regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
OR52B4_chr11_4362263_4373386 | 4368174 | AG | A | frameshift_variant | HIGH | HG00099.hp2 HG00323.hp1 HG00408.hp2 others(171): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0004 | a0002c0002t0001g0000a0002c0002t0004g0000 | 174 | 466 | 0.3734 | -1 | c.121 others(4): Show |
p.Leu others(4): Show |
OR52B4 | ENSG00000221996.6 | transcript | ENST00000624801.3 | protein_coding | 1/1 | 212/1124 | 121/945 | 41/314 | chr11 | TogoVar | ||
OR52D1_chr11_5483685_5494749 | 5489310 | G | GGGCT | frameshift_variant | HIGH | HG00099.hp2 HG00280.hp1 HG00323.hp2 others(45): Show |
a0004a0012 | a0004c0006a0004c0017a0004c0018others(1): Show | a0004c0006t0001a0004c0017t0001a0004c0018t0001others(1): Show | a0004c0006t0001g0000a0004c0017t0001g0000a0004c0018t0001g0000others(1): Show | 48 | 470 | 0.1021 | 4 | c.605 others(11): Show |
p.Thr others(5): Show |
OR52D1 | ENSG00000181609.5 | transcript | ENST00000322641.5 | protein_coding | 1/1 | 631/1065 | 609/957 | 203/318 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR5AR1_chr11_56658686_56669618 | 56663740 | C | T | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(300): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0000a0001c0003t0000a0001c0005t0000others(2): Show | a0001c0001t0000g0000a0001c0003t0000g0000a0001c0005t0000g0000others(2): Show | 303 | 432 | 0.7014 | 0 | c.55C others(2): Show |
p.Gln others(3): Show |
OR5AR1 | ENSG00000172459.5 | transcript | ENST00000624596.2 | protein_coding | 1/1 | 55/933 | 55/933 | 19/310 | chr11 | TogoVar | ||
OR5B17_chr11_58353124_58364069 | 58359006 | G | A | stop_gained | HIGH | HG00423.hp2 HG02074.hp2 HG02132.hp2 others(11): Show |
a0004 | a0004c0004 | a0004c0004t0000 | a0004c0004t0000g0000 | 14 | 380 | 0.0368 | 0 | c.64C others(2): Show |
p.Gln others(3): Show |
OR5B17 | ENSG00000197786.3 | transcript | ENST00000357377.3 | protein_coding | 1/1 | 64/946 | 64/945 | 22/314 | chr11 | TogoVar | ||
OR6C1_chr12_55309343_55327364 | 55320622 | C | CA | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(169): Show |
a0002 | a0002c0002a0002c0005a0002c0007others(2): Show | a0002c0002t0001a0002c0005t0002a0002c0005t0004others(3): Show | a0002c0002t0001g0001a0002c0002t0001g0002a0002c0002t0001g0003others(50): Show | 172 | 474 | 0.3629 | 1 | c.24d others(3): Show |
p.Glu others(3): Show |
OR6C1 | ENSG00000205330.4 | transcript | ENST00000642104.1 | protein_coding | 2/2 | 315/2055 | 25/939 | 9/312 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
OR8G1_chr11_124236095_124259364 | 124250452 | C | G | stop_gained | HIGH | HG00099.hp1 HG00323.hp1 HG00423.hp2 others(214): Show |
a0001a0004a0006 | a0001c0002a0001c0003a0001c0012others(2): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0007others(20): Show | a0001c0002t0003g0003a0001c0002t0003g0010a0001c0002t0003g0020others(42): Show | 217 | 430 | 0.5047 | 0 | c.777 others(3): Show |
p.Tyr others(4): Show |
OR8G1 | ENSG00000197849.7 | transcript | ENST00000641972.1 | protein_coding | 3/3 | 1143/5055 | 777/936 | 259/311 | chr11 | TogoVar | ||
OR8G1_chr11_124236095_124259364 | 124250538 | TGATTTAT others(844): Show |
T | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00423.hp2 others(214): Show |
a0001a0004a0006 | a0001c0002a0001c0003a0001c0012others(2): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0007others(20): Show | a0001c0002t0003g0003a0001c0002t0003g0010a0001c0002t0003g0020others(42): Show | 217 | 430 | 0.5047 | -851 | c.866 others(8): Show |
p.Ile others(5): Show |
OR8G1 | ENSG00000197849.7 | transcript | ENST00000641972.1 | protein_coding | 3/3 | 1232/5055 | 866/936 | 289/311 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR8K1_chr11_56341039_56351998 | 56346040 | T | C | start_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(348): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(8): Show | a0001c0001t0000a0001c0002t0000a0001c0004t0000others(8): Show | a0001c0001t0000g0000a0001c0002t0000g0000a0001c0004t0000g0000others(8): Show | 351 | 437 | 0.8032 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
OR8K1 | ENSG00000150261.5 | transcript | ENST00000279783.5 | protein_coding | 1/1 | 2/960 | 2/960 | 1/319 | chr11 | TogoVar | ||
OR8U1_chr11_56370624_56381553 | 56376094 | A | ATTTCACA others(7598): Show |
stop_gained others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00438.hp1 others(127): Show |
a0001 | a0001c0001a0001c0013 | a0001c0001t0000a0001c0013t0000 | a0001c0001t0000g0000a0001c0013t0000g0000 | 130 | 364 | 0.3571 | 7605 | c.492 others(7612): Show |
p.Phe others(7618): Show |
OR8U1 | ENSG00000172199.1 | transcript | ENST00000302270.1 | protein_coding | 1/1 | 493/930 | 493/930 | 165/309 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
ORM1_chr9_114318098_114331479 | 114322594 | CAGCTGTT others(6764): Show |
C | transcript_ablation | HIGH | NA19072.hp2 | a0000 | a0000c0000 | a0000c0000t0000 | a0000c0000t0000g0000 | 1 | 464 | 0.0022 | -6771 | c.-53 others(10): Show |
p.0? | ORM1 | ENSG00000229314.6 | transcript | ENST00000259396.9 | protein_coding | 1/6 | chr9 | TogoVar | |||||
PATE4_chr11_125828316_125845072 | 125837866 | A | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(193): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0001c0001t0012a0001c0001t0016others(2): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(21): Show | 196 | 424 | 0.4623 | 0 | c.59- others(4): Show |
PATE4 | ENSG00000237353.7 | transcript | ENST00000457514.3 | protein_coding | 1/2 | chr11 | TogoVar | ||||||
PBOV1_chr6_138210986_138223491 | 138218046 | A | AG | frameshift_variant | HIGH | HG00140.hp2 HG00408.hp1 HG00558.hp2 others(87): Show |
a0000 | a0000c0002a0000c0004 | a0000c0002t0002a0000c0002t0005a0000c0002t0009others(3): Show | a0000c0002t0002g0000a0000c0002t0005g0000a0000c0002t0009g0000others(3): Show | 90 | 384 | 0.2344 | 1 | c.349 others(4): Show |
p.Leu others(5): Show |
PBOV1 | ENSG00000254440.3 | transcript | ENST00000527246.3 | protein_coding | 1/1 | 445/2506 | 349/408 | 117/135 | chr6 | TogoVar | ||
PCARE_chr2_29056695_29079523 | 29073693 | T | TGTAAGCC others(3): Show |
frameshift_variant | HIGH | NA19072.hp2 | a0023 | a0023c0029 | a0023c0029t0006 | a0023c0029t0006g0062 | 1 | 464 | 0.0022 | 10 | c.568 others(17): Show |
p.Tyr others(5): Show |
PCARE | ENSG00000179270.7 | transcript | ENST00000331664.6 | protein_coding | 1/2 | 830/7303 | 568/3867 | 190/1288 | chr2 | TogoVar | ||
PHB2_chr12_6960327_6975664 | 6965713 | CTG | C | splice_acceptor_variant others(2): Show |
HIGH | HG03516.hp2 NA18941.hp1 NA18942.hp2 others(12): Show |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0004 | a0001c0002t0001g0005a0001c0002t0001g0022a0001c0002t0004g0021 | 15 | 378 | 0.0397 | -2 | c.873 others(13): Show |
PHB2 | ENSG00000215021.10 | transcript | ENST00000535923.6 | protein_coding | 9/9 | chr12 | TogoVar | ||||||
PLK5_chr19_1519077_1541046 | 1534043 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00280.hp1 HG00280.hp2 HG00408.hp1 others(207): Show |
a0001a0006a0007others(2): Show | a0001c0001a0001c0016a0001c0020others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0005others(160): Show | 210 | 430 | 0.4884 | 0 | c.825 others(5): Show |
PLK5 | ENSG00000185988.15 | transcript | ENST00000454744.7 | protein_coding | 13/13 | chr19 | TogoVar | ||||||
PRAMEF33_chr1_13298539_13313907 | 13307108 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(242): Show |
a0001a0003a0022others(2): Show | a0001c0001a0001c0003a0001c0005others(31): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0002others(36): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0034others(62): Show | 245 | 417 | 0.5875 | 0 | c.758 others(3): Show |
p.Trp others(4): Show |
PRAMEF33 | ENSG00000237700.2 | transcript | ENST00000437300.2 | protein_coding | 3/4 | 831/1518 | 758/1425 | 253/474 | chr1 | TogoVar | ||
PRB3_chr12_11260914_11274707 | 11267841 | AGGCGGGG others(57): Show |
A | frameshift_variant | HIGH | NA19072.hp1 | a0000 | a0000c0038 | a0000c0038t0001 | a0000c0038t0001g0057 | 1 | 443 | 0.0023 | -64 | c.344 others(71): Show |
p.Pro others(5): Show |
PRB3 | ENSG00000197870.14 | transcript | ENST00000538488.3 | protein_coding | 3/4 | 445/1227 | 344/1056 | 115/351 | chr12 | TogoVar | ||
PUDP_chrX_7043920_7153153 | 7105754 | AC | A | frameshift_variant | HIGH | NA19072.hp1 | a0004 | a0004c0010 | a0004c0010t0010 | a0004c0010t0010g0141 | 1 | 260 | 0.0039 | -1 | c.145 others(4): Show |
p.Val others(4): Show |
PUDP | ENSG00000130021.15 | transcript | ENST00000381077.10 | protein_coding | 2/4 | 185/2103 | 145/687 | 49/228 | chrX | TogoVar | ||
PWWP4_chrX_153261152_153284145 | 153276580 | TC | T | frameshift_variant | HIGH | NA19072.hp1 | a0036 | a0036c0040 | a0036c0040t0001 | a0036c0040t0001g0070 | 1 | 141 | 0.0071 | -1 | c.496 others(5): Show |
p.Pro others(6): Show |
PWWP4 | ENSG00000278803.3 | transcript | ENST00000458091.5 | protein_coding | 4/4 | 5510/8071 | 4967/6186 | 1656/2061 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RABL2A_chr2_113622266_113648392 | 113635063 | CG | C | frameshift_variant | HIGH | HG00438.hp1 HG00621.hp2 HG00735.hp2 others(38): Show |
a0002 | a0002c0002a0002c0003 | a0002c0002t0001a0002c0002t0010a0002c0002t0015others(2): Show | a0002c0002t0001g0003a0002c0002t0001g0005a0002c0002t0001g0025others(17): Show | 41 | 436 | 0.0940 | -1 | c.232 others(4): Show |
p.Ala others(4): Show |
RABL2A | ENSG00000144134.19 | transcript | ENST00000683472.1 | protein_coding | 5/9 | 420/2141 | 232/690 | 78/229 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
RARRES1_chr3_158691892_158737457 | 158732230 | CGCCTGCT others(6): Show |
C | frameshift_variant | HIGH | NA18955.hp1 NA19056.hp1 NA19072.hp1 |
a0006 | a0006c0009 | a0006c0009t0001 | a0006c0009t0001g0097a0006c0009t0001g0098a0006c0009t0001g0099 | 3 | 380 | 0.0079 | -13 | c.173 others(20): Show |
p.Leu others(4): Show |
RARRES1 | ENSG00000118849.10 | transcript | ENST00000237696.10 | protein_coding | 1/6 | 227/1713 | 173/885 | 58/294 | chr3 | TogoVar | ||
RAX2_chr19_3764089_3777228 | 3770840 | C | CG | frameshift_variant | HIGH | HG01433.hp2 HG02055.hp1 HG02148.hp2 others(15): Show |
a0000 | a0000c0002a0000c0006 | a0000c0002t0001a0000c0002t0002a0000c0002t0003others(3): Show | a0000c0002t0001g0006a0000c0002t0002g0027a0000c0002t0002g0050others(5): Show | 18 | 436 | 0.0413 | 1 | c.335 others(4): Show |
p.Ala others(5): Show |
RAX2 | ENSG00000173976.16 | transcript | ENST00000555633.3 | protein_coding | 3/3 | 669/2421 | 335/555 | 112/184 | chr19 | TogoVar | ||
REPS2_chrX_16941658_17158272 | 17077368 | TC | T | frameshift_variant | HIGH | NA19072.hp1 | a0005 | a0005c0005 | a0005c0005t0024 | a0005c0005t0024g0148 | 1 | 166 | 0.0060 | -1 | c.147 others(5): Show |
p.Leu others(5): Show |
REPS2 | ENSG00000169891.18 | transcript | ENST00000357277.8 | protein_coding | 13/18 | 1683/7978 | 1479/1983 | 493/660 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
REPS2_chrX_16941658_17158272 | 17077394 | GC | G | frameshift_variant | HIGH | NA19072.hp1 | a0005 | a0005c0005 | a0005c0005t0024 | a0005c0005t0024g0148 | 1 | 166 | 0.0060 | -1 | c.150 others(5): Show |
p.Ser others(5): Show |
REPS2 | ENSG00000169891.18 | transcript | ENST00000357277.8 | protein_coding | 13/18 | 1710/7978 | 1506/1983 | 502/660 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RHEX_chr1_206048173_206107449 | 206049268 | AAAGCATG others(5879): Show |
A | splice_donor_variant others(4): Show |
HIGH | NA18946.hp2 NA18975.hp1 NA18995.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0006a0002c0004t0006 | a0001c0001t0006g0030a0001c0001t0006g0031a0001c0001t0006g0032others(1): Show | 5 | 334 | 0.0150 | -5886 | c.-40 others(14): Show |
RHEX | ENSG00000263961.8 | transcript | ENST00000331555.10 | protein_coding | 1/6 | chr1 | TogoVar | ||||||
SERPINB11_chr18_63697960_63728893 | 63712604 | G | T | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(201): Show |
a0001a0004a0013 | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0005t0002a0001c0005t0005others(18): Show | a0001c0002t0001g0001a0001c0002t0001g0010a0001c0002t0001g0014others(79): Show | 204 | 422 | 0.4834 | 0 | c.268 others(3): Show |
p.Glu others(3): Show |
SERPINB11 | ENSG00000206072.13 | transcript | ENST00000544088.6 | protein_coding | 4/8 | 330/1735 | 268/1179 | 90/392 | chr18 | TogoVar | ||
SERPINF1_chr17_1757060_1782565 | 1777200 | G | GTTTGATT others(66): Show |
frameshift_variant others(1): Show |
HIGH | NA19072.hp2 | a0012 | a0012c0016 | a0012c0016t0001 | a0012c0016t0001g0021 | 1 | 444 | 0.0023 | 73 | c.108 others(82): Show |
p.Glu others(5): Show |
SERPINF1 | ENSG00000132386.11 | transcript | ENST00000254722.9 | protein_coding | 8/8 | 1145/1438 | 1083/1257 | 361/418 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
SFSWAP_chr12_131706090_131804738 | 131797206 | C | CG | frameshift_variant | HIGH | HG01175.hp2 HG02257.hp1 HG02559.hp1 others(2): Show |
a0000 | a0000c0005a0000c0023 | a0000c0005t0001a0000c0023t0001 | a0000c0005t0001g0120a0000c0005t0001g0121a0000c0005t0001g0199others(2): Show | 5 | 318 | 0.0157 | 1 | c.256 others(5): Show |
p.Ser others(5): Show |
SFSWAP | ENSG00000061936.10 | transcript | ENST00000261674.9 | protein_coding | 16/18 | 2706/3246 | 2566/2856 | 856/951 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9944882 | AT | A | frameshift_variant | HIGH | NA19072.hp1 | a0028 | a0028c0071 | a0028c0071t0015 | a0028c0071t0015g0082 | 1 | 256 | 0.0039 | -1 | c.455 others(5): Show |
p.Leu others(6): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 9/10 | 4673/7474 | 4556/4851 | 1519/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9946880 | TG | T | frameshift_variant | HIGH | NA19072.hp1 | a0028 | a0028c0071 | a0028c0071t0015 | a0028c0071t0015g0082 | 1 | 256 | 0.0039 | -1 | c.479 others(5): Show |
p.Gly others(6): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 10/10 | 4913/7474 | 4796/4851 | 1599/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9946898 | G | GT | frameshift_variant | HIGH | NA19072.hp1 | a0028 | a0028c0071 | a0028c0071t0015 | a0028c0071t0015g0082 | 1 | 256 | 0.0039 | 1 | c.481 others(5): Show |
p.Cys others(6): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 10/10 | 4931/7474 | 4814/4851 | 1605/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9946919 | GC | G | frameshift_variant | HIGH | NA19072.hp1 | a0028 | a0028c0071 | a0028c0071t0015 | a0028c0071t0015g0082 | 1 | 256 | 0.0039 | -1 | c.483 others(5): Show |
p.Glu others(6): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 10/10 | 4953/7474 | 4836/4851 | 1612/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SIGLEC5_chr19_51605960_51635401 | 51629822 | CCCTGCCA others(5572): Show |
C | exon_loss_variant | HIGH | HG00323.hp2 HG00423.hp2 HG00438.hp2 others(29): Show |
a0005 | a0005c0008a0005c0014a0005c0015others(4): Show | a0005c0008t0003a0005c0014t0003a0005c0014t0009others(8): Show | a0005c0008t0003g0020a0005c0008t0003g0021a0005c0008t0003g0065others(27): Show | 32 | 414 | 0.0773 | -5579 | c.-50 others(12): Show |
SIGLEC5 | ENSG00000268500.7 | transcript | ENST00000683636.1 | protein_coding | 2/9 | chr19 | TogoVar | ||||||
SLC16A4_chr1_110357857_110396026 | 110381713 | A | ATATCCAC others(4): Show |
frameshift_variant others(1): Show |
HIGH | NA19072.hp1 | a0004 | a0004c0006 | a0004c0006t0001 | a0004c0006t0001g0235 | 1 | 432 | 0.0023 | 11 | c.292 others(18): Show |
p.Tyr others(5): Show |
SLC16A4 | ENSG00000168679.18 | transcript | ENST00000369779.9 | protein_coding | 4/9 | 496/2567 | 302/1464 | 101/487 | chr1 | TogoVar | ||
SLC22A10_chr11_63284903_63316783 | 63290453 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(160): Show |
a0002a0011 | a0002c0002a0002c0009a0002c0012others(4): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0007others(7): Show | a0002c0002t0002g0001a0002c0002t0002g0004a0002c0002t0002g0005others(95): Show | 163 | 402 | 0.4055 | 0 | c.288 others(3): Show |
p.Trp others(3): Show |
SLC22A10 | ENSG00000184999.13 | transcript | ENST00000332793.11 | protein_coding | 1/10 | 551/2638 | 288/1626 | 96/541 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC25A12_chr2_171778405_171899244 | 171787802 | C | T | stop_gained | HIGH | NA19072.hp1 | a0006 | a0006c0006 | a0006c0006t0001 | a0006c0006t0001g0007 | 1 | 314 | 0.0032 | 0 | c.173 others(4): Show |
p.Trp others(4): Show |
SLC25A12 | ENSG00000115840.14 | transcript | ENST00000422440.7 | protein_coding | 16/18 | 1761/3936 | 1731/2037 | 577/678 | chr2 | TogoVar | ||
SLC25A43_chrX_119394336_119459478 | 119452067 | T | TG | frameshift_variant | HIGH | NA19072.hp1 | a0004 | a0004c0006 | a0004c0006t0001 | a0004c0006t0001g0061 | 1 | 314 | 0.0032 | 1 | c.751 others(4): Show |
p.Asp others(5): Show |
SLC25A43 | ENSG00000077713.19 | transcript | ENST00000217909.8 | protein_coding | 4/5 | 820/2507 | 752/1026 | 251/341 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar | ||
SLC6A8_chrX_153682926_153701588 | 153692007 | A | AG | frameshift_variant | HIGH | NA19072.hp1 | a0003 | a0003c0003 | a0003c0003t0035 | a0003c0003t0035g0046 | 1 | 290 | 0.0035 | 1 | c.679 others(4): Show |
p.Val others(5): Show |
SLC6A8 | ENSG00000130821.17 | transcript | ENST00000253122.10 | protein_coding | 4/13 | 1329/3931 | 680/1908 | 227/635 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC7A13_chr8_86209063_86235381 | 86214405 | TCCGACAT others(1): Show |
T | frameshift_variant others(1): Show |
HIGH | HG00438.hp1 HG00544.hp1 HG01070.hp1 others(92): Show |
a0000 | a0000c0002a0000c0015a0000c0024 | a0000c0002t0002a0000c0015t0002a0000c0024t0002 | a0000c0002t0002g0002a0000c0002t0002g0008a0000c0002t0002g0012others(18): Show | 95 | 428 | 0.2220 | -8 | c.141 others(15): Show |
p.Ter others(5): Show |
SLC7A13 | ENSG00000164893.9 | transcript | ENST00000297524.8 | protein_coding | 4/4 | 1524/1867 | 1413/1413 | 471/470 | chr8 | TogoVar | ||
SLITRK2_chrX_145812829_145834856 | 145824432 | T | TG | frameshift_variant | HIGH | NA19072.hp1 | a0005 | a0005c0013 | a0005c0013t0002 | a0005c0013t0002g0004 | 1 | 326 | 0.0031 | 1 | c.201 others(5): Show |
p.Ser others(5): Show |
SLITRK2 | ENSG00000185985.11 | transcript | ENST00000335565.6 | protein_coding | 5/5 | 3001/8421 | 2011/2538 | 671/845 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SOX8_chr16_976770_991979 | 985156 | G | GC | frameshift_variant | HIGH | HG01261.hp1 HG02056.hp2 NA18956.hp1 others(6): Show |
a0000a0002 | a0000c0006a0000c0007a0002c0018others(2): Show | a0000c0006t0001a0000c0007t0002a0000c0007t0009others(3): Show | a0000c0006t0001g0001a0000c0007t0002g0002a0000c0007t0009g0002others(3): Show | 9 | 434 | 0.0207 | 1 | c.111 others(5): Show |
p.Ala others(5): Show |
SOX8 | ENSG00000005513.11 | transcript | ENST00000293894.4 | protein_coding | 3/3 | 1270/3087 | 1117/1341 | 373/446 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
SOX9_chr17_72116020_72131416 | 72123889 | A | AC | frameshift_variant | HIGH | HG01496.hp1 HG02071.hp2 HG02145.hp1 others(8): Show |
a0000 | a0000c0003a0000c0008a0000c0015 | a0000c0003t0001a0000c0003t0002a0000c0003t0003others(6): Show | a0000c0003t0001g0002a0000c0003t0002g0001a0000c0003t0003g0001others(6): Show | 11 | 402 | 0.0274 | 1 | c.103 others(5): Show |
p.Gln others(5): Show |
SOX9 | ENSG00000125398.8 | transcript | ENST00000245479.3 | protein_coding | 3/3 | 1410/3931 | 1038/1530 | 346/509 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
SPATA31F3_chr9_34884066_34900764 | 34893048 | GC | G | frameshift_variant | HIGH | HG00099.hp2 HG00642.hp2 HG00733.hp2 others(40): Show |
a0004 | a0004c0004 | a0004c0004t0001 | a0004c0004t0001g0005a0004c0004t0001g0042a0004c0004t0001g0043 | 43 | 434 | 0.0991 | -1 | c.355 others(4): Show |
p.Ala others(5): Show |
SPATA31F3 | ENSG00000187791.13 | transcript | ENST00000340783.11 | protein_coding | 4/5 | 397/967 | 355/627 | 119/208 | chr9 | TogoVar | ||
SPSB2_chr12_6865935_6878303 | 6872998 | C | T | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00544.hp2 HG00609.hp2 others(74): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0016others(7): Show | 77 | 398 | 0.1935 | 0 | c.-96 others(5): Show |
SPSB2 | ENSG00000111671.10 | transcript | ENST00000524270.6 | protein_coding | 1/2 | chr12 | TogoVar | ||||||
SSX5_chrX_48181220_48201795 | 48187717 | TC | T | frameshift_variant | HIGH | NA19072.hp1 | a0005 | a0005c0006 | a0005c0006t0002 | a0005c0006t0002g0090 | 1 | 326 | 0.0031 | -1 | c.480 others(4): Show |
p.Lys others(5): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 7/8 | 565/1293 | 480/567 | 160/188 | chrX | TogoVar | ||
TAP2_chr6_32820415_32843739 | 32828908 | A | G | stop_lost | HIGH | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(156): Show |
a0000 | a0000c0002a0000c0006a0000c0008others(19): Show | a0000c0002t0001a0000c0002t0003a0000c0002t0025others(28): Show | a0000c0002t0001g0001a0000c0002t0001g0037a0000c0002t0001g0040others(70): Show | 159 | 485 | 0.3278 | 0 | c.205 others(4): Show |
p.Ter others(11): Show |
TAP2 | ENSG00000204267.19 | transcript | ENST00000374897.4 | protein_coding | 12/12 | 2150/5643 | 2059/2061 | 687/686 | chr6 | TogoVar | ||
TBC1D19_chr4_26579084_26761223 | 26735441 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(270): Show | 274 | 310 | 0.8839 | 1 | c.108 others(7): Show |
TBC1D19 | ENSG00000109680.11 | transcript | ENST00000264866.9 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
TEX13C_chrX_125314871_125330214 | 125320566 | T | TGAGA | frameshift_variant | HIGH | NA19072.hp1 | a0010 | a0010c0013 | a0010c0013t0001 | a0010c0013t0001g0001 | 1 | 303 | 0.0033 | 4 | c.450 others(11): Show |
p.Ser others(5): Show |
TEX13C | ENSG00000282815.2 | transcript | ENST00000695840.1 | protein_coding | 1/2 | 703/4765 | 454/2982 | 152/993 | INFO_REALIGN_3_PRIME | chrX | TogoVar |