regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
OR4X2_chr11_48240104_48251015 | 48245184 | C | G | stop_gained | HIGH | HG00280.hp2 HG00408.hp2 HG00423.hp1 others(76): Show |
a0002a0006 | a0002c0002a0006c0009 | a0002c0002t0000a0006c0009t0000 | a0002c0002t0000g0000a0006c0009t0000g0000 | 79 | 438 | 0.1804 | 0 | c.81C others(2): Show |
p.Tyr others(3): Show |
OR4X2 | ENSG00000172208.7 | transcript | ENST00000624868.2 | protein_coding | 1/1 | 81/912 | 81/912 | 27/303 | chr11 | TogoVar | ||
OR51A4_chr11_4937831_4952605 | 4946925 | TCATGCAA others(5673): Show |
T | exon_loss_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(135): Show |
a0002a0010a0017 | a0002c0002a0010c0008a0017c0017 | a0002c0002t0001a0002c0002t0008a0002c0002t0022others(8): Show | a0002c0002t0001g0001a0002c0002t0008g0009a0002c0002t0022g0017others(8): Show | 138 | 446 | 0.3094 | -5680 | c.-51 others(9): Show |
OR51A4 | ENSG00000205497.5 | transcript | ENST00000641898.1 | protein_coding | 1/2 | 298/4393 | chr11 | TogoVar | |||||
OR51I2_chr11_5444323_5461518 | 5454201 | T | TCA | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(53): Show |
a0003 | a0003c0003 | a0003c0003t0003a0003c0003t0025a0003c0003t0027others(2): Show | a0003c0003t0003g0001a0003c0003t0003g0024a0003c0003t0003g0038others(14): Show | 56 | 482 | 0.1162 | 2 | c.714 others(9): Show |
p.Asn others(5): Show |
OR51I2 | ENSG00000187918.6 | transcript | ENST00000641930.1 | protein_coding | 2/2 | 988/3302 | 716/939 | 239/312 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR51Q1_chr11_5417111_5428206 | 5422906 | C | T | stop_gained | HIGH | HG00280.hp2 HG00323.hp1 HG00323.hp2 others(212): Show |
a0002a0003a0006 | a0002c0002a0003c0003a0006c0007 | a0002c0002t0001a0002c0002t0003a0003c0003t0001others(1): Show | a0002c0002t0001g0000a0002c0002t0003g0000a0003c0003t0001g0000others(1): Show | 215 | 454 | 0.4736 | 0 | c.706 others(3): Show |
p.Arg others(4): Show |
OR51Q1 | ENSG00000167360.6 | transcript | ENST00000300778.4 | protein_coding | 1/1 | 796/1096 | 706/954 | 236/317 | chr11 | TogoVar | ||
OR52B4_chr11_4362263_4373386 | 4368174 | AG | A | frameshift_variant | HIGH | HG00099.hp2 HG00323.hp1 HG00408.hp2 others(171): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0004 | a0002c0002t0001g0000a0002c0002t0004g0000 | 174 | 466 | 0.3734 | -1 | c.121 others(4): Show |
p.Leu others(4): Show |
OR52B4 | ENSG00000221996.6 | transcript | ENST00000624801.3 | protein_coding | 1/1 | 212/1124 | 121/945 | 41/314 | chr11 | TogoVar | ||
OR52D1_chr11_5483685_5494749 | 5489310 | G | GGGCT | frameshift_variant | HIGH | HG00099.hp2 HG00280.hp1 HG00323.hp2 others(45): Show |
a0004a0012 | a0004c0006a0004c0017a0004c0018others(1): Show | a0004c0006t0001a0004c0017t0001a0004c0018t0001others(1): Show | a0004c0006t0001g0000a0004c0017t0001g0000a0004c0018t0001g0000others(1): Show | 48 | 470 | 0.1021 | 4 | c.605 others(11): Show |
p.Thr others(5): Show |
OR52D1 | ENSG00000181609.5 | transcript | ENST00000322641.5 | protein_coding | 1/1 | 631/1065 | 609/957 | 203/318 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR52M1_chr11_4540191_4551144 | 4545229 | CT | C | frameshift_variant | HIGH | HG00621.hp2 HG00639.hp1 HG01891.hp1 others(8): Show |
a0003 | a0003c0005a0003c0011 | a0003c0005t0000a0003c0011t0000 | a0003c0005t0000g0000a0003c0011t0000g0000 | 11 | 430 | 0.0256 | -1 | c.41d others(3): Show |
p.Phe others(4): Show |
OR52M1 | ENSG00000197790.1 | transcript | ENST00000360213.1 | protein_coding | 1/1 | 41/954 | 41/954 | 14/317 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
OR5AR1_chr11_56658686_56669618 | 56663740 | C | T | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(300): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0000a0001c0003t0000a0001c0005t0000others(2): Show | a0001c0001t0000g0000a0001c0003t0000g0000a0001c0005t0000g0000others(2): Show | 303 | 432 | 0.7014 | 0 | c.55C others(2): Show |
p.Gln others(3): Show |
OR5AR1 | ENSG00000172459.5 | transcript | ENST00000624596.2 | protein_coding | 1/1 | 55/933 | 55/933 | 19/310 | chr11 | TogoVar | ||
OR6C1_chr12_55309343_55327364 | 55320622 | C | CA | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(169): Show |
a0002 | a0002c0002a0002c0005a0002c0007others(2): Show | a0002c0002t0001a0002c0005t0002a0002c0005t0004others(3): Show | a0002c0002t0001g0001a0002c0002t0001g0002a0002c0002t0001g0003others(50): Show | 172 | 474 | 0.3629 | 1 | c.24d others(3): Show |
p.Glu others(3): Show |
OR6C1 | ENSG00000205330.4 | transcript | ENST00000642104.1 | protein_coding | 2/2 | 315/2055 | 25/939 | 9/312 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
OR8K1_chr11_56341039_56351998 | 56346040 | T | C | start_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(348): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(8): Show | a0001c0001t0000a0001c0002t0000a0001c0004t0000others(8): Show | a0001c0001t0000g0000a0001c0002t0000g0000a0001c0004t0000g0000others(8): Show | 351 | 437 | 0.8032 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
OR8K1 | ENSG00000150261.5 | transcript | ENST00000279783.5 | protein_coding | 1/1 | 2/960 | 2/960 | 1/319 | chr11 | TogoVar | ||
PATE4_chr11_125828316_125845072 | 125837866 | A | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(193): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0001c0001t0012a0001c0001t0016others(2): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(21): Show | 196 | 424 | 0.4623 | 0 | c.59- others(4): Show |
PATE4 | ENSG00000237353.7 | transcript | ENST00000457514.3 | protein_coding | 1/2 | chr11 | TogoVar | ||||||
PBOV1_chr6_138210986_138223491 | 138218046 | A | AG | frameshift_variant | HIGH | HG00140.hp2 HG00408.hp1 HG00558.hp2 others(87): Show |
a0000 | a0000c0002a0000c0004 | a0000c0002t0002a0000c0002t0005a0000c0002t0009others(3): Show | a0000c0002t0002g0000a0000c0002t0005g0000a0000c0002t0009g0000others(3): Show | 90 | 384 | 0.2344 | 1 | c.349 others(4): Show |
p.Leu others(5): Show |
PBOV1 | ENSG00000254440.3 | transcript | ENST00000527246.3 | protein_coding | 1/1 | 445/2506 | 349/408 | 117/135 | chr6 | TogoVar | ||
PCDHGA8_chr5_141387633_141517975 | 141393331 | GC | G | frameshift_variant | HIGH | HG00438.hp2 HG00609.hp2 HG00621.hp1 others(42): Show |
a0003 | a0003c0003a0003c0012 | a0003c0003t0001a0003c0003t0002a0003c0003t0003others(4): Show | a0003c0003t0001g0162a0003c0003t0001g0256a0003c0003t0001g0270others(42): Show | 45 | 302 | 0.1490 | -1 | c.522 others(4): Show |
p.Asn others(5): Show |
PCDHGA8 | ENSG00000253767.3 | transcript | ENST00000398604.3 | protein_coding | 1/4 | 703/4782 | 522/2799 | 174/932 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |
PKD1L3_chr16_71924538_72005402 | 71967237 | G | A | stop_gained | HIGH | HG00280.hp1 HG00423.hp2 HG00438.hp1 others(84): Show |
a0001a0004a0017others(1): Show | a0001c0001a0001c0028a0001c0062others(14): Show | a0001c0001t0001a0001c0028t0001a0001c0062t0001others(16): Show | a0001c0001t0001g0050a0001c0001t0001g0147a0001c0001t0001g0157others(84): Show | 87 | 308 | 0.2825 | 0 | c.236 others(4): Show |
p.Arg others(4): Show |
PKD1L3 | ENSG00000277481.2 | transcript | ENST00000620267.2 | protein_coding | 15/30 | 2789/5623 | 2365/5199 | 789/1732 | chr16 | TogoVar | ||
PKN1_chr19_14428306_14476859 | 14451928 | G | GC | frameshift_variant | HIGH | HG00597.hp1 HG00597.hp2 HG01109.hp1 others(16): Show |
a0004a0009a0010 | a0004c0008a0004c0012a0004c0024others(7): Show | a0004c0008t0001a0004c0012t0001a0004c0024t0001others(7): Show | a0004c0008t0001g0109a0004c0008t0001g0194a0004c0008t0001g0281others(16): Show | 19 | 376 | 0.0505 | 1 | c.107 others(5): Show |
p.Phe others(5): Show |
PKN1 | ENSG00000123143.13 | transcript | ENST00000242783.11 | protein_coding | 7/22 | 1294/3120 | 1078/2829 | 360/942 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |
PLEKHA2_chr8_38896346_38978912 | 38901439 | C | CG | splice_donor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0008others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(46): Show | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0015others(332): Show | 337 | 376 | 0.8963 | 1 | c.-24 others(6): Show |
PLEKHA2 | ENSG00000169499.15 | transcript | ENST00000617275.5 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
POLRMT_chr19_612221_638537 | 617761 | CAGACTAC others(24): Show |
C | frameshift_variant others(3): Show |
HIGH | NA18965.hp1 | a0036 | a0036c0072 | a0036c0072t0004 | a0036c0072t0004g0156 | 1 | 422 | 0.0024 | -31 | c.348 others(43): Show |
p.Ser others(6): Show |
POLRMT | ENSG00000099821.14 | transcript | ENST00000588649.7 | protein_coding | 18/21 | 3480/3693 | 1160/1230 | chr19 | TogoVar | |||
POTEC_chr18_14502339_14548600 | 14513787 | T | C | splice_acceptor_variant others(1): Show |
HIGH | HG00621.hp1 HG02735.hp1 HG03927.hp1 others(16): Show |
a0003a0012 | a0003c0004a0012c0014 | a0003c0004t0004a0003c0004t0050a0003c0004t0051others(1): Show | a0003c0004t0004g0002a0003c0004t0004g0003a0003c0004t0004g0020others(11): Show | 19 | 388 | 0.0490 | 0 | c.141 others(6): Show |
POTEC | ENSG00000183206.18 | transcript | ENST00000358970.10 | protein_coding | 9/10 | chr18 | TogoVar | ||||||
POU3F3_chr2_104849115_104863574 | 104855606 | C | CG | frameshift_variant | HIGH | HG00597.hp1 HG00621.hp1 HG01981.hp2 others(17): Show |
a0000 | a0000c0003a0000c0004 | a0000c0003t0001a0000c0003t0003a0000c0003t0004others(3): Show | a0000c0003t0001g0000a0000c0003t0003g0000a0000c0003t0004g0000others(3): Show | 20 | 406 | 0.0493 | 1 | c.101 others(4): Show |
p.Gly others(4): Show |
POU3F3 | ENSG00000198914.5 | transcript | ENST00000361360.4 | protein_coding | 1/1 | 1498/4460 | 102/1503 | 34/500 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
PRPF3_chr1_150316533_150358233 | 150324880 | C | CTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00438.hp1 HG00639.hp2 HG00733.hp1 others(49): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007a0001c0001t0001g0014a0001c0001t0001g0022others(48): Show | 52 | 362 | 0.1437 | 3 | c.-48 others(14): Show |
PRPF3 | ENSG00000117360.13 | transcript | ENST00000324862.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PRPF3_chr1_150316533_150358233 | 150324880 | C | CTTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(303): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(297): Show | 306 | 362 | 0.8453 | 4 | c.-48 others(15): Show |
PRPF3 | ENSG00000117360.13 | transcript | ENST00000324862.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PSG1_chr19_42861464_42884713 | 42871766 | C | T | splice_donor_variant others(1): Show |
HIGH | HG00621.hp1 NA18940.hp2 NA18946.hp2 others(6): Show |
a0002a0014 | a0002c0002a0014c0016 | a0002c0002t0002a0014c0016t0002 | a0002c0002t0002g0010a0002c0002t0002g0155a0014c0016t0002g0050 | 9 | 408 | 0.0221 | 0 | c.709 others(5): Show |
PSG1 | ENSG00000231924.10 | transcript | ENST00000436291.7 | protein_coding | 3/5 | chr19 | TogoVar | ||||||
PSG7_chr19_42919132_42942207 | 42935542 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(373): Show |
a0001a0005a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(319): Show | 376 | 416 | 0.9039 | 0 | c.292 others(3): Show |
p.Arg others(3): Show |
PSG7 | ENSG00000221878.13 | transcript | ENST00000406070.7 | protein_coding | 2/6 | 423/2067 | 292/1260 | 98/419 | chr19 | TogoVar | ||
PSORS1C1_chr6_31109800_31145092 | 31138723 | T | TC | frameshift_variant | HIGH | HG00423.hp1 HG00733.hp2 HG00735.hp1 others(54): Show |
a0004a0006 | a0004c0005a0006c0006a0006c0013 | a0004c0005t0001a0004c0005t0003a0004c0005t0005others(4): Show | a0004c0005t0001g0090a0004c0005t0001g0195a0004c0005t0001g0205others(25): Show | 57 | 449 | 0.1270 | 1 | c.118 others(4): Show |
p.His others(4): Show |
PSORS1C1 | ENSG00000204540.11 | transcript | ENST00000259881.10 | protein_coding | 5/6 | 439/939 | 119/459 | 40/152 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
PTEN_chr10_87858625_87976930 | 87960876 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(84): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(27): Show | a0001c0001t0002g0009a0001c0001t0002g0144a0001c0001t0002g0211others(84): Show | 87 | 322 | 0.2702 | 1 | c.802 others(6): Show |
PTEN | ENSG00000171862.15 | transcript | ENST00000371953.8 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
PTPN7_chr1_202142016_202165602 | 202155576 | T | TGTGCCCG others(3): Show |
frameshift_variant | HIGH | NA18965.hp2 | a0005 | a0005c0007 | a0005c0007t0001 | a0005c0007t0001g0343 | 1 | 454 | 0.0022 | 10 | c.415 others(17): Show |
p.Gln others(5): Show |
PTPN7 | ENSG00000143851.16 | transcript | ENST00000691036.1 | protein_coding | 5/10 | 534/2783 | 424/1083 | 142/360 | chr1 | TogoVar | ||
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
RAPH1_chr2_203428682_203540301 | 203441288 | T | TG | frameshift_variant | HIGH | HG00438.hp1 HG00438.hp2 HG00621.hp1 others(33): Show |
a0002a0006 | a0002c0005a0002c0006a0002c0012others(8): Show | a0002c0005t0002a0002c0005t0003a0002c0005t0011others(28): Show | a0002c0005t0002g0136a0002c0005t0002g0168a0002c0005t0003g0145others(33): Show | 36 | 290 | 0.1241 | 1 | c.190 others(5): Show |
p.Pro others(5): Show |
RAPH1 | ENSG00000173166.18 | transcript | ENST00000319170.10 | protein_coding | 14/14 | 2092/9699 | 1901/3753 | 634/1250 | chr2 | TogoVar | ||
RECQL5_chr17_75621854_75672154 | 75630838 | C | CTG | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(144): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0001c0021others(6): Show | a0001c0001t0001a0001c0001t0010a0001c0002t0001others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0011others(111): Show | 147 | 378 | 0.3889 | 2 | c.158 others(15): Show |
RECQL5 | ENSG00000108469.15 | transcript | ENST00000317905.10 | protein_coding | 11/19 | chr17 | TogoVar | ||||||
RHBG_chr1_156364211_156390219 | 156384556 | T | TC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(229): Show |
a0002a0003a0005others(9): Show | a0002c0002a0002c0008a0003c0004others(16): Show | a0002c0002t0001a0002c0008t0001a0003c0004t0001others(16): Show | a0002c0002t0001g0003a0002c0002t0001g0011a0002c0002t0001g0014others(130): Show | 232 | 438 | 0.5297 | 1 | c.127 others(5): Show |
p.Asp others(5): Show |
RHBG | ENSG00000132677.13 | transcript | ENST00000537040.6 | protein_coding | 9/10 | 1311/1790 | 1272/1377 | 424/458 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
RTL8C_chrX_135027355_135038546 | 135032464 | T | TC | frameshift_variant | HIGH | NA18965.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0000 | 1 | 298 | 0.0034 | 1 | c.84d others(3): Show |
p.Phe others(4): Show |
RTL8C | ENSG00000134590.14 | transcript | ENST00000257013.9 | protein_coding | 1/1 | 114/1192 | 85/342 | 29/113 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RTL8C_chrX_135027355_135038546 | 135032605 | G | GC | frameshift_variant | HIGH | NA18965.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0000 | 1 | 298 | 0.0034 | 1 | c.225 others(4): Show |
p.Ala others(4): Show |
RTL8C | ENSG00000134590.14 | transcript | ENST00000257013.9 | protein_coding | 1/1 | 255/1192 | 226/342 | 76/113 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SCAPER_chr15_76342904_76910340 | 76883817 | T | C | start_lost | HIGH | HG00140.hp2 HG00544.hp2 HG00597.hp1 others(114): Show |
a0002a0003a0005others(4): Show | a0002c0002a0002c0022a0003c0003others(5): Show | a0002c0002t0002a0002c0022t0002a0003c0003t0002others(9): Show | a0002c0002t0002g0190a0002c0002t0002g0194a0002c0002t0002g0219others(114): Show | 117 | 312 | 0.3750 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 2/32 | 102/5033 | 1/4203 | 1/1400 | chr15 | TogoVar | ||
SCART1_chr10_133448945_133474760 | 133457333 | TC | T | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp2 HG00609.hp2 others(90): Show |
a0003a0004 | a0003c0003a0003c0007a0003c0008others(16): Show | a0003c0003t0003a0003c0007t0003a0003c0008t0003others(20): Show | a0003c0003t0003g0005a0003c0003t0003g0007a0003c0003t0003g0023others(62): Show | 93 | 434 | 0.2143 | -1 | c.444 others(4): Show |
p.Glu others(5): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 3/12 | 497/4929 | 444/3084 | 148/1027 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
SCART1_chr10_133448945_133474760 | 133464740 | CTGGGGTG | C | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00544.hp2 others(99): Show |
a0003a0004a0009others(8): Show | a0003c0003a0003c0007a0003c0008others(24): Show | a0003c0003t0003a0003c0007t0003a0003c0008t0003others(28): Show | a0003c0003t0003g0005a0003c0003t0003g0007a0003c0003t0003g0023others(69): Show | 102 | 434 | 0.2350 | -7 | c.211 others(16): Show |
p.Val others(5): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 7/12 | 2170/4929 | 2117/3084 | 706/1027 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
SCRN3_chr2_174390730_174434575 | 174427852 | TTCAAATT others(6): Show |
T | frameshift_variant | HIGH | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(85): Show |
a0000 | a0000c0002a0000c0004a0000c0008 | a0000c0002t0002a0000c0002t0004a0000c0002t0012others(2): Show | a0000c0002t0002g0002a0000c0002t0002g0009a0000c0002t0002g0010others(47): Show | 88 | 364 | 0.2418 | -13 | c.125 others(22): Show |
p.Asn others(5): Show |
SCRN3 | ENSG00000144306.15 | transcript | ENST00000272732.11 | protein_coding | 8/8 | 1348/3052 | 1251/1275 | 417/424 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SDHAF4_chr6_70561930_70594569 | 70579485 | C | T | stop_gained | HIGH | HG00673.hp1 HG00741.hp1 HG01167.hp1 others(4): Show |
a0003 | a0003c0004 | a0003c0004t0009a0003c0004t0011a0003c0004t0012 | a0003c0004t0009g0014a0003c0004t0011g0068a0003c0004t0011g0078others(2): Show | 7 | 370 | 0.0189 | 0 | c.136 others(3): Show |
p.Gln others(3): Show |
SDHAF4 | ENSG00000154079.6 | transcript | ENST00000370474.4 | protein_coding | 2/3 | 147/1183 | 136/327 | 46/108 | chr6 | TogoVar | ||
SERPINB11_chr18_63697960_63728893 | 63712604 | G | T | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(201): Show |
a0001a0004a0013 | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0005t0002a0001c0005t0005others(18): Show | a0001c0002t0001g0001a0001c0002t0001g0010a0001c0002t0001g0014others(79): Show | 204 | 422 | 0.4834 | 0 | c.268 others(3): Show |
p.Glu others(3): Show |
SERPINB11 | ENSG00000206072.13 | transcript | ENST00000544088.6 | protein_coding | 4/8 | 330/1735 | 268/1179 | 90/392 | chr18 | TogoVar | ||
SGSH_chr17_80204276_80225333 | 80217137 | C | CG | frameshift_variant | HIGH | HG00438.hp1 HG01993.hp1 HG03927.hp1 others(4): Show |
a0004 | a0004c0006a0004c0008 | a0004c0006t0001a0004c0008t0002 | a0004c0006t0001g0035a0004c0006t0001g0068a0004c0006t0001g0103others(3): Show | 7 | 420 | 0.0167 | 1 | c.143 others(4): Show |
p.His others(4): Show |
SGSH | ENSG00000181523.13 | transcript | ENST00000326317.11 | protein_coding | 2/8 | 163/2705 | 143/1509 | 48/502 | chr17 | TogoVar | ||
SHROOM2_chrX_9781429_9954443 | 9894475 | G | GT | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.567 others(8): Show |
p.Val others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 685/7474 | 568/4851 | 190/1616 | chrX | TogoVar | ||
SHROOM2_chrX_9781429_9954443 | 9894723 | T | TC | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.819 others(4): Show |
p.Gly others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 937/7474 | 820/4851 | 274/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9894744 | G | GC | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.840 others(4): Show |
p.Arg others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 958/7474 | 841/4851 | 281/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9894810 | T | TC | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.903 others(4): Show |
p.Trp others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 1021/7474 | 904/4851 | 302/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9894911 | G | GC | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.100 others(5): Show |
p.Gln others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 1124/7474 | 1007/4851 | 336/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9894959 | GC | G | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | -1 | c.105 others(5): Show |
p.Leu others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 1171/7474 | 1054/4851 | 352/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9895532 | G | GC | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.162 others(5): Show |
p.Glu others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 1744/7474 | 1627/4851 | 543/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9895766 | AC | A | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | -1 | c.186 others(5): Show |
p.Arg others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 1978/7474 | 1861/4851 | 621/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9895885 | C | CA | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.197 others(5): Show |
p.Thr others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 2096/7474 | 1979/4851 | 660/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9896031 | A | AC | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.212 others(5): Show |
p.Leu others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 2243/7474 | 2126/4851 | 709/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9896042 | G | GA | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.213 others(5): Show |
p.Ser others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 2253/7474 | 2136/4851 | 712/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar |