regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
OR8B3_chr11_124390534_124404024 | 124396801 | A | AG | frameshift_variant | HIGH | HG01167.hp2 HG01169.hp1 HG01255.hp1 others(8): Show |
a0005 | a0005c0005a0005c0020 | a0005c0005t0001a0005c0020t0001 | a0005c0005t0001g0007a0005c0020t0001g0042 | 11 | 452 | 0.0243 | 1 | c.550 others(4): Show |
p.Leu others(5): Show |
OR8B3 | ENSG00000284609.2 | transcript | ENST00000641139.1 | protein_coding | 2/2 | 902/2170 | 550/942 | 184/313 | chr11 | TogoVar | ||
OR8G1_chr11_124236095_124259364 | 124250452 | C | G | stop_gained | HIGH | HG00099.hp1 HG00323.hp1 HG00423.hp2 others(214): Show |
a0001a0004a0006 | a0001c0002a0001c0003a0001c0012others(2): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0007others(20): Show | a0001c0002t0003g0003a0001c0002t0003g0010a0001c0002t0003g0020others(42): Show | 217 | 430 | 0.5047 | 0 | c.777 others(3): Show |
p.Tyr others(4): Show |
OR8G1 | ENSG00000197849.7 | transcript | ENST00000641972.1 | protein_coding | 3/3 | 1143/5055 | 777/936 | 259/311 | chr11 | TogoVar | ||
OR8G1_chr11_124236095_124259364 | 124250538 | TGATTTAT others(844): Show |
T | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00423.hp2 others(214): Show |
a0001a0004a0006 | a0001c0002a0001c0003a0001c0012others(2): Show | a0001c0002t0003a0001c0002t0005a0001c0002t0007others(20): Show | a0001c0002t0003g0003a0001c0002t0003g0010a0001c0002t0003g0020others(42): Show | 217 | 430 | 0.5047 | -851 | c.866 others(8): Show |
p.Ile others(5): Show |
OR8G1 | ENSG00000197849.7 | transcript | ENST00000641972.1 | protein_coding | 3/3 | 1232/5055 | 866/936 | 289/311 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR8I2_chr11_56088308_56099240 | 56093801 | GT | G | frameshift_variant | HIGH | HG00099.hp1 HG00323.hp1 HG01433.hp2 others(5): Show |
a0003 | a0003c0003a0003c0004 | a0003c0003t0000a0003c0004t0000 | a0003c0003t0000g0000a0003c0004t0000g0000 | 8 | 458 | 0.0175 | -1 | c.497 others(4): Show |
p.Leu others(5): Show |
OR8I2 | ENSG00000172154.11 | transcript | ENST00000302124.8 | protein_coding | 1/1 | 497/933 | 497/933 | 166/310 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR8I2_chr11_56088308_56099240 | 56093830 | CA | C | frameshift_variant | HIGH | HG00099.hp1 HG00323.hp1 HG01433.hp2 others(5): Show |
a0003 | a0003c0003a0003c0004 | a0003c0003t0000a0003c0004t0000 | a0003c0003t0000g0000a0003c0004t0000g0000 | 8 | 458 | 0.0175 | -1 | c.524 others(4): Show |
p.His others(5): Show |
OR8I2 | ENSG00000172154.11 | transcript | ENST00000302124.8 | protein_coding | 1/1 | 524/933 | 524/933 | 175/310 | chr11 | TogoVar | ||
OR8I2_chr11_56088308_56099240 | 56094174 | C | G | stop_gained | HIGH | HG00099.hp1 HG00323.hp1 HG01433.hp2 others(5): Show |
a0003 | a0003c0003a0003c0004 | a0003c0003t0000a0003c0004t0000 | a0003c0003t0000g0000a0003c0004t0000g0000 | 8 | 458 | 0.0175 | 0 | c.867 others(3): Show |
p.Tyr others(4): Show |
OR8I2 | ENSG00000172154.11 | transcript | ENST00000302124.8 | protein_coding | 1/1 | 867/933 | 867/933 | 289/310 | chr11 | TogoVar | ||
OR8K1_chr11_56341039_56351998 | 56346040 | T | C | start_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(348): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(8): Show | a0001c0001t0000a0001c0002t0000a0001c0004t0000others(8): Show | a0001c0001t0000g0000a0001c0002t0000g0000a0001c0004t0000g0000others(8): Show | 351 | 437 | 0.8032 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
OR8K1 | ENSG00000150261.5 | transcript | ENST00000279783.5 | protein_coding | 1/1 | 2/960 | 2/960 | 1/319 | chr11 | TogoVar | ||
OR8U1_chr11_56370624_56381553 | 56376094 | A | ATTTCACA others(7599): Show |
frameshift_variant others(1): Show |
HIGH | HG01496.hp1 | a0005 | a0005c0064 | a0005c0064t0000 | a0005c0064t0000g0000 | 1 | 364 | 0.0028 | 7606 | c.590 others(7613): Show |
p.Phe others(5): Show |
OR8U1 | ENSG00000172199.1 | transcript | ENST00000302270.1 | protein_coding | 1/1 | 591/930 | 591/930 | 197/309 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR8U1_chr11_56370624_56381553 | 56376094 | A | ATTTCACA others(7597): Show |
frameshift_variant others(1): Show |
HIGH | HG00099.hp2 HG00323.hp1 HG01433.hp2 others(2): Show |
a0002 | a0002c0007 | a0002c0007t0000 | a0002c0007t0000g0000 | 5 | 364 | 0.0137 | 7604 | c.590 others(7611): Show |
p.Phe others(5): Show |
OR8U1 | ENSG00000172199.1 | transcript | ENST00000302270.1 | protein_coding | 1/1 | 591/930 | 591/930 | 197/309 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
P2RX5_chr17_3668227_3701155 | 3690982 | TG | T | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(216): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0006others(206): Show | 219 | 362 | 0.6050 | -1 | c.333 others(4): Show |
p.Asn others(5): Show |
P2RX5 | ENSG00000083454.23 | transcript | ENST00000225328.10 | protein_coding | 3/12 | 483/2060 | 333/1269 | 111/422 | chr17 | TogoVar | ||
PAK2_chr3_196734857_196837647 | 196820350 | C | CTGTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00544.hp1 HG01070.hp2 HG01496.hp1 others(9): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0006a0001c0001t0008a0001c0001t0062others(2): Show | a0001c0001t0006g0062a0001c0001t0008g0068a0001c0001t0062g0087others(9): Show | 12 | 178 | 0.0674 | 5 | c.115 others(18): Show |
PAK2 | ENSG00000180370.10 | transcript | ENST00000327134.7 | protein_coding | 12/14 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
PANK2_chr20_3884387_3934887 | 3889432 | T | A | start_lost | HIGH | HG00408.hp2 HG00735.hp2 HG01070.hp1 others(43): Show |
a0001 | a0001c0003a0001c0006 | a0001c0003t0001a0001c0003t0004a0001c0003t0010others(11): Show | a0001c0003t0001g0034a0001c0003t0004g0001a0001c0003t0004g0002others(39): Show | 46 | 422 | 0.1090 | 0 | c.2T> others(1): Show |
p.Leu others(2): Show |
PANK2 | ENSG00000125779.24 | transcript | ENST00000610179.7 | protein_coding | 1/7 | 46/8020 | 2/1383 | 1/460 | chr20 | TogoVar | ||
PDLIM2_chr8_22575475_22599298 | 22593765 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00438.hp2 others(39): Show |
a0002a0005a0008others(1): Show | a0002c0003a0002c0004a0002c0018others(4): Show | a0002c0003t0001a0002c0003t0002a0002c0004t0001others(6): Show | a0002c0003t0001g0005a0002c0003t0001g0041a0002c0003t0001g0054others(37): Show | 42 | 380 | 0.1105 | 1 | c.916 others(4): Show |
p.Arg others(5): Show |
PDLIM2 | ENSG00000120913.24 | transcript | ENST00000409417.6 | protein_coding | 9/9 | 1047/1577 | 917/1059 | 306/352 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |
PEAK3_chr19_2269631_2287175 | 2275876 | C | CG | frameshift_variant | HIGH | HG01496.hp1 HG02559.hp2 HG03098.hp1 others(3): Show |
a0000 | a0000c0006a0000c0007a0000c0019 | a0000c0006t0001a0000c0006t0006a0000c0007t0002others(2): Show | a0000c0006t0001g0122a0000c0006t0006g0104a0000c0006t0006g0108others(3): Show | 6 | 454 | 0.0132 | 1 | c.122 others(5): Show |
p.Arg others(5): Show |
PEAK3 | ENSG00000188305.6 | transcript | ENST00000342063.5 | protein_coding | 4/4 | 1318/2564 | 1225/1422 | 409/473 | chr19 | TogoVar | ||
PGPEP1L_chr15_98963229_99012792 | 98968575 | A | AC | frameshift_variant | HIGH | HG00280.hp2 HG00423.hp1 HG00438.hp2 others(166): Show |
a0000 | a0000c0002a0000c0005a0000c0010 | a0000c0002t0001a0000c0002t0002a0000c0002t0003others(16): Show | a0000c0002t0001g0001a0000c0002t0001g0003a0000c0002t0001g0004others(162): Show | 169 | 398 | 0.4246 | 1 | c.331 others(4): Show |
p.Val others(5): Show |
PGPEP1L | ENSG00000183571.11 | transcript | ENST00000535714.2 | protein_coding | 5/5 | 1134/1481 | 331/429 | 111/142 | chr15 | TogoVar | ||
PITRM1_chr10_3132728_3177782 | 3166375 | T | TGCACGCT others(18): Show |
frameshift_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(277): Show |
a0001a0003a0006others(1): Show | a0001c0001a0001c0002a0001c0005others(43): Show | a0001c0001t0001a0001c0002t0001a0001c0005t0002others(44): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(208): Show | 280 | 446 | 0.6278 | 25 | c.271 others(32): Show |
p.Gln others(4): Show |
PITRM1 | ENSG00000107959.17 | transcript | ENST00000224949.9 | protein_coding | 4/27 | 281/3427 | 271/3114 | 91/1037 | chr10 | TogoVar | ||
PKD1_chr16_2083708_2140898 | 2100445 | C | CG | frameshift_variant | HIGH | HG00423.hp1 HG00673.hp1 HG00673.hp2 others(14): Show |
a0002a0029a0030others(4): Show | a0002c0004a0002c0066a0002c0082others(9): Show | a0002c0004t0001a0002c0066t0001a0002c0082t0002others(9): Show | a0002c0004t0001g0041a0002c0004t0001g0060a0002c0004t0001g0063others(14): Show | 17 | 216 | 0.0787 | 1 | c.951 others(5): Show |
p.His others(6): Show |
PKD1 | ENSG00000008710.20 | transcript | ENST00000262304.9 | protein_coding | 27/46 | 9727/14140 | 9518/12912 | 3173/4303 | chr16 | TogoVar | ||
PKD1_chr16_2083708_2140898 | 2103757 | C | CG | frameshift_variant | HIGH | HG01069.hp2 HG01099.hp1 HG01346.hp2 others(11): Show |
a0003a0023a0030others(4): Show | a0003c0042a0003c0043a0003c0076others(11): Show | a0003c0042t0012a0003c0043t0001a0003c0076t0001others(11): Show | a0003c0042t0012g0203a0003c0043t0001g0206a0003c0076t0001g0025others(11): Show | 14 | 216 | 0.0648 | 1 | c.829 others(5): Show |
p.Arg others(6): Show |
PKD1 | ENSG00000008710.20 | transcript | ENST00000262304.9 | protein_coding | 23/46 | 8508/14140 | 8299/12912 | 2767/4303 | chr16 | TogoVar | ||
PLEC_chr8_143910153_143944597 | 143925061 | G | GC | frameshift_variant | HIGH | HG00609.hp1 HG00673.hp1 HG01192.hp1 others(25): Show |
a0005a0011a0024others(6): Show | a0005c0011a0005c0038a0005c0171others(18): Show | a0005c0011t0001a0005c0038t0001a0005c0171t0008others(18): Show | a0005c0011t0001g0019a0005c0011t0001g0045a0005c0011t0001g0163others(23): Show | 28 | 358 | 0.0782 | 1 | c.486 others(5): Show |
p.Ala others(6): Show |
PLEC | ENSG00000178209.17 | transcript | ENST00000345136.8 | protein_coding | 31/32 | 5003/14804 | 4867/13644 | 1623/4547 | chr8 | TogoVar | ||
PLEC_chr8_143910153_143978529 | 143925061 | G | GC | frameshift_variant | HIGH | HG00423.hp2 HG00673.hp1 HG01192.hp1 others(19): Show |
a0006a0009a0022others(6): Show | a0006c0014a0006c0034a0006c0150others(14): Show | a0006c0014t0001a0006c0034t0001a0006c0150t0002others(14): Show | a0006c0014t0001g0007a0006c0014t0001g0199a0006c0014t0001g0259others(19): Show | 22 | 302 | 0.0729 | 1 | c.482 others(5): Show |
p.Ala others(6): Show |
PLEC | ENSG00000178209.17 | transcript | ENST00000356346.7 | protein_coding | 31/32 | 4882/14683 | 4825/13602 | 1609/4533 | chr8 | TogoVar | ||
PLEKHA2_chr8_38896346_38978912 | 38901439 | C | CG | splice_donor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0008others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(46): Show | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0015others(332): Show | 337 | 376 | 0.8963 | 1 | c.-24 others(6): Show |
PLEKHA2 | ENSG00000169499.15 | transcript | ENST00000617275.5 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
PLXNC1_chr12_94143577_94312675 | 94303749 | T | TC | splice_acceptor_variant others(1): Show |
HIGH | HG01255.hp2 HG01346.hp1 HG01496.hp1 others(1): Show |
a0001a0008 | a0001c0001a0008c0024 | a0001c0001t0002a0008c0024t0002 | a0001c0001t0002g0037a0001c0001t0002g0046a0001c0001t0002g0103others(1): Show | 4 | 298 | 0.0134 | 1 | c.438 others(7): Show |
PLXNC1 | ENSG00000136040.9 | transcript | ENST00000258526.9 | protein_coding | 28/30 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PNPLA7_chr9_137454952_137555402 | 137501647 | CACCTGGT others(27): Show |
C | frameshift_variant others(3): Show |
HIGH | HG01496.hp2 | a0033 | a0033c0050 | a0033c0050t0001 | a0033c0050t0001g0136 | 1 | 188 | 0.0053 | -34 | c.152 others(45): Show |
p.Ala others(5): Show |
PNPLA7 | ENSG00000130653.16 | transcript | ENST00000406427.6 | protein_coding | 15/35 | 1520/4029 | 507/1342 | chr9 | TogoVar | |||
PPEF2_chr4_75854867_75907452 | 75864488 | G | A | stop_gained | HIGH | HG01496.hp2 | a0011 | a0011c0023 | a0011c0023t0002 | a0011c0023t0002g0232 | 1 | 270 | 0.0037 | 0 | c.196 others(4): Show |
p.Arg others(4): Show |
PPEF2 | ENSG00000156194.19 | transcript | ENST00000286719.12 | protein_coding | 16/17 | 2241/3343 | 1960/2262 | 654/753 | chr4 | TogoVar | ||
PRAMEF33_chr1_13298539_13313907 | 13307108 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(242): Show |
a0001a0003a0022others(2): Show | a0001c0001a0001c0003a0001c0005others(31): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0002others(36): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0034others(62): Show | 245 | 417 | 0.5875 | 0 | c.758 others(3): Show |
p.Trp others(4): Show |
PRAMEF33 | ENSG00000237700.2 | transcript | ENST00000437300.2 | protein_coding | 3/4 | 831/1518 | 758/1425 | 253/474 | chr1 | TogoVar | ||
PRM3_chr16_11268199_11278629 | 11273286 | A | G | stop_lost | HIGH | HG01496.hp1 HG02280.hp1 HG02451.hp1 others(9): Show |
a0000 | a0000c0004a0000c0007 | a0000c0004t0001a0000c0004t0002a0000c0007t0002 | a0000c0004t0001g0000a0000c0004t0002g0000a0000c0007t0002g0000 | 12 | 414 | 0.0290 | 0 | c.310 others(3): Show |
p.Ter others(11): Show |
PRM3 | ENSG00000178257.4 | transcript | ENST00000327157.4 | protein_coding | 1/1 | 344/431 | 310/312 | 104/103 | chr16 | TogoVar | ||
PRR22_chr19_5777960_5789746 | 5783689 | T | TG | frameshift_variant | HIGH | HG00642.hp2 HG01496.hp1 HG01496.hp2 others(13): Show |
a0004a0005 | a0004c0005a0005c0008a0005c0014 | a0004c0005t0001a0005c0008t0001a0005c0014t0001 | a0004c0005t0001g0008a0004c0005t0001g0030a0005c0008t0001g0016others(2): Show | 16 | 382 | 0.0419 | 1 | c.557 others(4): Show |
p.Pro others(5): Show |
PRR22 | ENSG00000212123.4 | transcript | ENST00000419421.3 | protein_coding | 3/3 | 643/1373 | 557/1269 | 186/422 | chr19 | TogoVar | ||
PRR23D1_chr8_7534627_7547450 | 7541827 | AG | A | frameshift_variant | HIGH | HG00099.hp1 HG00408.hp2 HG00438.hp1 others(57): Show |
a0000 | a0000c0001a0000c0007a0000c0008others(2): Show | a0000c0001t0003a0000c0001t0004a0000c0001t0006others(8): Show | a0000c0001t0003g0001a0000c0001t0003g0012a0000c0001t0004g0001others(11): Show | 60 | 166 | 0.3615 | -1 | c.790 others(4): Show |
p.Val others(5): Show |
PRR23D1 | ENSG00000255251.2 | transcript | ENST00000533250.2 | protein_coding | 4/4 | 968/1588 | 790/840 | 264/279 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151279866 | G | GCAGGT | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(87): Show |
a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0002a0002c0004t0001g0012a0002c0004t0001g0013others(21): Show | 90 | 428 | 0.2103 | 5 | c.127 others(12): Show |
p.Ser others(4): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 2/5 | 144/1408 | 132/987 | 44/328 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PSCA_chr8_142675495_142687725 | 142682113 | G | A | stop_gained | HIGH | HG01496.hp1 HG01516.hp1 |
a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0002 | 2 | 432 | 0.0046 | 0 | c.326 others(3): Show |
p.Trp others(4): Show |
PSCA | ENSG00000167653.5 | transcript | ENST00000301258.5 | protein_coding | 3/3 | 370/982 | 326/345 | 109/114 | chr8 | TogoVar | ||
PSG8_chr19_42749233_42770678 | 42763988 | AG | A | frameshift_variant | HIGH | HG00280.hp1 HG00609.hp2 HG00738.hp2 others(33): Show |
a0003a0009a0011others(3): Show | a0003c0003a0003c0005a0003c0013others(6): Show | a0003c0003t0001a0003c0005t0001a0003c0013t0001others(6): Show | a0003c0003t0001g0008a0003c0003t0001g0024a0003c0003t0001g0158others(17): Show | 36 | 438 | 0.0822 | -1 | c.357 others(4): Show |
p.Tyr others(5): Show |
PSG8 | ENSG00000124467.20 | transcript | ENST00000306511.5 | protein_coding | 2/5 | 454/1440 | 357/1281 | 119/426 | chr19 | TogoVar | ||
PTPN23_chr3_47376021_47418435 | 47410831 | A | AC | frameshift_variant | HIGH | HG00140.hp2 HG00597.hp1 HG00738.hp2 others(33): Show |
a0005a0006 | a0005c0007a0005c0010a0005c0029others(7): Show | a0005c0007t0001a0005c0010t0001a0005c0029t0001others(7): Show | a0005c0007t0001g0001a0005c0007t0001g0008a0005c0007t0001g0016others(31): Show | 36 | 332 | 0.1084 | 1 | c.304 others(5): Show |
p.Leu others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3117/5237 | 3041/4911 | 1014/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PTPN23_chr3_47376021_47418435 | 47411089 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00558.hp2 others(132): Show |
a0002a0004a0005others(6): Show | a0002c0003a0002c0008a0002c0009others(19): Show | a0002c0003t0001a0002c0008t0001a0002c0008t0002others(20): Show | a0002c0003t0001g0001a0002c0003t0001g0002a0002c0003t0001g0012others(118): Show | 135 | 332 | 0.4066 | 1 | c.329 others(5): Show |
p.Arg others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3373/5237 | 3297/4911 | 1099/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
PZP_chr12_9143840_9213395 | 9196687 | T | A | splice_acceptor_variant others(1): Show |
HIGH | HG01496.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0091 | 1 | 334 | 0.0030 | 0 | c.868 others(5): Show |
PZP | ENSG00000126838.10 | transcript | ENST00000261336.7 | protein_coding | 8/35 | chr12 | TogoVar | ||||||
RECQL5_chr17_75621854_75672154 | 75630838 | C | CTG | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(144): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0001c0021others(6): Show | a0001c0001t0001a0001c0001t0010a0001c0002t0001others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0011others(111): Show | 147 | 378 | 0.3889 | 2 | c.158 others(15): Show |
RECQL5 | ENSG00000108469.15 | transcript | ENST00000317905.10 | protein_coding | 11/19 | chr17 | TogoVar | ||||||
RFPL1_chr22_29433583_29447455 | 29441895 | C | T | stop_gained | HIGH | HG00642.hp2 HG01074.hp1 HG01192.hp2 others(32): Show |
a0003a0005a0011 | a0003c0003a0005c0009a0011c0012 | a0003c0003t0003a0005c0009t0003a0011c0012t0003 | a0003c0003t0003g0005a0003c0003t0003g0008a0003c0003t0003g0014others(4): Show | 35 | 444 | 0.0788 | 0 | c.727 others(3): Show |
p.Gln others(4): Show |
RFPL1 | ENSG00000128250.5 | transcript | ENST00000354373.2 | protein_coding | 2/2 | 936/1496 | 727/954 | 243/317 | chr22 | TogoVar | ||
RHBG_chr1_156364211_156390219 | 156384556 | T | TC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(229): Show |
a0002a0003a0005others(9): Show | a0002c0002a0002c0008a0003c0004others(16): Show | a0002c0002t0001a0002c0008t0001a0003c0004t0001others(16): Show | a0002c0002t0001g0003a0002c0002t0001g0011a0002c0002t0001g0014others(130): Show | 232 | 438 | 0.5297 | 1 | c.127 others(5): Show |
p.Asp others(5): Show |
RHBG | ENSG00000132677.13 | transcript | ENST00000537040.6 | protein_coding | 9/10 | 1311/1790 | 1272/1377 | 424/458 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
RPL29_chr3_51988522_52000895 | 51993865 | T | TGGCC | frameshift_variant | HIGH | HG01496.hp2 HG02015.hp1 NA18969.hp2 others(3): Show |
a0000 | a0000c0005 | a0000c0005t0001 | a0000c0005t0001g0007 | 6 | 321 | 0.0187 | 4 | c.363 others(11): Show |
p.Lys others(5): Show |
RPL29 | ENSG00000162244.12 | transcript | ENST00000294189.11 | protein_coding | 4/4 | 410/754 | 363/480 | 121/159 | chr3 | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAA | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00639.hp2 others(99): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0012a0003c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(97): Show | 102 | 386 | 0.2643 | 2 | c.100 others(15): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SCAPER_chr15_76342904_76910340 | 76883817 | T | C | start_lost | HIGH | HG00140.hp2 HG00544.hp2 HG00597.hp1 others(114): Show |
a0002a0003a0005others(4): Show | a0002c0002a0002c0022a0003c0003others(5): Show | a0002c0002t0002a0002c0022t0002a0003c0003t0002others(9): Show | a0002c0002t0002g0190a0002c0002t0002g0194a0002c0002t0002g0219others(114): Show | 117 | 312 | 0.3750 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 2/32 | 102/5033 | 1/4203 | 1/1400 | chr15 | TogoVar | ||
SCRN3_chr2_174390730_174434575 | 174427852 | TTCAAATT others(6): Show |
T | frameshift_variant | HIGH | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(85): Show |
a0000 | a0000c0002a0000c0004a0000c0008 | a0000c0002t0002a0000c0002t0004a0000c0002t0012others(2): Show | a0000c0002t0002g0002a0000c0002t0002g0009a0000c0002t0002g0010others(47): Show | 88 | 364 | 0.2418 | -13 | c.125 others(22): Show |
p.Asn others(5): Show |
SCRN3 | ENSG00000144306.15 | transcript | ENST00000272732.11 | protein_coding | 8/8 | 1348/3052 | 1251/1275 | 417/424 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SERPINB11_chr18_63697960_63728893 | 63712604 | G | T | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(201): Show |
a0001a0004a0013 | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0005t0002a0001c0005t0005others(18): Show | a0001c0002t0001g0001a0001c0002t0001g0010a0001c0002t0001g0014others(79): Show | 204 | 422 | 0.4834 | 0 | c.268 others(3): Show |
p.Glu others(3): Show |
SERPINB11 | ENSG00000206072.13 | transcript | ENST00000544088.6 | protein_coding | 4/8 | 330/1735 | 268/1179 | 90/392 | chr18 | TogoVar | ||
SETBP1_chr18_44675888_45073510 | 45063530 | A | AC | frameshift_variant | HIGH | HG01496.hp2 HG01978.hp2 HG02004.hp2 others(5): Show |
a0005a0006a0007 | a0005c0006a0006c0007a0007c0008 | a0005c0006t0001a0005c0006t0003a0005c0006t0022others(3): Show | a0005c0006t0001g0007a0005c0006t0001g0075a0005c0006t0003g0022others(5): Show | 8 | 140 | 0.0571 | 1 | c.462 others(5): Show |
p.Leu others(6): Show |
SETBP1 | ENSG00000152217.20 | transcript | ENST00000649279.2 | protein_coding | 6/6 | 4935/9909 | 4629/4791 | 1543/1596 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |
SHISA7_chr19_55423740_55448300 | 55433477 | C | CG | frameshift_variant | HIGH | HG01175.hp1 HG01175.hp2 HG01261.hp1 others(7): Show |
a0000 | a0000c0002 | a0000c0002t0001a0000c0002t0002a0000c0002t0007others(1): Show | a0000c0002t0001g0064a0000c0002t0001g0070a0000c0002t0001g0089others(7): Show | 10 | 372 | 0.0269 | 1 | c.129 others(5): Show |
p.Arg others(5): Show |
SHISA7 | ENSG00000187902.13 | transcript | ENST00000376325.10 | protein_coding | 4/4 | 1732/6470 | 1295/1617 | 432/538 | chr19 | TogoVar | ||
SIGLEC11_chr19_49943985_49966172 | 49960562 | TAGAA | T | frameshift_variant | HIGH | HG00642.hp1 HG00733.hp1 HG00735.hp2 others(62): Show |
a0004a0007a0012others(3): Show | a0004c0004a0004c0008a0004c0015others(16): Show | a0004c0004t0001a0004c0004t0002a0004c0004t0005others(18): Show | a0004c0004t0001g0008a0004c0004t0001g0013a0004c0004t0001g0014others(33): Show | 65 | 452 | 0.1438 | -4 | c.446 others(11): Show |
p.Phe others(5): Show |
SIGLEC11 | ENSG00000161640.15 | transcript | ENST00000447370.6 | protein_coding | 2/11 | 540/3173 | 446/2097 | 149/698 | chr19 | TogoVar | ||
SIGLEC12_chr19_51486227_51506800 | 51501537 | G | GC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(226): Show |
a0001a0003a0005others(3): Show | a0001c0002a0001c0003a0001c0010others(23): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0005others(27): Show | a0001c0002t0001g0001a0001c0002t0001g0004a0001c0002t0001g0012others(92): Show | 229 | 432 | 0.5301 | 1 | c.196 others(4): Show |
p.Ala others(4): Show |
SIGLEC12 | ENSG00000254521.7 | transcript | ENST00000291707.8 | protein_coding | 1/8 | 263/2269 | 196/1788 | 66/595 | chr19 | TogoVar | ||
SIGLEC12_chr19_51486227_51506800 | 51501649 | G | A | stop_gained | HIGH | HG00642.hp1 HG00733.hp2 HG00738.hp1 others(50): Show |
a0003 | a0003c0006a0003c0007a0003c0009others(12): Show | a0003c0006t0001a0003c0006t0004a0003c0007t0002others(15): Show | a0003c0006t0001g0153a0003c0006t0001g0156a0003c0006t0001g0157others(29): Show | 53 | 432 | 0.1227 | 0 | c.85C others(2): Show |
p.Gln others(3): Show |
SIGLEC12 | ENSG00000254521.7 | transcript | ENST00000291707.8 | protein_coding | 1/8 | 152/2269 | 85/1788 | 29/595 | chr19 | TogoVar | ||
SLC11A1_chr2_218377273_218401894 | 218391401 | G | GC | frameshift_variant | HIGH | HG01192.hp1 HG01496.hp1 HG01978.hp1 others(8): Show |
a0003 | a0003c0009a0003c0013a0003c0015others(1): Show | a0003c0009t0001a0003c0013t0004a0003c0013t0007others(2): Show | a0003c0009t0001g0001a0003c0009t0001g0012a0003c0009t0001g0135others(5): Show | 11 | 376 | 0.0293 | 1 | c.107 others(5): Show |
p.Ala others(5): Show |
SLC11A1 | ENSG00000018280.17 | transcript | ENST00000233202.11 | protein_coding | 11/15 | 1171/3608 | 1075/1653 | 359/550 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |