regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
OSTM1_chr6_108036409_108079741 | 108074299 | A | AG | frameshift_variant | HIGH | HG01175.hp1 HG01175.hp2 HG01517.hp2 others(7): Show |
a0003 | a0003c0004 | a0003c0004t0001a0003c0004t0004a0003c0004t0005others(2): Show | a0003c0004t0001g0049a0003c0004t0001g0050a0003c0004t0001g0051others(7): Show | 10 | 388 | 0.0258 | 1 | c.352 others(4): Show |
p.Leu others(5): Show |
OSTM1 | ENSG00000081087.16 | transcript | ENST00000193322.8 | protein_coding | 1/6 | 442/4471 | 352/1005 | 118/334 | chr6 | TogoVar | ||
OXCT2_chr1_39764523_39776348 | 39770494 | GA | G | frameshift_variant | HIGH | HG00597.hp2 HG00609.hp2 HG00621.hp2 others(37): Show |
a0003a0006a0007others(2): Show | a0003c0004a0003c0008a0003c0012others(5): Show | a0003c0004t0004a0003c0008t0001a0003c0012t0004others(5): Show | a0003c0004t0004g0000a0003c0008t0001g0000a0003c0012t0004g0000others(5): Show | 40 | 454 | 0.0881 | -1 | c.761 others(4): Show |
p.Phe others(5): Show |
OXCT2 | ENSG00000198754.5 | transcript | ENST00000327582.5 | protein_coding | 1/1 | 854/1826 | 761/1554 | 254/517 | chr1 | TogoVar | ||
P2RX5_chr17_3668227_3701155 | 3690982 | TG | T | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(216): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0006others(206): Show | 219 | 362 | 0.6050 | -1 | c.333 others(4): Show |
p.Asn others(5): Show |
P2RX5 | ENSG00000083454.23 | transcript | ENST00000225328.10 | protein_coding | 3/12 | 483/2060 | 333/1269 | 111/422 | chr17 | TogoVar | ||
PADI6_chr1_17367196_17406699 | 17398662 | C | CCCCACCC others(1): Show |
splice_acceptor_variant others(1): Show |
HIGH | HG00323.hp1 HG00408.hp2 HG00438.hp2 others(49): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0002a0001c0001t0004a0001c0002t0003others(9): Show | a0001c0001t0002g0072a0001c0001t0002g0254a0001c0001t0004g0079others(37): Show | 52 | 412 | 0.1262 | 8 | c.169 others(22): Show |
PADI6 | ENSG00000276747.1 | transcript | ENST00000619609.1 | protein_coding | 14/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PAGE2B_chrX_55070030_55083909 | 55076045 | A | AT | frameshift_variant | HIGH | NA18978.hp1 | a0005 | a0005c0009 | a0005c0009t0004 | a0005c0009t0004g0026 | 1 | 325 | 0.0031 | 1 | c.4_5 others(4): Show |
p.Ser others(3): Show |
PAGE2B | ENSG00000238269.9 | transcript | ENST00000374971.2 | protein_coding | 2/5 | 98/540 | 5/336 | 2/111 | chrX | TogoVar | ||
PATE4_chr11_125828316_125845072 | 125837866 | A | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(193): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0001c0001t0012a0001c0001t0016others(2): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(21): Show | 196 | 424 | 0.4623 | 0 | c.59- others(4): Show |
PATE4 | ENSG00000237353.7 | transcript | ENST00000457514.3 | protein_coding | 1/2 | chr11 | TogoVar | ||||||
PBDC1_chrX_76168062_76183314 | 76173639 | T | TA | frameshift_variant others(1): Show |
HIGH | NA18978.hp2 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0028 | 1 | 293 | 0.0034 | 1 | c.86d others(3): Show |
p.Tyr others(4): Show |
PBDC1 | ENSG00000102390.11 | transcript | ENST00000373358.8 | protein_coding | 2/6 | 164/1185 | 87/702 | 29/233 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PBOV1_chr6_138210986_138223491 | 138218046 | A | AG | frameshift_variant | HIGH | HG00140.hp2 HG00408.hp1 HG00558.hp2 others(87): Show |
a0000 | a0000c0002a0000c0004 | a0000c0002t0002a0000c0002t0005a0000c0002t0009others(3): Show | a0000c0002t0002g0000a0000c0002t0005g0000a0000c0002t0009g0000others(3): Show | 90 | 384 | 0.2344 | 1 | c.349 others(4): Show |
p.Leu others(5): Show |
PBOV1 | ENSG00000254440.3 | transcript | ENST00000527246.3 | protein_coding | 1/1 | 445/2506 | 349/408 | 117/135 | chr6 | TogoVar | ||
PCSK1N_chrX_48826096_48840610 | 48831975 | C | CG | frameshift_variant | HIGH | NA18978.hp1 | a0009 | a0009c0007 | a0009c0007t0002 | a0009c0007t0002g0039 | 1 | 314 | 0.0032 | 1 | c.480 others(4): Show |
p.Ala others(5): Show |
PCSK1N | ENSG00000102109.9 | transcript | ENST00000218230.6 | protein_coding | 2/3 | 558/1025 | 480/783 | 160/260 | chrX | TogoVar | ||
PCSK1N_chrX_48826096_48840610 | 48832068 | C | CG | frameshift_variant | HIGH | NA18978.hp1 | a0009 | a0009c0007 | a0009c0007t0002 | a0009c0007t0002g0039 | 1 | 314 | 0.0032 | 1 | c.387 others(4): Show |
p.Asp others(5): Show |
PCSK1N | ENSG00000102109.9 | transcript | ENST00000218230.6 | protein_coding | 2/3 | 465/1025 | 387/783 | 129/260 | chrX | TogoVar | ||
PGPEP1L_chr15_98963229_99012792 | 98968575 | A | AC | frameshift_variant | HIGH | HG00280.hp2 HG00423.hp1 HG00438.hp2 others(166): Show |
a0000 | a0000c0002a0000c0005a0000c0010 | a0000c0002t0001a0000c0002t0002a0000c0002t0003others(16): Show | a0000c0002t0001g0001a0000c0002t0001g0003a0000c0002t0001g0004others(162): Show | 169 | 398 | 0.4246 | 1 | c.331 others(4): Show |
p.Val others(5): Show |
PGPEP1L | ENSG00000183571.11 | transcript | ENST00000535714.2 | protein_coding | 5/5 | 1134/1481 | 331/429 | 111/142 | chr15 | TogoVar | ||
PIR_chrX_15379799_15498333 | 15491239 | C | CT | frameshift_variant | HIGH | NA18978.hp2 | a0004 | a0004c0005 | a0004c0005t0007 | a0004c0005t0007g0270 | 1 | 272 | 0.0037 | 1 | c.18d others(3): Show |
p.Val others(3): Show |
PIR | ENSG00000087842.11 | transcript | ENST00000380420.10 | protein_coding | 2/10 | 214/1274 | 18/873 | 6/290 | chrX | TogoVar | ||
PLEC_chr8_143910153_143944597 | 143925061 | G | GC | frameshift_variant | HIGH | HG00609.hp1 HG00673.hp1 HG01192.hp1 others(25): Show |
a0005a0011a0024others(6): Show | a0005c0011a0005c0038a0005c0171others(18): Show | a0005c0011t0001a0005c0038t0001a0005c0171t0008others(18): Show | a0005c0011t0001g0019a0005c0011t0001g0045a0005c0011t0001g0163others(23): Show | 28 | 358 | 0.0782 | 1 | c.486 others(5): Show |
p.Ala others(6): Show |
PLEC | ENSG00000178209.17 | transcript | ENST00000345136.8 | protein_coding | 31/32 | 5003/14804 | 4867/13644 | 1623/4547 | chr8 | TogoVar | ||
PLK4_chr4_127875893_127904224 | 127891075 | G | GT | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00438.hp2 HG00544.hp1 others(76): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0003a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0007a0001c0003t0001others(4): Show | a0001c0001t0001g0086a0001c0001t0001g0096a0001c0001t0001g0111others(43): Show | 79 | 364 | 0.2170 | 1 | c.183 others(7): Show |
PLK4 | ENSG00000142731.11 | transcript | ENST00000270861.10 | protein_coding | 7/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
PNMA6F_chrX_153312680_153326767 | 153319094 | A | AC | frameshift_variant | HIGH | NA18978.hp2 | a0005 | a0005c0021 | a0005c0021t0028 | a0005c0021t0028g0025 | 1 | 331 | 0.0030 | 1 | c.158 others(5): Show |
p.Pro others(5): Show |
PNMA6F | ENSG00000225110.3 | transcript | ENST00000436629.3 | protein_coding | 2/2 | 1879/3294 | 1580/1737 | 527/578 | chrX | TogoVar | ||
PNMA6F_chrX_153312680_153326767 | 153319948 | G | GC | frameshift_variant | HIGH | NA18978.hp2 | a0005 | a0005c0021 | a0005c0021t0028 | a0005c0021t0028g0025 | 1 | 331 | 0.0030 | 1 | c.726 others(4): Show |
p.Pro others(5): Show |
PNMA6F | ENSG00000225110.3 | transcript | ENST00000436629.3 | protein_coding | 2/2 | 1025/3294 | 726/1737 | 242/578 | chrX | TogoVar | ||
PNMA6F_chrX_153312680_153326767 | 153320476 | C | CA | frameshift_variant | HIGH | NA18978.hp2 | a0005 | a0005c0021 | a0005c0021t0028 | a0005c0021t0028g0025 | 1 | 331 | 0.0030 | 1 | c.198 others(4): Show |
p.Glu others(4): Show |
PNMA6F | ENSG00000225110.3 | transcript | ENST00000436629.3 | protein_coding | 2/2 | 497/3294 | 198/1737 | 66/578 | chrX | TogoVar | ||
PNMA6F_chrX_153312680_153326767 | 153320644 | C | CA | frameshift_variant | HIGH | NA18978.hp2 | a0005 | a0005c0021 | a0005c0021t0028 | a0005c0021t0028g0025 | 1 | 331 | 0.0030 | 1 | c.30d others(3): Show |
p.Val others(4): Show |
PNMA6F | ENSG00000225110.3 | transcript | ENST00000436629.3 | protein_coding | 2/2 | 329/3294 | 30/1737 | 10/578 | chrX | TogoVar | ||
POU3F2_chr6_98829574_98844458 | 98835104 | C | CG | frameshift_variant | HIGH | HG00408.hp1 HG00597.hp1 HG00597.hp2 others(44): Show |
a0002 | a0002c0002a0002c0004 | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(7): Show | a0002c0002t0001g0000a0002c0002t0002g0000a0002c0002t0004g0000others(7): Show | 47 | 436 | 0.1078 | 1 | c.239 others(4): Show |
p.Gly others(4): Show |
POU3F2 | ENSG00000184486.10 | transcript | ENST00000328345.8 | protein_coding | 1/1 | 540/4885 | 240/1332 | 80/443 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
PPP1R2C_chrX_42772366_42783163 | 42777517 | TC | T | frameshift_variant | HIGH | NA18978.hp1 | a0005 | a0005c0005 | a0005c0005t0002 | a0005c0005t0002g0000 | 1 | 333 | 0.0030 | -1 | c.562 others(4): Show |
p.Glu others(5): Show |
PPP1R2C | ENSG00000102055.7 | transcript | ENST00000378131.4 | protein_coding | 1/1 | 646/798 | 562/609 | 188/202 | chrX | TogoVar | ||
PPP1R2C_chrX_42772366_42783163 | 42777549 | GT | G | frameshift_variant | HIGH | NA18978.hp1 | a0005 | a0005c0005 | a0005c0005t0002 | a0005c0005t0002g0000 | 1 | 333 | 0.0030 | -1 | c.530 others(4): Show |
p.Asn others(5): Show |
PPP1R2C | ENSG00000102055.7 | transcript | ENST00000378131.4 | protein_coding | 1/1 | 614/798 | 530/609 | 177/202 | chrX | TogoVar | ||
PPP1R2C_chrX_42772366_42783163 | 42777565 | GT | G | frameshift_variant | HIGH | NA18978.hp1 | a0005 | a0005c0005 | a0005c0005t0002 | a0005c0005t0002g0000 | 1 | 333 | 0.0030 | -1 | c.514 others(4): Show |
p.Thr others(5): Show |
PPP1R2C | ENSG00000102055.7 | transcript | ENST00000378131.4 | protein_coding | 1/1 | 598/798 | 514/609 | 172/202 | chrX | TogoVar | ||
PPP1R2C_chrX_42772366_42783163 | 42777937 | TC | T | frameshift_variant | HIGH | NA18978.hp1 | a0005 | a0005c0005 | a0005c0005t0002 | a0005c0005t0002g0000 | 1 | 333 | 0.0030 | -1 | c.142 others(4): Show |
p.Asp others(4): Show |
PPP1R2C | ENSG00000102055.7 | transcript | ENST00000378131.4 | protein_coding | 1/1 | 226/798 | 142/609 | 48/202 | chrX | TogoVar | ||
PRAMEF2_chr1_12852086_12866909 | 12860036 | G | T | stop_gained | HIGH | HG00642.hp2 HG01515.hp2 HG02071.hp1 others(25): Show |
a0002a0014 | a0002c0002a0002c0022a0002c0023others(1): Show | a0002c0002t0003a0002c0022t0003a0002c0023t0008others(1): Show | a0002c0002t0003g0005a0002c0002t0003g0022a0002c0002t0003g0023others(3): Show | 28 | 338 | 0.0828 | 0 | c.631 others(3): Show |
p.Glu others(4): Show |
PRAMEF2 | ENSG00000120952.4 | transcript | ENST00000240189.2 | protein_coding | 3/4 | 718/1642 | 631/1425 | 211/474 | chr1 | TogoVar | ||
PRAMEF33_chr1_13298539_13313907 | 13307108 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(242): Show |
a0001a0003a0022others(2): Show | a0001c0001a0001c0003a0001c0005others(31): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0002others(36): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0034others(62): Show | 245 | 417 | 0.5875 | 0 | c.758 others(3): Show |
p.Trp others(4): Show |
PRAMEF33 | ENSG00000237700.2 | transcript | ENST00000437300.2 | protein_coding | 3/4 | 831/1518 | 758/1425 | 253/474 | chr1 | TogoVar | ||
PRPF3_chr1_150316533_150358233 | 150324880 | C | CTTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(303): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(297): Show | 306 | 362 | 0.8453 | 4 | c.-48 others(15): Show |
PRPF3 | ENSG00000117360.13 | transcript | ENST00000324862.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PRRG3_chrX_151690458_151710924 | 151700743 | C | CG | frameshift_variant | HIGH | NA18978.hp1 | a0008 | a0008c0008 | a0008c0008t0042 | a0008c0008t0042g0045 | 1 | 336 | 0.0030 | 1 | c.410 others(4): Show |
p.Thr others(5): Show |
PRRG3 | ENSG00000130032.17 | transcript | ENST00000674457.1 | protein_coding | 4/4 | 529/5705 | 411/696 | 137/231 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PTEN_chr10_87858625_87976930 | 87960876 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(84): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(27): Show | a0001c0001t0002g0009a0001c0001t0002g0144a0001c0001t0002g0211others(84): Show | 87 | 322 | 0.2702 | 1 | c.802 others(6): Show |
PTEN | ENSG00000171862.15 | transcript | ENST00000371953.8 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
PTTG1IP2_chr7_90464639_90518397 | 90487326 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00423.hp2 HG00438.hp2 others(69): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0235others(58): Show | 72 | 384 | 0.1875 | 0 | c.193 others(5): Show |
PTTG1IP2 | ENSG00000251154.2 | transcript | ENST00000509356.2 | protein_coding | 2/6 | chr7 | TogoVar | ||||||
RAB24_chr5_177296198_177308719 | 177301989 | T | A | splice_acceptor_variant others(1): Show |
HIGH | NA18978.hp2 | a0004 | a0004c0006 | a0004c0006t0002 | a0004c0006t0002g0029 | 1 | 404 | 0.0025 | 0 | c.485 others(5): Show |
RAB24 | ENSG00000169228.14 | transcript | ENST00000303251.11 | protein_coding | 6/7 | chr5 | TogoVar | ||||||
RAB24_chr5_177296198_177308719 | 177302126 | A | T | splice_donor_variant others(1): Show |
HIGH | NA18978.hp2 | a0004 | a0004c0006 | a0004c0006t0002 | a0004c0006t0002g0029 | 1 | 404 | 0.0025 | 0 | c.484 others(5): Show |
RAB24 | ENSG00000169228.14 | transcript | ENST00000303251.11 | protein_coding | 6/7 | chr5 | TogoVar | ||||||
RAB33A_chrX_130166962_130189870 | 130172098 | G | GC | frameshift_variant | HIGH | NA18978.hp1 | a0004 | a0004c0004 | a0004c0004t0001 | a0004c0004t0001g0183 | 1 | 316 | 0.0032 | 1 | c.39d others(3): Show |
p.Ala others(4): Show |
RAB33A | ENSG00000134594.5 | transcript | ENST00000257017.5 | protein_coding | 1/2 | 141/945 | 40/714 | 14/237 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RAPGEFL1_chr17_40172470_40200650 | 40178094 | A | AGCCGCCC others(18): Show |
frameshift_variant | HIGH | NA18978.hp1 | a0006 | a0006c0012 | a0006c0012t0004 | a0006c0012t0004g0171 | 1 | 316 | 0.0032 | 25 | c.240 others(32): Show |
p.Pro others(4): Show |
RAPGEFL1 | ENSG00000108352.13 | transcript | ENST00000620260.6 | protein_coding | 1/15 | 633/4243 | 241/1989 | 81/662 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
RBMXL2_chr11_7083998_7096148 | 7089456 | C | CG | frameshift_variant | HIGH | HG00621.hp1 HG00642.hp2 HG01099.hp2 others(39): Show |
a0003a0005a0010others(1): Show | a0003c0004a0003c0005a0003c0011others(4): Show | a0003c0004t0001a0003c0004t0002a0003c0004t0003others(9): Show | a0003c0004t0001g0000a0003c0004t0002g0000a0003c0004t0003g0000others(9): Show | 42 | 460 | 0.0913 | 1 | c.341 others(4): Show |
p.Gly others(5): Show |
RBMXL2 | ENSG00000170748.7 | transcript | ENST00000306904.7 | protein_coding | 1/1 | 465/2151 | 342/1179 | 114/392 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
RHOXF2B_chrX_120067264_120082690 | 120077059 | G | GT | frameshift_variant | HIGH | NA18978.hp2 | a0007 | a0007c0020 | a0007c0020t0001 | a0007c0020t0001g0071 | 1 | 213 | 0.0047 | 1 | c.308 others(4): Show |
p.Asn others(5): Show |
RHOXF2B | ENSG00000203989.5 | transcript | ENST00000371402.5 | protein_coding | 2/4 | 446/1257 | 308/867 | 103/288 | chrX | TogoVar | ||
RHOXF2B_chrX_120067264_120082690 | 120077544 | AG | A | frameshift_variant | HIGH | NA18978.hp2 | a0007 | a0007c0020 | a0007c0020t0001 | a0007c0020t0001g0071 | 1 | 213 | 0.0047 | -1 | c.8de others(2): Show |
p.Pro others(3): Show |
RHOXF2B | ENSG00000203989.5 | transcript | ENST00000371402.5 | protein_coding | 1/4 | 146/1257 | 8/867 | 3/288 | chrX | TogoVar | ||
RPL26L1_chr5_172954424_172974771 | 172968546 | C | T | stop_gained | HIGH | NA18978.hp1 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0125 | 1 | 386 | 0.0026 | 0 | c.256 others(3): Show |
p.Gln others(3): Show |
RPL26L1 | ENSG00000037241.7 | transcript | ENST00000265100.6 | protein_coding | 3/4 | 310/722 | 256/438 | 86/145 | chr5 | TogoVar | ||
RPL26L1_chr5_172954424_172974771 | 172968600 | G | A | splice_donor_variant others(1): Show |
HIGH | NA18978.hp1 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0125 | 1 | 386 | 0.0026 | 0 | c.309 others(5): Show |
RPL26L1 | ENSG00000037241.7 | transcript | ENST00000265100.6 | protein_coding | 3/3 | chr5 | TogoVar | ||||||
RSPH6A_chr19_45790713_45820308 | 45795880 | T | TCTCCTCG others(12): Show |
frameshift_variant | HIGH | NA18978.hp2 | a0009 | a0009c0016 | a0009c0016t0001 | a0009c0016t0001g0217 | 1 | 424 | 0.0024 | 19 | c.214 others(28): Show |
p.Thr others(5): Show |
RSPH6A | ENSG00000104941.8 | transcript | ENST00000221538.8 | protein_coding | 6/6 | 2274/2442 | 2142/2154 | 714/717 | chr19 | TogoVar | ||
RTL10_chr22_19841146_19859874 | 19851994 | G | A | stop_gained | HIGH | HG00621.hp2 NA18978.hp1 NA18982.hp1 |
a0005 | a0005c0008 | a0005c0008t0002a0005c0008t0028 | a0005c0008t0002g0032a0005c0008t0028g0074 | 3 | 418 | 0.0072 | 0 | c.268 others(3): Show |
p.Arg others(3): Show |
RTL10 | ENSG00000215012.9 | transcript | ENST00000328554.9 | protein_coding | 3/3 | 805/6653 | 268/1095 | 90/364 | chr22 | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TA | splice_acceptor_variant others(1): Show |
HIGH | HG00438.hp1 HG00609.hp1 HG00673.hp2 others(50): Show |
a0001a0002a0008 | a0001c0013a0002c0003a0008c0007 | a0001c0013t0002a0002c0003t0003a0008c0007t0003 | a0001c0013t0002g0012a0002c0003t0003g0021a0002c0003t0003g0022others(50): Show | 53 | 386 | 0.1373 | 1 | c.100 others(7): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00544.hp1 HG00558.hp2 others(101): Show |
a0001a0006a0007 | a0001c0001a0001c0004a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0010others(101): Show | 104 | 386 | 0.2694 | 3 | c.100 others(16): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SCARB2_chr4_76153737_76218824 | 76172721 | TTGCCCAG others(4076): Show |
T | exon_loss_variant | HIGH | NA18978.hp1 | a0008 | a0008c0011 | a0008c0011t0002 | a0008c0011t0002g0284 | 1 | 384 | 0.0026 | -4083 | c.613 others(16): Show |
SCARB2 | ENSG00000138760.11 | transcript | ENST00000264896.8 | protein_coding | 7/12 | chr4 | TogoVar | ||||||
SH3D19_chr4_151115281_151330605 | 151147961 | A | AG | frameshift_variant | HIGH | HG00423.hp1 HG01243.hp1 HG02055.hp1 others(6): Show |
a0004a0014 | a0004c0011a0004c0012a0004c0014others(4): Show | a0004c0011t0001a0004c0012t0001a0004c0012t0009others(5): Show | a0004c0011t0001g0064a0004c0011t0001g0110a0004c0012t0001g0117others(6): Show | 9 | 282 | 0.0319 | 1 | c.204 others(5): Show |
p.Arg others(5): Show |
SH3D19 | ENSG00000109686.20 | transcript | ENST00000604030.7 | protein_coding | 11/20 | 2295/5207 | 2042/3144 | 681/1047 | chr4 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63083303 | G | A | stop_gained | HIGH | HG00423.hp2 HG01074.hp2 HG02074.hp2 others(18): Show |
a0006a0015 | a0006c0006a0015c0022 | a0006c0006t0001a0015c0022t0001 | a0006c0006t0001g0269a0006c0006t0001g0311a0006c0006t0001g0316others(18): Show | 21 | 366 | 0.0574 | 0 | c.122 others(4): Show |
p.Gln others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 7/10 | 1667/2101 | 1225/1659 | 409/552 | chr11 | TogoVar | ||
SLC25A5_chrX_119463444_119476396 | 119469670 | G | GC | frameshift_variant | HIGH | NA18978.hp2 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0008 | 1 | 324 | 0.0031 | 1 | c.123 others(4): Show |
p.Ser others(4): Show |
SLC25A5 | ENSG00000005022.6 | transcript | ENST00000317881.9 | protein_coding | 2/4 | 196/1307 | 124/897 | 42/298 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC25A5_chrX_119463444_119476396 | 119469732 | T | TG | frameshift_variant | HIGH | NA18978.hp2 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0008 | 1 | 324 | 0.0031 | 1 | c.183 others(8): Show |
p.Pro others(4): Show |
SLC25A5 | ENSG00000005022.6 | transcript | ENST00000317881.9 | protein_coding | 2/4 | 256/1307 | 184/897 | 62/298 | chrX | TogoVar | ||
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar |