regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FAM120C_chrX_54063324_54188254 | 54132790 | CG | C | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | -1 | c.196 others(5): Show |
p.Arg others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 9/16 | 2019/8056 | 1963/3291 | 655/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54132795 | TA | T | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | -1 | c.195 others(5): Show |
p.Leu others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 9/16 | 2014/8056 | 1958/3291 | 653/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54132832 | T | TC | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | 1 | c.192 others(5): Show |
p.Asp others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 9/16 | 1977/8056 | 1921/3291 | 641/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54133865 | AG | A | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | -1 | c.179 others(5): Show |
p.Leu others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 8/16 | 1853/8056 | 1797/3291 | 599/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54133938 | A | AC | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | 1 | c.172 others(5): Show |
p.Asp others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 8/16 | 1780/8056 | 1724/3291 | 575/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54133978 | GC | G | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | -1 | c.168 others(5): Show |
p.Ala others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 8/16 | 1740/8056 | 1684/3291 | 562/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54134933 | TG | T | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | -1 | c.151 others(5): Show |
p.Gln others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 7/16 | 1569/8056 | 1513/3291 | 505/1096 | chrX | TogoVar | ||
FAM120C_chrX_54063324_54188254 | 54135011 | TG | T | frameshift_variant | HIGH | NA19075.hp1 | a0005 | a0005c0007 | a0005c0007t0034 | a0005c0007t0034g0007 | 1 | 190 | 0.0053 | -1 | c.143 others(5): Show |
p.His others(5): Show |
FAM120C | ENSG00000184083.12 | transcript | ENST00000375180.7 | protein_coding | 7/16 | 1491/8056 | 1435/3291 | 479/1096 | chrX | TogoVar | ||
FAM149B1_chr10_73163119_73249504 | 73168308 | T | TGAG | start_lost others(1): Show |
HIGH | HG00735.hp1 HG01243.hp1 HG01891.hp1 others(16): Show |
a0001a0002a0006 | a0001c0001a0002c0002a0006c0006 | a0001c0001t0003a0001c0001t0006a0001c0001t0015others(2): Show | a0001c0001t0003g0217a0001c0001t0003g0218a0001c0001t0003g0222others(16): Show | 19 | 236 | 0.0805 | 3 | c.-2_ others(7): Show |
FAM149B1 | ENSG00000138286.15 | transcript | ENST00000242505.11 | protein_coding | 1/14 | 223/5455 | 2/1749 | 1/582 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||
FAM9B_chrX_9019232_9039127 | 9025543 | G | GA | frameshift_variant | HIGH | NA19075.hp1 | a0003 | a0003c0003 | a0003c0003t0004 | a0003c0003t0004g0056 | 1 | 258 | 0.0039 | 1 | c.532 others(4): Show |
p.Ser others(5): Show |
FAM9B | ENSG00000177138.17 | transcript | ENST00000327220.10 | protein_coding | 8/9 | 897/2103 | 532/561 | 178/186 | chrX | TogoVar | ||
FAM9B_chrX_9019232_9039127 | 9032971 | T | TC | frameshift_variant | HIGH | NA19075.hp1 | a0003 | a0003c0003 | a0003c0003t0004 | a0003c0003t0004g0056 | 1 | 258 | 0.0039 | 1 | c.15d others(3): Show |
p.Lys others(3): Show |
FAM9B | ENSG00000177138.17 | transcript | ENST00000327220.10 | protein_coding | 2/9 | 380/2103 | 15/561 | 5/186 | chrX | TogoVar | ||
FGD1_chrX_54440454_54501234 | 54448851 | TG | T | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0007 | a0004c0007t0011 | a0004c0007t0011g0013 | 1 | 264 | 0.0038 | -1 | c.239 others(5): Show |
p.Pro others(5): Show |
FGD1 | ENSG00000102302.8 | transcript | ENST00000375135.4 | protein_coding | 16/18 | 3192/4343 | 2390/2886 | 797/961 | chrX | TogoVar | ||
FGD1_chrX_54440454_54501234 | 54448910 | A | AC | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0007 | a0004c0007t0011 | a0004c0007t0011g0013 | 1 | 264 | 0.0038 | 1 | c.233 others(10): Show |
p.Ser others(5): Show |
FGD1 | ENSG00000102302.8 | transcript | ENST00000375135.4 | protein_coding | 16/18 | 3133/4343 | 2331/2886 | 777/961 | chrX | TogoVar | ||
FGD1_chrX_54440454_54501234 | 54449175 | T | TG | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0007 | a0004c0007t0011 | a0004c0007t0011g0013 | 1 | 264 | 0.0038 | 1 | c.224 others(5): Show |
p.Lys others(5): Show |
FGD1 | ENSG00000102302.8 | transcript | ENST00000375135.4 | protein_coding | 15/18 | 3043/4343 | 2241/2886 | 747/961 | chrX | TogoVar | ||
FGD1_chrX_54440454_54501234 | 54449242 | A | AG | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0007 | a0004c0007t0011 | a0004c0007t0011g0013 | 1 | 264 | 0.0038 | 1 | c.217 others(5): Show |
p.Thr others(5): Show |
FGD1 | ENSG00000102302.8 | transcript | ENST00000375135.4 | protein_coding | 15/18 | 2976/4343 | 2174/2886 | 725/961 | chrX | TogoVar | ||
FGD1_chrX_54440454_54501234 | 54449720 | T | TC | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0007 | a0004c0007t0011 | a0004c0007t0011g0013 | 1 | 264 | 0.0038 | 1 | c.208 others(5): Show |
p.Glu others(5): Show |
FGD1 | ENSG00000102302.8 | transcript | ENST00000375135.4 | protein_coding | 14/18 | 2888/4343 | 2086/2886 | 696/961 | chrX | TogoVar | ||
FIG4_chr6_109686296_109830426 | 109732621 | G | GT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00323.hp2 HG00408.hp2 others(276): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0002c0002others(13): Show | a0001c0001t0002a0001c0001t0003a0001c0003t0001others(20): Show | a0001c0001t0002g0015a0001c0001t0002g0017a0001c0001t0002g0122others(274): Show | 279 | 370 | 0.7541 | 1 | c.447 others(6): Show |
FIG4 | ENSG00000112367.12 | transcript | ENST00000230124.8 | protein_coding | 4/22 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
FLG2_chr1_152343735_152365006 | 152350656 | G | T | stop_gained | HIGH | HG00323.hp2 HG00423.hp2 HG00597.hp2 others(152): Show |
a0002a0004a0006others(10): Show | a0002c0002a0002c0045a0004c0004others(13): Show | a0002c0002t0002a0002c0002t0011a0002c0002t0018others(16): Show | a0002c0002t0002g0002a0002c0002t0002g0074a0002c0002t0002g0076others(20): Show | 155 | 422 | 0.3673 | 0 | c.713 others(4): Show |
p.Ser others(5): Show |
FLG2 | ENSG00000143520.6 | transcript | ENST00000388718.5 | protein_coding | 3/3 | 7203/9124 | 7130/7176 | 2377/2391 | chr1 | TogoVar | ||
FMO2_chr1_171180300_171217686 | 171208951 | C | T | stop_gained | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(346): Show |
a0001a0002a0003others(9): Show | a0001c0001a0001c0015a0002c0002others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(30): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0006others(195): Show | 349 | 366 | 0.9536 | 0 | c.141 others(4): Show |
p.Gln others(4): Show |
FMO2 | ENSG00000094963.14 | transcript | ENST00000209929.10 | protein_coding | 9/9 | 1480/5215 | 1414/1608 | 472/535 | chr1 | TogoVar | ||
FMO2_chr1_171180300_171217686 | 171209118 | C | CT | frameshift_variant | HIGH | HG00140.hp2 HG00544.hp2 HG00741.hp2 others(78): Show |
a0002a0004 | a0002c0002a0002c0019a0004c0009 | a0002c0002t0004a0002c0002t0005a0002c0002t0025others(2): Show | a0002c0002t0004g0004a0002c0002t0004g0008a0002c0002t0004g0009others(40): Show | 81 | 366 | 0.2213 | 1 | c.158 others(5): Show |
p.Cys others(5): Show |
FMO2 | ENSG00000094963.14 | transcript | ENST00000209929.10 | protein_coding | 9/9 | 1655/5215 | 1589/1608 | 530/535 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
FMR1_chrX_147906919_147956125 | 147932729 | T | TG | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0008 | a0004c0008t0001 | a0004c0008t0001g0071 | 1 | 304 | 0.0033 | 1 | c.847 others(4): Show |
p.Glu others(5): Show |
FMR1 | ENSG00000102081.16 | transcript | ENST00000370475.9 | protein_coding | 9/17 | 1109/4441 | 848/1899 | 283/632 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FMR1_chrX_147906919_147956125 | 147940622 | A | AT | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0008 | a0004c0008t0001 | a0004c0008t0001g0071 | 1 | 304 | 0.0033 | 1 | c.123 others(5): Show |
p.Ala others(5): Show |
FMR1 | ENSG00000102081.16 | transcript | ENST00000370475.9 | protein_coding | 13/17 | 1498/4441 | 1237/1899 | 413/632 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FMR1_chrX_147906919_147956125 | 147940658 | TA | T | frameshift_variant others(1): Show |
HIGH | NA19075.hp1 | a0004 | a0004c0008 | a0004c0008t0001 | a0004c0008t0001g0071 | 1 | 304 | 0.0033 | -1 | c.127 others(5): Show |
p.Lys others(5): Show |
FMR1 | ENSG00000102081.16 | transcript | ENST00000370475.9 | protein_coding | 13/17 | 1535/4441 | 1274/1899 | 425/632 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FOLR3_chr11_72130725_72144892 | 72139110 | CTA | C | frameshift_variant | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(333): Show |
a0001a0003a0005 | a0001c0001a0001c0003a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0010others(24): Show | 336 | 384 | 0.8750 | -2 | c.320 others(9): Show |
p.Tyr others(5): Show |
FOLR3 | ENSG00000110203.10 | transcript | ENST00000611028.3 | protein_coding | 3/5 | 370/849 | 320/738 | 107/245 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
FSCB_chr14_44499149_44512283 | 44504951 | A | AGGGGCCT others(30): Show |
frameshift_variant others(1): Show |
HIGH | NA19075.hp2 | a0016 | a0016c0023 | a0016c0023t0002 | a0016c0023t0002g0000 | 1 | 446 | 0.0022 | 37 | c.203 others(46): Show |
p.Ala others(5): Show |
FSCB | ENSG00000189139.6 | transcript | ENST00000340446.5 | protein_coding | 1/1 | 2332/3135 | 2036/2478 | 679/825 | chr14 | TogoVar | ||
FTSJ1_chrX_48471199_48491350 | 48479070 | T | TA | frameshift_variant | HIGH | NA19075.hp1 | a0007 | a0007c0005 | a0007c0005t0015 | a0007c0005t0015g0071 | 1 | 308 | 0.0033 | 1 | c.317 others(4): Show |
p.Cys others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 5/13 | 603/1899 | 318/990 | 106/329 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
FTSJ1_chrX_48471199_48491350 | 48482461 | T | TG | frameshift_variant | HIGH | NA19075.hp1 | a0007 | a0007c0005 | a0007c0005t0015 | a0007c0005t0015g0071 | 1 | 308 | 0.0033 | 1 | c.718 others(4): Show |
p.Asp others(5): Show |
FTSJ1 | ENSG00000068438.15 | transcript | ENST00000348411.3 | protein_coding | 10/13 | 1004/1899 | 719/990 | 240/329 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GABRE_chrX_151948124_151979676 | 151955525 | GA | G | frameshift_variant | HIGH | NA19075.hp1 | a0015 | a0015c0020 | a0015c0020t0001 | a0015c0020t0001g0257 | 1 | 326 | 0.0031 | -1 | c.979 others(4): Show |
p.Ser others(5): Show |
GABRE | ENSG00000102287.19 | transcript | ENST00000370328.4 | protein_coding | 8/9 | 1030/3149 | 979/1521 | 327/506 | chrX | TogoVar | ||
GCNA_chrX_71573437_71618583 | 71603835 | GGATGTTC others(10): Show |
G | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | -17 | c.559 others(24): Show |
p.Asp others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 8/13 | 647/2765 | 559/2076 | 187/691 | chrX | TogoVar | ||
GCNA_chrX_71573437_71618583 | 71603874 | C | CA | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | 1 | c.599 others(4): Show |
p.Asn others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 8/13 | 688/2765 | 600/2076 | 200/691 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GCNA_chrX_71573437_71618583 | 71604088 | GA | G | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | -1 | c.812 others(4): Show |
p.Asp others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 8/13 | 900/2765 | 812/2076 | 271/691 | chrX | TogoVar | ||
GCNA_chrX_71573437_71618583 | 71604160 | T | TTC | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | 2 | c.883 others(9): Show |
p.Ser others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 8/13 | 972/2765 | 884/2076 | 295/691 | chrX | TogoVar | ||
GCNA_chrX_71573437_71618583 | 71604198 | C | CA | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | 1 | c.923 others(4): Show |
p.Ser others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 8/13 | 1012/2765 | 924/2076 | 308/691 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GCNA_chrX_71573437_71618583 | 71604654 | C | CA | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | 1 | c.138 others(5): Show |
p.Asn others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 8/13 | 1471/2765 | 1383/2076 | 461/691 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GCNA_chrX_71573437_71618583 | 71605705 | C | CA | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | 1 | c.144 others(5): Show |
p.Val others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 9/13 | 1535/2765 | 1447/2076 | 483/691 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GCNA_chrX_71573437_71618583 | 71605713 | G | GA | frameshift_variant | HIGH | NA19075.hp1 | a0010 | a0010c0010 | a0010c0010t0001 | a0010c0010t0001g0060 | 1 | 265 | 0.0038 | 1 | c.145 others(5): Show |
p.Arg others(5): Show |
GCNA | ENSG00000147174.12 | transcript | ENST00000373696.8 | protein_coding | 9/13 | 1544/2765 | 1456/2076 | 486/691 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GEMIN8_chrX_14001726_14034892 | 14008956 | C | CG | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0004 | a0004c0004t0006 | a0004c0004t0006g0099 | 1 | 273 | 0.0037 | 1 | c.685 others(4): Show |
p.Arg others(5): Show |
GEMIN8 | ENSG00000046647.14 | transcript | ENST00000680255.1 | protein_coding | 5/5 | 916/3147 | 685/729 | 229/242 | chrX | TogoVar | ||
GEMIN8_chrX_14001726_14034892 | 14008995 | T | TC | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0004 | a0004c0004t0006 | a0004c0004t0006g0099 | 1 | 273 | 0.0037 | 1 | c.646 others(4): Show |
p.Glu others(5): Show |
GEMIN8 | ENSG00000046647.14 | transcript | ENST00000680255.1 | protein_coding | 5/5 | 877/3147 | 646/729 | 216/242 | chrX | TogoVar | ||
GEMIN8_chrX_14001726_14034892 | 14009011 | T | TG | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0004 | a0004c0004t0006 | a0004c0004t0006g0099 | 1 | 273 | 0.0037 | 1 | c.630 others(4): Show |
p.Lys others(5): Show |
GEMIN8 | ENSG00000046647.14 | transcript | ENST00000680255.1 | protein_coding | 5/5 | 861/3147 | 630/729 | 210/242 | chrX | TogoVar | ||
GEMIN8_chrX_14001726_14034892 | 14009022 | T | TC | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0004 | a0004c0004t0006 | a0004c0004t0006g0099 | 1 | 273 | 0.0037 | 1 | c.619 others(4): Show |
p.Asp others(5): Show |
GEMIN8 | ENSG00000046647.14 | transcript | ENST00000680255.1 | protein_coding | 5/5 | 850/3147 | 619/729 | 207/242 | chrX | TogoVar | ||
GEMIN8_chrX_14001726_14034892 | 14009094 | C | CG | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0004 | a0004c0004t0006 | a0004c0004t0006g0099 | 1 | 273 | 0.0037 | 1 | c.547 others(4): Show |
p.Arg others(5): Show |
GEMIN8 | ENSG00000046647.14 | transcript | ENST00000680255.1 | protein_coding | 5/5 | 778/3147 | 547/729 | 183/242 | chrX | TogoVar | ||
GEMIN8_chrX_14001726_14034892 | 14009099 | G | GT | frameshift_variant | HIGH | NA19075.hp1 | a0004 | a0004c0004 | a0004c0004t0006 | a0004c0004t0006g0099 | 1 | 273 | 0.0037 | 1 | c.542 others(4): Show |
p.Asn others(5): Show |
GEMIN8 | ENSG00000046647.14 | transcript | ENST00000680255.1 | protein_coding | 5/5 | 773/3147 | 542/729 | 181/242 | chrX | TogoVar | ||
GMPR_chr6_16233587_16300549 | 16295116 | A | AACTC | frameshift_variant | HIGH | NA18945.hp2 NA18971.hp1 NA19075.hp1 others(2): Show |
a0000 | a0000c0005a0000c0011 | a0000c0005t0002a0000c0011t0002 | a0000c0005t0002g0153a0000c0005t0002g0158a0000c0005t0002g0182others(2): Show | 5 | 344 | 0.0145 | 4 | c.970 others(11): Show |
p.Lys others(5): Show |
GMPR | ENSG00000137198.10 | transcript | ENST00000259727.5 | protein_coding | 9/9 | 1081/1508 | 974/1038 | 325/345 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
GOLGA6L6_chr15_20526856_20546800 | 20535014 | C | A | stop_gained | HIGH | HG00408.hp1 HG00609.hp1 HG00735.hp1 others(91): Show |
a0001a0006a0010others(13): Show | a0001c0001a0001c0005a0001c0019others(23): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0014others(30): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0014others(49): Show | 94 | 214 | 0.4393 | 0 | c.142 others(4): Show |
p.Glu others(4): Show |
GOLGA6L6 | ENSG00000277322.1 | transcript | ENST00000619213.1 | protein_coding | 8/9 | 1511/4013 | 1420/2175 | 474/724 | chr15 | TogoVar | ||
GOLGA8S_chr15_23349748_23373341 | 23364403 | G | T | stop_gained | HIGH | HG00280.hp1 HG00438.hp1 HG00544.hp1 others(75): Show |
a0002a0013a0016others(17): Show | a0002c0002a0002c0086a0002c0087others(23): Show | a0002c0002t0001a0002c0002t0020a0002c0086t0001others(24): Show | a0002c0002t0001g0004a0002c0002t0001g0011a0002c0002t0001g0018others(61): Show | 78 | 430 | 0.1814 | 0 | c.144 others(4): Show |
p.Glu others(4): Show |
GOLGA8S | ENSG00000261739.3 | transcript | ENST00000562295.3 | protein_coding | 16/19 | 1509/5186 | 1447/1917 | 483/638 | chr15 | TogoVar | ||
GP6_chr19_55008705_55043264 | 55014735 | G | GCAGA | frameshift_variant | HIGH | HG00423.hp2 HG00438.hp2 HG00621.hp1 others(55): Show |
a0003a0019 | a0003c0003a0003c0016a0003c0019others(1): Show | a0003c0003t0003a0003c0016t0003a0003c0019t0003others(1): Show | a0003c0003t0003g0003a0003c0003t0003g0004a0003c0003t0003g0019others(53): Show | 58 | 441 | 0.1315 | 4 | c.120 others(13): Show |
p.Pro others(5): Show |
GP6 | ENSG00000088053.11 | transcript | ENST00000310373.7 | protein_coding | 8/8 | 1237/2268 | 1209/1863 | 403/620 | chr19 | TogoVar | ||
GPR33_chr14_31477875_31493039 | 31483548 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(423): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0007others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(82): Show | 426 | 448 | 0.9509 | 0 | c.418 others(3): Show |
p.Arg others(4): Show |
GPR33 | ENSG00000214943.5 | transcript | ENST00000399285.5 | protein_coding | 2/2 | 567/1240 | 418/1002 | 140/333 | chr14 | TogoVar | ||
HLA-B_chr6_31348875_31362179 | 31356366 | G | T | stop_gained | HIGH | HG00438.hp2 HG00621.hp2 HG01074.hp1 others(44): Show |
a0014a0018a0024others(7): Show | a0014c0014a0018c0016a0024c0023others(7): Show | a0014c0014t0010a0014c0014t0036a0018c0016t0006others(9): Show | a0014c0014t0010g0020a0014c0014t0010g0063a0014c0014t0036g0110others(13): Show | 47 | 468 | 0.1004 | 0 | c.420 others(3): Show |
p.Tyr others(4): Show |
HLA-B | ENSG00000234745.14 | transcript | ENST00000412585.7 | protein_coding | 3/8 | 441/1536 | 420/1089 | 140/362 | chr6 | TogoVar | ||
HMGB3_chrX_150978335_150995771 | 150986145 | AG | A | frameshift_variant | HIGH | NA19075.hp1 | a0003 | a0003c0003 | a0003c0003t0031 | a0003c0003t0031g0078 | 1 | 330 | 0.0030 | -1 | c.248 others(4): Show |
p.Gly others(4): Show |
HMGB3 | ENSG00000029993.15 | transcript | ENST00000325307.12 | protein_coding | 3/5 | 295/3507 | 248/603 | 83/200 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
HNRNPCL2_chr1_13110488_13121854 | 13115841 | A | T | stop_gained | HIGH | NA19075.hp2 | a0012 | a0012c0017 | a0012c0017t0001 | a0012c0017t0001g0036 | 1 | 425 | 0.0024 | 0 | c.560 others(3): Show |
p.Leu others(4): Show |
HNRNPCL2 | ENSG00000275774.3 | transcript | ENST00000621994.3 | protein_coding | 2/2 | 803/1156 | 560/882 | 187/293 | chr1 | TogoVar |