regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TEX13C_chrX_125314871_125330214 | 125320641 | GGC | G | frameshift_variant | HIGH | NA19072.hp1 | a0010 | a0010c0013 | a0010c0013t0001 | a0010c0013t0001g0001 | 1 | 303 | 0.0033 | -2 | c.523 others(9): Show |
p.Ala others(5): Show |
TEX13C | ENSG00000282815.2 | transcript | ENST00000695840.1 | protein_coding | 1/2 | 772/4765 | 523/2982 | 175/993 | chrX | TogoVar | ||
TEX13C_chrX_125314871_125330214 | 125321163 | TC | T | frameshift_variant | HIGH | NA19072.hp1 | a0010 | a0010c0013 | a0010c0013t0001 | a0010c0013t0001g0001 | 1 | 303 | 0.0033 | -1 | c.104 others(5): Show |
p.Pro others(5): Show |
TEX13C | ENSG00000282815.2 | transcript | ENST00000695840.1 | protein_coding | 1/2 | 1298/4765 | 1049/2982 | 350/993 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TEX13C_chrX_125314871_125330214 | 125321304 | CA | C | frameshift_variant | HIGH | NA19072.hp1 | a0010 | a0010c0013 | a0010c0013t0001 | a0010c0013t0001g0001 | 1 | 303 | 0.0033 | -1 | c.118 others(5): Show |
p.Asn others(5): Show |
TEX13C | ENSG00000282815.2 | transcript | ENST00000695840.1 | protein_coding | 1/2 | 1436/4765 | 1187/2982 | 396/993 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TIGD6_chr5_149988118_150005654 | 149995316 | CT | C | frameshift_variant | HIGH | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(190): Show |
a0001a0004a0009others(5): Show | a0001c0001a0001c0017a0004c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0001a0001c0001t0001g0015a0001c0001t0001g0020others(31): Show | 193 | 436 | 0.4427 | -1 | c.103 others(5): Show |
p.Glu others(5): Show |
TIGD6 | ENSG00000164296.7 | transcript | ENST00000296736.4 | protein_coding | 2/2 | 1294/3493 | 1032/1566 | 344/521 | chr5 | TogoVar | ||
TIMM17B_chrX_48888449_48902768 | 48895071 | TG | T | frameshift_variant | HIGH | NA19072.hp1 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0026 | 1 | 301 | 0.0033 | -1 | c.156 others(4): Show |
p.Asn others(4): Show |
TIMM17B | ENSG00000126768.13 | transcript | ENST00000696123.1 | protein_coding | 3/6 | 175/818 | 156/519 | 52/172 | chrX | TogoVar | ||
TKTL1_chrX_154290795_154335350 | 154320781 | TC | T | frameshift_variant | HIGH | NA19072.hp1 | a0005 | a0005c0008 | a0005c0008t0008 | a0005c0008t0008g0014 | 1 | 272 | 0.0037 | -1 | c.105 others(5): Show |
p.Arg others(5): Show |
TKTL1 | ENSG00000007350.18 | transcript | ENST00000369915.8 | protein_coding | 8/13 | 1122/2518 | 1057/1791 | 353/596 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TLR8_chrX_12901620_12928169 | 12906707 | A | G | start_lost others(1): Show |
HIGH | HG00099.hp2 HG00423.hp1 HG00438.hp1 others(162): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0004a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0008a0001c0004t0001others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0011others(44): Show | 165 | 303 | 0.5446 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
TLR8 | ENSG00000101916.12 | transcript | ENST00000218032.7 | protein_coding | 1/2 | 88/4216 | 1/3126 | 1/1041 | chrX | TogoVar | ||
TMEM164_chrX_109998114_110182788 | 110171484 | CT | C | frameshift_variant | HIGH | NA19072.hp1 | a0003 | a0003c0003 | a0003c0003t0016 | a0003c0003t0016g0142 | 1 | 198 | 0.0051 | -1 | c.655 others(4): Show |
p.Tyr others(5): Show |
TMEM164 | ENSG00000157600.12 | transcript | ENST00000372068.7 | protein_coding | 6/7 | 994/5570 | 655/894 | 219/297 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TMEM216_chr11_61387587_61403846 | 61398269 | G | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00408.hp1 HG00408.hp2 others(173): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0008a0001c0005t0001others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0011others(24): Show | 176 | 270 | 0.6519 | 0 | c.432 others(5): Show |
TMEM216 | ENSG00000187049.11 | transcript | ENST00000515837.7 | protein_coding | 4/4 | chr11 | TogoVar | ||||||
TMPRSS11A_chr4_67904395_67968493 | 67963391 | C | T | start_lost | HIGH | HG00280.hp2 HG00323.hp1 HG00544.hp1 others(97): Show |
a0002a0003a0005others(1): Show | a0002c0002a0002c0015a0002c0018others(7): Show | a0002c0002t0002a0002c0002t0011a0002c0002t0019others(13): Show | a0002c0002t0002g0001a0002c0002t0002g0002a0002c0002t0002g0005others(79): Show | 100 | 394 | 0.2538 | 0 | c.3G> others(1): Show |
p.Met others(2): Show |
TMPRSS11A | ENSG00000187054.16 | transcript | ENST00000508048.6 | protein_coding | 1/10 | 103/3304 | 3/1257 | 1/418 | chr4 | TogoVar | ||
TMPRSS3_chr21_42366890_42401052 | 42383199 | C | CTA | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(99): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0003a0002c0007others(6): Show | a0001c0001t0001a0002c0003t0001a0002c0003t0002others(16): Show | a0001c0001t0001g0251a0002c0003t0001g0007a0002c0003t0001g0011others(80): Show | 102 | 472 | 0.2161 | 2 | c.617 others(13): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 7/12 | chr21 | TogoVar | ||||||
TNK1_chr17_7376089_7394742 | 7387376 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00438.hp2 others(53): Show |
a0001a0003a0009others(3): Show | a0001c0001a0001c0002a0001c0031others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0031t0001others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0043a0001c0001t0001g0048others(15): Show | 56 | 452 | 0.1239 | 0 | c.139 others(6): Show |
TNK1 | ENSG00000174292.13 | transcript | ENST00000688331.1 | protein_coding | 9/12 | chr17 | TogoVar | ||||||
TTLL3_chr3_9805262_9841365 | 9813074 | TAGCTCAG others(10): Show |
T | frameshift_variant | HIGH | NA19072.hp1 | a0019 | a0019c0023 | a0019c0023t0002 | a0019c0023t0002g0092 | 1 | 400 | 0.0025 | -17 | c.181 others(24): Show |
p.Ser others(4): Show |
TTLL3 | ENSG00000214021.18 | transcript | ENST00000685419.1 | protein_coding | 3/14 | 355/3498 | 181/2448 | 61/815 | chr3 | TogoVar | ||
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
USP9X_chrX_41080445_41241579 | 41205314 | TC | T | frameshift_variant | HIGH | NA19072.hp1 | a0004 | a0004c0009 | a0004c0009t0006 | a0004c0009t0006g0116 | 1 | 293 | 0.0034 | -1 | c.483 others(5): Show |
p.Arg others(6): Show |
USP9X | ENSG00000124486.15 | transcript | ENST00000378308.7 | protein_coding | 32/45 | 5662/12543 | 4839/7665 | 1613/2554 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
USP9X_chrX_41080445_41241579 | 41214670 | AG | A | frameshift_variant | HIGH | NA19072.hp1 | a0004 | a0004c0009 | a0004c0009t0006 | a0004c0009t0006g0116 | 1 | 293 | 0.0034 | -1 | c.529 others(5): Show |
p.Gly others(6): Show |
USP9X | ENSG00000124486.15 | transcript | ENST00000378308.7 | protein_coding | 34/45 | 6117/12543 | 5294/7665 | 1765/2554 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
VSIG10L2_chr11_125941044_125961319 | 125948513 | G | A | stop_gained | HIGH | HG00544.hp2 HG00597.hp1 HG00639.hp2 others(53): Show |
a0004a0012 | a0004c0004a0004c0008a0004c0023others(2): Show | a0004c0004t0001a0004c0008t0001a0004c0023t0001others(2): Show | a0004c0004t0001g0004a0004c0004t0001g0009a0004c0004t0001g0048others(10): Show | 56 | 446 | 0.1256 | 0 | c.642 others(3): Show |
p.Trp others(4): Show |
VSIG10L2 | ENSG00000283703.3 | transcript | ENST00000686984.1 | protein_coding | 3/12 | 654/2799 | 642/2382 | 214/793 | chr11 | TogoVar | ||
VWDE_chr7_12325885_12408865 | 12351642 | T | TA | frameshift_variant | HIGH | HG00099.hp1 HG00423.hp1 HG00558.hp1 others(69): Show |
a0002a0008a0011others(7): Show | a0002c0002a0002c0046a0002c0047others(9): Show | a0002c0002t0004a0002c0046t0004a0002c0047t0007others(11): Show | a0002c0002t0004g0001a0002c0002t0004g0002a0002c0002t0004g0003others(43): Show | 72 | 374 | 0.1925 | 1 | c.381 others(5): Show |
p.Lys others(6): Show |
VWDE | ENSG00000146530.15 | transcript | ENST00000275358.8 | protein_coding | 19/29 | 3965/5220 | 3816/4773 | 1272/1590 | chr7 | TogoVar | ||
VWDE_chr7_12325885_12408865 | 12375099 | G | A | stop_gained | HIGH | HG00099.hp1 HG00423.hp1 HG00558.hp1 others(70): Show |
a0002a0008a0011others(3): Show | a0002c0002a0002c0043a0002c0044others(12): Show | a0002c0002t0004a0002c0043t0005a0002c0044t0014others(12): Show | a0002c0002t0004g0001a0002c0002t0004g0002a0002c0002t0004g0003others(44): Show | 73 | 374 | 0.1952 | 0 | c.115 others(4): Show |
p.Arg others(4): Show |
VWDE | ENSG00000146530.15 | transcript | ENST00000275358.8 | protein_coding | 8/29 | 1302/5220 | 1153/4773 | 385/1590 | chr7 | TogoVar | ||
WDR13_chrX_48592492_48613869 | 48600456 | T | TC | frameshift_variant | HIGH | NA19072.hp1 | a0008 | a0008c0007 | a0008c0007t0109 | a0008c0007t0109g0074 | 1 | 310 | 0.0032 | 1 | c.663 others(4): Show |
p.Asp others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 6/10 | 826/5457 | 664/1458 | 222/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48600471 | T | TC | frameshift_variant | HIGH | NA19072.hp1 | a0008 | a0008c0007 | a0008c0007t0109 | a0008c0007t0109g0074 | 1 | 310 | 0.0032 | 1 | c.679 others(4): Show |
p.Leu others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 6/10 | 842/5457 | 680/1458 | 227/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48600614 | C | CA | frameshift_variant | HIGH | NA19072.hp1 | a0008 | a0008c0007 | a0008c0007t0109 | a0008c0007t0109g0074 | 1 | 310 | 0.0032 | 1 | c.821 others(4): Show |
p.Asn others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 6/10 | 984/5457 | 822/1458 | 274/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48601806 | T | TG | frameshift_variant | HIGH | NA19072.hp1 | a0008 | a0008c0007 | a0008c0007t0109 | a0008c0007t0109g0074 | 1 | 310 | 0.0032 | 1 | c.855 others(4): Show |
p.His others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 7/10 | 1018/5457 | 856/1458 | 286/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48601834 | GA | G | frameshift_variant | HIGH | NA19072.hp1 | a0008 | a0008c0007 | a0008c0007t0109 | a0008c0007t0109g0074 | 1 | 310 | 0.0032 | -1 | c.885 others(4): Show |
p.Val others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 7/10 | 1047/5457 | 885/1458 | 295/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48601879 | T | TC | frameshift_variant | HIGH | NA19072.hp1 | a0008 | a0008c0007 | a0008c0007t0109 | a0008c0007t0109g0074 | 1 | 310 | 0.0032 | 1 | c.928 others(4): Show |
p.Leu others(5): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 7/10 | 1091/5457 | 929/1458 | 310/485 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
WDR13_chrX_48592492_48613869 | 48602061 | G | GC | splice_acceptor_variant others(1): Show |
HIGH | NA19072.hp1 | a0008 | a0008c0007 | a0008c0007t0109 | a0008c0007t0109g0074 | 1 | 310 | 0.0032 | 1 | c.101 others(7): Show |
WDR13 | ENSG00000101940.18 | transcript | ENST00000376729.10 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
XAGE2_chrX_52364021_52380680 | 52375579 | AT | A | frameshift_variant | HIGH | NA19072.hp1 | a0000 | a0000c0003 | a0000c0003t0001 | a0000c0003t0001g0017 | 1 | 253 | 0.0040 | -1 | c.325 others(4): Show |
p.Ser others(5): Show |
XAGE2 | ENSG00000155622.7 | transcript | ENST00000286049.3 | protein_coding | 5/5 | 527/627 | 325/336 | 109/111 | chrX | TogoVar | ||
ZNF117_chr7_64966772_64996036 | 64978289 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(376): Show |
a0001a0002a0007others(4): Show | a0001c0001a0001c0007a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(54): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0008others(233): Show | 379 | 444 | 0.8536 | 0 | c.128 others(4): Show |
p.Arg others(4): Show |
ZNF117 | ENSG00000152926.16 | transcript | ENST00000282869.11 | protein_coding | 4/4 | 2567/9084 | 1282/1452 | 428/483 | chr7 | TogoVar | ||
ZNF528_chr19_52392849_52423401 | 52401662 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(225): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0010a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(112): Show | 228 | 476 | 0.4790 | 1 | c.-13 others(7): Show |
ZNF528 | ENSG00000167555.14 | transcript | ENST00000360465.8 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
ZNF567_chr19_36682612_36726336 | 36689395 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(155): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0009a0002c0006others(2): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0008others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(101): Show | 158 | 386 | 0.4093 | 0 | c.-16 others(6): Show |
ZNF567 | ENSG00000189042.14 | transcript | ENST00000682579.1 | protein_coding | 1/5 | chr19 | TogoVar | ||||||
ZNF628_chr19_55471617_55489487 | 55482009 | G | GC | frameshift_variant | HIGH | HG00423.hp1 HG00597.hp2 HG00642.hp1 others(29): Show |
a0004a0008a0033others(3): Show | a0004c0015a0004c0017a0004c0024others(20): Show | a0004c0015t0001a0004c0017t0001a0004c0024t0001others(20): Show | a0004c0015t0001g0001a0004c0015t0001g0007a0004c0015t0001g0017others(28): Show | 32 | 422 | 0.0758 | 1 | c.821 others(4): Show |
p.Pro others(5): Show |
ZNF628 | ENSG00000197483.11 | transcript | ENST00000598519.2 | protein_coding | 3/3 | 1090/3562 | 822/3180 | 274/1059 | INFO_REALIGN_3_PRIME | chr19 | TogoVar |