hp1 HG01515.hp1 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	426	0.0047	0	c.41 others(5): Show c.4142C>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	3995	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474172	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.42 others(5): Show c.4202T>C	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4055	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474174	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG02622.hp1 HG01099.hp2 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0009 a0002c0005t0001g0009	2	426	0.0047	0	c.42 others(5): Show c.4204T>C	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4057	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474239	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.42 others(5): Show c.4269A>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4122	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474296	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01361.hp2 HG02109.hp2 HG02145.hp1 others(1): Show HG01361.hp2 HG02109.hp2 HG02145.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	4	426	0.0094	0	c.43 others(5): Show c.4326G>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4179	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474435	A A	AGTCCCGC others(108): Show AGTCCCGCTCCAGGTCGCCCCCCTTGAGCCTCCGCGCCCCCGCTCCGCCC GCCAGGGCCCCGCCGCCCCCACTGCGCTCCCCCCGCCCCCGCCTGCCTCG CCCCACTCGGACCGGG	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	426	0.0024	115	c.44 others(126): Show c.4465_*4466insGTCCCGCTCCAGGTCGCCCCCCTTGAGCCTCCGC GCCCCCGCTCCGCCCGCCAGGGCCCCGCCGCCCCCACTGCGCTCCCCCCG CCCCCGCCTGCCTCGCCCCACTCGGACCGGG	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4319	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474457	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	1	426	0.0024	0	c.44 others(5): Show c.4487G>A	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4340	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474457	G G	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp2 HG02622.hp1 HG01099.hp2 HG02622.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0009 a0002c0005t0001g0009	2	426	0.0047	0	c.44 others(5): Show c.4487G>T	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4340	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474621	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18992.hp1 NA18992.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	426	0.0024	0	c.46 others(5): Show c.4651T>C	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4504	chr17	TogoVar
AANAT_chr17_76462603_76475117	76474931	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	426	0.0024	0	c.49 others(5): Show c.4961T>C	AANAT	ENSG00000129673.10	transcript	ENST00000392492.8	protein_coding	4814	chr17	TogoVar
AAR2_chr20_36231478_36261933	36257144	A A	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0032 a0001c0002t0001g0032	1	298	0.0034	0	c.13 others(5): Show c.1399A>C	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	211	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257342	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0011 a0001c0002t0011	a0001c0002t0011g0166 a0001c0002t0011g0166	1	298	0.0034	0	c.15 others(5): Show c.1597G>A	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	409	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257348	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18966.hp1 NA18989.hp2 NA19063.hp2 NA18966.hp1 NA18989.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0060 a0001c0001t0001g0143 a0001c0001t0001g0013 a0001c0001t0001g0060 a0001c0001t0001g0143	3	298	0.0101	0	c.16 others(5): Show c.1603T>C	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	415	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257391	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG03139.hp2 NA18906.hp1 HG02922.hp2 HG03139.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0007 a0001c0001t0001 a0001c0002t0007	a0001c0001t0001g0012 a0001c0001t0001g0145 a0001c0002t0007g0170 a0001c0001t0001g0012 a0001c0001t0001g0145 a0001c0002t0007g0170	3	298	0.0101	0	c.16 others(5): Show c.1646G>A	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	458	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257568	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0089	1	298	0.0034	0	c.18 others(5): Show c.1823G>A	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	635	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257577	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp2 HG02559.hp1 HG02630.hp2 others(2): Show HG02486.hp2 HG02559.hp1 HG02630.hp2 HG03225.hp1 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0002 a0001c0004t0005 a0001c0002t0002 a0001c0004t0005	a0001c0002t0002g0036 a0001c0002t0002g0184 a0001c0004t0005g0033 others(1): Show a0001c0002t0002g0036 a0001c0002t0002g0184 a0001c0004t0005g0033 a0001c0004t0005g0146	5	298	0.0168	0	c.18 others(5): Show c.1832T>C	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	644	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257593	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0149 a0001c0002t0002g0149	1	298	0.0034	0	c.18 others(5): Show c.1848A>G	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	660	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257606	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0190 a0001c0002t0002g0190	1	298	0.0034	0	c.18 others(5): Show c.1861G>A	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	673	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257640	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0036 a0001c0002t0002g0036	1	298	0.0034	0	c.18 others(5): Show c.1895C>A	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	707	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257705	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp2 HG03225.hp1 NA18522.hp2 HG02630.hp2 HG03225.hp1 NA18522.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0033 a0001c0004t0005g0146 a0001c0004t0005g0033 a0001c0004t0005g0146	3	298	0.0101	0	c.19 others(5): Show c.1960G>A	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	772	chr20	TogoVar
AAR2_chr20_36231478_36261933	36257841	AAAG AAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00423.hp1 HG00544.hp1 others(65): Show HG00099.hp1 HG00423.hp1 HG00544.hp1 HG00558.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01109.hp2 HG01167.hp1 HG01175.hp1 HG01256.hp2 HG01257.hp1 HG01346.hp2 HG01891.hp1 HG01952.hp2 HG02004.hp2 HG02027.hp2 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp1 HG02148.hp2 HG02257.hp1 HG02258.hp2 HG02451.hp2 HG02698.hp1 HG02735.hp2 HG02965.hp2 HG02970.hp1 HG03139.hp2 HG03225.hp2 HG03453.hp2 HG03471.hp2 HG03491.hp1 HG03831.hp2 NA18747.hp1 NA18906.hp1 NA18939.hp1 NA18947.hp2 NA18949.hp1 NA18950.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18957.hp2 NA18959.hp1 NA18966.hp2 NA18969.hp2 NA18977.hp2 NA18983.hp2 NA18984.hp2 NA18993.hp1 NA18999.hp2 NA19007.hp2 NA19011.hp2 NA19064.hp1 NA19079.hp2 NA19081.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp1 NA20300.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0006 a0003c0009 a0001c0001 a0002c0006 a0003c0009	a0001c0001t0001 a0002c0006t0001 a0003c0009t0010 a0001c0001t0001 a0002c0006t0001 a0003c0009t0010	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0012 others(43): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0063 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0138 a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0163 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0002c0006t0001g0004 a0003c0009t0010g0164	68	298	0.2282	-3	c.20 others(14): Show c.2097_*2099delAAG	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	909	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258011	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01433.hp1 HG01952.hp1 HG01981.hp1 others(8): Show HG01433.hp1 HG01952.hp1 HG01981.hp1 NA18952.hp2 NA18966.hp1 NA18989.hp2 NA18991.hp2 NA18994.hp2 NA19005.hp2 NA19057.hp1 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0042 others(5): Show a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0143	11	298	0.0369	0	c.22 others(5): Show c.2266G>A	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1078	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258028	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG02056.hp2 HG02083.hp1 others(2): Show HG00609.hp2 HG02056.hp2 HG02083.hp1 NA19001.hp1 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0050 a0001c0001t0001g0057 others(1): Show a0001c0001t0001g0024 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0071	5	298	0.0168	0	c.22 others(5): Show c.2283T>C	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1095	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TAC TAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG00558.hp2 others(69): Show HG00423.hp1 HG00423.hp2 HG00558.hp2 HG00639.hp1 HG00642.hp1 HG00673.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01175.hp1 HG01257.hp1 HG01346.hp2 HG01516.hp1 HG01517.hp2 HG01934.hp2 HG01952.hp2 HG02004.hp2 HG02056.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02258.hp2 HG02486.hp1 HG02630.hp2 HG02698.hp1 HG02922.hp2 HG02976.hp1 HG03017.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03491.hp1 HG03704.hp1 HG03831.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18939.hp1 NA18947.hp2 NA18949.hp1 NA18951.hp2 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18956.hp2 NA18957.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18972.hp2 NA18977.hp1 NA18977.hp2 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18993.hp1 NA18994.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp2 NA19011.hp2 NA19064.hp1 NA19064.hp2 NA19077.hp2 NA19081.hp2 NA19087.hp2 NA19088.hp1 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0003c0009	a0001c0001t0001 a0001c0001t0008 a0001c0002t0002 others(3): Show a0001c0001t0001 a0001c0001t0008 a0001c0002t0002 a0001c0002t0007 a0001c0004t0005 a0003c0009t0010	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(54): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0047 a0001c0001t0001g0054 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0070 a0001c0001t0001g0078 a0001c0001t0001g0080 a0001c0001t0001g0083 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0137 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0168 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0008g0009 a0001c0002t0002g0130 a0001c0002t0007g0170 a0001c0004t0005g0033 a0001c0004t0005g0146 a0003c0009t0010g0164	72	298	0.2416	2	c.23 others(13): Show c.2397_*2398insAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TACAC TACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00280.hp1 others(100): Show HG00099.hp1 HG00099.hp2 HG00280.hp1 HG00544.hp1 HG00558.hp1 HG00609.hp1 HG00609.hp2 HG00733.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01256.hp2 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02083.hp1 HG02135.hp1 HG02145.hp1 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp2 HG03491.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03834.hp1 HG04199.hp1 HG04228.hp1 NA18747.hp2 NA18939.hp2 NA18947.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18959.hp1 NA18959.hp2 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18972.hp1 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18984.hp1 NA18989.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp2 NA18994.hp1 NA18999.hp1 NA18999.hp2 NA19002.hp2 NA19005.hp1 NA19007.hp1 NA19011.hp1 NA19057.hp1 NA19063.hp1 NA19063.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19085.hp1 NA19085.hp2 NA19088.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0002t0001 a0001c0002t0002 a0001c0002t0007 a0001c0003t0001 a0001c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(72): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0027 a0001c0001t0001g0042 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0091 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0106 a0001c0001t0001g0110 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0138 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0150 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0172 a0001c0001t0001g0188 a0001c0001t0003g0001 a0001c0001t0003g0076 a0001c0001t0003g0101 a0001c0001t0006g0011 a0001c0002t0001g0161 a0001c0002t0002g0005 a0001c0002t0002g0036 a0001c0002t0002g0075 a0001c0002t0002g0132 a0001c0002t0002g0184 a0001c0002t0007g0171 a0001c0003t0001g0017 a0001c0003t0001g0044 a0001c0003t0001g0056 a0001c0005t0001g0009	103	298	0.3456	4	c.23 others(15): Show c.2397_*2398insACAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TACACAC TACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG00738.hp2 HG01167.hp1 others(46): Show HG00639.hp2 HG00738.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01361.hp2 HG01433.hp2 HG01993.hp1 HG02083.hp2 HG02148.hp1 HG02257.hp1 HG02273.hp2 HG02622.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp1 HG02895.hp1 HG02970.hp2 HG03017.hp2 HG03041.hp2 HG03471.hp2 HG03486.hp1 HG03516.hp1 HG03516.hp2 HG04199.hp2 HG04228.hp2 NA18522.hp1 NA18906.hp2 NA18943.hp1 NA18943.hp2 NA18953.hp2 NA18957.hp1 NA18978.hp1 NA18978.hp2 NA18989.hp1 NA19001.hp1 NA19001.hp2 NA19030.hp2 NA19057.hp2 NA19079.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp2 NA19240.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(31): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0048 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0064 a0001c0001t0001g0073 a0001c0001t0001g0084 a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0104 a0001c0001t0001g0107 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0123 a0001c0001t0001g0135 a0001c0001t0001g0189 a0001c0001t0003g0001 a0001c0001t0003g0077 a0001c0001t0003g0092 a0001c0001t0012g0069 a0001c0002t0001g0006 a0001c0002t0001g0035 a0001c0002t0002g0005 a0001c0002t0002g0088 a0001c0002t0002g0129 a0001c0002t0002g0131 a0001c0002t0002g0134	49	298	0.1644	6	c.23 others(17): Show c.2397_*2398insACACAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TACACACA others(1): Show TACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp2 HG01361.hp1 HG02004.hp1 others(10): Show HG01106.hp2 HG01361.hp1 HG02004.hp1 HG02027.hp2 HG02109.hp2 HG02257.hp2 HG02572.hp1 HG02622.hp2 HG02886.hp2 HG03130.hp2 HG03209.hp2 HG03453.hp2 HG03834.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0007 a0001c0001 a0001c0002 a0001c0007	a0001c0001t0001 a0001c0001t0009 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0007t0002	a0001c0001t0001g0018 a0001c0001t0001g0081 a0001c0001t0001g0103 others(9): Show a0001c0001t0001g0018 a0001c0001t0001g0081 a0001c0001t0001g0103 a0001c0001t0001g0109 a0001c0001t0001g0173 a0001c0001t0009g0151 a0001c0002t0001g0006 a0001c0002t0002g0031 a0001c0002t0002g0133 a0001c0002t0002g0148 a0001c0002t0002g0165 a0001c0007t0002g0191	13	298	0.0436	8	c.23 others(19): Show c.2397_*2398insACACACAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TACACACA others(3): Show TACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG02280.hp1 HG02451.hp1 others(2): Show HG01192.hp1 HG02280.hp1 HG02451.hp1 HG02572.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0152 a0001c0002t0001g0032 a0001c0002t0002g0037 others(1): Show a0001c0001t0001g0152 a0001c0002t0001g0032 a0001c0002t0002g0037 a0001c0002t0002g0149	5	298	0.0168	10	c.23 others(21): Show c.2397_*2398insACACACACAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TACACACA others(5): Show TACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp1 HG01261.hp2 HG02809.hp1 others(4): Show HG01081.hp1 HG01261.hp2 HG02809.hp1 HG03041.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0079 a0001c0002t0001g0006 a0001c0002t0001g0035 others(4): Show a0001c0001t0001g0079 a0001c0002t0001g0006 a0001c0002t0001g0035 a0001c0002t0001g0178 a0001c0002t0001g0180 a0001c0002t0001g0181 a0001c0002t0001g0182	7	298	0.0235	12	c.23 others(23): Show c.2397_*2398insACACACACACAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TACACACA others(7): Show TACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 NA18956.hp1 HG03130.hp1 NA18956.hp1	a0001 a0004 a0001 a0004	a0001c0002 a0004c0008 a0001c0002 a0004c0008	a0001c0002t0002 a0004c0008t0001 a0001c0002t0002 a0004c0008t0001	a0001c0002t0002g0147 a0004c0008t0001g0119 a0001c0002t0002g0147 a0004c0008t0001g0119	2	298	0.0067	14	c.23 others(25): Show c.2397_*2398insACACACACACACAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	T T	TACACACA others(11): Show TACACACACACACACACAC	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0179 a0001c0002t0001g0179	1	298	0.0034	18	c.23 others(29): Show c.2397_*2398insACACACACACACACACAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar
AAR2_chr20_36231478_36261933	36258142	TAC TAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG01884.hp1 HG02559.hp2 others(6): Show HG00544.hp2 HG01884.hp1 HG02559.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG03471.hp1 HG03831.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0002t0004 a0001c0001t0001 a0001c0002t0002 a0001c0002t0004	a0001c0001t0001g0001 a0001c0001t0001g0112 a0001c0001t0001g0141 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0112 a0001c0001t0001g0141 a0001c0002t0002g0036 a0001c0002t0002g0190 a0001c0002t0004g0028 a0001c0002t0004g0030	9	298	0.0302	-2	c.23 others(13): Show c.2398_*2399delAC	AAR2	ENSG00000131043.13	transcript	ENST00000320849.9	protein_coding	1210	chr20	TogoVar

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