regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SETDB2_chr13_49439274_49500003 | 49490897 | TTCTTCAC others(13): Show |
T | frameshift_variant others(3): Show |
HIGH | NA18940.hp2 | a0009 | a0009c0011 | a0009c0011t0039 | a0009c0011t0039g0048 | 1 | 406 | 0.0025 | -20 | c.199 others(31): Show |
p.Phe others(5): Show |
SETDB2 | ENSG00000136169.17 | transcript | ENST00000611815.2 | protein_coding | 13/14 | 2919/6203 | 1994/2124 | 665/707 | chr13 | TogoVar | ||
SETSIP_chr1_92069533_92080411 | 92075125 | A | AC | frameshift_variant | HIGH | HG00438.hp2 HG00621.hp2 HG00673.hp1 others(14): Show |
a0002 | a0002c0002a0002c0004 | a0002c0002t0000a0002c0004t0000 | a0002c0002t0000g0000a0002c0004t0000g0000 | 17 | 363 | 0.0468 | 1 | c.286 others(4): Show |
p.Val others(4): Show |
SETSIP | ENSG00000230667.7 | transcript | ENST00000596516.3 | protein_coding | 1/1 | 286/879 | 286/879 | 96/292 | chr1 | TogoVar | ||
SHROOM4_chrX_50581796_50819194 | 50695805 | GA | G | frameshift_variant | HIGH | NA18940.hp1 | a0020 | a0020c0027 | a0020c0027t0001 | a0020c0027t0001g0175 | 1 | 175 | 0.0057 | -1 | c.249 others(4): Show |
p.Leu others(4): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 2/9 | 425/14557 | 249/4482 | 83/1493 | chrX | TogoVar | ||
SHROOM4_chrX_50581796_50819194 | 50695834 | AG | A | frameshift_variant | HIGH | NA18940.hp1 | a0020 | a0020c0027 | a0020c0027t0001 | a0020c0027t0001g0175 | 1 | 175 | 0.0057 | -1 | c.220 others(4): Show |
p.Leu others(4): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 2/9 | 396/14557 | 220/4482 | 74/1493 | chrX | TogoVar | ||
SHROOM4_chrX_50581796_50819194 | 50813963 | G | GC | frameshift_variant | HIGH | NA18940.hp1 | a0020 | a0020c0027 | a0020c0027t0001 | a0020c0027t0001g0175 | 1 | 175 | 0.0057 | 1 | c.55d others(3): Show |
p.Ala others(4): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/9 | 231/14557 | 55/4482 | 19/1493 | chrX | TogoVar | ||
SHTN1_chr10_116876477_117010187 | 116940527 | A | T | stop_gained | HIGH | NA18940.hp1 | a0002 | a0002c0004 | a0002c0004t0005 | a0002c0004t0005g0286 | 1 | 292 | 0.0034 | 0 | c.797 others(3): Show |
p.Leu others(4): Show |
SHTN1 | ENSG00000187164.20 | transcript | ENST00000355371.9 | protein_coding | 9/17 | 905/6871 | 797/1896 | 266/631 | chr10 | TogoVar | ||
SIGLEC12_chr19_51486227_51506800 | 51501537 | G | GC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(226): Show |
a0001a0003a0005others(3): Show | a0001c0002a0001c0003a0001c0010others(23): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0005others(27): Show | a0001c0002t0001g0001a0001c0002t0001g0004a0001c0002t0001g0012others(92): Show | 229 | 432 | 0.5301 | 1 | c.196 others(4): Show |
p.Ala others(4): Show |
SIGLEC12 | ENSG00000254521.7 | transcript | ENST00000291707.8 | protein_coding | 1/8 | 263/2269 | 196/1788 | 66/595 | chr19 | TogoVar | ||
SIGLEC5_chr19_51605960_51635401 | 51629822 | CCCTGCCA others(5572): Show |
C | exon_loss_variant | HIGH | HG00323.hp2 HG00423.hp2 HG00438.hp2 others(29): Show |
a0005 | a0005c0008a0005c0014a0005c0015others(4): Show | a0005c0008t0003a0005c0014t0003a0005c0014t0009others(8): Show | a0005c0008t0003g0020a0005c0008t0003g0021a0005c0008t0003g0065others(27): Show | 32 | 414 | 0.0773 | -5579 | c.-50 others(12): Show |
SIGLEC5 | ENSG00000268500.7 | transcript | ENST00000683636.1 | protein_coding | 2/9 | chr19 | TogoVar | ||||||
SLAIN1_chr13_77692687_77769229 | 77698132 | T | TGG | frameshift_variant | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(296): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(279): Show | 299 | 300 | 0.9967 | 2 | c.220 others(9): Show |
p.Leu others(4): Show |
SLAIN1 | ENSG00000139737.23 | transcript | ENST00000418532.6 | protein_coding | 1/7 | 449/3009 | 222/1773 | 74/590 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |
SLAIN1_chr13_77692687_77769229 | 77698141 | G | GC | frameshift_variant | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(296): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(279): Show | 299 | 300 | 0.9967 | 1 | c.230 others(4): Show |
p.Leu others(4): Show |
SLAIN1 | ENSG00000139737.23 | transcript | ENST00000418532.6 | protein_coding | 1/7 | 458/3009 | 231/1773 | 77/590 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar | ||
SLC6A18_chr5_1220381_1251189 | 1240642 | C | G | stop_gained | HIGH | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(178): Show |
a0001a0006a0007others(4): Show | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0002t0002a0001c0005t0001others(22): Show | a0001c0002t0001g0004a0001c0002t0001g0018a0001c0002t0001g0019others(157): Show | 181 | 456 | 0.3969 | 0 | c.957 others(3): Show |
p.Tyr others(4): Show |
SLC6A18 | ENSG00000164363.10 | transcript | ENST00000324642.4 | protein_coding | 7/12 | 1054/2095 | 957/1887 | 319/628 | chr5 | TogoVar | ||
SLC7A13_chr8_86209063_86235381 | 86214405 | TCCGACAT others(1): Show |
T | frameshift_variant others(1): Show |
HIGH | HG00438.hp1 HG00544.hp1 HG01070.hp1 others(92): Show |
a0000 | a0000c0002a0000c0015a0000c0024 | a0000c0002t0002a0000c0015t0002a0000c0024t0002 | a0000c0002t0002g0002a0000c0002t0002g0008a0000c0002t0002g0012others(18): Show | 95 | 428 | 0.2220 | -8 | c.141 others(15): Show |
p.Ter others(5): Show |
SLC7A13 | ENSG00000164893.9 | transcript | ENST00000297524.8 | protein_coding | 4/4 | 1524/1867 | 1413/1413 | 471/470 | chr8 | TogoVar | ||
SMPD2_chr6_109435724_109448919 | 109443799 | TCCAGCAT others(13): Show |
T | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0009 | a0006c0009t0002 | a0006c0009t0002g0005 | 1 | 438 | 0.0023 | -20 | c.116 others(29): Show |
p.Gln others(5): Show |
SMPD2 | ENSG00000135587.9 | transcript | ENST00000258052.8 | protein_coding | 10/10 | 1566/1684 | 1168/1272 | 390/423 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
SNX27_chr1_151607050_151704080 | 151692406 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(82): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(48): Show | a0001c0001t0001g0113a0001c0001t0001g0117a0001c0001t0001g0118others(82): Show | 85 | 366 | 0.2322 | 1 | c.124 others(7): Show |
SNX27 | ENSG00000143376.14 | transcript | ENST00000458013.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SNX27_chr1_151607050_151704080 | 151692406 | C | CTT | splice_acceptor_variant others(1): Show |
HIGH | HG00323.hp1 HG00438.hp1 HG00438.hp2 others(67): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(38): Show | a0001c0001t0001g0136a0001c0001t0003g0099a0001c0001t0003g0141others(65): Show | 70 | 366 | 0.1913 | 2 | c.124 others(15): Show |
SNX27 | ENSG00000143376.14 | transcript | ENST00000458013.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SPATA21_chr1_16393643_16442424 | 16398776 | G | A | stop_gained | HIGH | NA18940.hp2 NA18945.hp1 NA18961.hp2 others(6): Show |
a0006 | a0006c0006 | a0006c0006t0001a0006c0006t0002 | a0006c0006t0001g0120a0006c0006t0002g0276a0006c0006t0002g0277others(6): Show | 9 | 352 | 0.0256 | 0 | c.139 others(4): Show |
p.Arg others(4): Show |
SPATA21 | ENSG00000187144.11 | transcript | ENST00000335496.5 | protein_coding | 13/13 | 1882/2015 | 1399/1410 | 467/469 | chr1 | TogoVar | ||
SPATA31C2_chr9_88124305_88143475 | 88135258 | ATTGGAGT others(3483): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00099.hp2 HG01070.hp1 HG01123.hp2 others(8): Show |
a0005 | a0005c0006 | a0005c0006t0003 | a0005c0006t0003g0069a0005c0006t0003g0070a0005c0006t0003g0071others(5): Show | 11 | 446 | 0.0247 | -3490 | c.-30 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | ||||||
SPDYE21_chr7_67271941_67294005 | 67281505 | T | TGGGTGGC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00558.hp1 others(128): Show |
a0002a0009a0012others(2): Show | a0002c0002a0002c0010a0009c0011others(3): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0017others(6): Show | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0002t0001g0004others(50): Show | 131 | 460 | 0.2848 | 7 | c.514 others(14): Show |
p.Glu others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 4/9 | 1065/3286 | 521/1209 | 174/402 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
SRSF3_chr6_36589362_36610600 | 36601940 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00438.hp2 HG00544.hp2 others(95): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0021a0001c0001t0001g0045a0001c0001t0001g0051others(85): Show | 98 | 382 | 0.2565 | 1 | c.468 others(6): Show |
SRSF3 | ENSG00000112081.17 | transcript | ENST00000373715.11 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SRSF3_chr6_36589362_36610600 | 36601940 | C | CTT | splice_acceptor_variant others(1): Show |
HIGH | HG01074.hp1 HG01516.hp1 HG02647.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0013a0001c0001t0024others(2): Show | a0001c0001t0002g0137a0001c0001t0002g0187a0001c0001t0002g0195others(5): Show | 8 | 382 | 0.0209 | 2 | c.468 others(13): Show |
SRSF3 | ENSG00000112081.17 | transcript | ENST00000373715.11 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
STAU1_chr20_49108339_49193334 | 49166286 | C | A | splice_acceptor_variant others(1): Show |
HIGH | NA18940.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0124 | 1 | 366 | 0.0027 | 0 | c.-84 others(5): Show |
STAU1 | ENSG00000124214.21 | transcript | ENST00000371856.7 | protein_coding | 2/13 | chr20 | TogoVar | ||||||
STRC_chr15_43594563_43623800 | 43614194 | ACCTGCAG others(5): Show |
A | frameshift_variant others(3): Show |
HIGH | HG02071.hp2 HG02148.hp2 HG02155.hp2 others(14): Show |
a0004 | a0004c0003 | a0004c0003t0001 | a0004c0003t0001g0003a0004c0003t0001g0027a0004c0003t0001g0095others(3): Show | 17 | 374 | 0.0455 | -12 | c.230 others(23): Show |
p.Lys others(5): Show |
STRC | ENSG00000242866.10 | transcript | ENST00000450892.7 | protein_coding | 6/29 | 2303/5328 | 768/1775 | chr15 | TogoVar | |||
TAF11L10_chr5_17592232_17602828 | 17597711 | TGGGTGCT others(724): Show |
T | start_lost others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00408.hp2 others(147): Show |
a0002a0011 | a0002c0002a0002c0006a0011c0007 | a0002c0002t0000a0002c0006t0000a0011c0007t0000 | a0002c0002t0000g0000a0002c0006t0000g0000a0011c0007t0000g0000 | 150 | 352 | 0.4261 | -731 | c.-61 others(8): Show |
p.Met others(10): Show |
TAF11L10 | ENSG00000284356.1 | transcript | ENST00000638842.1 | protein_coding | 1/1 | 117/597 | 1/597 | 1/198 | chr5 | TogoVar | ||
TAS2R46_chr12_11056365_11067294 | 11061546 | C | T | stop_gained | HIGH | HG00140.hp2 HG00544.hp2 HG00558.hp2 others(64): Show |
a0002a0007a0010 | a0002c0002a0007c0010a0010c0009 | a0002c0002t0000a0007c0010t0000a0010c0009t0000 | a0002c0002t0000g0000a0007c0010t0000g0000a0010c0009t0000g0000 | 67 | 295 | 0.2271 | 0 | c.749 others(3): Show |
p.Trp others(4): Show |
TAS2R46 | ENSG00000226761.3 | transcript | ENST00000533467.1 | protein_coding | 1/1 | 749/930 | 749/930 | 250/309 | chr12 | TogoVar | ||
TBCD_chr17_82747065_82950914 | 82797739 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(115): Show |
a0001a0002a0006others(9): Show | a0001c0001a0001c0002a0001c0014others(17): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0026others(31): Show | a0001c0001t0002g0223a0001c0001t0002g0271a0001c0001t0002g0301others(115): Show | 118 | 318 | 0.3711 | 1 | c.772 others(6): Show |
TBCD | ENSG00000141556.22 | transcript | ENST00000355528.9 | protein_coding | 7/38 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TBL1X_chrX_9460058_9724740 | 9692202 | A | AG | frameshift_variant | HIGH | NA18940.hp1 | a0003 | a0003c0006 | a0003c0006t0001 | a0003c0006t0001g0026 | 1 | 199 | 0.0050 | 1 | c.845 others(4): Show |
p.His others(5): Show |
TBL1X | ENSG00000101849.18 | transcript | ENST00000645353.2 | protein_coding | 9/18 | 1436/5818 | 846/1734 | 282/577 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TFE3_chrX_49023726_49048357 | 49038270 | G | GT | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0008 | a0006c0008t0001 | a0006c0008t0001g0028 | 1 | 260 | 0.0039 | 1 | c.706 others(4): Show |
p.Thr others(5): Show |
TFE3 | ENSG00000068323.17 | transcript | ENST00000315869.8 | protein_coding | 4/10 | 837/3291 | 706/1728 | 236/575 | chrX | TogoVar | ||
TFE3_chrX_49023726_49048357 | 49038320 | C | CG | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0008 | a0006c0008t0001 | a0006c0008t0001g0028 | 1 | 260 | 0.0039 | 1 | c.656 others(4): Show |
p.Pro others(5): Show |
TFE3 | ENSG00000068323.17 | transcript | ENST00000315869.8 | protein_coding | 4/10 | 787/3291 | 656/1728 | 219/575 | chrX | TogoVar | ||
TFE3_chrX_49023726_49048357 | 49038412 | A | AGC | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0008 | a0006c0008t0001 | a0006c0008t0001g0028 | 1 | 260 | 0.0039 | 2 | c.563 others(9): Show |
p.Tyr others(5): Show |
TFE3 | ENSG00000068323.17 | transcript | ENST00000315869.8 | protein_coding | 4/10 | 695/3291 | 564/1728 | 188/575 | chrX | TogoVar | ||
TFE3_chrX_49023726_49048357 | 49038422 | G | GT | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0008 | a0006c0008t0001 | a0006c0008t0001g0028 | 1 | 260 | 0.0039 | 1 | c.554 others(4): Show |
p.Asn others(5): Show |
TFE3 | ENSG00000068323.17 | transcript | ENST00000315869.8 | protein_coding | 4/10 | 685/3291 | 554/1728 | 185/575 | chrX | TogoVar | ||
TIMP1_chrX_47577436_47591789 | 47585259 | A | AC | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0006 | a0006c0006t0001 | a0006c0006t0001g0021 | 1 | 327 | 0.0031 | 1 | c.261 others(4): Show |
p.Ala others(4): Show |
TIMP1 | ENSG00000102265.12 | transcript | ENST00000218388.9 | protein_coding | 4/6 | 309/769 | 262/624 | 88/207 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TIMP1_chrX_47577436_47591789 | 47585316 | G | T | stop_gained | HIGH | NA18940.hp1 | a0006 | a0006c0006 | a0006c0006t0001 | a0006c0006t0001g0021 | 1 | 327 | 0.0031 | 0 | c.313 others(3): Show |
p.Glu others(4): Show |
TIMP1 | ENSG00000102265.12 | transcript | ENST00000218388.9 | protein_coding | 4/6 | 360/769 | 313/624 | 105/207 | chrX | TogoVar | ||
TIMP1_chrX_47577436_47591789 | 47585325 | AT | A | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0006 | a0006c0006t0001 | a0006c0006t0001g0021 | 1 | 327 | 0.0031 | -1 | c.324 others(4): Show |
p.Ile others(5): Show |
TIMP1 | ENSG00000102265.12 | transcript | ENST00000218388.9 | protein_coding | 4/6 | 371/769 | 324/624 | 108/207 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TIMP1_chrX_47577436_47591789 | 47585565 | G | GC | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0006 | a0006c0006t0001 | a0006c0006t0001g0021 | 1 | 327 | 0.0031 | 1 | c.352 others(4): Show |
p.His others(5): Show |
TIMP1 | ENSG00000102265.12 | transcript | ENST00000218388.9 | protein_coding | 5/6 | 400/769 | 353/624 | 118/207 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TIMP1_chrX_47577436_47591789 | 47585596 | TG | T | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0006 | a0006c0006t0001 | a0006c0006t0001g0021 | 1 | 327 | 0.0031 | -1 | c.384 others(4): Show |
p.Trp others(5): Show |
TIMP1 | ENSG00000102265.12 | transcript | ENST00000218388.9 | protein_coding | 5/6 | 431/769 | 384/624 | 128/207 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TMPRSS3_chr21_42366890_42401052 | 42383199 | C | CTA | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(99): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0003a0002c0007others(6): Show | a0001c0001t0001a0002c0003t0001a0002c0003t0002others(16): Show | a0001c0001t0001g0251a0002c0003t0001g0007a0002c0003t0001g0011others(80): Show | 102 | 472 | 0.2161 | 2 | c.617 others(13): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 7/12 | chr21 | TogoVar | ||||||
TNK2_chr3_195858364_195913551 | 195868357 | C | CG | frameshift_variant | HIGH | HG00597.hp1 HG00621.hp1 HG00639.hp1 others(50): Show |
a0002a0013a0016others(3): Show | a0002c0004a0002c0008a0002c0010others(20): Show | a0002c0004t0001a0002c0004t0002a0002c0008t0001others(24): Show | a0002c0004t0001g0131a0002c0004t0001g0256a0002c0004t0001g0279others(50): Show | 53 | 372 | 0.1425 | 1 | c.194 others(5): Show |
p.Pro others(5): Show |
TNK2 | ENSG00000061938.21 | transcript | ENST00000672887.2 | protein_coding | 13/16 | 2025/4070 | 1940/3168 | 647/1055 | chr3 | TogoVar | ||
TNRC18_chr7_5301811_5428834 | 5388813 | C | CG | frameshift_variant | HIGH | HG00544.hp1 HG00544.hp2 HG01109.hp1 others(19): Show |
a0003a0034a0036others(1): Show | a0003c0017a0003c0041a0003c0044others(18): Show | a0003c0017t0002a0003c0017t0007a0003c0041t0007others(19): Show | a0003c0017t0002g0020a0003c0017t0007g0129a0003c0041t0007g0164others(19): Show | 22 | 306 | 0.0719 | 1 | c.101 others(5): Show |
p.Pro others(5): Show |
TNRC18 | ENSG00000182095.15 | transcript | ENST00000430969.6 | protein_coding | 5/30 | 1647/10839 | 1010/8907 | 337/2968 | chr7 | TogoVar | ||
TRIM38_chr6_25957802_25996231 | 25969403 | C | T | stop_gained | HIGH | NA18940.hp2 NA18941.hp2 NA18948.hp1 others(11): Show |
a0002 | a0002c0003 | a0002c0003t0016a0002c0003t0029a0002c0003t0041others(5): Show | a0002c0003t0016g0009a0002c0003t0016g0033a0002c0003t0016g0055others(9): Show | 14 | 366 | 0.0383 | 0 | c.490 others(3): Show |
p.Arg others(4): Show |
TRIM38 | ENSG00000112343.11 | transcript | ENST00000357085.5 | protein_coding | 4/8 | 966/9418 | 490/1398 | 164/465 | chr6 | TogoVar | ||
TRIM51G_chr11_48970498_48988885 | 48978871 | C | G | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(271): Show |
a0001a0003a0005others(5): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0006t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(74): Show | 274 | 424 | 0.6462 | 0 | c.738 others(5): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/6 | chr11 | TogoVar | ||||||
TSPYL2_chrX_53077367_53093540 | 53082569 | A | AC | frameshift_variant | HIGH | NA18940.hp1 | a0007 | a0007c0007 | a0007c0007t0015 | a0007c0007t0015g0023 | 1 | 258 | 0.0039 | 1 | c.74d others(3): Show |
p.Pro others(4): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 1/7 | 207/2815 | 75/2082 | 25/693 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TSPYL2_chrX_53077367_53093540 | 53082591 | G | GC | frameshift_variant | HIGH | NA18940.hp1 | a0007 | a0007c0007 | a0007c0007t0015 | a0007c0007t0015g0023 | 1 | 258 | 0.0039 | 1 | c.95d others(3): Show |
p.Pro others(4): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 1/7 | 228/2815 | 96/2082 | 32/693 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TSPYL2_chrX_53077367_53093540 | 53082698 | G | GC | frameshift_variant | HIGH | NA18940.hp1 | a0007 | a0007c0007 | a0007c0007t0015 | a0007c0007t0015g0023 | 1 | 258 | 0.0039 | 1 | c.204 others(4): Show |
p.Ala others(4): Show |
TSPYL2 | ENSG00000184205.14 | transcript | ENST00000375442.8 | protein_coding | 1/7 | 337/2815 | 205/2082 | 69/693 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TUBA3E_chr2_130186745_130203439 | 130197356 | ACACACCT others(2467): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(174): Show |
a0001 | a0001c0002a0001c0005a0001c0011others(14): Show | a0001c0002t0002a0001c0005t0002a0001c0011t0002others(14): Show | a0001c0002t0002g0002a0001c0002t0002g0003a0001c0002t0002g0006others(31): Show | 177 | 428 | 0.4136 | -2474 | c.-14 others(11): Show |
TUBA3E | ENSG00000152086.9 | transcript | ENST00000312988.9 | protein_coding | 1/5 | chr2 | TogoVar | ||||||
UPK1A_chr19_35661517_35683481 | 35673231 | G | C | splice_acceptor_variant others(1): Show |
HIGH | NA18940.hp1 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0173 | 1 | 420 | 0.0024 | 0 | c.286 others(5): Show |
UPK1A | ENSG00000105668.8 | transcript | ENST00000222275.3 | protein_coding | 3/7 | chr19 | TogoVar | ||||||
USP17L26_chr4_9329658_9341250 | 9336063 | C | A | stop_gained | HIGH | NA18940.hp2 | a0017 | a0017c0025 | a0017c0025t0000 | a0017c0025t0000g0000 | 1 | 102 | 0.0098 | 0 | c.140 others(4): Show |
p.Ser others(4): Show |
USP17L26 | ENSG00000229579.5 | transcript | ENST00000509660.1 | protein_coding | 1/1 | 1406/1593 | 1406/1593 | 469/530 | chr4 | TogoVar | ||
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
VDR_chr12_47836537_47909994 | 47879112 | A | G | start_lost | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(236): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0006others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(67): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0016others(234): Show | 239 | 358 | 0.6676 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
VDR | ENSG00000111424.12 | transcript | ENST00000549336.6 | protein_coding | 3/10 | 125/4616 | 2/1284 | 1/427 | chr12 | TogoVar |