regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PIK3R6_chr17_8797722_8872674 | 8823017 | G | A | stop_gained | HIGH | NA19000.hp1 | a0011 | a0011c0019 | a0011c0019t0001 | a0011c0019t0001g0113 | 1 | 354 | 0.0028 | 0 | c.169 others(4): Show |
p.Gln others(4): Show |
PIK3R6 | ENSG00000276231.5 | transcript | ENST00000619866.5 | protein_coding | 15/20 | 1933/3053 | 1696/2265 | 566/754 | chr17 | TogoVar | ||
PLEKHN1_chr1_961482_980865 | 974048 | GCTTGTGA others(26): Show |
G | frameshift_variant others(3): Show |
HIGH | NA19000.hp2 | a0017 | a0017c0043 | a0017c0043t0016 | a0017c0043t0016g0100 | 1 | 422 | 0.0024 | -33 | c.165 others(45): Show |
p.Leu others(5): Show |
PLEKHN1 | ENSG00000187583.11 | transcript | ENST00000379410.8 | protein_coding | 14/16 | 1702/3176 | 1652/1836 | 551/611 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
PLK4_chr4_127875893_127904224 | 127891075 | G | GT | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00438.hp2 HG00544.hp1 others(76): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0003a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0007a0001c0003t0001others(4): Show | a0001c0001t0001g0086a0001c0001t0001g0096a0001c0001t0001g0111others(43): Show | 79 | 364 | 0.2170 | 1 | c.183 others(7): Show |
PLK4 | ENSG00000142731.11 | transcript | ENST00000270861.10 | protein_coding | 7/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
PLK5_chr19_1519077_1541046 | 1534043 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00280.hp1 HG00280.hp2 HG00408.hp1 others(207): Show |
a0001a0006a0007others(2): Show | a0001c0001a0001c0016a0001c0020others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0005others(160): Show | 210 | 430 | 0.4884 | 0 | c.825 others(5): Show |
PLK5 | ENSG00000185988.15 | transcript | ENST00000454744.7 | protein_coding | 13/13 | chr19 | TogoVar | ||||||
PLPPR3_chr19_807488_826955 | 813562 | C | CG | frameshift_variant | HIGH | HG00544.hp1 HG01175.hp1 HG01934.hp1 others(4): Show |
a0000 | a0000c0009 | a0000c0009t0001a0000c0009t0002 | a0000c0009t0001g0024a0000c0009t0001g0068a0000c0009t0001g0119others(2): Show | 7 | 398 | 0.0176 | 1 | c.116 others(5): Show |
p.Ala others(5): Show |
PLPPR3 | ENSG00000129951.19 | transcript | ENST00000520876.8 | protein_coding | 8/8 | 1231/2306 | 1164/2157 | 388/718 | chr19 | TogoVar | ||
POMZP3_chr7_76604986_76632279 | 76611468 | CA | C | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(209): Show |
a0000 | a0000c0002a0000c0004a0000c0005others(6): Show | a0000c0002t0002a0000c0002t0003a0000c0002t0004others(25): Show | a0000c0002t0002g0003a0000c0002t0002g0007a0000c0002t0002g0014others(183): Show | 212 | 423 | 0.5012 | -1 | c.560 others(4): Show |
p.Leu others(5): Show |
POMZP3 | ENSG00000146707.15 | transcript | ENST00000310842.9 | protein_coding | 6/7 | 1283/1528 | 560/564 | 187/187 | chr7 | TogoVar | ||
POU3F2_chr6_98829574_98844458 | 98835104 | C | CG | frameshift_variant | HIGH | HG00408.hp1 HG00597.hp1 HG00597.hp2 others(44): Show |
a0002 | a0002c0002a0002c0004 | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(7): Show | a0002c0002t0001g0000a0002c0002t0002g0000a0002c0002t0004g0000others(7): Show | 47 | 436 | 0.1078 | 1 | c.239 others(4): Show |
p.Gly others(4): Show |
POU3F2 | ENSG00000184486.10 | transcript | ENST00000328345.8 | protein_coding | 1/1 | 540/4885 | 240/1332 | 80/443 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
PPIG_chr2_169579351_169646406 | 169584491 | G | A | splice_donor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00438.hp2 others(85): Show |
a0001 | a0001c0001a0001c0005a0001c0007 | a0001c0001t0002a0001c0001t0007a0001c0001t0009others(11): Show | a0001c0001t0002g0002a0001c0001t0002g0005a0001c0001t0002g0006others(80): Show | 88 | 382 | 0.2304 | 0 | c.-70 others(5): Show |
PPIG | ENSG00000138398.17 | transcript | ENST00000260970.8 | protein_coding | 1/13 | chr2 | TogoVar | ||||||
PRAMEF13_chr1_13191188_13206409 | 13198880 | A | T | stop_gained | HIGH | HG02280.hp2 HG02602.hp2 HG02630.hp1 others(7): Show |
a0003a0005a0006others(1): Show | a0003c0005a0003c0006a0005c0012others(5): Show | a0003c0005t0003a0003c0006t0003a0005c0012t0003others(5): Show | a0003c0005t0003g0004a0003c0006t0003g0012a0003c0006t0003g0013others(6): Show | 10 | 53 | 0.1887 | 0 | c.314 others(3): Show |
p.Leu others(4): Show |
PRAMEF13 | ENSG00000279169.3 | transcript | ENST00000625019.3 | protein_coding | 3/4 | 417/2163 | 314/1425 | 105/474 | chr1 | TogoVar | ||
PRAMEF2_chr1_12852086_12866909 | 12860036 | G | T | stop_gained | HIGH | HG00642.hp2 HG01515.hp2 HG02071.hp1 others(25): Show |
a0002a0014 | a0002c0002a0002c0022a0002c0023others(1): Show | a0002c0002t0003a0002c0022t0003a0002c0023t0008others(1): Show | a0002c0002t0003g0005a0002c0002t0003g0022a0002c0002t0003g0023others(3): Show | 28 | 338 | 0.0828 | 0 | c.631 others(3): Show |
p.Glu others(4): Show |
PRAMEF2 | ENSG00000120952.4 | transcript | ENST00000240189.2 | protein_coding | 3/4 | 718/1642 | 631/1425 | 211/474 | chr1 | TogoVar | ||
PRRT2_chr16_29807193_29820881 | 29813694 | G | GC | frameshift_variant | HIGH | HG00621.hp1 HG00735.hp2 HG01169.hp1 others(17): Show |
a0003a0004 | a0003c0003a0003c0007a0004c0004 | a0003c0003t0001a0003c0003t0002a0003c0003t0005others(5): Show | a0003c0003t0001g0001a0003c0003t0002g0001a0003c0003t0005g0001others(5): Show | 20 | 322 | 0.0621 | 1 | c.649 others(4): Show |
p.Arg others(5): Show |
PRRT2 | ENSG00000167371.21 | transcript | ENST00000358758.12 | protein_coding | 2/4 | 846/2462 | 650/1023 | 217/340 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
PSG7_chr19_42919132_42942207 | 42935542 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(373): Show |
a0001a0005a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(319): Show | 376 | 416 | 0.9039 | 0 | c.292 others(3): Show |
p.Arg others(3): Show |
PSG7 | ENSG00000221878.13 | transcript | ENST00000406070.7 | protein_coding | 2/6 | 423/2067 | 292/1260 | 98/419 | chr19 | TogoVar | ||
PTEN_chr10_87858625_87976930 | 87960876 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(84): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(27): Show | a0001c0001t0002g0009a0001c0001t0002g0144a0001c0001t0002g0211others(84): Show | 87 | 322 | 0.2702 | 1 | c.802 others(6): Show |
PTEN | ENSG00000171862.15 | transcript | ENST00000371953.8 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
PTPN23_chr3_47376021_47418435 | 47410831 | A | AC | frameshift_variant | HIGH | HG00140.hp2 HG00597.hp1 HG00738.hp2 others(33): Show |
a0005a0006 | a0005c0007a0005c0010a0005c0029others(7): Show | a0005c0007t0001a0005c0010t0001a0005c0029t0001others(7): Show | a0005c0007t0001g0001a0005c0007t0001g0008a0005c0007t0001g0016others(31): Show | 36 | 332 | 0.1084 | 1 | c.304 others(5): Show |
p.Leu others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3117/5237 | 3041/4911 | 1014/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PTPN23_chr3_47376021_47418435 | 47411089 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00558.hp2 others(132): Show |
a0002a0004a0005others(6): Show | a0002c0003a0002c0008a0002c0009others(19): Show | a0002c0003t0001a0002c0008t0001a0002c0008t0002others(20): Show | a0002c0003t0001g0001a0002c0003t0001g0002a0002c0003t0001g0012others(118): Show | 135 | 332 | 0.4066 | 1 | c.329 others(5): Show |
p.Arg others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3373/5237 | 3297/4911 | 1099/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PUSL1_chr1_1303597_1316677 | 1308915 | C | CG | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG01123.hp1 others(16): Show |
a0002 | a0002c0002a0002c0008 | a0002c0002t0001a0002c0008t0001 | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0008t0001g0004 | 19 | 352 | 0.0540 | 1 | c.82d others(3): Show |
p.Val others(4): Show |
PUSL1 | ENSG00000169972.13 | transcript | ENST00000379031.10 | protein_coding | 2/8 | 130/1257 | 83/912 | 28/303 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
PZP_chr12_9143840_9213395 | 9181030 | G | A | stop_gained | HIGH | HG00423.hp1 HG02074.hp1 HG02083.hp2 others(14): Show |
a0005 | a0005c0008a0005c0019 | a0005c0008t0001a0005c0019t0001 | a0005c0008t0001g0022a0005c0008t0001g0023a0005c0008t0001g0132others(12): Show | 17 | 334 | 0.0509 | 0 | c.179 others(4): Show |
p.Gln others(4): Show |
PZP | ENSG00000126838.10 | transcript | ENST00000261336.7 | protein_coding | 15/36 | 1846/4635 | 1792/4449 | 598/1482 | chr12 | TogoVar | ||
RAD17_chr5_69364818_69419801 | 69371436 | T | TC | splice_acceptor_variant others(1): Show |
HIGH | HG00609.hp1 HG00642.hp1 HG01243.hp1 others(25): Show |
a0001a0010 | a0001c0001a0010c0011 | a0001c0001t0002a0010c0011t0002 | a0001c0001t0002g0326a0001c0001t0002g0327a0001c0001t0002g0328others(25): Show | 28 | 359 | 0.0780 | 1 | c.-27 others(7): Show |
RAD17 | ENSG00000152942.19 | transcript | ENST00000354868.10 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
RASA4_chr7_102574646_102621756 | 102588790 | AAGTAGCT others(3162): Show |
A | exon_loss_variant others(4): Show |
HIGH | HG00733.hp2 HG01346.hp1 HG01517.hp1 others(12): Show |
a0006a0012a0029others(4): Show | a0006c0005a0006c0045a0012c0009others(5): Show | a0006c0005t0006a0006c0005t0008a0006c0005t0022others(9): Show | a0006c0005t0006g0103a0006c0005t0006g0106a0006c0005t0006g0109others(12): Show | 15 | 130 | 0.1154 | -3169 | c.183 others(18): Show |
RASA4 | ENSG00000105808.19 | transcript | ENST00000262940.12 | protein_coding | 17/21 | chr7 | TogoVar | ||||||
RAVER1_chr19_10311212_10338529 | 10330523 | CTTCCTGT others(4): Show |
C | splice_acceptor_variant others(3): Show |
HIGH | NA19000.hp2 | a0015 | a0015c0029 | a0015c0029t0001 | a0015c0029t0001g0144 | 1 | 438 | 0.0023 | -11 | c.220 others(20): Show |
p.Glu others(11): Show |
RAVER1 | ENSG00000161847.15 | transcript | ENST00000617231.5 | protein_coding | 2/13 | 244/3484 | 220/2220 | 74/739 | chr19 | TogoVar | ||
RAX2_chr19_3764089_3777228 | 3770840 | C | CG | frameshift_variant | HIGH | HG01433.hp2 HG02055.hp1 HG02148.hp2 others(15): Show |
a0000 | a0000c0002a0000c0006 | a0000c0002t0001a0000c0002t0002a0000c0002t0003others(3): Show | a0000c0002t0001g0006a0000c0002t0002g0027a0000c0002t0002g0050others(5): Show | 18 | 436 | 0.0413 | 1 | c.335 others(4): Show |
p.Ala others(5): Show |
RAX2 | ENSG00000173976.16 | transcript | ENST00000555633.3 | protein_coding | 3/3 | 669/2421 | 335/555 | 112/184 | chr19 | TogoVar | ||
RBM3_chrX_48569484_48586162 | 48575573 | AG | A | frameshift_variant | HIGH | NA19000.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0001 | 1 | 295 | 0.0034 | -1 | c.118 others(4): Show |
p.Asp others(4): Show |
RBM3 | ENSG00000102317.18 | transcript | ENST00000376759.8 | protein_coding | 3/7 | 221/4298 | 118/474 | 40/157 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RECQL5_chr17_75621854_75672154 | 75630838 | C | CTG | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(144): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0001c0021others(6): Show | a0001c0001t0001a0001c0001t0010a0001c0002t0001others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0011others(111): Show | 147 | 378 | 0.3889 | 2 | c.158 others(15): Show |
RECQL5 | ENSG00000108469.15 | transcript | ENST00000317905.10 | protein_coding | 11/19 | chr17 | TogoVar | ||||||
REG3A_chr2_79152006_79164753 | 79159405 | T | C | start_lost | HIGH | NA19000.hp1 | a0004 | a0004c0010 | a0004c0010t0001 | a0004c0010t0001g0033 | 1 | 436 | 0.0023 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
REG3A | ENSG00000172016.16 | transcript | ENST00000305165.3 | protein_coding | 2/6 | 61/808 | 1/528 | 1/175 | chr2 | TogoVar | ||
RETSAT_chr2_85336955_85359528 | 85350038 | AC | A | splice_donor_variant others(1): Show |
HIGH | HG00673.hp1 HG02129.hp1 NA18940.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0102a0001c0001t0002g0011a0001c0001t0002g0101 | 11 | 384 | 0.0287 | -1 | c.799 others(6): Show |
RETSAT | ENSG00000042445.14 | transcript | ENST00000295802.9 | protein_coding | 4/10 | chr2 | TogoVar | ||||||
RNF32_chr7_156635774_156682130 | 156675865 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00438.hp2 HG00609.hp2 HG01168.hp2 others(52): Show |
a0002a0003a0004others(1): Show | a0002c0002a0003c0003a0004c0005others(1): Show | a0002c0002t0001a0003c0003t0002a0003c0003t0004others(3): Show | a0002c0002t0001g0077a0003c0003t0002g0053a0003c0003t0002g0190others(41): Show | 55 | 448 | 0.1228 | 0 | c.852 others(5): Show |
RNF32 | ENSG00000105982.17 | transcript | ENST00000317955.10 | protein_coding | 8/8 | chr7 | TogoVar | ||||||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00544.hp1 HG00558.hp2 others(101): Show |
a0001a0006a0007 | a0001c0001a0001c0004a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0010others(101): Show | 104 | 386 | 0.2694 | 3 | c.100 others(16): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SCRN3_chr2_174390730_174434575 | 174427852 | TTCAAATT others(6): Show |
T | frameshift_variant | HIGH | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(85): Show |
a0000 | a0000c0002a0000c0004a0000c0008 | a0000c0002t0002a0000c0002t0004a0000c0002t0012others(2): Show | a0000c0002t0002g0002a0000c0002t0002g0009a0000c0002t0002g0010others(47): Show | 88 | 364 | 0.2418 | -13 | c.125 others(22): Show |
p.Asn others(5): Show |
SCRN3 | ENSG00000144306.15 | transcript | ENST00000272732.11 | protein_coding | 8/8 | 1348/3052 | 1251/1275 | 417/424 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SETBP1_chr18_44675888_45073510 | 45063530 | A | AC | frameshift_variant | HIGH | HG01496.hp2 HG01978.hp2 HG02004.hp2 others(5): Show |
a0005a0006a0007 | a0005c0006a0006c0007a0007c0008 | a0005c0006t0001a0005c0006t0003a0005c0006t0022others(3): Show | a0005c0006t0001g0007a0005c0006t0001g0075a0005c0006t0003g0022others(5): Show | 8 | 140 | 0.0571 | 1 | c.462 others(5): Show |
p.Leu others(6): Show |
SETBP1 | ENSG00000152217.20 | transcript | ENST00000649279.2 | protein_coding | 6/6 | 4935/9909 | 4629/4791 | 1543/1596 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |
SETD1B_chr12_121799009_121837656 | 121814258 | G | GC | frameshift_variant | HIGH | HG00597.hp1 HG00639.hp1 HG01934.hp1 others(8): Show |
a0004a0005 | a0004c0008a0004c0020a0004c0021others(3): Show | a0004c0008t0003a0004c0020t0001a0004c0021t0002others(4): Show | a0004c0008t0003g0136a0004c0008t0003g0154a0004c0008t0003g0163others(8): Show | 11 | 262 | 0.0420 | 1 | c.204 others(5): Show |
p.Pro others(5): Show |
SETD1B | ENSG00000139718.12 | transcript | ENST00000604567.6 | protein_coding | 7/17 | 2288/8557 | 2049/5901 | 683/1966 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
SETD1B_chr12_121799009_121837656 | 121814285 | G | GC | frameshift_variant | HIGH | HG00438.hp1 HG00438.hp2 HG00544.hp1 others(24): Show |
a0002a0005a0022 | a0002c0004a0002c0006a0002c0007others(7): Show | a0002c0004t0002a0002c0004t0004a0002c0006t0001others(11): Show | a0002c0004t0002g0010a0002c0004t0002g0011a0002c0004t0002g0055others(23): Show | 27 | 262 | 0.1031 | 1 | c.207 others(5): Show |
p.Pro others(5): Show |
SETD1B | ENSG00000139718.12 | transcript | ENST00000604567.6 | protein_coding | 7/17 | 2318/8557 | 2079/5901 | 693/1966 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
SHISA7_chr19_55423740_55448300 | 55433477 | C | CG | frameshift_variant | HIGH | HG01175.hp1 HG01175.hp2 HG01261.hp1 others(7): Show |
a0000 | a0000c0002 | a0000c0002t0001a0000c0002t0002a0000c0002t0007others(1): Show | a0000c0002t0001g0064a0000c0002t0001g0070a0000c0002t0001g0089others(7): Show | 10 | 372 | 0.0269 | 1 | c.129 others(5): Show |
p.Arg others(5): Show |
SHISA7 | ENSG00000187902.13 | transcript | ENST00000376325.10 | protein_coding | 4/4 | 1732/6470 | 1295/1617 | 432/538 | chr19 | TogoVar | ||
SLC22A10_chr11_63284903_63316783 | 63290453 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(160): Show |
a0002a0011 | a0002c0002a0002c0009a0002c0012others(4): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0007others(7): Show | a0002c0002t0002g0001a0002c0002t0002g0004a0002c0002t0002g0005others(95): Show | 163 | 402 | 0.4055 | 0 | c.288 others(3): Show |
p.Trp others(3): Show |
SLC22A10 | ENSG00000184999.13 | transcript | ENST00000332793.11 | protein_coding | 1/10 | 551/2638 | 288/1626 | 96/541 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A31_chr16_89190761_89205537 | 89196258 | GCCTGGCC others(74): Show |
G | frameshift_variant others(3): Show |
HIGH | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(170): Show |
a0002a0005a0006others(4): Show | a0002c0002a0002c0004a0002c0007others(9): Show | a0002c0002t0001a0002c0002t0002a0002c0004t0001others(10): Show | a0002c0002t0001g0002a0002c0002t0001g0010a0002c0002t0001g0014others(30): Show | 173 | 428 | 0.4042 | -81 | c.103 others(93): Show |
p.Arg others(5): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 9/9 | 1117/1615 | 1035/1341 | 345/446 | chr16 | TogoVar | ||
SLC25A36_chr3_140936836_140985995 | 140956506 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00738.hp1 HG01243.hp1 HG02559.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0008a0001c0001t0016a0001c0001t0022others(6): Show | a0001c0001t0008g0001a0001c0001t0008g0231a0001c0001t0008g0232others(11): Show | 17 | 270 | 0.0630 | 1 | c.42- others(5): Show |
SLC25A36 | ENSG00000114120.14 | transcript | ENST00000324194.12 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar | ||
SLC7A13_chr8_86209063_86235381 | 86214405 | TCCGACAT others(1): Show |
T | frameshift_variant others(1): Show |
HIGH | HG00438.hp1 HG00544.hp1 HG01070.hp1 others(92): Show |
a0000 | a0000c0002a0000c0015a0000c0024 | a0000c0002t0002a0000c0015t0002a0000c0024t0002 | a0000c0002t0002g0002a0000c0002t0002g0008a0000c0002t0002g0012others(18): Show | 95 | 428 | 0.2220 | -8 | c.141 others(15): Show |
p.Ter others(5): Show |
SLC7A13 | ENSG00000164893.9 | transcript | ENST00000297524.8 | protein_coding | 4/4 | 1524/1867 | 1413/1413 | 471/470 | chr8 | TogoVar | ||
SNX27_chr1_151607050_151704080 | 151692406 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(82): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(48): Show | a0001c0001t0001g0113a0001c0001t0001g0117a0001c0001t0001g0118others(82): Show | 85 | 366 | 0.2322 | 1 | c.124 others(7): Show |
SNX27 | ENSG00000143376.14 | transcript | ENST00000458013.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SON_chr21_33538038_33582481 | 33576378 | G | GA | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | 1 | c.723 others(5): Show |
p.Ala others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7292/8393 | 7237/7281 | 2413/2426 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |
SON_chr21_33538038_33582481 | 33576390 | GA | G | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | -1 | c.724 others(5): Show |
p.Arg others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7303/8393 | 7248/7281 | 2416/2426 | chr21 | TogoVar | ||
SPATA21_chr1_16393643_16442424 | 16398776 | G | A | stop_gained | HIGH | NA18940.hp2 NA18945.hp1 NA18961.hp2 others(6): Show |
a0006 | a0006c0006 | a0006c0006t0001a0006c0006t0002 | a0006c0006t0001g0120a0006c0006t0002g0276a0006c0006t0002g0277others(6): Show | 9 | 352 | 0.0256 | 0 | c.139 others(4): Show |
p.Arg others(4): Show |
SPATA21 | ENSG00000187144.11 | transcript | ENST00000335496.5 | protein_coding | 13/13 | 1882/2015 | 1399/1410 | 467/469 | chr1 | TogoVar | ||
SPATA31C1_chr9_87912962_87928657 | 87923373 | C | T | stop_gained | HIGH | HG00423.hp1 HG00438.hp1 HG00597.hp1 others(39): Show |
a0005a0023a0024others(2): Show | a0005c0005a0005c0034a0023c0028others(3): Show | a0005c0005t0001a0005c0034t0001a0023c0028t0003others(3): Show | a0005c0005t0001g0003a0005c0005t0001g0005a0005c0005t0001g0023others(6): Show | 42 | 388 | 0.1083 | 0 | c.346 others(4): Show |
p.Arg others(5): Show |
SPATA31C1 | ENSG00000230246.9 | transcript | ENST00000706933.1 | protein_coding | 4/4 | 3495/3779 | 3466/3567 | 1156/1188 | chr9 | TogoVar | ||
SPATA31C2_chr9_88124305_88143475 | 88135258 | ATTGGAGT others(3483): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00099.hp2 HG01070.hp1 HG01123.hp2 others(8): Show |
a0005 | a0005c0006 | a0005c0006t0003 | a0005c0006t0003g0069a0005c0006t0003g0070a0005c0006t0003g0071others(5): Show | 11 | 446 | 0.0247 | -3490 | c.-30 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | ||||||
SPATA45_chr1_212825141_212852649 | 212829026 | ACACAAAG others(11290): Show |
A | exon_loss_variant | HIGH | HG00738.hp1 HG00741.hp2 HG03492.hp1 others(8): Show |
a0000 | a0000c0000 | a0000c0000t0002 | a0000c0000t0002g0011a0000c0000t0002g0028a0000c0000t0002g0048others(1): Show | 11 | 402 | 0.0274 | -11297 | c.-38 others(14): Show |
SPATA45 | ENSG00000185523.6 | transcript | ENST00000332912.3 | protein_coding | 3/3 | chr1 | TogoVar | ||||||
SPDYE21_chr7_67271941_67294005 | 67281505 | T | TGGGTGGC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00558.hp1 others(128): Show |
a0002a0009a0012others(2): Show | a0002c0002a0002c0010a0009c0011others(3): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0017others(6): Show | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0002t0001g0004others(50): Show | 131 | 460 | 0.2848 | 7 | c.514 others(14): Show |
p.Glu others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 4/9 | 1065/3286 | 521/1209 | 174/402 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
SPON2_chr4_1161932_1177583 | 1171887 | A | AG | frameshift_variant | HIGH | HG01074.hp1 HG01257.hp2 HG01978.hp2 others(15): Show |
a0004a0006 | a0004c0006a0004c0009a0004c0012others(4): Show | a0004c0006t0001a0004c0009t0001a0004c0012t0001others(4): Show | a0004c0006t0001g0010a0004c0006t0001g0017a0004c0009t0001g0024others(6): Show | 18 | 432 | 0.0417 | 1 | c.184 others(4): Show |
p.Leu others(4): Show |
SPON2 | ENSG00000159674.12 | transcript | ENST00000290902.10 | protein_coding | 2/6 | 227/1579 | 184/996 | 62/331 | chr4 | TogoVar | ||
STAG2_chrX_123956706_124107656 | 124061743 | C | CTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp1 HG00438.hp1 HG00597.hp1 others(37): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(1): Show | a0001c0001t0001g0043a0001c0001t0001g0052a0001c0001t0001g0071others(37): Show | 40 | 276 | 0.1449 | 3 | c.153 others(16): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SYNE2_chr14_63848004_64231433 | 63993818 | A | AT | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00438.hp2 HG00609.hp2 others(75): Show |
a0001a0002a0003others(38): Show | a0001c0004a0001c0005a0001c0009others(51): Show | a0001c0004t0003a0001c0005t0001a0001c0005t0002others(59): Show | a0001c0004t0003g0071a0001c0005t0001g0030a0001c0005t0002g0044others(75): Show | 78 | 150 | 0.5200 | 1 | c.264 others(7): Show |
SYNE2 | ENSG00000054654.20 | transcript | ENST00000555002.6 | protein_coding | 21/115 | INFO_REALIGN_3_PRIME | chr14 | TogoVar |