regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RPS4X_chrX_72267042_72282248 | 72273834 | C | CA | frameshift_variant | HIGH | NA18987.hp1 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0027 | 1 | 316 | 0.0032 | 1 | c.498 others(4): Show |
p.Gly others(5): Show |
RPS4X | ENSG00000198034.11 | transcript | ENST00000316084.10 | protein_coding | 5/7 | 551/1474 | 498/792 | 166/263 | chrX | TogoVar | ||
RPS4X_chrX_72267042_72282248 | 72273837 | T | TC | frameshift_variant | HIGH | NA18987.hp1 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0027 | 1 | 316 | 0.0032 | 1 | c.495 others(4): Show |
p.Thr others(5): Show |
RPS4X | ENSG00000198034.11 | transcript | ENST00000316084.10 | protein_coding | 5/7 | 548/1474 | 495/792 | 165/263 | chrX | TogoVar | ||
RPS4X_chrX_72267042_72282248 | 72273899 | C | CG | frameshift_variant | HIGH | NA18987.hp1 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0027 | 1 | 316 | 0.0032 | 1 | c.433 others(4): Show |
p.Arg others(5): Show |
RPS4X | ENSG00000198034.11 | transcript | ENST00000316084.10 | protein_coding | 5/7 | 486/1474 | 433/792 | 145/263 | chrX | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TA | splice_acceptor_variant others(1): Show |
HIGH | HG00438.hp1 HG00609.hp1 HG00673.hp2 others(50): Show |
a0001a0002a0008 | a0001c0013a0002c0003a0008c0007 | a0001c0013t0002a0002c0003t0003a0008c0007t0003 | a0001c0013t0002g0012a0002c0003t0003g0021a0002c0003t0003g0022others(50): Show | 53 | 386 | 0.1373 | 1 | c.100 others(7): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00544.hp1 HG00558.hp2 others(101): Show |
a0001a0006a0007 | a0001c0001a0001c0004a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0010others(101): Show | 104 | 386 | 0.2694 | 3 | c.100 others(16): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SIGLEC12_chr19_51486227_51506800 | 51501537 | G | GC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(226): Show |
a0001a0003a0005others(3): Show | a0001c0002a0001c0003a0001c0010others(23): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0005others(27): Show | a0001c0002t0001g0001a0001c0002t0001g0004a0001c0002t0001g0012others(92): Show | 229 | 432 | 0.5301 | 1 | c.196 others(4): Show |
p.Ala others(4): Show |
SIGLEC12 | ENSG00000254521.7 | transcript | ENST00000291707.8 | protein_coding | 1/8 | 263/2269 | 196/1788 | 66/595 | chr19 | TogoVar | ||
SLC22A10_chr11_63284903_63316783 | 63290453 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(160): Show |
a0002a0011 | a0002c0002a0002c0009a0002c0012others(4): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0007others(7): Show | a0002c0002t0002g0001a0002c0002t0002g0004a0002c0002t0002g0005others(95): Show | 163 | 402 | 0.4055 | 0 | c.288 others(3): Show |
p.Trp others(3): Show |
SLC22A10 | ENSG00000184999.13 | transcript | ENST00000332793.11 | protein_coding | 1/10 | 551/2638 | 288/1626 | 96/541 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63083303 | G | A | stop_gained | HIGH | HG00423.hp2 HG01074.hp2 HG02074.hp2 others(18): Show |
a0006a0015 | a0006c0006a0015c0022 | a0006c0006t0001a0015c0022t0001 | a0006c0006t0001g0269a0006c0006t0001g0311a0006c0006t0001g0316others(18): Show | 21 | 366 | 0.0574 | 0 | c.122 others(4): Show |
p.Gln others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 7/10 | 1667/2101 | 1225/1659 | 409/552 | chr11 | TogoVar | ||
SLFN13_chr17_35430096_35453766 | 35445639 | G | T | stop_gained | HIGH | HG00099.hp1 HG00140.hp2 HG00408.hp1 others(56): Show |
a0002 | a0002c0002a0002c0014a0002c0023others(6): Show | a0002c0002t0003a0002c0002t0004a0002c0002t0011others(17): Show | a0002c0002t0003g0003a0002c0002t0003g0022a0002c0002t0003g0060others(25): Show | 59 | 456 | 0.1294 | 0 | c.42C others(2): Show |
p.Tyr others(3): Show |
SLFN13 | ENSG00000154760.14 | transcript | ENST00000285013.11 | protein_coding | 3/6 | 247/8398 | 42/2694 | 14/897 | chr17 | TogoVar | ||
SON_chr21_33538038_33582481 | 33576378 | G | GA | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | 1 | c.723 others(5): Show |
p.Ala others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7292/8393 | 7237/7281 | 2413/2426 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |
SON_chr21_33538038_33582481 | 33576390 | GA | G | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | -1 | c.724 others(5): Show |
p.Arg others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7303/8393 | 7248/7281 | 2416/2426 | chr21 | TogoVar | ||
SPATA31A3_chr9_66981304_66997550 | 66988802 | G | A | stop_gained | HIGH | NA18987.hp1 | a0048 | a0048c0059 | a0048c0059t0001 | a0048c0059t0001g0140 | 1 | 406 | 0.0025 | 0 | c.169 others(4): Show |
p.Gln others(4): Show |
SPATA31A3 | ENSG00000275969.3 | transcript | ENST00000428649.5 | protein_coding | 4/4 | 1725/4223 | 1696/4044 | 566/1347 | chr9 | TogoVar | ||
SPDYE21_chr7_67271941_67294005 | 67281505 | T | TGGGTGGC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00558.hp1 others(128): Show |
a0002a0009a0012others(2): Show | a0002c0002a0002c0010a0009c0011others(3): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0017others(6): Show | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0002t0001g0004others(50): Show | 131 | 460 | 0.2848 | 7 | c.514 others(14): Show |
p.Glu others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 4/9 | 1065/3286 | 521/1209 | 174/402 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
SPDYE3_chr7_100302702_100327196 | 100313637 | GATTGCTT others(1385): Show |
G | exon_loss_variant others(4): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00639.hp2 others(18): Show |
a0002a0003 | a0002c0004a0002c0006a0003c0012 | a0002c0004t0002a0002c0004t0005a0002c0004t0014others(2): Show | a0002c0004t0002g0008a0002c0004t0002g0044a0002c0004t0002g0185others(13): Show | 21 | 344 | 0.0611 | -1392 | c.982 others(16): Show |
SPDYE3 | ENSG00000214300.7 | transcript | ENST00000332397.6 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
SPHK1_chr17_76379609_76392855 | 76387557 | C | T | stop_gained | HIGH | NA18939.hp2 NA18987.hp2 |
a0003 | a0003c0006 | a0003c0006t0001 | a0003c0006t0001g0001 | 2 | 412 | 0.0049 | 0 | c.112 others(4): Show |
p.Gln others(4): Show |
SPHK1 | ENSG00000176170.14 | transcript | ENST00000592299.6 | protein_coding | 6/6 | 1518/1816 | 1126/1155 | 376/384 | chr17 | TogoVar | ||
ST6GAL2_chr2_106796600_106891167 | 106843196 | A | ACG | frameshift_variant | HIGH | HG01169.hp2 HG01934.hp1 HG01993.hp2 others(5): Show |
a0008a0010 | a0008c0014a0008c0015a0008c0028others(3): Show | a0008c0014t0008a0008c0014t0018a0008c0015t0088others(5): Show | a0008c0014t0008g0284a0008c0014t0018g0024a0008c0015t0088g0245others(5): Show | 8 | 372 | 0.0215 | 2 | c.780 others(9): Show |
p.Val others(5): Show |
ST6GAL2 | ENSG00000144057.16 | transcript | ENST00000409382.8 | protein_coding | 2/6 | 913/6800 | 781/1590 | 261/529 | chr2 | TogoVar | ||
STRC_chr15_43594563_43623800 | 43614194 | ACCTGCAG others(5): Show |
A | frameshift_variant others(3): Show |
HIGH | HG02071.hp2 HG02148.hp2 HG02155.hp2 others(14): Show |
a0004 | a0004c0003 | a0004c0003t0001 | a0004c0003t0001g0003a0004c0003t0001g0027a0004c0003t0001g0095others(3): Show | 17 | 374 | 0.0455 | -12 | c.230 others(23): Show |
p.Lys others(5): Show |
STRC | ENSG00000242866.10 | transcript | ENST00000450892.7 | protein_coding | 6/29 | 2303/5328 | 768/1775 | chr15 | TogoVar | |||
SUN2_chr22_38729734_38760998 | 38749811 | C | CG | frameshift_variant | HIGH | HG01433.hp1 HG01928.hp1 HG03471.hp2 others(7): Show |
a0005a0009 | a0005c0006a0005c0010a0005c0011others(2): Show | a0005c0006t0001a0005c0006t0004a0005c0006t0011others(4): Show | a0005c0006t0001g0072a0005c0006t0001g0103a0005c0006t0004g0052others(7): Show | 10 | 350 | 0.0286 | 1 | c.568 others(4): Show |
p.Arg others(5): Show |
SUN2 | ENSG00000100242.16 | transcript | ENST00000689035.1 | protein_coding | 6/18 | 841/3960 | 568/2154 | 190/717 | chr22 | TogoVar | ||
TBC1D19_chr4_26579084_26761223 | 26735441 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(270): Show | 274 | 310 | 0.8839 | 1 | c.108 others(7): Show |
TBC1D19 | ENSG00000109680.11 | transcript | ENST00000264866.9 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
TCF19_chr6_31153589_31169215 | 31161820 | T | TC | frameshift_variant | HIGH | HG00280.hp2 HG00673.hp2 HG02027.hp2 others(11): Show |
a0005a0006a0009others(1): Show | a0005c0006a0006c0007a0009c0015others(1): Show | a0005c0006t0002a0005c0006t0008a0006c0007t0001others(6): Show | a0005c0006t0002g0002a0005c0006t0002g0005a0005c0006t0008g0005others(8): Show | 14 | 451 | 0.0310 | 1 | c.615 others(4): Show |
p.Ala others(5): Show |
TCF19 | ENSG00000137310.13 | transcript | ENST00000376257.8 | protein_coding | 3/4 | 1323/3243 | 616/1038 | 206/345 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
TCHHL1_chr1_152079141_152094064 | 152085716 | G | A | stop_gained | HIGH | HG00642.hp2 HG01167.hp1 HG01169.hp1 others(26): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0002 | 29 | 376 | 0.0771 | 0 | c.196 others(4): Show |
p.Gln others(4): Show |
TCHHL1 | ENSG00000182898.4 | transcript | ENST00000368806.2 | protein_coding | 3/3 | 2031/3606 | 1966/2715 | 656/904 | chr1 | TogoVar | ||
TLR8_chrX_12901620_12928169 | 12906707 | A | G | start_lost others(1): Show |
HIGH | HG00099.hp2 HG00423.hp1 HG00438.hp1 others(162): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0004a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0008a0001c0004t0001others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0011others(44): Show | 165 | 303 | 0.5446 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
TLR8 | ENSG00000101916.12 | transcript | ENST00000218032.7 | protein_coding | 1/2 | 88/4216 | 1/3126 | 1/1041 | chrX | TogoVar | ||
TMPRSS4_chr11_118072078_118126890 | 118094815 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(127): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0012others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0092a0001c0001t0002g0190a0001c0001t0003g0009others(124): Show | 130 | 406 | 0.3202 | 0 | c.4-1 others(3): Show |
TMPRSS4 | ENSG00000137648.19 | transcript | ENST00000437212.8 | protein_coding | 1/12 | chr11 | TogoVar | ||||||
TMPRSS6_chr22_37060436_37114713 | 37069345 | CTGGGG | C | splice_acceptor_variant others(2): Show |
HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(122): Show |
a0001a0002a0003others(2): Show | a0001c0005a0001c0006a0001c0009others(21): Show | a0001c0005t0001a0001c0005t0002a0001c0006t0001others(22): Show | a0001c0005t0001g0082a0001c0005t0001g0120a0001c0005t0001g0121others(118): Show | 125 | 348 | 0.3592 | -5 | c.184 others(18): Show |
TMPRSS6 | ENSG00000187045.19 | transcript | ENST00000676104.1 | protein_coding | 15/17 | chr22 | TogoVar | ||||||
TNK1_chr17_7376089_7394742 | 7387376 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00438.hp2 others(53): Show |
a0001a0003a0009others(3): Show | a0001c0001a0001c0002a0001c0031others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0031t0001others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0043a0001c0001t0001g0048others(15): Show | 56 | 452 | 0.1239 | 0 | c.139 others(6): Show |
TNK1 | ENSG00000174292.13 | transcript | ENST00000688331.1 | protein_coding | 9/12 | chr17 | TogoVar | ||||||
TPST2_chr22_26516996_26595132 | 26541248 | A | AC | frameshift_variant | HIGH | HG00597.hp2 HG00621.hp1 HG00673.hp2 others(23): Show |
a0002 | a0002c0002a0002c0011a0002c0012others(1): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(12): Show | a0002c0002t0001g0012a0002c0002t0001g0026a0002c0002t0001g0092others(23): Show | 26 | 400 | 0.0650 | 1 | c.382 others(4): Show |
p.Val others(5): Show |
TPST2 | ENSG00000128294.16 | transcript | ENST00000338754.9 | protein_coding | 3/7 | 622/5653 | 382/1134 | 128/377 | chr22 | TogoVar | ||
TRIM51G_chr11_48970498_48988885 | 48978871 | C | G | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(271): Show |
a0001a0003a0005others(5): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0006t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(74): Show | 274 | 424 | 0.6462 | 0 | c.738 others(5): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/6 | chr11 | TogoVar | ||||||
TRIM51G_chr11_48970498_48988885 | 48979006 | G | A | stop_gained | HIGH | HG00099.hp1 HG00408.hp1 HG00438.hp1 others(136): Show |
a0002a0012a0013 | a0002c0002a0002c0004a0002c0015others(3): Show | a0002c0002t0002a0002c0004t0002a0002c0015t0002others(3): Show | a0002c0002t0002g0005a0002c0002t0002g0007a0002c0002t0002g0009others(58): Show | 139 | 424 | 0.3278 | 0 | c.604 others(3): Show |
p.Gln others(4): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/7 | 755/1510 | 604/1359 | 202/452 | chr11 | TogoVar | ||
TTN_chr2_178520989_178812423 | 178655278 | ATATCTCA others(4253): Show |
A | exon_loss_variant | HIGH | HG01099.hp1 HG01978.hp2 HG02300.hp2 others(4): Show |
a0085a0100a0102others(4): Show | a0085c0049a0100c0133a0102c0130others(4): Show | a0085c0049t0001a0100c0133t0002a0102c0130t0002others(4): Show | a0085c0049t0001g0131a0100c0133t0002g0233a0102c0130t0002g0103others(4): Show | 7 | 242 | 0.0289 | -4260 | c.372 others(19): Show |
TTN | ENSG00000155657.29 | transcript | ENST00000589042.5 | protein_coding | 189/363 | chr2 | TogoVar | ||||||
UBA7_chr3_49800209_49818953 | 49811266 | TGCCCACC others(6): Show |
T | frameshift_variant others(3): Show |
HIGH | NA18987.hp2 | a0009 | a0009c0005 | a0009c0005t0002 | a0009c0005t0002g0017 | 1 | 344 | 0.0029 | -13 | c.111 others(24): Show |
p.Leu others(5): Show |
UBA7 | ENSG00000182179.13 | transcript | ENST00000333486.4 | protein_coding | 9/24 | 1116/3039 | 372/1012 | chr3 | TogoVar | |||
UBXN2B_chr8_58406361_58456501 | 58432854 | GGTTCAAT others(329): Show |
G | frameshift_variant others(3): Show |
HIGH | NA18987.hp1 | a0004 | a0004c0006 | a0004c0006t0004 | a0004c0006t0004g0105 | 1 | 414 | 0.0024 | -336 | c.340 others(11): Show |
p.Ser others(5): Show |
UBXN2B | ENSG00000215114.10 | transcript | ENST00000399598.7 | protein_coding | 4/8 | 340/996 | 114/331 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||
USP17L17_chr4_9238879_9250471 | 9244315 | C | A | stop_gained | HIGH | HG00140.hp2 HG00323.hp1 HG01257.hp2 others(7): Show |
a0006 | a0006c0007a0006c0052a0006c0053 | a0006c0007t0000a0006c0052t0000a0006c0053t0000 | a0006c0007t0000g0000a0006c0052t0000g0000a0006c0053t0000g0000 | 10 | 199 | 0.0503 | 0 | c.437 others(3): Show |
p.Ser others(4): Show |
USP17L17 | ENSG00000249104.3 | transcript | ENST00000511568.1 | protein_coding | 1/1 | 437/1593 | 437/1593 | 146/530 | chr4 | TogoVar | ||
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
WDR13_chrX_48592492_48613869 | 48604270 | A | AG | frameshift_variant others(1): Show |
HIGH | NA18987.hp2 | a0006 | a0006c0009 | a0006c0009t0034 | a0006c0009t0034g0044 | 1 | 310 | 0.0032 | 1 | c.115 others(5): Show |
p.Val others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 9/10 | 1319/5457 | 1157/1458 | 386/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48604318 | A | AT | frameshift_variant | HIGH | NA18987.hp2 | a0006 | a0006c0009 | a0006c0009t0034 | a0006c0009t0034g0044 | 1 | 310 | 0.0032 | 1 | c.120 others(5): Show |
p.Glu others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 9/10 | 1365/5457 | 1203/1458 | 401/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48604889 | G | GAAT | stop_gained others(1): Show |
HIGH | NA18987.hp2 | a0006 | a0006c0009 | a0006c0009t0034 | a0006c0009t0034g0044 | 1 | 310 | 0.0032 | 3 | c.131 others(12): Show |
p.Glu others(16): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 10/10 | 1479/5457 | 1317/1458 | 439/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48604894 | G | GT | frameshift_variant | HIGH | NA18987.hp2 | a0006 | a0006c0009 | a0006c0009t0034 | a0006c0009t0034g0044 | 1 | 310 | 0.0032 | 1 | c.132 others(10): Show |
p.Ala others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 10/10 | 1483/5457 | 1321/1458 | 441/485 | chrX | TogoVar | ||
WDR13_chrX_48592492_48613869 | 48605018 | C | CG | frameshift_variant | HIGH | NA18987.hp2 | a0006 | a0006c0009 | a0006c0009t0034 | a0006c0009t0034g0044 | 1 | 310 | 0.0032 | 1 | c.144 others(5): Show |
p.Glu others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 10/10 | 1610/5457 | 1448/1458 | 483/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WWTR1_chr3_149512235_149663025 | 149520808 | C | CTTAA | frameshift_variant others(1): Show |
HIGH | HG00408.hp2 HG00438.hp1 HG01167.hp2 others(40): Show |
a0001a0002a0007 | a0001c0002a0002c0004a0007c0007 | a0001c0002t0003a0001c0002t0015a0001c0002t0017others(6): Show | a0001c0002t0003g0035a0001c0002t0003g0038a0001c0002t0003g0044others(40): Show | 43 | 334 | 0.1287 | 4 | c.119 others(13): Show |
p.Ter others(5): Show |
WWTR1 | ENSG00000018408.15 | transcript | ENST00000360632.8 | protein_coding | 7/7 | 1463/5037 | 1199/1203 | 400/400 | chr3 | TogoVar | ||
XPNPEP2_chrX_129733979_129774536 | 129746618 | TG | T | frameshift_variant | HIGH | NA18987.hp1 | a0027 | a0027c0007 | a0027c0007t0020 | a0027c0007t0020g0015 | 1 | 310 | 0.0032 | -1 | c.429 others(4): Show |
p.Trp others(5): Show |
XPNPEP2 | ENSG00000122121.12 | transcript | ENST00000371106.4 | protein_coding | 6/21 | 664/3311 | 429/2025 | 143/674 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
XPNPEP2_chrX_129733979_129774536 | 129746637 | CT | C | frameshift_variant | HIGH | NA18987.hp1 | a0027 | a0027c0007 | a0027c0007t0020 | a0027c0007t0020g0015 | 1 | 310 | 0.0032 | -1 | c.447 others(4): Show |
p.Ala others(5): Show |
XPNPEP2 | ENSG00000122121.12 | transcript | ENST00000371106.4 | protein_coding | 6/21 | 682/3311 | 447/2025 | 149/674 | chrX | TogoVar | ||
ZNF233_chr19_44254886_44280317 | 44274642 | CG | C | frameshift_variant | HIGH | HG00323.hp1 HG00544.hp1 HG00597.hp1 others(137): Show |
a0000 | a0000c0003a0000c0004a0000c0005others(2): Show | a0000c0003t0001a0000c0004t0001a0000c0005t0001others(2): Show | a0000c0003t0001g0002a0000c0003t0001g0005a0000c0003t0001g0008others(90): Show | 140 | 408 | 0.3431 | -1 | c.198 others(5): Show |
p.Leu others(5): Show |
ZNF233 | ENSG00000159915.13 | transcript | ENST00000683810.1 | protein_coding | 5/5 | 2083/2757 | 1983/2013 | 661/670 | chr19 | TogoVar | ||
ZNF302_chr19_34672678_34691396 | 34682775 | AG | A | frameshift_variant others(1): Show |
HIGH | HG00609.hp2 HG02129.hp2 NA18987.hp1 others(2): Show |
a0001 | a0001c0005 | a0001c0005t0002 | a0001c0005t0002g0026a0001c0005t0002g0050a0001c0005t0002g0051 | 5 | 442 | 0.0113 | -1 | c.10d others(3): Show |
p.Val others(3): Show |
ZNF302 | ENSG00000089335.22 | transcript | ENST00000505242.6 | protein_coding | 3/5 | 504/2853 | 10/1200 | 4/399 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |
ZNF443_chr19_12424706_12446021 | 12431549 | C | CA | frameshift_variant | HIGH | HG02027.hp2 HG02559.hp1 HG03139.hp2 others(5): Show |
a0004a0006a0010 | a0004c0009a0004c0024a0006c0010others(1): Show | a0004c0009t0001a0004c0024t0001a0006c0010t0002others(1): Show | a0004c0009t0001g0110a0004c0009t0001g0112a0004c0009t0001g0115others(4): Show | 8 | 410 | 0.0195 | 1 | c.622 others(4): Show |
p.Trp others(5): Show |
ZNF443 | ENSG00000180855.16 | transcript | ENST00000301547.10 | protein_coding | 4/4 | 729/2573 | 622/2016 | 208/671 | chr19 | TogoVar | ||
ZNF540_chr19_37589876_37619179 | 37613179 | ACCCTATG others(9): Show |
A | frameshift_variant | HIGH | NA18987.hp2 | a0004 | a0004c0008 | a0004c0008t0004 | a0004c0008t0004g0066 | 1 | 346 | 0.0029 | -16 | c.190 others(25): Show |
p.Pro others(5): Show |
ZNF540 | ENSG00000171817.17 | transcript | ENST00000316433.9 | protein_coding | 5/5 | 2192/3191 | 1900/1983 | 634/660 | chr19 | TogoVar | ||
ZNF787_chr19_56082366_56126295 | 56088414 | G | GC | frameshift_variant | HIGH | HG02738.hp2 HG02895.hp2 HG03209.hp1 others(6): Show |
a0000 | a0000c0014a0000c0017a0000c0021others(4): Show | a0000c0014t0002a0000c0014t0004a0000c0014t0084others(6): Show | a0000c0014t0002g0263a0000c0014t0004g0167a0000c0014t0084g0080others(6): Show | 9 | 410 | 0.0220 | 1 | c.757 others(4): Show |
p.Ala others(5): Show |
ZNF787 | ENSG00000142409.6 | transcript | ENST00000610935.2 | protein_coding | 3/3 | 891/1940 | 757/1149 | 253/382 | chr19 | TogoVar | ||
ZNG1E_chr9_65670928_65739041 | 65731675 | G | T | stop_gained | HIGH | HG00423.hp1 HG00639.hp2 HG01069.hp2 others(53): Show |
a0002a0006 | a0002c0002a0006c0010 | a0002c0002t0002a0002c0002t0006a0006c0010t0002 | a0002c0002t0002g0003a0002c0002t0002g0006a0002c0002t0002g0014others(52): Show | 56 | 202 | 0.2772 | 0 | c.862 others(3): Show |
p.Glu others(4): Show |
ZNG1E | ENSG00000147996.17 | transcript | ENST00000382405.8 | protein_coding | 12/15 | 911/1662 | 862/1188 | 288/395 | chr9 | TogoVar | ||
ZNG1E_chr9_65670928_65739041 | 65733107 | C | T | stop_gained | HIGH | HG00423.hp1 HG00639.hp2 HG01069.hp2 others(53): Show |
a0002a0006 | a0002c0002a0006c0010 | a0002c0002t0002a0002c0002t0006a0006c0010t0002 | a0002c0002t0002g0003a0002c0002t0002g0006a0002c0002t0002g0014others(52): Show | 56 | 202 | 0.2772 | 0 | c.106 others(4): Show |
p.Arg others(4): Show |
ZNG1E | ENSG00000147996.17 | transcript | ENST00000382405.8 | protein_coding | 14/15 | 1115/1662 | 1066/1188 | 356/395 | chr9 | TogoVar |