regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SMS_chrX_21935709_21999837 | 21992671 | AT | A | frameshift_variant | HIGH | NA18978.hp2 | a0004 | a0004c0004 | a0004c0004t0013 | a0004c0004t0013g0293 | 1 | 298 | 0.0034 | -1 | c.102 others(5): Show |
p.Ser others(5): Show |
SMS | ENSG00000102172.16 | transcript | ENST00000404933.7 | protein_coding | 10/11 | 1140/1703 | 1024/1101 | 342/366 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SMS_chrX_21935709_21999837 | 21994342 | T | TA | frameshift_variant | HIGH | NA18978.hp2 | a0004 | a0004c0004 | a0004c0004t0013 | a0004c0004t0013g0293 | 1 | 298 | 0.0034 | 1 | c.109 others(5): Show |
p.Pro others(5): Show |
SMS | ENSG00000102172.16 | transcript | ENST00000404933.7 | protein_coding | 11/11 | 1212/1703 | 1096/1101 | 366/366 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SNED1_chr2_240993618_241100568 | 241040189 | G | T | splice_donor_variant others(1): Show |
HIGH | NA18978.hp2 | a0003 | a0003c0004 | a0003c0004t0007 | a0003c0004t0007g0099 | 1 | 344 | 0.0029 | 0 | c.115 others(6): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 7/31 | chr2 | TogoVar | ||||||
SON_chr21_33538038_33582481 | 33576378 | G | GA | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | 1 | c.723 others(5): Show |
p.Ala others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7292/8393 | 7237/7281 | 2413/2426 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |
SON_chr21_33538038_33582481 | 33576390 | GA | G | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | -1 | c.724 others(5): Show |
p.Arg others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7303/8393 | 7248/7281 | 2416/2426 | chr21 | TogoVar | ||
SOX8_chr16_976770_991979 | 985156 | G | GC | frameshift_variant | HIGH | HG01261.hp1 HG02056.hp2 NA18956.hp1 others(6): Show |
a0000a0002 | a0000c0006a0000c0007a0002c0018others(2): Show | a0000c0006t0001a0000c0007t0002a0000c0007t0009others(3): Show | a0000c0006t0001g0001a0000c0007t0002g0002a0000c0007t0009g0002others(3): Show | 9 | 434 | 0.0207 | 1 | c.111 others(5): Show |
p.Ala others(5): Show |
SOX8 | ENSG00000005513.11 | transcript | ENST00000293894.4 | protein_coding | 3/3 | 1270/3087 | 1117/1341 | 373/446 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
SPANXN3_chrX_143503735_143522475 | 143509042 | G | GA | frameshift_variant | HIGH | NA18978.hp2 | a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0089 | 1 | 349 | 0.0029 | 1 | c.198 others(4): Show |
p.Gln others(4): Show |
SPANXN3 | ENSG00000189252.4 | transcript | ENST00000370503.2 | protein_coding | 2/2 | 282/590 | 198/426 | 66/141 | chrX | TogoVar | ||
SPATA31C1_chr9_87912962_87928657 | 87923373 | C | T | stop_gained | HIGH | HG00423.hp1 HG00438.hp1 HG00597.hp1 others(39): Show |
a0005a0023a0024others(2): Show | a0005c0005a0005c0034a0023c0028others(3): Show | a0005c0005t0001a0005c0034t0001a0023c0028t0003others(3): Show | a0005c0005t0001g0003a0005c0005t0001g0005a0005c0005t0001g0023others(6): Show | 42 | 388 | 0.1083 | 0 | c.346 others(4): Show |
p.Arg others(5): Show |
SPATA31C1 | ENSG00000230246.9 | transcript | ENST00000706933.1 | protein_coding | 4/4 | 3495/3779 | 3466/3567 | 1156/1188 | chr9 | TogoVar | ||
SPINK1_chr5_147819582_147836671 | 147828020 | A | G | splice_donor_variant others(1): Show |
HIGH | NA18978.hp2 NA19065.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 | 2 | 426 | 0.0047 | 0 | c.194 others(5): Show |
SPINK1 | ENSG00000164266.11 | transcript | ENST00000296695.10 | protein_coding | 3/3 | chr5 | TogoVar | ||||||
SPON2_chr4_1161932_1177583 | 1171887 | A | AG | frameshift_variant | HIGH | HG01074.hp1 HG01257.hp2 HG01978.hp2 others(15): Show |
a0004a0006 | a0004c0006a0004c0009a0004c0012others(4): Show | a0004c0006t0001a0004c0009t0001a0004c0012t0001others(4): Show | a0004c0006t0001g0010a0004c0006t0001g0017a0004c0009t0001g0024others(6): Show | 18 | 432 | 0.0417 | 1 | c.184 others(4): Show |
p.Leu others(4): Show |
SPON2 | ENSG00000159674.12 | transcript | ENST00000290902.10 | protein_coding | 2/6 | 227/1579 | 184/996 | 62/331 | chr4 | TogoVar | ||
SPSB2_chr12_6865935_6878303 | 6872998 | C | T | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00544.hp2 HG00609.hp2 others(74): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0016others(7): Show | 77 | 398 | 0.1935 | 0 | c.-96 others(5): Show |
SPSB2 | ENSG00000111671.10 | transcript | ENST00000524270.6 | protein_coding | 1/2 | chr12 | TogoVar | ||||||
SRSF3_chr6_36589362_36610600 | 36601940 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00438.hp2 HG00544.hp2 others(95): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0021a0001c0001t0001g0045a0001c0001t0001g0051others(85): Show | 98 | 382 | 0.2565 | 1 | c.468 others(6): Show |
SRSF3 | ENSG00000112081.17 | transcript | ENST00000373715.11 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
STARD5_chr15_81304053_81329141 | 81322464 | G | A | stop_gained | HIGH | NA18978.hp2 | a0004 | a0004c0009 | a0004c0009t0001 | a0004c0009t0001g0224 | 1 | 452 | 0.0022 | 0 | c.226 others(3): Show |
p.Arg others(3): Show |
STARD5 | ENSG00000172345.14 | transcript | ENST00000302824.7 | protein_coding | 3/6 | 268/4887 | 226/642 | 76/213 | chr15 | TogoVar | ||
SUN2_chr22_38729734_38760998 | 38749811 | C | CG | frameshift_variant | HIGH | HG01433.hp1 HG01928.hp1 HG03471.hp2 others(7): Show |
a0005a0009 | a0005c0006a0005c0010a0005c0011others(2): Show | a0005c0006t0001a0005c0006t0004a0005c0006t0011others(4): Show | a0005c0006t0001g0072a0005c0006t0001g0103a0005c0006t0004g0052others(7): Show | 10 | 350 | 0.0286 | 1 | c.568 others(4): Show |
p.Arg others(5): Show |
SUN2 | ENSG00000100242.16 | transcript | ENST00000689035.1 | protein_coding | 6/18 | 841/3960 | 568/2154 | 190/717 | chr22 | TogoVar | ||
SYT12_chr11_67018134_67055863 | 67044591 | A | G | splice_acceptor_variant others(1): Show |
HIGH | NA18978.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0227 | 1 | 296 | 0.0034 | 0 | c.838 others(5): Show |
SYT12 | ENSG00000173227.14 | transcript | ENST00000527043.6 | protein_coding | 5/7 | chr11 | TogoVar | ||||||
TAF11L10_chr5_17592232_17602828 | 17597711 | TGGGTGCT others(724): Show |
T | start_lost others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00408.hp2 others(147): Show |
a0002a0011 | a0002c0002a0002c0006a0011c0007 | a0002c0002t0000a0002c0006t0000a0011c0007t0000 | a0002c0002t0000g0000a0002c0006t0000g0000a0011c0007t0000g0000 | 150 | 352 | 0.4261 | -731 | c.-61 others(8): Show |
p.Met others(10): Show |
TAF11L10 | ENSG00000284356.1 | transcript | ENST00000638842.1 | protein_coding | 1/1 | 117/597 | 1/597 | 1/198 | chr5 | TogoVar | ||
TAFAZZIN_chrX_154406539_154426726 | 154419595 | TG | T | frameshift_variant | HIGH | NA18978.hp2 | a0006 | a0006c0004 | a0006c0004t0008 | a0006c0004t0008g0075 | 1 | 285 | 0.0035 | -1 | c.517 others(4): Show |
p.Asp others(5): Show |
TAFAZZIN | ENSG00000102125.17 | transcript | ENST00000601016.6 | protein_coding | 6/11 | 822/1906 | 517/879 | 173/292 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TAFAZZIN_chrX_154406539_154426726 | 154420036 | C | CG | frameshift_variant | HIGH | NA18978.hp2 | a0006 | a0006c0004 | a0006c0004t0008 | a0006c0004t0008g0075 | 1 | 285 | 0.0035 | 1 | c.591 others(4): Show |
p.Arg others(5): Show |
TAFAZZIN | ENSG00000102125.17 | transcript | ENST00000601016.6 | protein_coding | 8/11 | 897/1906 | 592/879 | 198/292 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TAFAZZIN_chrX_154406539_154426726 | 154420248 | T | TC | frameshift_variant | HIGH | NA18978.hp2 | a0006 | a0006c0004 | a0006c0004t0008 | a0006c0004t0008g0075 | 1 | 285 | 0.0035 | 1 | c.688 others(4): Show |
p.Arg others(5): Show |
TAFAZZIN | ENSG00000102125.17 | transcript | ENST00000601016.6 | protein_coding | 9/11 | 994/1906 | 689/879 | 230/292 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TAFAZZIN_chrX_154406539_154426726 | 154420657 | G | GA | frameshift_variant | HIGH | NA18978.hp2 | a0006 | a0006c0004 | a0006c0004t0008 | a0006c0004t0008g0075 | 1 | 285 | 0.0035 | 1 | c.703 others(4): Show |
p.Ile others(5): Show |
TAFAZZIN | ENSG00000102125.17 | transcript | ENST00000601016.6 | protein_coding | 10/11 | 1009/1906 | 704/879 | 235/292 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TAP2_chr6_32820415_32843739 | 32828908 | A | G | stop_lost | HIGH | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(156): Show |
a0000 | a0000c0002a0000c0006a0000c0008others(19): Show | a0000c0002t0001a0000c0002t0003a0000c0002t0025others(28): Show | a0000c0002t0001g0001a0000c0002t0001g0037a0000c0002t0001g0040others(70): Show | 159 | 485 | 0.3278 | 0 | c.205 others(4): Show |
p.Ter others(11): Show |
TAP2 | ENSG00000204267.19 | transcript | ENST00000374897.4 | protein_coding | 12/12 | 2150/5643 | 2059/2061 | 687/686 | chr6 | TogoVar | ||
TBC1D19_chr4_26579084_26761223 | 26735441 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(270): Show | 274 | 310 | 0.8839 | 1 | c.108 others(7): Show |
TBC1D19 | ENSG00000109680.11 | transcript | ENST00000264866.9 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
TBC1D31_chr8_123067707_123157153 | 123142457 | G | T | splice_donor_variant others(1): Show |
HIGH | HG00323.hp2 HG00423.hp2 HG00438.hp2 others(86): Show |
a0001a0002a0010 | a0001c0001a0001c0003a0001c0008others(6): Show | a0001c0001t0001a0001c0003t0001a0001c0008t0001others(6): Show | a0001c0001t0001g0003a0001c0001t0001g0043a0001c0001t0001g0162others(85): Show | 89 | 322 | 0.2764 | 0 | c.283 others(6): Show |
TBC1D31 | ENSG00000156787.17 | transcript | ENST00000287380.6 | protein_coding | 19/21 | chr8 | TogoVar | ||||||
TEX26_chr13_30927656_30980500 | 30956872 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(99): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0001 | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0006others(88): Show | 102 | 414 | 0.2464 | 0 | c.313 others(5): Show |
TEX26 | ENSG00000175664.10 | transcript | ENST00000380473.8 | protein_coding | 3/6 | chr13 | TogoVar | ||||||
TMEM67_chr8_93749894_93823121 | 93755751 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00673.hp1 HG00741.hp2 others(16): Show |
a0001a0002a0006 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0003t0001a0002c0002t0001others(1): Show | a0001c0001t0001g0275a0001c0001t0001g0279a0001c0001t0001g0282others(16): Show | 19 | 318 | 0.0598 | 1 | c.224 others(6): Show |
TMEM67 | ENSG00000164953.17 | transcript | ENST00000453321.8 | protein_coding | 1/27 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
TMPRSS3_chr21_42366890_42401052 | 42383199 | C | CTA | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(99): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0003a0002c0007others(6): Show | a0001c0001t0001a0002c0003t0001a0002c0003t0002others(16): Show | a0001c0001t0001g0251a0002c0003t0001g0007a0002c0003t0001g0011others(80): Show | 102 | 472 | 0.2161 | 2 | c.617 others(13): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 7/12 | chr21 | TogoVar | ||||||
TNK2_chr3_195858364_195913551 | 195868357 | C | CG | frameshift_variant | HIGH | HG00597.hp1 HG00621.hp1 HG00639.hp1 others(50): Show |
a0002a0013a0016others(3): Show | a0002c0004a0002c0008a0002c0010others(20): Show | a0002c0004t0001a0002c0004t0002a0002c0008t0001others(24): Show | a0002c0004t0001g0131a0002c0004t0001g0256a0002c0004t0001g0279others(50): Show | 53 | 372 | 0.1425 | 1 | c.194 others(5): Show |
p.Pro others(5): Show |
TNK2 | ENSG00000061938.21 | transcript | ENST00000672887.2 | protein_coding | 13/16 | 2025/4070 | 1940/3168 | 647/1055 | chr3 | TogoVar | ||
TNRC6C_chr17_77953703_78113822 | 78086948 | G | GC | frameshift_variant | HIGH | HG01993.hp1 HG02055.hp1 HG02080.hp1 others(6): Show |
a0003a0007a0013others(1): Show | a0003c0012a0003c0021a0003c0022others(4): Show | a0003c0012t0001a0003c0021t0002a0003c0022t0021others(5): Show | a0003c0012t0001g0022a0003c0012t0001g0220a0003c0021t0002g0113others(6): Show | 9 | 276 | 0.0326 | 1 | c.428 others(5): Show |
p.Pro others(6): Show |
TNRC6C | ENSG00000078687.18 | transcript | ENST00000696270.1 | protein_coding | 15/23 | 4887/10391 | 4284/5811 | 1428/1936 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
TRIM51G_chr11_48970498_48988885 | 48979006 | G | A | stop_gained | HIGH | HG00099.hp1 HG00408.hp1 HG00438.hp1 others(136): Show |
a0002a0012a0013 | a0002c0002a0002c0004a0002c0015others(3): Show | a0002c0002t0002a0002c0004t0002a0002c0015t0002others(3): Show | a0002c0002t0002g0005a0002c0002t0002g0007a0002c0002t0002g0009others(58): Show | 139 | 424 | 0.3278 | 0 | c.604 others(3): Show |
p.Gln others(4): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/7 | 755/1510 | 604/1359 | 202/452 | chr11 | TogoVar | ||
TRO_chrX_54915824_54936431 | 54930453 | A | AG | frameshift_variant | HIGH | NA18978.hp2 | a0010 | a0010c0014 | a0010c0014t0001 | a0010c0014t0001g0002 | 1 | 310 | 0.0032 | 1 | c.373 others(5): Show |
p.Thr others(6): Show |
TRO | ENSG00000067445.22 | transcript | ENST00000173898.12 | protein_coding | 12/13 | 3831/4634 | 3732/4296 | 1244/1431 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TRO_chrX_54915824_54936431 | 54930497 | G | GT | frameshift_variant | HIGH | NA18978.hp2 | a0010 | a0010c0014 | a0010c0014t0001 | a0010c0014t0001g0002 | 1 | 310 | 0.0032 | 1 | c.377 others(5): Show |
p.Gly others(6): Show |
TRO | ENSG00000067445.22 | transcript | ENST00000173898.12 | protein_coding | 12/13 | 3877/4634 | 3778/4296 | 1260/1431 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TRO_chrX_54915824_54936431 | 54930781 | A | AC | frameshift_variant | HIGH | NA18978.hp2 | a0010 | a0010c0014 | a0010c0014t0001 | a0010c0014t0001g0002 | 1 | 310 | 0.0032 | 1 | c.405 others(5): Show |
p.Ser others(6): Show |
TRO | ENSG00000067445.22 | transcript | ENST00000173898.12 | protein_coding | 12/13 | 4159/4634 | 4060/4296 | 1354/1431 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TRO_chrX_54915824_54936431 | 54930969 | C | CT | frameshift_variant | HIGH | NA18978.hp2 | a0010 | a0010c0014 | a0010c0014t0001 | a0010c0014t0001g0002 | 1 | 310 | 0.0032 | 1 | c.424 others(5): Show |
p.Gly others(6): Show |
TRO | ENSG00000067445.22 | transcript | ENST00000173898.12 | protein_coding | 12/13 | 4348/4634 | 4249/4296 | 1417/1431 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TUBA3E_chr2_130186745_130203439 | 130197356 | ACACACCT others(2467): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(174): Show |
a0001 | a0001c0002a0001c0005a0001c0011others(14): Show | a0001c0002t0002a0001c0005t0002a0001c0011t0002others(14): Show | a0001c0002t0002g0002a0001c0002t0002g0003a0001c0002t0002g0006others(31): Show | 177 | 428 | 0.4136 | -2474 | c.-14 others(11): Show |
TUBA3E | ENSG00000152086.9 | transcript | ENST00000312988.9 | protein_coding | 1/5 | chr2 | TogoVar | ||||||
USP17L26_chr4_9329658_9341250 | 9336065 | A | T | stop_gained | HIGH | HG00621.hp1 HG02129.hp1 NA18957.hp1 others(2): Show |
a0005a0006a0021 | a0005c0008a0005c0034a0006c0044others(1): Show | a0005c0008t0000a0005c0034t0000a0006c0044t0000others(1): Show | a0005c0008t0000g0000a0005c0034t0000g0000a0006c0044t0000g0000others(1): Show | 5 | 102 | 0.0490 | 0 | c.140 others(4): Show |
p.Lys others(4): Show |
USP17L26 | ENSG00000229579.5 | transcript | ENST00000509660.1 | protein_coding | 1/1 | 1408/1593 | 1408/1593 | 470/530 | chr4 | TogoVar | ||
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
VCX_chrX_7838171_7849143 | 7843545 | C | CG | frameshift_variant | HIGH | NA18978.hp2 | a0055 | a0055c0113 | a0055c0113t0001 | a0055c0113t0001g0001 | 1 | 341 | 0.0029 | 1 | c.153 others(4): Show |
p.Lys others(4): Show |
VCX | ENSG00000182583.13 | transcript | ENST00000688183.1 | protein_coding | 2/2 | 187/781 | 154/621 | 52/206 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
VEGFD_chrX_15340596_15389413 | 15346146 | CG | C | frameshift_variant | HIGH | NA18978.hp2 | a0000 | a0000c0008 | a0000c0008t0008 | a0000c0008t0008g0090 | 1 | 302 | 0.0033 | -1 | c.105 others(5): Show |
p.Arg others(5): Show |
VEGFD | ENSG00000165197.5 | transcript | ENST00000297904.4 | protein_coding | 7/7 | 1518/2069 | 1051/1065 | 351/354 | chrX | TogoVar | ||
VPS26B_chr11_134219671_134252788 | 134245017 | T | TGTGCGCT others(12): Show |
frameshift_variant | HIGH | NA18978.hp2 | a0002 | a0002c0007 | a0002c0007t0002 | a0002c0007t0002g0161 | 1 | 430 | 0.0023 | 19 | c.802 others(26): Show |
p.Leu others(5): Show |
VPS26B | ENSG00000151502.11 | transcript | ENST00000281187.10 | protein_coding | 5/6 | 1273/3661 | 821/1011 | 274/336 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
VPS53_chr17_503668_719839 | 562529 | C | T | stop_gained | HIGH | NA18978.hp2 | a0006 | a0006c0012 | a0006c0012t0129 | a0006c0012t0129g0140 | 1 | 232 | 0.0043 | 0 | c.153 others(4): Show |
p.Trp others(4): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 14/22 | 1660/13089 | 1530/2499 | 510/832 | chr17 | TogoVar | ||
VSIG10L_chr19_51326541_51347139 | 51332638 | T | TG | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(448): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0003others(24): Show | a0000c0001t0001a0000c0001t0002a0000c0001t0006others(40): Show | a0000c0001t0001g0004a0000c0001t0001g0012a0000c0001t0001g0014others(104): Show | 451 | 452 | 0.9978 | 1 | c.257 others(5): Show |
p.Gln others(5): Show |
VSIG10L | ENSG00000186806.6 | transcript | ENST00000335624.5 | protein_coding | 10/10 | 2591/3689 | 2576/2604 | 859/867 | chr19 | TogoVar | ||
WDR13_chrX_48592492_48613869 | 48598731 | G | GC | frameshift_variant | HIGH | NA18978.hp2 | a0004 | a0004c0011 | a0004c0011t0110 | a0004c0011t0110g0073 | 1 | 310 | 0.0032 | 1 | c.57d others(3): Show |
p.Thr others(4): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 3/10 | 220/5457 | 58/1458 | 20/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48598735 | A | AC | frameshift_variant | HIGH | NA18978.hp2 | a0004 | a0004c0011 | a0004c0011t0110 | a0004c0011t0110g0073 | 1 | 310 | 0.0032 | 1 | c.62d others(3): Show |
p.Thr others(4): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 3/10 | 225/5457 | 63/1458 | 21/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48598777 | C | CA | frameshift_variant | HIGH | NA18978.hp2 | a0004 | a0004c0011 | a0004c0011t0110 | a0004c0011t0110g0073 | 1 | 310 | 0.0032 | 1 | c.103 others(4): Show |
p.Ser others(4): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 3/10 | 266/5457 | 104/1458 | 35/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48598805 | G | GC | frameshift_variant | HIGH | NA18978.hp2 | a0004 | a0004c0011 | a0004c0011t0110 | a0004c0011t0110g0073 | 1 | 310 | 0.0032 | 1 | c.131 others(4): Show |
p.Gly others(4): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 3/10 | 294/5457 | 132/1458 | 44/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZACN_chr17_76074182_76087806 | 76081716 | C | T | stop_gained | HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(86): Show |
a0003a0008a0009 | a0003c0003a0003c0012a0008c0013others(1): Show | a0003c0003t0001a0003c0012t0001a0008c0013t0001others(1): Show | a0003c0003t0001g0001a0003c0003t0001g0008a0003c0003t0001g0022others(5): Show | 89 | 392 | 0.2270 | 0 | c.841 others(3): Show |
p.Gln others(4): Show |
ZACN | ENSG00000186919.13 | transcript | ENST00000334586.10 | protein_coding | 7/9 | 924/1475 | 841/1239 | 281/412 | chr17 | TogoVar | ||
ZCCHC12_chrX_118818824_118831968 | 118826172 | TC | T | frameshift_variant | HIGH | NA18978.hp2 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0001 | 1 | 318 | 0.0031 | -1 | c.934 others(4): Show |
p.His others(5): Show |
ZCCHC12 | ENSG00000174460.4 | transcript | ENST00000310164.3 | protein_coding | 4/4 | 1407/2197 | 934/1209 | 312/402 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZFPM1_chr16_88448280_88542031 | 88534223 | G | GC | frameshift_variant | HIGH | HG00438.hp2 HG00558.hp1 HG00639.hp2 others(17): Show |
a0000a0011a0019others(1): Show | a0000c0015a0000c0021a0000c0031others(10): Show | a0000c0015t0004a0000c0015t0005a0000c0015t0019others(17): Show | a0000c0015t0004g0159a0000c0015t0005g0099a0000c0015t0019g0041others(17): Show | 20 | 318 | 0.0629 | 1 | c.227 others(5): Show |
p.Pro others(5): Show |
ZFPM1 | ENSG00000179588.9 | transcript | ENST00000319555.8 | protein_coding | 10/10 | 2633/5432 | 2274/3021 | 758/1006 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
ZFYVE19_chr15_40802089_40820084 | 40807701 | T | TGGGGC | frameshift_variant | HIGH | HG00099.hp2 HG00544.hp2 HG00558.hp1 others(115): Show |
a0002a0005a0006others(1): Show | a0002c0002a0002c0016a0002c0017others(3): Show | a0002c0002t0003a0002c0002t0005a0002c0002t0008others(8): Show | a0002c0002t0003g0002a0002c0002t0003g0007a0002c0002t0003g0011others(23): Show | 118 | 382 | 0.3089 | 5 | c.118 others(12): Show |
p.Arg others(4): Show |
ZFYVE19 | ENSG00000166140.17 | transcript | ENST00000355341.8 | protein_coding | 1/11 | 624/2775 | 123/1416 | 41/471 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |
ZNF211_chr19_57628168_57649041 | 57633347 | A | G | start_lost | HIGH | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(109): Show |
a0002a0004a0005others(2): Show | a0002c0002a0002c0013a0004c0007others(3): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0004others(12): Show | a0002c0002t0002g0002a0002c0002t0002g0016a0002c0002t0002g0021others(29): Show | 112 | 372 | 0.3011 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
ZNF211 | ENSG00000121417.14 | transcript | ENST00000240731.5 | protein_coding | 1/4 | 180/3773 | 1/1734 | 1/577 | chr19 | TogoVar |