regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PLXNA3_chrX_154453281_154482779 | 154461517 | G | GC | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 1 | c.101 others(5): Show |
p.Leu others(5): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 3/33 | 1191/10885 | 1016/5616 | 339/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNA3_chrX_154453281_154482779 | 154463434 | T | TCC | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 2 | c.136 others(11): Show |
p.Val others(5): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 5/33 | 1541/10885 | 1366/5616 | 456/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNA3_chrX_154453281_154482779 | 154463670 | T | TC | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 1 | c.152 others(10): Show |
p.Trp others(5): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 6/33 | 1703/10885 | 1528/5616 | 510/1871 | chrX | TogoVar | ||
PLXNA3_chrX_154453281_154482779 | 154464073 | A | AG | splice_donor_variant others(1): Show |
HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 1 | c.167 others(7): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 7/32 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
PLXNA3_chrX_154453281_154482779 | 154464212 | T | TC | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 1 | c.172 others(5): Show |
p.Glu others(5): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 8/33 | 1904/10885 | 1729/5616 | 577/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNA3_chrX_154453281_154482779 | 154464224 | C | CG | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 1 | c.174 others(5): Show |
p.Glu others(5): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 8/33 | 1917/10885 | 1742/5616 | 581/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNA3_chrX_154453281_154482779 | 154464256 | G | GA | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 1 | c.177 others(5): Show |
p.Leu others(5): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 8/33 | 1949/10885 | 1774/5616 | 592/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNA3_chrX_154453281_154482779 | 154464277 | TC | T | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | -1 | c.179 others(5): Show |
p.Leu others(5): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 8/33 | 1970/10885 | 1795/5616 | 599/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PLXNA3_chrX_154453281_154482779 | 154466751 | A | AC | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0013 | a0010c0013t0080 | a0010c0013t0080g0092 | 1 | 262 | 0.0038 | 1 | c.306 others(5): Show |
p.Thr others(6): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 17/33 | 3245/10885 | 3070/5616 | 1024/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
POMZP3_chr7_76604986_76632279 | 76611468 | CA | C | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(209): Show |
a0000 | a0000c0002a0000c0004a0000c0005others(6): Show | a0000c0002t0002a0000c0002t0003a0000c0002t0004others(25): Show | a0000c0002t0002g0003a0000c0002t0002g0007a0000c0002t0002g0014others(183): Show | 212 | 423 | 0.5012 | -1 | c.560 others(4): Show |
p.Leu others(5): Show |
POMZP3 | ENSG00000146707.15 | transcript | ENST00000310842.9 | protein_coding | 6/7 | 1283/1528 | 560/564 | 187/187 | chr7 | TogoVar | ||
POU3F3_chr2_104849115_104863574 | 104855606 | C | CG | frameshift_variant | HIGH | HG00597.hp1 HG00621.hp1 HG01981.hp2 others(17): Show |
a0000 | a0000c0003a0000c0004 | a0000c0003t0001a0000c0003t0003a0000c0003t0004others(3): Show | a0000c0003t0001g0000a0000c0003t0003g0000a0000c0003t0004g0000others(3): Show | 20 | 406 | 0.0493 | 1 | c.101 others(4): Show |
p.Gly others(4): Show |
POU3F3 | ENSG00000198914.5 | transcript | ENST00000361360.4 | protein_coding | 1/1 | 1498/4460 | 102/1503 | 34/500 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
PRAMEF33_chr1_13298539_13313907 | 13307108 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(242): Show |
a0001a0003a0022others(2): Show | a0001c0001a0001c0003a0001c0005others(31): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0002others(36): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0034others(62): Show | 245 | 417 | 0.5875 | 0 | c.758 others(3): Show |
p.Trp others(4): Show |
PRAMEF33 | ENSG00000237700.2 | transcript | ENST00000437300.2 | protein_coding | 3/4 | 831/1518 | 758/1425 | 253/474 | chr1 | TogoVar | ||
PRB2_chr12_11386540_11400567 | 11393186 | G | A | stop_gained | HIGH | HG00438.hp1 HG02280.hp1 NA19003.hp1 others(2): Show |
a0007 | a0007c0009a0007c0021 | a0007c0009t0002a0007c0021t0002 | a0007c0009t0002g0028a0007c0009t0002g0047a0007c0009t0002g0087others(1): Show | 5 | 410 | 0.0122 | 0 | c.892 others(3): Show |
p.Arg others(4): Show |
PRB2 | ENSG00000121335.12 | transcript | ENST00000389362.6 | protein_coding | 3/4 | 930/1431 | 892/1251 | 298/416 | chr12 | TogoVar | ||
PRICKLE3_chrX_49169802_49191373 | 49175757 | G | GA | frameshift_variant | HIGH | NA19083.hp1 | a0005 | a0005c0011 | a0005c0011t0007 | a0005c0011t0007g0112 | 1 | 273 | 0.0037 | 1 | c.176 others(5): Show |
p.Asn others(5): Show |
PRICKLE3 | ENSG00000012211.13 | transcript | ENST00000599218.6 | protein_coding | 9/9 | 1839/2795 | 1763/1848 | 588/615 | chrX | TogoVar | ||
PRICKLE3_chrX_49169802_49191373 | 49175983 | T | TG | frameshift_variant | HIGH | NA19083.hp1 | a0005 | a0005c0011 | a0005c0011t0007 | a0005c0011t0007g0112 | 1 | 273 | 0.0037 | 1 | c.153 others(5): Show |
p.His others(5): Show |
PRICKLE3 | ENSG00000012211.13 | transcript | ENST00000599218.6 | protein_coding | 9/9 | 1613/2795 | 1537/1848 | 513/615 | chrX | TogoVar | ||
PRICKLE3_chrX_49169802_49191373 | 49176039 | C | CG | frameshift_variant | HIGH | NA19083.hp1 | a0005 | a0005c0011 | a0005c0011t0007 | a0005c0011t0007g0112 | 1 | 273 | 0.0037 | 1 | c.148 others(5): Show |
p.Ala others(5): Show |
PRICKLE3 | ENSG00000012211.13 | transcript | ENST00000599218.6 | protein_coding | 9/9 | 1557/2795 | 1481/1848 | 494/615 | chrX | TogoVar | ||
PRICKLE3_chrX_49169802_49191373 | 49176084 | A | AG | frameshift_variant | HIGH | NA19083.hp1 | a0005 | a0005c0011 | a0005c0011t0007 | a0005c0011t0007g0112 | 1 | 273 | 0.0037 | 1 | c.143 others(5): Show |
p.Leu others(5): Show |
PRICKLE3 | ENSG00000012211.13 | transcript | ENST00000599218.6 | protein_coding | 9/9 | 1512/2795 | 1436/1848 | 479/615 | chrX | TogoVar | ||
PRICKLE3_chrX_49169802_49191373 | 49176934 | G | GT | frameshift_variant | HIGH | NA19083.hp1 | a0005 | a0005c0011 | a0005c0011t0007 | a0005c0011t0007g0112 | 1 | 273 | 0.0037 | 1 | c.122 others(10): Show |
p.Thr others(5): Show |
PRICKLE3 | ENSG00000012211.13 | transcript | ENST00000599218.6 | protein_coding | 8/9 | 1299/2795 | 1223/1848 | 408/615 | chrX | TogoVar | ||
PRICKLE3_chrX_49169802_49191373 | 49176947 | G | GC | frameshift_variant | HIGH | NA19083.hp1 | a0005 | a0005c0011 | a0005c0011t0007 | a0005c0011t0007g0112 | 1 | 273 | 0.0037 | 1 | c.121 others(5): Show |
p.Ala others(5): Show |
PRICKLE3 | ENSG00000012211.13 | transcript | ENST00000599218.6 | protein_coding | 8/9 | 1286/2795 | 1210/1848 | 404/615 | chrX | TogoVar | ||
PRICKLE3_chrX_49169802_49191373 | 49176988 | T | TG | frameshift_variant | HIGH | NA19083.hp1 | a0005 | a0005c0011 | a0005c0011t0007 | a0005c0011t0007g0112 | 1 | 273 | 0.0037 | 1 | c.116 others(5): Show |
p.Leu others(5): Show |
PRICKLE3 | ENSG00000012211.13 | transcript | ENST00000599218.6 | protein_coding | 8/9 | 1245/2795 | 1169/1848 | 390/615 | chrX | TogoVar | ||
PRODH_chr22_18907781_18941293 | 18925164 | C | T | stop_gained | HIGH | HG00741.hp1 HG01069.hp2 HG01071.hp2 others(16): Show |
a0007a0012a0036others(3): Show | a0007c0010a0007c0039a0012c0018others(5): Show | a0007c0010t0001a0007c0039t0001a0012c0018t0001others(5): Show | a0007c0010t0001g0008a0007c0010t0001g0198a0007c0039t0001g0039others(10): Show | 19 | 409 | 0.0465 | 0 | c.554 others(3): Show |
p.Trp others(4): Show |
PRODH | ENSG00000100033.17 | transcript | ENST00000357068.11 | protein_coding | 4/14 | 560/2203 | 554/1803 | 185/600 | chr22 | TogoVar | ||
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PSG7_chr19_42919132_42942207 | 42935542 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(373): Show |
a0001a0005a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(319): Show | 376 | 416 | 0.9039 | 0 | c.292 others(3): Show |
p.Arg others(3): Show |
PSG7 | ENSG00000221878.13 | transcript | ENST00000406070.7 | protein_coding | 2/6 | 423/2067 | 292/1260 | 98/419 | chr19 | TogoVar | ||
PTTG1IP2_chr7_90464639_90518397 | 90487326 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00423.hp2 HG00438.hp2 others(69): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0235others(58): Show | 72 | 384 | 0.1875 | 0 | c.193 others(5): Show |
PTTG1IP2 | ENSG00000251154.2 | transcript | ENST00000509356.2 | protein_coding | 2/6 | chr7 | TogoVar | ||||||
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
RBMXL2_chr11_7083998_7096148 | 7089456 | C | CG | frameshift_variant | HIGH | HG00621.hp1 HG00642.hp2 HG01099.hp2 others(39): Show |
a0003a0005a0010others(1): Show | a0003c0004a0003c0005a0003c0011others(4): Show | a0003c0004t0001a0003c0004t0002a0003c0004t0003others(9): Show | a0003c0004t0001g0000a0003c0004t0002g0000a0003c0004t0003g0000others(9): Show | 42 | 460 | 0.0913 | 1 | c.341 others(4): Show |
p.Gly others(5): Show |
RBMXL2 | ENSG00000170748.7 | transcript | ENST00000306904.7 | protein_coding | 1/1 | 465/2151 | 342/1179 | 114/392 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
RBMX_chrX_136868461_136885725 | 136876609 | TC | T | frameshift_variant | HIGH | NA19083.hp1 | a0004 | a0004c0005 | a0004c0005t0002 | a0004c0005t0002g0025 | 1 | 308 | 0.0033 | -1 | c.434 others(4): Show |
p.Gly others(5): Show |
RBMX | ENSG00000147274.14 | transcript | ENST00000320676.11 | protein_coding | 5/9 | 589/2012 | 434/1176 | 145/391 | chrX | TogoVar | ||
REN_chr1_204149819_204171337 | 204156794 | T | TTCCTAAA others(12): Show |
frameshift_variant others(2): Show |
HIGH | NA19083.hp2 | a0005 | a0005c0011 | a0005c0011t0001 | a0005c0011t0001g0053 | 1 | 432 | 0.0023 | 19 | c.699 others(29): Show |
p.Asn others(5): Show |
REN | ENSG00000143839.15 | transcript | ENST00000272190.9 | protein_coding | 7/10 | 744/1462 | 700/1221 | 234/406 | chr1 | TogoVar | ||
RFX8_chr2_101392359_101480112 | 101422474 | T | G | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00544.hp2 HG00558.hp1 others(42): Show |
a0001a0002a0004others(4): Show | a0001c0001a0002c0002a0004c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(7): Show | a0001c0001t0001g0002a0001c0001t0001g0013a0001c0001t0001g0109others(36): Show | 45 | 352 | 0.1278 | 0 | c.73- others(4): Show |
RFX8 | ENSG00000196460.14 | transcript | ENST00000428343.6 | protein_coding | 2/11 | chr2 | TogoVar | ||||||
RHBG_chr1_156364211_156390219 | 156384556 | T | TC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(229): Show |
a0002a0003a0005others(9): Show | a0002c0002a0002c0008a0003c0004others(16): Show | a0002c0002t0001a0002c0008t0001a0003c0004t0001others(16): Show | a0002c0002t0001g0003a0002c0002t0001g0011a0002c0002t0001g0014others(130): Show | 232 | 438 | 0.5297 | 1 | c.127 others(5): Show |
p.Asp others(5): Show |
RHBG | ENSG00000132677.13 | transcript | ENST00000537040.6 | protein_coding | 9/10 | 1311/1790 | 1272/1377 | 424/458 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
RNF148_chr7_122696668_122707922 | 122702612 | G | A | stop_gained | HIGH | NA19083.hp1 | a0004 | a0004c0015 | a0004c0015t0001 | a0004c0015t0001g0000 | 1 | 432 | 0.0023 | 0 | c.139 others(3): Show |
p.Gln others(3): Show |
RNF148 | ENSG00000235631.2 | transcript | ENST00000434824.2 | protein_coding | 1/1 | 311/1255 | 139/918 | 47/305 | chr7 | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TA | splice_acceptor_variant others(1): Show |
HIGH | HG00438.hp1 HG00609.hp1 HG00673.hp2 others(50): Show |
a0001a0002a0008 | a0001c0013a0002c0003a0008c0007 | a0001c0013t0002a0002c0003t0003a0008c0007t0003 | a0001c0013t0002g0012a0002c0003t0003g0021a0002c0003t0003g0022others(50): Show | 53 | 386 | 0.1373 | 1 | c.100 others(7): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SBK2_chr19_55523611_55542133 | 55530084 | C | CG | frameshift_variant | HIGH | HG00408.hp1 HG00408.hp2 HG00597.hp1 others(32): Show |
a0000 | a0000c0003a0000c0007a0000c0017others(1): Show | a0000c0003t0001a0000c0003t0002a0000c0003t0003others(14): Show | a0000c0003t0001g0172a0000c0003t0001g0173a0000c0003t0001g0196others(32): Show | 35 | 434 | 0.0807 | 1 | c.695 others(4): Show |
p.Pro others(5): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 4/4 | 777/2251 | 695/1047 | 232/348 | chr19 | TogoVar | ||
SCAPER_chr15_76342904_76910340 | 76883817 | T | C | start_lost | HIGH | HG00140.hp2 HG00544.hp2 HG00597.hp1 others(114): Show |
a0002a0003a0005others(4): Show | a0002c0002a0002c0022a0003c0003others(5): Show | a0002c0002t0002a0002c0022t0002a0003c0003t0002others(9): Show | a0002c0002t0002g0190a0002c0002t0002g0194a0002c0002t0002g0219others(114): Show | 117 | 312 | 0.3750 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 2/32 | 102/5033 | 1/4203 | 1/1400 | chr15 | TogoVar | ||
SCN1A_chr2_165980813_166133020 | 166038034 | GACGAGGG others(7): Show |
G | frameshift_variant | HIGH | NA19083.hp2 | a0005 | a0005c0025 | a0005c0025t0011 | a0005c0025t0011g0254 | 1 | 356 | 0.0028 | -14 | c.267 others(23): Show |
p.Asn others(5): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 18/29 | 3165/11940 | 2674/6030 | 892/2009 | chr2 | TogoVar | ||
SCRG1_chr4_173379701_173404116 | 173391227 | TTCCCATC others(4): Show |
T | frameshift_variant | HIGH | NA19083.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0075 | 1 | 380 | 0.0026 | -11 | c.177 others(18): Show |
p.Phe others(4): Show |
SCRG1 | ENSG00000164106.8 | transcript | ENST00000296506.8 | protein_coding | 2/3 | 250/4000 | 177/297 | 59/98 | chr4 | TogoVar | ||
SETBP1_chr18_44675888_45073510 | 45063530 | A | AC | frameshift_variant | HIGH | HG01496.hp2 HG01978.hp2 HG02004.hp2 others(5): Show |
a0005a0006a0007 | a0005c0006a0006c0007a0007c0008 | a0005c0006t0001a0005c0006t0003a0005c0006t0022others(3): Show | a0005c0006t0001g0007a0005c0006t0001g0075a0005c0006t0003g0022others(5): Show | 8 | 140 | 0.0571 | 1 | c.462 others(5): Show |
p.Leu others(6): Show |
SETBP1 | ENSG00000152217.20 | transcript | ENST00000649279.2 | protein_coding | 6/6 | 4935/9909 | 4629/4791 | 1543/1596 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |
SLC16A2_chrX_74416493_74538916 | 74422037 | G | GA | frameshift_variant | HIGH | HG04228.hp1 NA19083.hp1 |
a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0158a0003c0004t0001g0216 | 2 | 235 | 0.0085 | 1 | c.407 others(4): Show |
p.Asn others(5): Show |
SLC16A2 | ENSG00000147100.11 | transcript | ENST00000587091.6 | protein_coding | 1/6 | 553/4128 | 408/1620 | 136/539 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63143377 | C | T | splice_donor_variant others(1): Show |
HIGH | HG00558.hp2 HG00597.hp2 HG00642.hp1 others(83): Show |
a0003a0007a0013others(2): Show | a0003c0003a0003c0009a0007c0007others(4): Show | a0003c0003t0002a0003c0003t0003a0003c0003t0005others(7): Show | a0003c0003t0002g0001a0003c0003t0002g0002a0003c0003t0002g0022others(80): Show | 86 | 366 | 0.2350 | 0 | c.402 others(5): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 1/9 | chr11 | TogoVar | ||||||
SLC22A31_chr16_89190761_89205537 | 89196258 | GCCTGGCC others(74): Show |
G | frameshift_variant others(3): Show |
HIGH | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(170): Show |
a0002a0005a0006others(4): Show | a0002c0002a0002c0004a0002c0007others(9): Show | a0002c0002t0001a0002c0002t0002a0002c0004t0001others(10): Show | a0002c0002t0001g0002a0002c0002t0001g0010a0002c0002t0001g0014others(30): Show | 173 | 428 | 0.4042 | -81 | c.103 others(93): Show |
p.Arg others(5): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 9/9 | 1117/1615 | 1035/1341 | 345/446 | chr16 | TogoVar | ||
SLC22A31_chr16_89190761_89205537 | 89198106 | GGGGCCCC others(11): Show |
G | splice_donor_variant others(3): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00438.hp2 others(28): Show |
a0004a0017 | a0004c0006a0004c0009a0017c0022 | a0004c0006t0001a0004c0009t0001a0017c0022t0001 | a0004c0006t0001g0006a0004c0006t0001g0029a0004c0009t0001g0008others(1): Show | 31 | 428 | 0.0724 | -18 | c.920 others(28): Show |
p.Gln others(19): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 7/9 | 920/1341 | 307/446 | chr16 | TogoVar | |||
SLFN13_chr17_35430096_35453766 | 35445639 | G | T | stop_gained | HIGH | HG00099.hp1 HG00140.hp2 HG00408.hp1 others(56): Show |
a0002 | a0002c0002a0002c0014a0002c0023others(6): Show | a0002c0002t0003a0002c0002t0004a0002c0002t0011others(17): Show | a0002c0002t0003g0003a0002c0002t0003g0022a0002c0002t0003g0060others(25): Show | 59 | 456 | 0.1294 | 0 | c.42C others(2): Show |
p.Tyr others(3): Show |
SLFN13 | ENSG00000154760.14 | transcript | ENST00000285013.11 | protein_coding | 3/6 | 247/8398 | 42/2694 | 14/897 | chr17 | TogoVar | ||
SNX27_chr1_151607050_151704080 | 151692406 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(82): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(48): Show | a0001c0001t0001g0113a0001c0001t0001g0117a0001c0001t0001g0118others(82): Show | 85 | 366 | 0.2322 | 1 | c.124 others(7): Show |
SNX27 | ENSG00000143376.14 | transcript | ENST00000458013.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SRPK3_chrX_153776041_153790730 | 153783106 | T | TC | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0015 | a0010c0015t0002 | a0010c0015t0002g0018 | 1 | 307 | 0.0033 | 1 | c.739 others(4): Show |
p.Arg others(5): Show |
SRPK3 | ENSG00000184343.11 | transcript | ENST00000370101.8 | protein_coding | 7/15 | 786/1960 | 740/1704 | 247/567 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SRPK3_chrX_153776041_153790730 | 153784088 | G | GC | frameshift_variant | HIGH | NA19083.hp1 | a0010 | a0010c0015 | a0010c0015t0002 | a0010c0015t0002g0018 | 1 | 307 | 0.0033 | 1 | c.102 others(5): Show |
p.Arg others(5): Show |
SRPK3 | ENSG00000184343.11 | transcript | ENST00000370101.8 | protein_coding | 10/15 | 1071/1960 | 1025/1704 | 342/567 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SRPK3_chrX_153776041_153790730 | 153784823 | G | GC | frameshift_variant | HIGH | HG01192.hp1 NA18997.hp1 NA19083.hp1 |
a0003a0010 | a0003c0020a0003c0022a0010c0015 | a0003c0020t0002a0003c0022t0001a0010c0015t0002 | a0003c0020t0002g0002a0003c0022t0001g0005a0010c0015t0002g0018 | 3 | 307 | 0.0098 | 1 | c.132 others(5): Show |
p.Ala others(5): Show |
SRPK3 | ENSG00000184343.11 | transcript | ENST00000370101.8 | protein_coding | 12/15 | 1375/1960 | 1329/1704 | 443/567 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
STAG2_chrX_123956706_124107656 | 124061743 | C | CTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp1 HG00438.hp1 HG00597.hp1 others(37): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(1): Show | a0001c0001t0001g0043a0001c0001t0001g0052a0001c0001t0001g0071others(37): Show | 40 | 276 | 0.1449 | 3 | c.153 others(16): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
STPG4_chr2_47081991_47160308 | 47155227 | C | CG | frameshift_variant | HIGH | HG00673.hp2 HG00735.hp1 HG01109.hp2 others(8): Show |
a0004a0011 | a0004c0004a0004c0005a0011c0009 | a0004c0004t0001a0004c0005t0001a0011c0009t0001 | a0004c0004t0001g0007a0004c0004t0001g0008a0004c0004t0001g0009others(8): Show | 11 | 352 | 0.0313 | 1 | c.24d others(3): Show |
p.Ala others(3): Show |
STPG4 | ENSG00000239605.11 | transcript | ENST00000445927.7 | protein_coding | 1/7 | 81/821 | 24/747 | 8/248 | chr2 | TogoVar | ||
TAP2_chr6_32820415_32843739 | 32828908 | A | G | stop_lost | HIGH | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(156): Show |
a0000 | a0000c0002a0000c0006a0000c0008others(19): Show | a0000c0002t0001a0000c0002t0003a0000c0002t0025others(28): Show | a0000c0002t0001g0001a0000c0002t0001g0037a0000c0002t0001g0040others(70): Show | 159 | 485 | 0.3278 | 0 | c.205 others(4): Show |
p.Ter others(11): Show |
TAP2 | ENSG00000204267.19 | transcript | ENST00000374897.4 | protein_coding | 12/12 | 2150/5643 | 2059/2061 | 687/686 | chr6 | TogoVar |