regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PHF7_chr3_52405660_52428641 | 52423087 | C | CCA | splice_acceptor_variant others(1): Show |
HIGH | HG02523.hp2 HG04204.hp2 NA19058.hp2 others(3): Show |
a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0012a0001c0003t0002g0039 | 6 | 362 | 0.0166 | 2 | c.920 others(13): Show |
PHF7 | ENSG00000010318.22 | transcript | ENST00000327906.8 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
PHKA2_chrX_18887298_18989114 | 18906578 | A | AC | frameshift_variant | HIGH | NA19089.hp1 | a0009 | a0009c0012 | a0009c0012t0001 | a0009c0012t0001g0192 | 1 | 201 | 0.0050 | 1 | c.272 others(10): Show |
p.Leu others(5): Show |
PHKA2 | ENSG00000044446.12 | transcript | ENST00000379942.5 | protein_coding | 25/33 | 2904/5077 | 2722/3708 | 908/1235 | chrX | TogoVar | ||
PIGB_chr15_55314222_55360648 | 55355277 | T | TGCTTCTA others(4): Show |
frameshift_variant others(1): Show |
HIGH | NA19089.hp2 | a0010 | a0010c0012 | a0010c0012t0005 | a0010c0012t0005g0220 | 1 | 376 | 0.0027 | 11 | c.151 others(22): Show |
p.Glu others(5): Show |
PIGB | ENSG00000069943.10 | transcript | ENST00000164305.10 | protein_coding | 12/12 | 1548/1910 | 1519/1665 | 507/554 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |
PITRM1_chr10_3132728_3177782 | 3166375 | T | TGCACGCT others(18): Show |
frameshift_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(277): Show |
a0001a0003a0006others(1): Show | a0001c0001a0001c0002a0001c0005others(43): Show | a0001c0001t0001a0001c0002t0001a0001c0005t0002others(44): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(208): Show | 280 | 446 | 0.6278 | 25 | c.271 others(32): Show |
p.Gln others(4): Show |
PITRM1 | ENSG00000107959.17 | transcript | ENST00000224949.9 | protein_coding | 4/27 | 281/3427 | 271/3114 | 91/1037 | chr10 | TogoVar | ||
PLK4_chr4_127875893_127904224 | 127891075 | G | GT | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00438.hp2 HG00544.hp1 others(76): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0003a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0007a0001c0003t0001others(4): Show | a0001c0001t0001g0086a0001c0001t0001g0096a0001c0001t0001g0111others(43): Show | 79 | 364 | 0.2170 | 1 | c.183 others(7): Show |
PLK4 | ENSG00000142731.11 | transcript | ENST00000270861.10 | protein_coding | 7/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
PLXNB3_chrX_153759249_153784341 | 153767463 | GC | G | frameshift_variant | HIGH | NA19089.hp1 | a0030 | a0030c0058 | a0030c0058t0001 | a0030c0058t0001g0052 | 1 | 308 | 0.0033 | -1 | c.639 others(4): Show |
p.Phe others(5): Show |
PLXNB3 | ENSG00000198753.12 | transcript | ENST00000361971.10 | protein_coding | 3/36 | 760/6153 | 639/5730 | 213/1909 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNB3_chrX_153759249_153784341 | 153767584 | GC | G | frameshift_variant | HIGH | NA19089.hp1 | a0030 | a0030c0058 | a0030c0058t0001 | a0030c0058t0001g0052 | 1 | 308 | 0.0033 | -1 | c.760 others(4): Show |
p.Arg others(5): Show |
PLXNB3 | ENSG00000198753.12 | transcript | ENST00000361971.10 | protein_coding | 3/36 | 881/6153 | 760/5730 | 254/1909 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNB3_chrX_153759249_153784341 | 153767731 | G | GT | frameshift_variant | HIGH | NA19089.hp1 | a0030 | a0030c0058 | a0030c0058t0001 | a0030c0058t0001g0052 | 1 | 308 | 0.0033 | 1 | c.905 others(4): Show |
p.Phe others(5): Show |
PLXNB3 | ENSG00000198753.12 | transcript | ENST00000361971.10 | protein_coding | 3/36 | 1027/6153 | 906/5730 | 302/1909 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PNPLA4_chrX_7893247_7932413 | 7900786 | TG | T | frameshift_variant | HIGH | NA19089.hp1 | a0000 | a0000c0005 | a0000c0005t0079 | a0000c0005t0079g0195 | 1 | 338 | 0.0030 | -1 | c.661 others(4): Show |
p.Gln others(5): Show |
PNPLA4 | ENSG00000006757.12 | transcript | ENST00000381042.9 | protein_coding | 7/7 | 802/3342 | 661/762 | 221/253 | chrX | TogoVar | ||
POMZP3_chr7_76604986_76632279 | 76611468 | CA | C | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(209): Show |
a0000 | a0000c0002a0000c0004a0000c0005others(6): Show | a0000c0002t0002a0000c0002t0003a0000c0002t0004others(25): Show | a0000c0002t0002g0003a0000c0002t0002g0007a0000c0002t0002g0014others(183): Show | 212 | 423 | 0.5012 | -1 | c.560 others(4): Show |
p.Leu others(5): Show |
POMZP3 | ENSG00000146707.15 | transcript | ENST00000310842.9 | protein_coding | 6/7 | 1283/1528 | 560/564 | 187/187 | chr7 | TogoVar | ||
POU3F2_chr6_98829574_98844458 | 98835104 | C | CG | frameshift_variant | HIGH | HG00408.hp1 HG00597.hp1 HG00597.hp2 others(44): Show |
a0002 | a0002c0002a0002c0004 | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(7): Show | a0002c0002t0001g0000a0002c0002t0002g0000a0002c0002t0004g0000others(7): Show | 47 | 436 | 0.1078 | 1 | c.239 others(4): Show |
p.Gly others(4): Show |
POU3F2 | ENSG00000184486.10 | transcript | ENST00000328345.8 | protein_coding | 1/1 | 540/4885 | 240/1332 | 80/443 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
POU3F4_chrX_83503290_83517127 | 83508570 | GC | G | frameshift_variant | HIGH | NA19089.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0000 | 1 | 300 | 0.0033 | -1 | c.249 others(4): Show |
p.Arg others(4): Show |
POU3F4 | ENSG00000196767.9 | transcript | ENST00000644024.2 | protein_coding | 1/1 | 284/3838 | 249/1086 | 83/361 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRAMEF25_chr1_13065774_13082884 | 13073760 | C | T | stop_gained | HIGH | NA19089.hp1 | a0009 | a0009c0026 | a0009c0026t0001 | a0009c0026t0001g0045 | 1 | 156 | 0.0064 | 0 | c.67C others(2): Show |
p.Gln others(3): Show |
PRAMEF25 | ENSG00000229571.7 | transcript | ENST00000619661.3 | protein_coding | 2/4 | 217/1919 | 67/1437 | 23/478 | chr1 | TogoVar | ||
PRAMEF4_chr1_12874212_12891201 | 12879725 | C | CG | frameshift_variant | HIGH | HG00741.hp1 HG01070.hp1 HG01070.hp2 others(14): Show |
a0005a0011 | a0005c0005a0011c0012 | a0005c0005t0003a0005c0005t0012a0011c0012t0003 | a0005c0005t0003g0019a0005c0005t0003g0020a0005c0005t0003g0032others(7): Show | 17 | 324 | 0.0525 | 1 | c.125 others(5): Show |
p.Arg others(5): Show |
PRAMEF4 | ENSG00000243073.4 | transcript | ENST00000235349.6 | protein_coding | 4/4 | 1326/1840 | 1255/1437 | 419/478 | chr1 | TogoVar | ||
PRR23D1_chr8_7534627_7547450 | 7541827 | AG | A | frameshift_variant | HIGH | HG00099.hp1 HG00408.hp2 HG00438.hp1 others(57): Show |
a0000 | a0000c0001a0000c0007a0000c0008others(2): Show | a0000c0001t0003a0000c0001t0004a0000c0001t0006others(8): Show | a0000c0001t0003g0001a0000c0001t0003g0012a0000c0001t0004g0001others(11): Show | 60 | 166 | 0.3615 | -1 | c.790 others(4): Show |
p.Val others(5): Show |
PRR23D1 | ENSG00000255251.2 | transcript | ENST00000533250.2 | protein_coding | 4/4 | 968/1588 | 790/840 | 264/279 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PTPN23_chr3_47376021_47418435 | 47411089 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00558.hp2 others(132): Show |
a0002a0004a0005others(6): Show | a0002c0003a0002c0008a0002c0009others(19): Show | a0002c0003t0001a0002c0008t0001a0002c0008t0002others(20): Show | a0002c0003t0001g0001a0002c0003t0001g0002a0002c0003t0001g0012others(118): Show | 135 | 332 | 0.4066 | 1 | c.329 others(5): Show |
p.Arg others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3373/5237 | 3297/4911 | 1099/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PVRIG_chr7_100214949_100226490 | 100221192 | A | ACT | frameshift_variant | HIGH | HG00323.hp1 HG01928.hp1 HG01943.hp2 others(13): Show |
a0003a0010 | a0003c0003a0010c0008 | a0003c0003t0002a0010c0008t0002 | a0003c0003t0002g0002a0010c0008t0002g0002 | 16 | 394 | 0.0406 | 2 | c.865 others(9): Show |
p.Pro others(5): Show |
PVRIG | ENSG00000213413.3 | transcript | ENST00000699088.1 | protein_coding | 5/5 | 889/1182 | 867/921 | 289/306 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
RABL2A_chr2_113622266_113648392 | 113635063 | CG | C | frameshift_variant | HIGH | HG00438.hp1 HG00621.hp2 HG00735.hp2 others(38): Show |
a0002 | a0002c0002a0002c0003 | a0002c0002t0001a0002c0002t0010a0002c0002t0015others(2): Show | a0002c0002t0001g0003a0002c0002t0001g0005a0002c0002t0001g0025others(17): Show | 41 | 436 | 0.0940 | -1 | c.232 others(4): Show |
p.Ala others(4): Show |
RABL2A | ENSG00000144134.19 | transcript | ENST00000683472.1 | protein_coding | 5/9 | 420/2141 | 232/690 | 78/229 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
RANBP1_chr22_20111104_20132355 | 20116392 | C | T | stop_gained | HIGH | HG00609.hp2 NA19089.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0093a0002c0002t0001g0097 | 2 | 432 | 0.0046 | 0 | c.208 others(3): Show |
p.Arg others(3): Show |
RANBP1 | ENSG00000099901.18 | transcript | ENST00000430524.6 | protein_coding | 1/6 | 289/1221 | 208/837 | 70/278 | chr22 | TogoVar | ||
RBMY1A1_chrY_21529879_21554326 | 21549006 | T | TG | frameshift_variant | HIGH | NA19063.hp1 NA19089.hp1 |
a0012a0014 | a0012c0017a0014c0018 | a0012c0017t0008a0014c0018t0007 | a0012c0017t0008g0024a0014c0018t0007g0047 | 2 | 64 | 0.0313 | 1 | c.145 others(5): Show |
p.Glu others(5): Show |
RBMY1A1 | ENSG00000234414.8 | transcript | ENST00000382707.6 | protein_coding | 12/12 | 1606/1921 | 1454/1491 | 485/496 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
RECQL5_chr17_75621854_75672154 | 75630838 | C | CTG | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(144): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0001c0021others(6): Show | a0001c0001t0001a0001c0001t0010a0001c0002t0001others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0011others(111): Show | 147 | 378 | 0.3889 | 2 | c.158 others(15): Show |
RECQL5 | ENSG00000108469.15 | transcript | ENST00000317905.10 | protein_coding | 11/19 | chr17 | TogoVar | ||||||
RENBP_chrX_153930269_153949643 | 153943551 | A | AC | frameshift_variant | HIGH | HG01928.hp1 NA18950.hp2 NA18953.hp1 others(4): Show |
a0006a0017 | a0006c0006a0017c0012 | a0006c0006t0001a0017c0012t0001 | a0006c0006t0001g0043a0006c0006t0001g0044a0006c0006t0001g0045others(4): Show | 7 | 297 | 0.0236 | 1 | c.456 others(4): Show |
p.Tyr others(5): Show |
RENBP | ENSG00000102032.13 | transcript | ENST00000393700.8 | protein_coding | 5/11 | 489/1334 | 456/1284 | 152/427 | chrX | TogoVar | ||
RNF32_chr7_156635774_156682130 | 156675865 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00438.hp2 HG00609.hp2 HG01168.hp2 others(52): Show |
a0002a0003a0004others(1): Show | a0002c0002a0003c0003a0004c0005others(1): Show | a0002c0002t0001a0003c0003t0002a0003c0003t0004others(3): Show | a0002c0002t0001g0077a0003c0003t0002g0053a0003c0003t0002g0190others(41): Show | 55 | 448 | 0.1228 | 0 | c.852 others(5): Show |
RNF32 | ENSG00000105982.17 | transcript | ENST00000317955.10 | protein_coding | 8/8 | chr7 | TogoVar | ||||||
SCRN3_chr2_174390730_174434575 | 174427852 | TTCAAATT others(6): Show |
T | frameshift_variant | HIGH | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(85): Show |
a0000 | a0000c0002a0000c0004a0000c0008 | a0000c0002t0002a0000c0002t0004a0000c0002t0012others(2): Show | a0000c0002t0002g0002a0000c0002t0002g0009a0000c0002t0002g0010others(47): Show | 88 | 364 | 0.2418 | -13 | c.125 others(22): Show |
p.Asn others(5): Show |
SCRN3 | ENSG00000144306.15 | transcript | ENST00000272732.11 | protein_coding | 8/8 | 1348/3052 | 1251/1275 | 417/424 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SHOX_chrX_625791_656584 | 631143 | G | GA | frameshift_variant | HIGH | NA19089.hp1 | a0004 | a0004c0004 | a0004c0004t0076 | a0004c0004t0076g0012 | 1 | 220 | 0.0046 | 1 | c.249 others(4): Show |
p.Glu others(4): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 1/5 | 357/7934 | 250/879 | 84/292 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC22A10_chr11_63284903_63316783 | 63290453 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(160): Show |
a0002a0011 | a0002c0002a0002c0009a0002c0012others(4): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0007others(7): Show | a0002c0002t0002g0001a0002c0002t0002g0004a0002c0002t0002g0005others(95): Show | 163 | 402 | 0.4055 | 0 | c.288 others(3): Show |
p.Trp others(3): Show |
SLC22A10 | ENSG00000184999.13 | transcript | ENST00000332793.11 | protein_coding | 1/10 | 551/2638 | 288/1626 | 96/541 | chr11 | TogoVar | ||
SLC25A36_chr3_140936836_140985995 | 140956506 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00738.hp1 HG01243.hp1 HG02559.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0008a0001c0001t0016a0001c0001t0022others(6): Show | a0001c0001t0008g0001a0001c0001t0008g0231a0001c0001t0008g0232others(11): Show | 17 | 270 | 0.0630 | 1 | c.42- others(5): Show |
SLC25A36 | ENSG00000114120.14 | transcript | ENST00000324194.12 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SLC35A2_chrX_48898183_48916646 | 48911600 | G | GC | frameshift_variant | HIGH | NA19089.hp1 | a0002 | a0002c0006 | a0002c0006t0001 | a0002c0006t0001g0048 | 1 | 295 | 0.0034 | 1 | c.36d others(3): Show |
p.Pro others(4): Show |
SLC35A2 | ENSG00000102100.16 | transcript | ENST00000247138.11 | protein_coding | 1/5 | 46/1456 | 36/1191 | 12/396 | chrX | TogoVar | ||
SLC66A1_chr1_19307326_19334300 | 19325512 | T | A | stop_gained | HIGH | NA19089.hp2 | a0006 | a0006c0012 | a0006c0012t0003 | a0006c0012t0003g0254 | 1 | 456 | 0.0022 | 0 | c.312 others(3): Show |
p.Tyr others(4): Show |
SLC66A1 | ENSG00000040487.13 | transcript | ENST00000375153.8 | protein_coding | 4/8 | 954/2175 | 312/876 | 104/291 | chr1 | TogoVar | ||
SLC6A18_chr5_1220381_1251189 | 1240642 | C | G | stop_gained | HIGH | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(178): Show |
a0001a0006a0007others(4): Show | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0002t0002a0001c0005t0001others(22): Show | a0001c0002t0001g0004a0001c0002t0001g0018a0001c0002t0001g0019others(157): Show | 181 | 456 | 0.3969 | 0 | c.957 others(3): Show |
p.Tyr others(4): Show |
SLC6A18 | ENSG00000164363.10 | transcript | ENST00000324642.4 | protein_coding | 7/12 | 1054/2095 | 957/1887 | 319/628 | chr5 | TogoVar | ||
SMARCA1_chrX_129441506_129528490 | 129487042 | TC | T | frameshift_variant | HIGH | NA19089.hp2 | a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0161 | 1 | 279 | 0.0036 | -1 | c.219 others(5): Show |
p.Gly others(5): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 17/25 | 2312/3989 | 2192/3213 | 731/1070 | chrX | TogoVar | ||
SMARCA1_chrX_129441506_129528490 | 129491962 | TG | T | frameshift_variant | HIGH | NA19089.hp2 | a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0161 | 1 | 279 | 0.0036 | -1 | c.179 others(5): Show |
p.Pro others(5): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 14/25 | 1913/3989 | 1793/3213 | 598/1070 | chrX | TogoVar | ||
SMARCA1_chrX_129441506_129528490 | 129496774 | TC | T | frameshift_variant | HIGH | NA19089.hp2 | a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0161 | 1 | 279 | 0.0036 | -1 | c.160 others(5): Show |
p.Gly others(5): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 12/25 | 1721/3989 | 1601/3213 | 534/1070 | chrX | TogoVar | ||
SMARCA1_chrX_129441506_129528490 | 129496868 | GA | G | frameshift_variant others(1): Show |
HIGH | NA19089.hp2 | a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0161 | 1 | 279 | 0.0036 | -1 | c.150 others(5): Show |
p.Ser others(5): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 12/25 | 1627/3989 | 1507/3213 | 503/1070 | chrX | TogoVar | ||
SMARCA1_chrX_129441506_129528490 | 129497930 | T | TG | frameshift_variant | HIGH | NA19089.hp2 | a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0161 | 1 | 279 | 0.0036 | 1 | c.141 others(5): Show |
p.Pro others(5): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 11/25 | 1538/3989 | 1418/3213 | 473/1070 | chrX | TogoVar | ||
SMS_chrX_21935709_21999837 | 21972512 | G | GA | frameshift_variant | HIGH | NA19089.hp2 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0193 | 1 | 298 | 0.0034 | 1 | c.272 others(4): Show |
p.Asn others(4): Show |
SMS | ENSG00000102172.16 | transcript | ENST00000404933.7 | protein_coding | 4/11 | 389/1703 | 273/1101 | 91/366 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SMS_chrX_21935709_21999837 | 21972570 | CG | C | splice_donor_variant others(1): Show |
HIGH | NA19089.hp2 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0193 | 1 | 298 | 0.0034 | -1 | c.329 others(6): Show |
SMS | ENSG00000102172.16 | transcript | ENST00000404933.7 | protein_coding | 4/10 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SPDYE21_chr7_67271941_67294005 | 67281505 | T | TGGGTGGC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00558.hp1 others(128): Show |
a0002a0009a0012others(2): Show | a0002c0002a0002c0010a0009c0011others(3): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0017others(6): Show | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0002t0001g0004others(50): Show | 131 | 460 | 0.2848 | 7 | c.514 others(14): Show |
p.Glu others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 4/9 | 1065/3286 | 521/1209 | 174/402 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
TAAR9_chr6_132533277_132544336 | 132538470 | A | T | stop_gained | HIGH | HG00140.hp2 HG00639.hp2 HG00735.hp1 others(71): Show |
a0002 | a0002c0002a0002c0006 | a0002c0002t0001a0002c0006t0001 | a0002c0002t0001g0000a0002c0006t0001g0000 | 74 | 430 | 0.1721 | 0 | c.181 others(3): Show |
p.Lys others(3): Show |
TAAR9 | ENSG00000237110.3 | transcript | ENST00000434551.3 | protein_coding | 1/1 | 194/1060 | 181/1047 | 61/348 | chr6 | TogoVar | ||
TAF11L10_chr5_17592232_17602828 | 17597711 | TGGGTGCT others(724): Show |
T | start_lost others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00408.hp2 others(147): Show |
a0002a0011 | a0002c0002a0002c0006a0011c0007 | a0002c0002t0000a0002c0006t0000a0011c0007t0000 | a0002c0002t0000g0000a0002c0006t0000g0000a0011c0007t0000g0000 | 150 | 352 | 0.4261 | -731 | c.-61 others(8): Show |
p.Met others(10): Show |
TAF11L10 | ENSG00000284356.1 | transcript | ENST00000638842.1 | protein_coding | 1/1 | 117/597 | 1/597 | 1/198 | chr5 | TogoVar | ||
TBC1D19_chr4_26579084_26761223 | 26735441 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(270): Show | 274 | 310 | 0.8839 | 1 | c.108 others(7): Show |
TBC1D19 | ENSG00000109680.11 | transcript | ENST00000264866.9 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
TDRD12_chr19_32714767_32834580 | 32826678 | AAC | A | splice_acceptor_variant others(2): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00558.hp1 others(112): Show |
a0002a0003a0005others(6): Show | a0002c0003a0002c0010a0003c0002others(7): Show | a0002c0003t0001a0002c0003t0011a0002c0003t0033others(20): Show | a0002c0003t0001g0002a0002c0003t0001g0003a0002c0003t0001g0174others(110): Show | 115 | 380 | 0.3026 | -2 | c.382 others(15): Show |
TDRD12 | ENSG00000173809.18 | transcript | ENST00000639142.2 | protein_coding | 31/32 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TEX44_chr2_231587864_231599276 | 231593752 | T | TC | frameshift_variant | HIGH | HG00438.hp1 NA18956.hp1 NA18961.hp2 others(10): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0000 | 13 | 438 | 0.0297 | 1 | c.801 others(8): Show |
p.Glu others(5): Show |
TEX44 | ENSG00000177673.4 | transcript | ENST00000313965.4 | protein_coding | 1/1 | 890/1413 | 802/1188 | 268/395 | chr2 | TogoVar | ||
THOC2_chrX_123595569_123738052 | 123627944 | AT | A | frameshift_variant | HIGH | NA19089.hp1 | a0004 | a0004c0008 | a0004c0008t0001 | a0004c0008t0001g0084 | 1 | 251 | 0.0040 | -1 | c.250 others(5): Show |
p.Lys others(5): Show |
THOC2 | ENSG00000125676.20 | transcript | ENST00000245838.13 | protein_coding | 23/39 | 2535/5600 | 2505/4782 | 835/1593 | chrX | TogoVar | ||
TIGD6_chr5_149988118_150005654 | 149995316 | CT | C | frameshift_variant | HIGH | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(190): Show |
a0001a0004a0009others(5): Show | a0001c0001a0001c0017a0004c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0001a0001c0001t0001g0015a0001c0001t0001g0020others(31): Show | 193 | 436 | 0.4427 | -1 | c.103 others(5): Show |
p.Glu others(5): Show |
TIGD6 | ENSG00000164296.7 | transcript | ENST00000296736.4 | protein_coding | 2/2 | 1294/3493 | 1032/1566 | 344/521 | chr5 | TogoVar | ||
TLR5_chr1_223104404_223148248 | 223112116 | G | A | stop_gained | HIGH | NA19059.hp1 NA19066.hp2 NA19089.hp1 |
a0007 | a0007c0009 | a0007c0009t0001 | a0007c0009t0001g0126a0007c0009t0001g0131a0007c0009t0001g0309 | 3 | 368 | 0.0082 | 0 | c.916 others(3): Show |
p.Arg others(4): Show |
TLR5 | ENSG00000187554.14 | transcript | ENST00000642603.2 | protein_coding | 6/6 | 1523/4235 | 916/2577 | 306/858 | chr1 | TogoVar | ||
TMPRSS3_chr21_42366890_42401052 | 42383199 | C | CTA | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(99): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0003a0002c0007others(6): Show | a0001c0001t0001a0002c0003t0001a0002c0003t0002others(16): Show | a0001c0001t0001g0251a0002c0003t0001g0007a0002c0003t0001g0011others(80): Show | 102 | 472 | 0.2161 | 2 | c.617 others(13): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 7/12 | chr21 | TogoVar | ||||||
TRIM38_chr6_25957802_25996231 | 25969403 | C | T | stop_gained | HIGH | NA18940.hp2 NA18941.hp2 NA18948.hp1 others(11): Show |
a0002 | a0002c0003 | a0002c0003t0016a0002c0003t0029a0002c0003t0041others(5): Show | a0002c0003t0016g0009a0002c0003t0016g0033a0002c0003t0016g0055others(9): Show | 14 | 366 | 0.0383 | 0 | c.490 others(3): Show |
p.Arg others(4): Show |
TRIM38 | ENSG00000112343.11 | transcript | ENST00000357085.5 | protein_coding | 4/8 | 966/9418 | 490/1398 | 164/465 | chr6 | TogoVar | ||
TRIM51G_chr11_48970498_48988885 | 48978871 | C | G | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(271): Show |
a0001a0003a0005others(5): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0006t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(74): Show | 274 | 424 | 0.6462 | 0 | c.738 others(5): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/6 | chr11 | TogoVar |