view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EPPK1_chr8_143852324_143883467 | 143865718 | G | GTCTGGGC others(1599): Show |
frameshift_variant | HIGH | HG02055.hp1 | a0084 | a0084c0080 | a0084c0080t0007 | a0084c0080t0007g0199 | 1 | 287 | 0.0035 | 1606 | c.753 others(1615): Show |
p.Asp others(6): Show |
EPPK1 | ENSG00000261150.3 | transcript | ENST00000615648.2 | protein_coding | 2/2 | 7610/16005 | 7535/15267 | 2512/5088 | chr8 | TogoVar | |||
FAM187B_chr19_35219800_35233739 | 35228117 | C | T | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(123): Show |
a0002a0007 | a0002c0002a0002c0005a0002c0006others(3): Show | a0002c0002t0001a0002c0002t0002a0002c0005t0001others(4): Show | a0002c0002t0001g0002 a0002c0002t0002g0018 a0002c0005t0001g0006 others(7): Show |
126 | 448 | 0.2813 | 0 | c.564 others(3): Show |
p.Trp others(4): Show |
FAM187B | ENSG00000177558.4 | transcript | ENST00000324675.4 | protein_coding | 1/2 | 623/1194 | 564/1110 | 188/369 | chr19 | TogoVar | |||
FAM193A_chr4_2531647_2737573 | 2536987 | C | CG | frameshift_variant | HIGH | HG00544.hp2 HG00741.hp2 HG01099.hp1 others(9): Show |
a0002 | a0002c0006a0002c0011a0002c0012others(2): Show | a0002c0006t0001a0002c0006t0002a0002c0006t0017others(4): Show | a0002c0006t0001g0242 a0002c0006t0001g0268 a0002c0006t0001g0285 others(9): Show |
12 | 328 | 0.0366 | 1 | c.77d others(3): Show |
p.Asn others(4): Show |
FAM193A | ENSG00000125386.16 | transcript | ENST00000637812.2 | protein_coding | 1/21 | 347/5522 | 78/4548 | 26/1515 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||
FAM240B_chr9_38689266_38725133 | 38703900 | G | A | stop_gained | HIGH | HG02055.hp1 | a0004 | a0004c0004 | a0004c0004t0002 | a0004c0004t0002g0287 | 1 | 464 | 0.0022 | 0 | c.100 others(3): Show |
p.Arg others(3): Show |
FAM240B | ENSG00000283329.2 | transcript | ENST00000637493.2 | protein_coding | 2/3 | 215/862 | 100/237 | 34/78 | chr9 | TogoVar | |||
FAM90A10_chr8_7763977_7776988 | 7770362 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00140.hp2 HG00280.hp2 HG00438.hp1 others(41): Show |
a0003a0005a0009others(16): Show | a0003c0003a0005c0005a0009c0021others(18): Show | a0003c0003t0001a0005c0005t0001a0009c0021t0001others(18): Show | a0003c0003t0001g0001 a0003c0003t0001g0027 a0005c0005t0001g0004 others(19): Show |
44 | 126 | 0.3492 | 0 | c.432 others(5): Show |
FAM90A10 | ENSG00000285950.1 | transcript | ENST00000533716.2 | protein_coding | 3/3 | chr8 | TogoVar | |||||||
FAM90A16_chr8_7725739_7738749 | 7732124 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00558.hp1 HG00558.hp2 HG00673.hp1 others(52): Show |
a0001a0002a0003others(26): Show | a0001c0003a0001c0006a0001c0029others(30): Show | a0001c0003t0001a0001c0006t0001a0001c0029t0001others(30): Show | a0001c0003t0001g0006 a0001c0003t0001g0011 a0001c0003t0001g0026 others(41): Show |
55 | 70 | 0.7857 | 0 | c.432 others(5): Show |
FAM90A16 | ENSG00000285620.1 | transcript | ENST00000648174.1 | protein_coding | 3/3 | chr8 | TogoVar | |||||||
FANCM_chr14_45130930_45205890 | 45185207 | TCTTA | T | splice_acceptor_variant others(2): Show |
HIGH | HG00280.hp1 HG00323.hp1 HG00558.hp1 others(111): Show |
a0002a0003a0004others(16): Show | a0002c0003a0002c0006a0002c0007others(22): Show | a0002c0003t0001a0002c0003t0002a0002c0006t0002others(24): Show | a0002c0003t0001g0014 a0002c0003t0001g0165 a0002c0003t0001g0166 others(107): Show |
114 | 236 | 0.4831 | -4 | c.451 others(17): Show |
FANCM | ENSG00000187790.12 | transcript | ENST00000267430.10 | protein_coding | 17/22 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
FBRSL1_chr12_132485151_132590188 | 132583374 | G | GC | frameshift_variant | HIGH | HG00423.hp1 HG00438.hp2 HG01109.hp2 others(30): Show |
a0005a0007a0013others(9): Show | a0005c0052a0005c0054a0007c0022others(17): Show | a0005c0052t0005a0005c0054t0001a0007c0022t0002others(23): Show | a0005c0052t0005g0090 a0005c0054t0001g0069 a0007c0022t0002g0115 others(30): Show |
33 | 346 | 0.0954 | 1 | c.261 others(5): Show |
p.Ala others(5): Show |
FBRSL1 | ENSG00000112787.14 | transcript | ENST00000680143.1 | protein_coding | 19/19 | 3031/4839 | 2611/3009 | 871/1002 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||
FBRSL1_chr12_132485151_132590188 | 132583509 | G | GC | frameshift_variant | HIGH | HG00408.hp2 HG00597.hp2 HG00642.hp1 others(41): Show |
a0004a0005a0011others(10): Show | a0004c0015a0004c0020a0004c0030others(20): Show | a0004c0015t0001a0004c0015t0003a0004c0015t0007others(28): Show | a0004c0015t0001g0014 a0004c0015t0003g0050 a0004c0015t0007g0080 others(41): Show |
44 | 346 | 0.1272 | 1 | c.274 others(5): Show |
p.Ala others(5): Show |
FBRSL1 | ENSG00000112787.14 | transcript | ENST00000680143.1 | protein_coding | 19/19 | 3166/4839 | 2746/3009 | 916/1002 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||
FBXW8_chr12_116905950_117036148 | 116911140 | CGGGCTCG others(12): Show |
C | frameshift_variant | HIGH | HG02055.hp2 | a0007 | a0007c0012 | a0007c0012t0018 | a0007c0012t0018g0012 | 1 | 288 | 0.0035 | -19 | c.110 others(26): Show |
p.Arg others(4): Show |
FBXW8 | ENSG00000174989.13 | transcript | ENST00000652555.1 | protein_coding | 1/11 | 198/4861 | 110/1797 | 37/598 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||
FMN2_chr1_240086883_240480187 | 240207539 | A | AC | frameshift_variant | HIGH | HG00621.hp1 HG00621.hp2 HG00738.hp1 others(13): Show |
a0014a0023a0031others(10): Show | a0014c0091a0014c0092a0014c0093others(13): Show | a0014c0091t0003a0014c0092t0001a0014c0093t0006others(13): Show | a0014c0091t0003g0120 a0014c0092t0001g0107 a0014c0093t0006g0138 others(13): Show |
16 | 164 | 0.0976 | 1 | c.273 others(5): Show |
p.Pro others(5): Show |
FMN2 | ENSG00000155816.21 | transcript | ENST00000319653.14 | protein_coding | 5/18 | 2960/6429 | 2733/5169 | 911/1722 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||
FMNL2_chr2_152330174_152654826 | 152619552 | G | GCCAC | frameshift_variant | HIGH | HG00438.hp1 HG00438.hp2 HG00735.hp1 others(72): Show |
a0002a0003a0007 | a0002c0002a0002c0004a0002c0007others(13): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(32): Show | a0002c0002t0001g0002 a0002c0002t0001g0021 a0002c0002t0001g0033 others(72): Show |
75 | 76 | 0.9868 | 4 | c.167 others(13): Show |
p.Pro others(5): Show |
FMNL2 | ENSG00000157827.20 | transcript | ENST00000288670.14 | protein_coding | 15/26 | 2104/5630 | 1674/3279 | 558/1092 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||
FOLR3_chr11_72130725_72144892 | 72139110 | CTA | C | frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(332): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(7): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0010 others(24): Show |
335 | 382 | 0.8770 | -2 | c.320 others(9): Show |
p.Tyr others(5): Show |
FOLR3 | ENSG00000110203.10 | transcript | ENST00000611028.3 | protein_coding | 3/5 | 370/849 | 320/738 | 107/245 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||
FOXD4L3_chr9_68297867_68310084 | 68303731 | C | A | stop_gained | HIGH | HG00621.hp2 HG01168.hp1 HG01169.hp1 others(7): Show |
a0004a0006 | a0004c0005a0004c0007a0006c0016 | a0004c0005t0001a0004c0005t0005a0004c0007t0001others(1): Show | a0004c0005t0001g0000 a0004c0005t0005g0000 a0004c0007t0001g0000 others(1): Show |
10 | 174 | 0.0575 | 0 | c.780 others(3): Show |
p.Tyr others(4): Show |
FOXD4L3 | ENSG00000187559.6 | transcript | ENST00000342833.4 | protein_coding | 1/1 | 865/2218 | 780/1254 | 260/417 | chr9 | TogoVar | |||
FSIP2_chr2_185733804_185838290 | 185801624 | C | G | stop_gained | HIGH | HG02055.hp2 | a0038 | a0038c0070 | a0038c0070t0001 | a0038c0070t0001g0271 | 1 | 368 | 0.0027 | 0 | c.123 others(5): Show |
p.Tyr others(5): Show |
FSIP2 | ENSG00000188738.16 | transcript | ENST00000424728.6 | protein_coding | 17/23 | 12409/20879 | 12318/20724 | 4106/6907 | chr2 | TogoVar | |||
GARIN2_chr14_67184440_67228940 | 67204765 | C | CT | frameshift_variant | HIGH | HG01081.hp2 HG01106.hp2 HG01167.hp1 others(2): Show |
a0003 | a0003c0006 | a0003c0006t0001 | a0003c0006t0001g0182 a0003c0006t0001g0234 a0003c0006t0001g0236 others(2): Show |
5 | 330 | 0.0152 | 1 | c.588 others(8): Show |
p.Thr others(5): Show |
GARIN2 | ENSG00000172717.17 | transcript | ENST00000696955.1 | protein_coding | 5/8 | 832/1620 | 589/1254 | 197/417 | chr14 | TogoVar | |||
GGACT_chr13_100525180_100593789 | 100588740 | C | T | splice_donor_variant others(1): Show |
HIGH | HG01891.hp2 HG02055.hp2 HG02451.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0039 a0001c0001t0004g0040 a0001c0001t0004g0041 others(9): Show |
12 | 374 | 0.0321 | 0 | c.-18 others(6): Show |
GGACT | ENSG00000134864.11 | transcript | ENST00000683975.1 | protein_coding | 1/2 | chr13 | TogoVar | |||||||
GHR_chr5_42418439_42726878 | 42628209 | TTTATATG others(2672): Show |
T | exon_loss_variant others(4): Show |
HIGH | HG00280.hp2 HG00423.hp2 HG00621.hp2 others(86): Show |
a0001 | a0001c0001a0001c0004a0001c0008others(2): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(22): Show | a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0021 others(86): Show |
89 | 208 | 0.4279 | -2679 | c.71- others(15): Show |
GHR | ENSG00000112964.14 | transcript | ENST00000230882.9 | protein_coding | 3/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
GJB7_chr6_87277980_87334278 | 87323031 | TGCTTTTT others(80): Show |
T | splice_acceptor_variant others(3): Show |
HIGH | HG01891.hp2 HG02055.hp1 HG02572.hp1 others(13): Show |
a0001a0003a0005others(1): Show | a0001c0001a0003c0003a0005c0005others(1): Show | a0001c0001t0006a0001c0001t0012a0003c0003t0008others(2): Show | a0001c0001t0006g0004 a0001c0001t0006g0054 a0001c0001t0006g0056 others(5): Show |
16 | 380 | 0.0421 | -87 | c.-20 others(99): Show |
GJB7 | ENSG00000164411.12 | transcript | ENST00000525899.6 | protein_coding | 2/3 | 38120 | chr6 | TogoVar | ||||||
GOLGA6L2_chr15_23434038_23452243 | 23440076 | C | CCTGGCCC others(430): Show |
frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(212): Show |
a0001a0006a0015others(8): Show | a0001c0001a0001c0014a0001c0023others(15): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(22): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0020 others(43): Show |
215 | 306 | 0.7026 | 437 | c.239 others(446): Show |
p.Gly others(5): Show |
GOLGA6L2 | ENSG00000174450.13 | transcript | ENST00000567107.6 | protein_coding | 8/8 | 2460/3499 | 2398/2730 | 800/909 | chr15 | TogoVar | |||
GOLGA6L2_chr15_23434038_23452243 | 23440318 | T | TCCCGCAT others(208): Show |
frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(283): Show |
a0001a0003a0006others(19): Show | a0001c0001a0001c0005a0001c0010others(44): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(55): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0020 others(82): Show |
286 | 393 | 0.7277 | 215 | c.215 others(224): Show |
p.Ser others(5): Show |
GOLGA6L2 | ENSG00000174450.13 | transcript | ENST00000567107.6 | protein_coding | 8/8 | 2218/3499 | 2156/2730 | 719/909 | chr15 | TogoVar | |||
GOLGA6L2_chr15_23434038_23452243 | 23440394 | CT | C | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(387): Show |
a0001a0002a0003others(31): Show | a0001c0001a0001c0005a0001c0010others(59): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(82): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0020 others(119): Show |
390 | 394 | 0.9898 | -1 | c.208 others(5): Show |
p.Arg others(5): Show |
GOLGA6L2 | ENSG00000174450.13 | transcript | ENST00000567107.6 | protein_coding | 8/8 | 2142/3499 | 2080/2730 | 694/909 | chr15 | TogoVar | |||
GOLGA8G_chr15_28514611_28537971 | 28521486 | AGCTTTCC others(4921): Show |
A | exon_loss_variant | HIGH | HG02055.hp1 HG02145.hp1 HG02809.hp2 others(2): Show |
a0003 | a0003c0003a0003c0014 | a0003c0003t0004a0003c0003t0008a0003c0014t0004 | a0003c0003t0004g0005 a0003c0003t0008g0021 a0003c0014t0004g0020 |
5 | 100 | 0.0500 | -4928 | c.101 others(10): Show |
GOLGA8G | ENSG00000183629.14 | transcript | ENST00000525590.3 | protein_coding | 18/19 | 3095/4971 | chr15 | TogoVar | ||||||
GPRC6A_chr6_116787085_116834083 | 116792598 | A | AGGT | stop_gained others(1): Show |
HIGH | HG00099.hp1 HG00741.hp2 HG01074.hp2 others(57): Show |
a0003a0005a0010others(1): Show | a0003c0003a0005c0005a0005c0015others(3): Show | a0003c0003t0001a0005c0005t0001a0005c0015t0001others(3): Show | a0003c0003t0001g0006 a0003c0003t0001g0008 a0003c0003t0001g0011 others(35): Show |
60 | 366 | 0.1639 | 3 | c.232 others(12): Show |
p.Tyr others(15): Show |
GPRC6A | ENSG00000173612.10 | transcript | ENST00000310357.8 | protein_coding | 6/6 | 2394/2908 | 2324/2781 | 775/926 | chr6 | TogoVar | |||
GSDMB_chr17_39899595_39923635 | 39908216 | T | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(122): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0004a0002c0002t0005 | a0002c0002t0001g0002 a0002c0002t0001g0004 a0002c0002t0001g0014 others(47): Show |
125 | 398 | 0.3141 | 0 | c.662 others(5): Show |
GSDMB | ENSG00000073605.19 | transcript | ENST00000418519.6 | protein_coding | 5/10 | chr17 | TogoVar | |||||||
GSTM1_chr1_109682817_109698745 | 109683926 | ATTCCACA others(14812): Show |
A | transcript_ablation | HIGH | HG02055.hp2 HG02257.hp1 HG02258.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 21 | 270 | 0.0778 | -14819 | c.-39 others(11): Show |
p.0? | GSTM1 | ENSG00000134184.13 | transcript | ENST00000309851.10 | protein_coding | 8/8 | chr1 | TogoVar | ||||||
GSTO1_chr10_104249892_104272455 | 104263071 | AGAG | A | frameshift_variant others(3): Show |
HIGH | HG00738.hp1 HG01069.hp2 HG01071.hp2 others(15): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0004 a0003c0003t0001g0071 a0003c0003t0001g0081 |
18 | 376 | 0.0479 | -3 | c.464 others(12): Show |
p.Glu others(5): Show |
GSTO1 | ENSG00000148834.13 | transcript | ENST00000369713.10 | protein_coding | 4/6 | 501/813 | 464/726 | 155/241 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||
GUCA1C_chr3_108902792_108958879 | 108916126 | C | A | splice_donor_variant others(1): Show |
HIGH | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(107): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0002c0004others(6): Show | a0001c0001t0001a0002c0002t0001a0002c0004t0001others(6): Show | a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0074 others(106): Show |
110 | 372 | 0.2957 | 0 | c.442 others(5): Show |
GUCA1C | ENSG00000138472.11 | transcript | ENST00000261047.8 | protein_coding | 3/3 | chr3 | TogoVar | |||||||
H1-8_chr3_129538175_129556467 | 129547457 | A | AC | frameshift_variant | HIGH | HG01109.hp2 HG01175.hp2 HG01433.hp2 others(12): Show |
a0005a0010 | a0005c0007a0005c0017a0005c0018others(3): Show | a0005c0007t0001a0005c0007t0003a0005c0017t0001others(4): Show | a0005c0007t0001g0001 a0005c0007t0001g0002 a0005c0007t0001g0015 others(8): Show |
15 | 420 | 0.0357 | 1 | c.161 others(4): Show |
p.Val others(4): Show |
H1-8 | ENSG00000178804.8 | transcript | ENST00000324382.7 | protein_coding | 2/5 | 206/1212 | 162/1041 | 54/346 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||
HECTD4_chr12_112155195_112387431 | 112185241 | G | GC | frameshift_variant | HIGH | HG01175.hp1 HG01433.hp1 HG01934.hp1 others(19): Show |
a0002a0015 | a0002c0004a0002c0005a0002c0006others(2): Show | a0002c0004t0001a0002c0004t0003a0002c0004t0004others(6): Show | a0002c0004t0001g0155 a0002c0004t0003g0008 a0002c0004t0003g0015 others(19): Show |
22 | 267 | 0.0824 | 1 | c.972 others(5): Show |
p.Ala others(6): Show |
HECTD4 | ENSG00000173064.14 | transcript | ENST00000682272.1 | protein_coding | 61/76 | 10027/15752 | 9724/13257 | 3242/4418 | chr12 | TogoVar | |||
HIBCH_chr2_190198920_190324826 | 190319749 | A | G | start_lost | HIGH | HG00280.hp2 HG00323.hp1 HG00408.hp2 others(100): Show |
a0003 | a0003c0003a0003c0004a0003c0009 | a0003c0003t0002a0003c0003t0003a0003c0003t0005others(8): Show | a0003c0003t0002g0179 a0003c0003t0002g0195 a0003c0003t0002g0197 others(97): Show |
103 | 366 | 0.2814 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
HIBCH | ENSG00000198130.16 | transcript | ENST00000359678.10 | protein_coding | 1/14 | 78/2434 | 2/1161 | 1/386 | chr2 | TogoVar | |||
HID1_chr17_74945742_74977759 | 74963082 | C | A | splice_acceptor_variant others(1): Show |
HIGH | HG02055.hp2 HG02622.hp2 HG02630.hp1 others(8): Show |
a0001 | a0001c0001a0001c0006a0001c0019 | a0001c0001t0001a0001c0006t0001a0001c0019t0002 | a0001c0001t0001g0188 a0001c0006t0001g0020 a0001c0006t0001g0021 others(3): Show |
11 | 362 | 0.0304 | 0 | c.388 others(5): Show |
HID1 | ENSG00000167861.16 | transcript | ENST00000425042.7 | protein_coding | 3/18 | chr17 | TogoVar | |||||||
HLA-A_chr6_29937532_29950870 | 29943450 | G | T | stop_gained | HIGH | HG01884.hp2 HG02055.hp1 HG02280.hp2 others(10): Show |
a0013 | a0013c0011 | a0013c0011t0006 | a0013c0011t0006g0009 a0013c0011t0006g0024 |
13 | 402 | 0.0323 | 0 | c.526 others(3): Show |
p.Glu others(4): Show |
HLA-A | ENSG00000206503.14 | transcript | ENST00000376809.10 | protein_coding | 3/8 | 548/1535 | 526/1098 | 176/365 | chr6 | TogoVar | |||
HLA-DPB1_chr6_33070990_33094696 | 33080689 | G | T | stop_gained | HIGH | HG00280.hp1 HG00323.hp1 HG00673.hp1 others(113): Show |
a0006a0007a0009others(13): Show | a0006c0008a0006c0010a0006c0037others(15): Show | a0006c0008t0003a0006c0008t0012a0006c0010t0003others(18): Show | a0006c0008t0003g0009 a0006c0008t0003g0013 a0006c0008t0003g0070 others(31): Show |
116 | 454 | 0.2555 | 0 | c.118 others(3): Show |
p.Gly others(3): Show |
HLA-DPB1 | ENSG00000223865.11 | transcript | ENST00000418931.7 | protein_coding | 2/6 | 170/3991 | 118/777 | 40/258 | chr6 | TogoVar | |||
HLA-DRB1_chr6_32573775_32594848 | 32584364 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(128): Show |
a0002a0003a0005others(20): Show | a0002c0002a0003c0003a0005c0008others(21): Show | a0002c0002t0005a0003c0003t0002a0005c0008t0006others(22): Show | a0002c0002t0005g0005 a0002c0002t0005g0011 a0002c0002t0005g0017 others(53): Show |
131 | 203 | 0.6453 | 0 | c.115 others(3): Show |
p.Gln others(3): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 2/6 | 221/1223 | 115/801 | 39/266 | chr6 | TogoVar | |||
HLA-DRB1_chr6_32573775_32594848 | 32584366 | C | T | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(133): Show |
a0002a0003a0005others(21): Show | a0002c0002a0003c0003a0005c0008others(22): Show | a0002c0002t0005a0003c0003t0002a0005c0008t0006others(23): Show | a0002c0002t0005g0005 a0002c0002t0005g0011 a0002c0002t0005g0017 others(54): Show |
136 | 208 | 0.6538 | 0 | c.113 others(3): Show |
p.Trp others(3): Show |
HLA-DRB1 | ENSG00000196126.12 | transcript | ENST00000360004.6 | protein_coding | 2/6 | 219/1223 | 113/801 | 38/266 | chr6 | TogoVar | |||
HLA-G_chr6_29822825_29836021 | 29828657 | AC | A | frameshift_variant | HIGH | HG01884.hp2 HG02055.hp1 HG02280.hp1 others(9): Show |
a0005 | a0005c0008 | a0005c0008t0002 | a0005c0008t0002g0002 | 12 | 478 | 0.0251 | -1 | c.460 others(4): Show |
p.Leu others(5): Show |
HLA-G | ENSG00000204632.13 | transcript | ENST00000360323.11 | protein_coding | 3/7 | 480/1319 | 460/1017 | 154/338 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||
HRNR_chr1_152207076_152229193 | 152223252 | AT | A | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(378): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(158): Show | a0001c0001t0002a0001c0002t0002a0001c0002t0012others(160): Show | a0001c0001t0002g0001 a0001c0001t0002g0040 a0001c0001t0002g0189 others(169): Show |
381 | 415 | 0.9181 | -1 | c.1de others(2): Show |
p.Met others(3): Show |
HRNR | ENSG00000197915.7 | transcript | ENST00000368801.4 | protein_coding | 2/3 | 77/9629 | 1/8553 | 1/2850 | chr1 | TogoVar | |||
HSD17B13_chr4_87298794_87327882 | 87317092 | C | T | stop_gained others(1): Show |
HIGH | HG02055.hp2 HG02895.hp1 HG03225.hp1 |
a0004 | a0004c0005 | a0004c0005t0007 | a0004c0005t0007g0177 a0004c0005t0007g0178 a0004c0005t0007g0229 |
3 | 440 | 0.0068 | 0 | c.450 others(3): Show |
p.Trp others(4): Show |
HSD17B13 | ENSG00000170509.12 | transcript | ENST00000328546.5 | protein_coding | 3/7 | 491/2368 | 450/903 | 150/300 | chr4 | TogoVar | |||
HTT_chr4_3069681_3248957 | 3074876 | C | CAGCAGCA others(10): Show |
frameshift_variant | HIGH | HG02055.hp2 | a0040 | a0040c0043 | a0040c0043t0015 | a0040c0043t0015g0005 | 1 | 132 | 0.0076 | 17 | c.51_ others(22): Show |
p.Gln others(4): Show |
HTT | ENSG00000197386.14 | transcript | ENST00000355072.11 | protein_coding | 1/67 | 197/13472 | 52/9429 | 18/3142 | chr4 | TogoVar | |||
HTT_chr4_3069681_3248957 | 3074931 | CAGCAA | C | frameshift_variant | HIGH | HG01975.hp2 HG02055.hp1 HG02257.hp2 others(1): Show |
a0016 | a0016c0020a0016c0077 | a0016c0020t0003a0016c0077t0003 | a0016c0020t0003g0175 a0016c0020t0003g0176 a0016c0020t0003g0181 others(1): Show |
4 | 292 | 0.0137 | -5 | c.107 others(12): Show |
p.Gln others(4): Show |
HTT | ENSG00000197386.14 | transcript | ENST00000355072.11 | protein_coding | 1/67 | 252/13472 | 107/9429 | 36/3142 | chr4 | TogoVar | |||
HTT_chr4_3069681_3248957 | 3074938 | AG | A | frameshift_variant | HIGH | HG01070.hp1 HG01975.hp2 HG02055.hp1 others(2): Show |
a0016a0034 | a0016c0020a0016c0077a0034c0044 | a0016c0020t0003a0016c0077t0003a0034c0044t0002 | a0016c0020t0003g0175 a0016c0020t0003g0176 a0016c0020t0003g0181 others(2): Show |
5 | 172 | 0.0291 | -1 | c.114 others(4): Show |
p.Gln others(4): Show |
HTT | ENSG00000197386.14 | transcript | ENST00000355072.11 | protein_coding | 1/67 | 259/13472 | 114/9429 | 38/3142 | chr4 | TogoVar | |||
INSL4_chr9_5226419_5240304 | 5231525 | T | C | start_lost | HIGH | HG02055.hp2 HG02109.hp2 HG02145.hp1 others(2): Show |
a0003 | a0003c0006 | a0003c0006t0001 | a0003c0006t0001g0003 | 5 | 426 | 0.0117 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
INSL4 | ENSG00000120211.4 | transcript | ENST00000239316.4 | protein_coding | 1/2 | 107/1952 | 2/420 | 1/139 | chr9 | TogoVar | |||
IQSEC1_chr3_12892043_13078429 | 12901341 | T | TG | frameshift_variant | HIGH | HG01978.hp1 HG01978.hp2 HG02027.hp1 others(14): Show |
a0002a0010a0017 | a0002c0002a0002c0014a0002c0017others(2): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0005others(8): Show | a0002c0002t0001g0088 a0002c0002t0001g0089 a0002c0002t0001g0093 others(14): Show |
17 | 248 | 0.0685 | 1 | c.298 others(5): Show |
p.His others(5): Show |
IQSEC1 | ENSG00000144711.17 | transcript | ENST00000613206.2 | protein_coding | 14/14 | 3401/7700 | 2986/3345 | 996/1114 | chr3 | TogoVar | |||
ITPR2_chr12_26330352_26838194 | 26681871 | T | TACTC | splice_donor_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(101): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0003others(46): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(89): Show | a0001c0001t0001g0008 a0001c0001t0001g0047 a0001c0001t0001g0052 others(101): Show |
104 | 140 | 0.7429 | 4 | c.140 others(17): Show |
ITPR2 | ENSG00000123104.12 | transcript | ENST00000381340.8 | protein_coding | 13/56 | chr12 | TogoVar | |||||||
JSRP1_chr19_2247252_2261417 | 2255312 | C | G | start_lost | HIGH | HG00423.hp2 HG00438.hp1 HG00544.hp2 others(111): Show |
a0002 | a0002c0003a0002c0004a0002c0008others(4): Show | a0002c0003t0001a0002c0004t0001a0002c0008t0001others(4): Show | a0002c0003t0001g0006 a0002c0003t0001g0007 a0002c0003t0001g0011 others(23): Show |
114 | 434 | 0.2627 | 0 | c.3G> others(1): Show |
p.Met others(2): Show |
JSRP1 | ENSG00000167476.10 | transcript | ENST00000300961.10 | protein_coding | 2/7 | 68/1138 | 3/996 | 1/331 | chr19 | TogoVar | |||
KCNC3_chr19_50306937_50334377 | 50323201 | C | CG | frameshift_variant | HIGH | HG00438.hp1 HG00597.hp2 HG01109.hp1 others(11): Show |
a0001a0013 | a0001c0001a0001c0002a0013c0014 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0002g0010 others(10): Show |
14 | 378 | 0.0370 | 1 | c.175 others(5): Show |
p.Pro others(5): Show |
KCNC3 | ENSG00000131398.15 | transcript | ENST00000477616.2 | protein_coding | 2/5 | 2046/6747 | 1751/2274 | 584/757 | chr19 | TogoVar | |||
KCTD14_chr11_78010715_78028276 | 78023248 | A | T | start_lost | HIGH | HG01891.hp2 HG02055.hp1 HG02257.hp1 others(23): Show |
a0002 | a0002c0003a0002c0004 | a0002c0003t0001a0002c0003t0002a0002c0003t0004others(2): Show | a0002c0003t0001g0037 a0002c0003t0001g0039 a0002c0003t0001g0063 others(9): Show |
26 | 466 | 0.0558 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
KCTD14 | ENSG00000151364.17 | transcript | ENST00000353172.6 | protein_coding | 1/2 | 29/1673 | 2/768 | 1/255 | chr11 | TogoVar | |||
KCTD1_chr18_26449910_26553553 | 26547048 | T | TG | frameshift_variant | HIGH | HG00438.hp2 HG00621.hp2 HG00673.hp2 others(32): Show |
a0002 | a0002c0003a0002c0006a0002c0014others(1): Show | a0002c0003t0001a0002c0003t0002a0002c0003t0004others(3): Show | a0002c0003t0001g0300 a0002c0003t0001g0301 a0002c0003t0001g0302 others(32): Show |
35 | 336 | 0.1042 | 1 | c.148 others(5): Show |
p.Thr others(5): Show |
KCTD1 | ENSG00000134504.14 | transcript | ENST00000580059.7 | protein_coding | 1/5 | 1505/3448 | 1488/2598 | 496/865 | chr18 | TogoVar | |||
KDM4A_chr1_43645149_43710518 | 43660291 | CA | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(188): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(167): Show |
191 | 368 | 0.5190 | -1 | c.315 others(6): Show |
KDM4A | ENSG00000066135.13 | transcript | ENST00000372396.4 | protein_coding | 3/21 | INFO_REALIGN_3_PRIME | chr1 | TogoVar |