Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
A2M_chr12_9062708_9120919	9118248	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18944.hp1 NA18965.hp2 NA18944.hp1 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0104 a0001c0001t0002g0106 a0001c0001t0002g0104 a0001c0001t0002g0106	2	332	0.0060	0	c.-23 others(5): Show c.-2399C>G	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	2329	chr12	TogoVar
A2M_chr12_9062708_9120919	9118269	GT GT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 HG02976.hp1 HG03486.hp1 others(1): Show HG02965.hp2 HG02976.hp1 HG03486.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0001c0001t0002 a0002c0002t0002	a0001c0001t0002g0046 a0001c0001t0002g0070 a0001c0001t0002g0071 others(1): Show a0001c0001t0002g0046 a0001c0001t0002g0070 a0001c0001t0002g0071 a0002c0002t0002g0016	4	332	0.0121	-1	c.-24 others(6): Show c.-2421delA	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	2351	chr12	TogoVar
A2M_chr12_9062708_9120919	9118301	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG01081.hp1 HG01192.hp2 others(1): Show HG00642.hp1 HG01081.hp1 HG01192.hp2 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0021 a0001c0001t0001g0150 a0001c0001t0001g0151	4	332	0.0121	0	c.-24 others(5): Show c.-2452C>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	2382	chr12	TogoVar
A2M_chr12_9062708_9120919	9118351	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0016 a0002c0002t0002g0016	1	332	0.0030	0	c.-25 others(5): Show c.-2502T>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	2432	chr12	TogoVar
A2M_chr12_9062708_9120919	9118393	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02280.hp1 HG02486.hp2 others(8): Show HG02258.hp1 HG02280.hp1 HG02486.hp2 HG02922.hp2 HG02970.hp1 HG03041.hp2 HG03225.hp1 HG03471.hp2 NA18906.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0001c0001t0002 a0002c0002t0002	a0001c0001t0002g0005 a0001c0001t0002g0088 a0001c0001t0002g0089 others(6): Show a0001c0001t0002g0005 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0002c0002t0002g0016 a0002c0002t0002g0087	11	332	0.0331	0	c.-25 others(5): Show c.-2544G>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	2474	chr12	TogoVar
A2M_chr12_9062708_9120919	9118476	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0015 a0015	a0015c0020 a0015c0020	a0015c0020t0002 a0015c0020t0002	a0015c0020t0002g0080 a0015c0020t0002g0080	1	332	0.0030	0	c.-26 others(5): Show c.-2627G>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	2557	chr12	TogoVar
A2M_chr12_9062708_9120919	9118738	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02723.hp2 HG02622.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0143 a0001c0001t0002g0144	2	332	0.0060	0	c.-28 others(5): Show c.-2889C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	2819	chr12	TogoVar
A2M_chr12_9062708_9120919	9119040	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0038 a0002c0002t0002g0038	1	332	0.0030	0	c.-31 others(5): Show c.-3191C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3121	chr12	TogoVar
A2M_chr12_9062708_9120919	9119212	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp1 HG02280.hp1 HG02486.hp2 others(7): Show HG02258.hp1 HG02280.hp1 HG02486.hp2 HG02922.hp2 HG02970.hp1 HG03225.hp1 HG03471.hp2 NA18906.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0001c0001t0002 a0002c0002t0002	a0001c0001t0002g0005 a0001c0001t0002g0088 a0001c0001t0002g0089 others(6): Show a0001c0001t0002g0005 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0002c0002t0002g0016 a0002c0002t0002g0087	10	332	0.0301	0	c.-33 others(5): Show c.-3363C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3293	chr12	TogoVar
A2M_chr12_9062708_9120919	9119239	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG00738.hp1 HG01070.hp2 others(53): Show HG00639.hp1 HG00738.hp1 HG01070.hp2 HG01071.hp2 HG01109.hp1 HG01243.hp2 HG01256.hp2 HG01358.hp1 HG01515.hp1 HG01517.hp1 HG01952.hp1 HG02056.hp1 HG02145.hp1 HG02145.hp2 HG02258.hp2 HG02300.hp2 HG02698.hp1 HG02738.hp2 HG02886.hp2 HG02965.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp2 HG03927.hp1 HG03942.hp2 HG04184.hp1 HG04199.hp2 HG04228.hp2 NA18522.hp1 NA18940.hp1 NA18953.hp2 NA18957.hp1 NA18970.hp1 NA18972.hp2 NA18974.hp1 NA18979.hp2 NA18982.hp2 NA18993.hp1 NA18995.hp1 NA18999.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp2 NA19030.hp1 NA19056.hp1 NA19066.hp1 NA19240.hp2 NA20300.hp2	a0001 a0012 a0016 a0001 a0012 a0016	a0001c0001 a0001c0003 a0001c0009 others(3): Show a0001c0001 a0001c0003 a0001c0009 a0001c0021 a0012c0014 a0016c0013	a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 a0001c0009t0002 a0001c0021t0002 a0012c0014t0002 a0016c0013t0002	a0001c0001t0001g0034 a0001c0001t0001g0262 a0001c0001t0001g0265 others(44): Show a0001c0001t0001g0034 a0001c0001t0001g0262 a0001c0001t0001g0265 a0001c0001t0001g0273 a0001c0001t0002g0002 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0078 a0001c0001t0002g0081 a0001c0001t0002g0084 a0001c0003t0002g0003 a0001c0003t0002g0014 a0001c0003t0002g0048 a0001c0003t0002g0073 a0001c0003t0002g0074 a0001c0003t0002g0075 a0001c0003t0002g0077 a0001c0009t0002g0082 a0001c0009t0002g0083 a0001c0021t0002g0076 a0012c0014t0002g0079 a0016c0013t0002g0049	56	332	0.1687	0	c.-33 others(5): Show c.-3390G>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3320	chr12	TogoVar
A2M_chr12_9062708_9120919	9119418	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0002 a0001c0015t0002	a0001c0015t0002g0040 a0001c0015t0002g0040	1	332	0.0030	0	c.-35 others(5): Show c.-3569A>G	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3499	chr12	TogoVar
A2M_chr12_9062708_9120919	9119473	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0192 a0001c0001t0001g0192	1	332	0.0030	0	c.-36 others(5): Show c.-3624C>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3554	chr12	TogoVar
A2M_chr12_9062708_9120919	9119575	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0118 a0002c0002t0002g0118	1	332	0.0030	0	c.-37 others(5): Show c.-3726G>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3656	chr12	TogoVar
A2M_chr12_9062708_9120919	9119582	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG02630.hp2 HG02723.hp1 others(3): Show HG01884.hp2 HG02630.hp2 HG02723.hp1 HG03195.hp1 HG03540.hp1 NA20129.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0025 a0001c0001 a0008c0025	a0001c0001t0001 a0008c0025t0001 a0001c0001t0001 a0008c0025t0001	a0001c0001t0001g0233 a0001c0001t0001g0239 a0001c0001t0001g0240 others(3): Show a0001c0001t0001g0233 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0008c0025t0001g0276	6	332	0.0181	0	c.-37 others(5): Show c.-3733C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3663	chr12	TogoVar
A2M_chr12_9062708_9120919	9119643	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0016 a0002c0002t0002g0016	1	332	0.0030	0	c.-37 others(5): Show c.-3794A>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3724	chr12	TogoVar
A2M_chr12_9062708_9120919	9119802	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01993.hp2 NA19043.hp1 HG01993.hp2 NA19043.hp1	a0002 a0013 a0002 a0013	a0002c0002 a0013c0016 a0002c0002 a0013c0016	a0002c0002t0002 a0013c0016t0002 a0002c0002t0002 a0013c0016t0002	a0002c0002t0002g0038 a0013c0016t0002g0139 a0002c0002t0002g0038 a0013c0016t0002g0139	2	332	0.0060	0	c.-39 others(5): Show c.-3953G>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3883	chr12	TogoVar
A2M_chr12_9062708_9120919	9119816	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG03540.hp2 HG02145.hp2 HG03540.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0082 a0001c0009t0002g0083 a0001c0009t0002g0082 a0001c0009t0002g0083	2	332	0.0060	0	c.-39 others(5): Show c.-3967A>C	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	3897	chr12	TogoVar
A2M_chr12_9062708_9120919	9120066	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp2 HG03209.hp1 HG03453.hp1 HG02886.hp2 HG03209.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062	3	332	0.0090	0	c.-42 others(5): Show c.-4217T>C	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4147	chr12	TogoVar
A2M_chr12_9062708_9120919	9120101	TCCTTACT others(4): Show TCCTTACTATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0149 a0001c0001t0001g0149	1	332	0.0030	-11	c.-42 others(22): Show c.-4263_-4253delGTATAGTAAGG	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4183	chr12	TogoVar
A2M_chr12_9062708_9120919	9120191	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0015 a0015	a0015c0020 a0015c0020	a0015c0020t0002 a0015c0020t0002	a0015c0020t0002g0080 a0015c0020t0002g0080	1	332	0.0030	0	c.-43 others(5): Show c.-4342T>C	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4272	chr12	TogoVar
A2M_chr12_9062708_9120919	9120290	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02647.hp1 HG02809.hp1 HG03130.hp2 others(3): Show HG02647.hp1 HG02809.hp1 HG03130.hp2 HG03540.hp2 NA18906.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0002 a0001c0001t0003 a0001c0009t0002 a0001c0001t0002 a0001c0001t0003 a0001c0009t0002	a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 others(3): Show a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0003g0037 a0001c0009t0002g0082	6	332	0.0181	0	c.-44 others(5): Show c.-4441A>G	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4371	chr12	TogoVar
A2M_chr12_9062708_9120919	9120292	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp2 HG02723.hp2 HG02622.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0143 a0001c0001t0002g0144	2	332	0.0060	0	c.-44 others(5): Show c.-4443G>C	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4373	chr12	TogoVar
A2M_chr12_9062708_9120919	9120351	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0013 a0013	a0013c0016 a0013c0016	a0013c0016t0002 a0013c0016t0002	a0013c0016t0002g0139 a0013c0016t0002g0139	1	332	0.0030	0	c.-45 others(5): Show c.-4502G>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4432	chr12	TogoVar
A2M_chr12_9062708_9120919	9120479	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp2 HG02622.hp1 HG02717.hp1 others(4): Show HG02559.hp2 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG03041.hp1 HG06807.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0015 a0001c0001 a0001c0005 a0001c0015	a0001c0001t0001 a0001c0001t0002 a0001c0005t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0005t0002 a0001c0015t0002	a0001c0001t0001g0278 a0001c0001t0002g0141 a0001c0005t0002g0019 others(3): Show a0001c0001t0001g0278 a0001c0001t0002g0141 a0001c0005t0002g0019 a0001c0005t0002g0134 a0001c0005t0002g0137 a0001c0015t0002g0040	7	332	0.0211	0	c.-46 others(5): Show c.-4630C>G	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4560	chr12	TogoVar
A2M_chr12_9062708_9120919	9120482	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0083 a0001c0009t0002g0083	1	332	0.0030	0	c.-46 others(5): Show c.-4633C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4563	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CAT CAT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00733.hp2 others(14): Show HG00099.hp1 HG00140.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01070.hp1 HG01123.hp2 HG01361.hp1 HG01993.hp1 HG02559.hp2 HG02572.hp1 HG02622.hp1 HG03017.hp1 HG03209.hp2 HG06807.hp1 HG06807.hp2 NA21309.hp1	a0001 a0002 a0009 a0001 a0002 a0009	a0001c0001 a0001c0005 a0002c0002 others(1): Show a0001c0001 a0001c0005 a0002c0002 a0009c0012	a0001c0001t0002 a0001c0005t0002 a0002c0002t0002 others(1): Show a0001c0001t0002 a0001c0005t0002 a0002c0002t0002 a0009c0012t0002	a0001c0001t0002g0141 a0001c0005t0002g0019 a0001c0005t0002g0134 others(12): Show a0001c0001t0002g0141 a0001c0005t0002g0019 a0001c0005t0002g0134 a0001c0005t0002g0137 a0002c0002t0002g0007 a0002c0002t0002g0085 a0002c0002t0002g0086 a0002c0002t0002g0096 a0002c0002t0002g0097 a0002c0002t0002g0098 a0002c0002t0002g0099 a0002c0002t0002g0119 a0002c0002t0002g0120 a0002c0002t0002g0121 a0009c0012t0002g0094	17	332	0.0512	2	c.-50 others(13): Show c.-5004_-5003insAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CATGTGT CATGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02056.hp1 HG02145.hp2 NA19030.hp2 HG02056.hp1 HG02145.hp2 NA19030.hp2	a0001 a0015 a0001 a0015	a0001c0001 a0001c0009 a0015c0020 a0001c0001 a0001c0009 a0015c0020	a0001c0001t0002 a0001c0009t0002 a0015c0020t0002 a0001c0001t0002 a0001c0009t0002 a0015c0020t0002	a0001c0001t0002g0051 a0001c0009t0002g0083 a0015c0020t0002g0080 a0001c0001t0002g0051 a0001c0009t0002g0083 a0015c0020t0002g0080	3	332	0.0090	6	c.-50 others(17): Show c.-5004_-5003insACACAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CATGTGTG others(1): Show CATGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03491.hp2 HG03492.hp1 HG04199.hp2 others(13): Show HG03491.hp2 HG03492.hp1 HG04199.hp2 NA18953.hp2 NA18970.hp1 NA18974.hp1 NA18979.hp2 NA18982.hp2 NA18993.hp1 NA18995.hp1 NA18999.hp2 NA19001.hp1 NA19003.hp2 NA19005.hp2 NA19066.hp1 NA20300.hp2	a0001 a0012 a0001 a0012	a0001c0001 a0012c0014 a0001c0001 a0012c0014	a0001c0001t0002 a0012c0014t0002 a0001c0001t0002 a0012c0014t0002	a0001c0001t0002g0002 a0001c0001t0002g0012 a0001c0001t0002g0047 others(9): Show a0001c0001t0002g0002 a0001c0001t0002g0012 a0001c0001t0002g0047 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0002g0072 a0001c0001t0002g0081 a0001c0001t0002g0084 a0012c0014t0002g0079	16	332	0.0482	8	c.-50 others(19): Show c.-5004_-5003insACACACAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CATGTGTG others(3): Show CATGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG01070.hp2 HG01071.hp2 others(20): Show HG00639.hp1 HG01070.hp2 HG01071.hp2 HG01243.hp2 HG01358.hp1 HG02055.hp1 HG02257.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02738.hp2 HG02886.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03139.hp2 HG03209.hp1 HG03453.hp1 HG03540.hp2 HG03942.hp2 HG04228.hp2 NA18906.hp2 NA19240.hp1	a0001 a0002 a0014 a0001 a0002 a0014	a0001c0001 a0001c0003 a0001c0009 others(3): Show a0001c0001 a0001c0003 a0001c0009 a0001c0021 a0002c0002 a0014c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0003t0002 a0001c0009t0002 a0001c0021t0002 a0002c0002t0002 a0014c0019t0002	a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 others(18): Show a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0002g0005 a0001c0001t0002g0041 a0001c0001t0002g0046 a0001c0001t0002g0054 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0003g0037 a0001c0003t0002g0003 a0001c0003t0002g0014 a0001c0003t0002g0073 a0001c0003t0002g0074 a0001c0003t0002g0075 a0001c0003t0002g0077 a0001c0009t0002g0082 a0001c0021t0002g0076 a0002c0002t0002g0016 a0014c0019t0002g0043	23	332	0.0693	10	c.-50 others(21): Show c.-5004_-5003insACACACACAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CATGTGTG others(5): Show CATGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01256.hp2 HG02145.hp1 others(5): Show HG00738.hp1 HG01256.hp2 HG02145.hp1 HG03130.hp2 HG03225.hp2 HG04184.hp1 NA18906.hp1 NA19030.hp1	a0001 a0016 a0001 a0016	a0001c0001 a0016c0013 a0001c0001 a0016c0013	a0001c0001t0002 a0016c0013t0002 a0001c0001t0002 a0016c0013t0002	a0001c0001t0002g0042 a0001c0001t0002g0045 a0001c0001t0002g0050 others(5): Show a0001c0001t0002g0042 a0001c0001t0002g0045 a0001c0001t0002g0050 a0001c0001t0002g0052 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0078 a0016c0013t0002g0049	8	332	0.0241	12	c.-50 others(23): Show c.-5004_-5003insACACACACACAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CATGTGTG others(7): Show CATGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG03486.hp1 HG03927.hp1 others(1): Show HG02809.hp1 HG03486.hp1 HG03927.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 a0001c0001t0001 a0001c0001t0002 a0001c0003t0002	a0001c0001t0001g0234 a0001c0001t0002g0044 a0001c0001t0002g0070 others(1): Show a0001c0001t0001g0234 a0001c0001t0002g0044 a0001c0001t0002g0070 a0001c0003t0002g0048	4	332	0.0121	14	c.-50 others(25): Show c.-5004_-5003insACACACACACACAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CATGTGTG others(9): Show CATGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 NA18522.hp1 HG01109.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0053 a0001c0001t0002g0071 a0001c0001t0002g0053 a0001c0001t0002g0071	2	332	0.0060	16	c.-50 others(27): Show c.-5004_-5003insACACACACACACACAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CATGTGTG others(19): Show CATGTGTGTGTGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0022 a0001c0022	a0001c0022t0002 a0001c0022t0002	a0001c0022t0002g0039 a0001c0022t0002g0039	1	332	0.0030	26	c.-50 others(37): Show c.-5004_-5003insACACACACACACACACACACACACAT	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CGTGTGTG others(1): Show CGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00544.hp2 HG01069.hp1 others(34): Show HG00408.hp2 HG00544.hp2 HG01069.hp1 HG01071.hp1 HG01106.hp2 HG01109.hp2 HG01433.hp2 HG01884.hp2 HG01928.hp2 HG01952.hp2 HG01978.hp1 HG02015.hp1 HG02040.hp1 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG03041.hp1 HG03195.hp1 HG03491.hp1 HG03669.hp1 HG03831.hp1 HG04115.hp1 HG04204.hp1 NA18957.hp1 NA18962.hp1 NA18972.hp2 NA18981.hp1 NA18995.hp2 NA19012.hp1 NA19056.hp1 NA19076.hp1 NA19082.hp2 NA19083.hp1 NA19086.hp1 NA20129.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0006 a0007 a0008	a0001c0001 a0001c0011 a0001c0017 others(5): Show a0001c0001 a0001c0011 a0001c0017 a0002c0002 a0003c0004 a0006c0008 a0007c0027 a0008c0025	a0001c0001t0001 a0001c0001t0002 a0001c0011t0001 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0011t0001 a0001c0017t0001 a0002c0002t0001 a0002c0002t0002 a0003c0004t0001 a0006c0008t0001 a0007c0027t0001 a0008c0025t0001	a0001c0001t0001g0011 a0001c0001t0001g0030 a0001c0001t0001g0034 others(27): Show a0001c0001t0001g0011 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0203 a0001c0001t0001g0224 a0001c0001t0001g0227 a0001c0001t0001g0233 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0260 a0001c0001t0001g0263 a0001c0001t0001g0265 a0001c0001t0001g0267 a0001c0001t0001g0270 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0278 a0001c0001t0002g0144 a0001c0011t0001g0264 a0001c0011t0001g0266 a0001c0017t0001g0236 a0002c0002t0001g0210 a0002c0002t0002g0006 a0002c0002t0002g0129 a0003c0004t0001g0001 a0003c0004t0001g0163 a0006c0008t0001g0217 a0007c0027t0001g0277 a0008c0025t0001g0276	37	332	0.1115	8	c.-50 others(19): Show c.-5004_-5003insACACACAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CGTGTGTG others(3): Show CGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00544.hp1 HG00609.hp1 others(76): Show HG00408.hp1 HG00544.hp1 HG00609.hp1 HG00735.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp2 HG01123.hp1 HG01175.hp2 HG01192.hp1 HG01257.hp1 HG01257.hp2 HG01261.hp2 HG01358.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp2 HG01517.hp2 HG02040.hp2 HG02071.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02155.hp2 HG02300.hp1 HG02523.hp2 HG02602.hp1 HG02622.hp2 HG03453.hp2 HG03490.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04184.hp2 NA18940.hp2 NA18943.hp1 NA18953.hp1 NA18955.hp1 NA18955.hp2 NA18960.hp1 NA18962.hp2 NA18967.hp2 NA18969.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp2 NA18979.hp1 NA18981.hp2 NA18983.hp2 NA18990.hp2 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19001.hp2 NA19003.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19063.hp2 NA19066.hp2 NA19074.hp1 NA19076.hp2 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19088.hp1 NA19090.hp2 NA19091.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0026 a0002c0002 others(3): Show a0001c0001 a0001c0026 a0002c0002 a0003c0004 a0004c0006 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0026t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0026t0001 a0002c0002t0001 a0002c0002t0002 a0003c0004t0001 a0004c0006t0001 a0006c0008t0001	a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0022 others(62): Show a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0022 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0185 a0001c0001t0001g0188 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0206 a0001c0001t0001g0209 a0001c0001t0001g0212 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0220 a0001c0001t0001g0225 a0001c0001t0001g0238 a0001c0001t0001g0255 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0002g0143 a0001c0026t0001g0219 a0002c0002t0001g0211 a0002c0002t0002g0015 a0002c0002t0002g0100 a0002c0002t0002g0102 a0002c0002t0002g0115 a0002c0002t0002g0118 a0002c0002t0002g0124 a0003c0004t0001g0001 a0004c0006t0001g0187 a0004c0006t0001g0199 a0004c0006t0001g0204 a0004c0006t0001g0205 a0006c0008t0001g0229	79	332	0.2380	10	c.-50 others(21): Show c.-5004_-5003insACACACACAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CGTGTGTG others(5): Show CGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00558.hp2 HG00621.hp1 others(33): Show HG00140.hp2 HG00558.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00733.hp1 HG00741.hp1 HG00741.hp2 HG01433.hp1 HG01515.hp1 HG01517.hp1 HG01934.hp2 HG02074.hp1 HG02129.hp1 HG02155.hp1 HG02273.hp1 HG02300.hp2 HG02559.hp1 HG02602.hp2 HG02630.hp1 HG02683.hp1 HG02886.hp1 HG02895.hp1 HG02976.hp1 HG03017.hp2 HG03139.hp1 HG03516.hp1 NA18940.hp1 NA18947.hp1 NA18963.hp1 NA18971.hp1 NA18973.hp1 NA18974.hp2 NA19012.hp2 NA19068.hp2 NA19088.hp2	a0001 a0002 a0010 others(1): Show a0001 a0002 a0010 a0011	a0001c0001 a0002c0002 a0010c0023 others(1): Show a0001c0001 a0002c0002 a0010c0023 a0011c0024	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 others(2): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0010c0023t0001 a0011c0024t0001	a0001c0001t0001g0008 a0001c0001t0001g0026 a0001c0001t0001g0028 others(30): Show a0001c0001t0001g0008 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0033 a0001c0001t0001g0158 a0001c0001t0001g0170 a0001c0001t0001g0177 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0186 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0195 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0218 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0226 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0259 a0001c0001t0001g0262 a0001c0001t0002g0013 a0001c0001t0002g0059 a0001c0001t0002g0067 a0002c0002t0002g0016 a0010c0023t0001g0213 a0011c0024t0001g0214	36	332	0.1084	12	c.-50 others(23): Show c.-5004_-5003insACACACACACAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CGTGTGTG others(7): Show CGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp2 HG03516.hp2 NA18965.hp1 others(2): Show HG02280.hp2 HG03516.hp2 NA18965.hp1 NA18972.hp1 NA19068.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0031 a0001c0001t0001g0162 a0001c0001t0001g0191 others(2): Show a0001c0001t0001g0031 a0001c0001t0001g0162 a0001c0001t0001g0191 a0001c0001t0001g0223 a0002c0002t0002g0110	5	332	0.0151	14	c.-50 others(25): Show c.-5004_-5003insACACACACACACAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	C C	CGTGTGTG others(9): Show CGTGTGTGTGTGTGTGT	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	1	332	0.0030	16	c.-50 others(27): Show c.-5004_-5003insACACACACACACACAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120852	CGT CGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp1 HG02258.hp1 HG02280.hp1 others(10): Show HG01952.hp1 HG02258.hp1 HG02280.hp1 HG02486.hp2 HG02922.hp1 HG02922.hp2 HG03041.hp2 HG03225.hp1 NA18522.hp2 NA19043.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0002 a0001c0005t0002 a0002c0002t0002 a0001c0001t0002 a0001c0005t0002 a0002c0002t0002	a0001c0001t0002g0005 a0001c0001t0002g0055 a0001c0001t0002g0057 others(9): Show a0001c0001t0002g0005 a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0001t0002g0088 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0005t0002g0136 a0001c0005t0002g0142 a0002c0002t0002g0087 a0002c0002t0002g0103	13	332	0.0392	-2	c.-50 others(13): Show c.-5005_-5004delAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120853	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00609.hp2 HG00642.hp2 others(38): Show HG00423.hp2 HG00609.hp2 HG00642.hp2 HG01069.hp2 HG01106.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01496.hp2 HG01884.hp1 HG01928.hp1 HG01934.hp1 HG01978.hp2 HG02074.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02486.hp1 HG02572.hp2 HG02735.hp1 HG02895.hp2 HG03471.hp2 HG03490.hp2 HG03492.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp2 HG03927.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 NA18944.hp1 NA18965.hp2 NA18969.hp2 NA18990.hp1 NA19043.hp1 NA19080.hp1 NA19086.hp2 NA19090.hp1 NA19091.hp1	a0001 a0002 a0013 a0001 a0002 a0013	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0002c0010 a0013c0016	a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0003t0002 a0002c0002t0002 a0002c0010t0002 a0013c0016t0002	a0001c0001t0001g0161 a0001c0001t0001g0171 a0001c0001t0001g0172 others(31): Show a0001c0001t0001g0161 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0002g0089 a0001c0001t0002g0104 a0001c0001t0002g0106 a0001c0003t0002g0003 a0002c0002t0002g0004 a0002c0002t0002g0006 a0002c0002t0002g0017 a0002c0002t0002g0018 a0002c0002t0002g0095 a0002c0002t0002g0105 a0002c0002t0002g0107 a0002c0002t0002g0108 a0002c0002t0002g0109 a0002c0002t0002g0111 a0002c0002t0002g0112 a0002c0002t0002g0113 a0002c0002t0002g0114 a0002c0002t0002g0116 a0002c0002t0002g0122 a0002c0002t0002g0123 a0002c0002t0002g0125 a0002c0002t0002g0126 a0002c0002t0002g0127 a0002c0002t0002g0128 a0002c0002t0002g0130 a0002c0002t0002g0132 a0002c0010t0002g0138 a0002c0010t0002g0140 a0013c0016t0002g0139	41	332	0.1235	0	c.-50 others(5): Show c.-5004C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4934	chr12	TogoVar
A2M_chr12_9062708_9120919	9120855	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp1 HG02922.hp1 NA19240.hp2 others(1): Show HG01952.hp1 HG02922.hp1 NA19240.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0002 a0001c0005t0002 a0002c0002t0002 a0001c0001t0002 a0001c0005t0002 a0002c0002t0002	a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0005t0002g0136 others(1): Show a0001c0001t0002g0055 a0001c0001t0002g0057 a0001c0005t0002g0136 a0002c0002t0002g0103	4	332	0.0121	0	c.-50 others(5): Show c.-5006C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4936	chr12	TogoVar
A2M_chr12_9062708_9120919	9120857	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0019 a0001c0005t0002g0019	1	332	0.0030	0	c.-50 others(5): Show c.-5008C>T	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4938	chr12	TogoVar
A2M_chr12_9062708_9120919	9120884	T T	TGTGTGTG others(4): Show TGTGTGTGTGTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	332	0.0030	11	c.-50 others(22): Show c.-5036_-5035insTACACACACAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4966	chr12	TogoVar
A2M_chr12_9062708_9120919	9120885	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02056.hp2 HG02683.hp2 HG02698.hp2 others(3): Show HG02056.hp2 HG02683.hp2 HG02698.hp2 HG02809.hp2 NA19063.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0015 a0001c0001 a0001c0015	a0001c0001t0001 a0001c0015t0002 a0001c0001t0001 a0001c0015t0002	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0149 others(2): Show a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0149 a0001c0001t0001g0202 a0001c0015t0002g0040	6	332	0.0181	0	c.-50 others(5): Show c.-5036T>C	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4966	chr12	TogoVar
A2M_chr12_9062708_9120919	9120885	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	332	0.0030	0	c.-50 others(5): Show c.-5036T>A	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4966	chr12	TogoVar
A2M_chr12_9062708_9120919	9120886	T T	TGTGTGTG others(2): Show TGTGTGTGTA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02683.hp2 HG02698.hp2 NA19063.hp1 others(1): Show HG02683.hp2 HG02698.hp2 NA19063.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0202 a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0202	4	332	0.0121	9	c.-50 others(20): Show c.-5038_-5037insTACACACAC	A2M	ENSG00000175899.15	transcript	ENST00000318602.12	protein_coding	4968	chr12	TogoVar
A3GALT2_chr1_33301766_33326098	33321249	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp2 HG03579.hp2 HG03516.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0000 a0001c0014t0000 a0001c0001t0000 a0001c0014t0000	a0001c0001t0000g0159 a0001c0014t0000g0160 a0001c0001t0000g0159 a0001c0014t0000g0160	2	418	0.0048	0	c.-15 others(4): Show c.-151C>T	A3GALT2	ENSG00000184389.9	transcript	ENST00000442999.3	protein_coding	151	chr1	TogoVar
A3GALT2_chr1_33301766_33326098	33321277	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00597.hp1 HG02027.hp1 others(43): Show HG00558.hp1 HG00597.hp1 HG02027.hp1 HG02040.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02155.hp2 HG03490.hp2 HG03492.hp2 HG03927.hp2 NA18942.hp1 NA18943.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp2 NA18949.hp2 NA18953.hp2 NA18954.hp1 NA18955.hp2 NA18956.hp2 NA18957.hp1 NA18964.hp1 NA18966.hp1 NA18967.hp1 NA18974.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp1 NA18983.hp2 NA18987.hp2 NA18988.hp1 NA18998.hp2 NA19010.hp1 NA19054.hp1 NA19055.hp2 NA19057.hp1 NA19065.hp1 NA19066.hp1 NA19067.hp2 NA19077.hp2 NA19087.hp2 NA19090.hp1 NA19091.hp1 NA20752.hp1	a0001 a0011 a0001 a0011	a0001c0001 a0011c0012 a0001c0001 a0011c0012	a0001c0001t0000 a0011c0012t0000 a0001c0001t0000 a0011c0012t0000	a0001c0001t0000g0004 a0001c0001t0000g0014 a0001c0001t0000g0015 others(21): Show a0001c0001t0000g0004 a0001c0001t0000g0014 a0001c0001t0000g0015 a0001c0001t0000g0033 a0001c0001t0000g0118 a0001c0001t0000g0119 a0001c0001t0000g0120 a0001c0001t0000g0121 a0001c0001t0000g0125 a0001c0001t0000g0126 a0001c0001t0000g0129 a0001c0001t0000g0134 a0001c0001t0000g0135 a0001c0001t0000g0136 a0001c0001t0000g0138 a0001c0001t0000g0139 a0001c0001t0000g0141 a0001c0001t0000g0142 a0001c0001t0000g0143 a0001c0001t0000g0144 a0001c0001t0000g0151 a0001c0001t0000g0152 a0001c0001t0000g0153 a0011c0012t0000g0137	46	418	0.1101	0	c.-17 others(4): Show c.-179C>T	A3GALT2	ENSG00000184389.9	transcript	ENST00000442999.3	protein_coding	179	chr1	TogoVar
A3GALT2_chr1_33301766_33326098	33321305	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0042 a0001c0001t0000g0042	1	418	0.0024	0	c.-20 others(4): Show c.-207C>A	A3GALT2	ENSG00000184389.9	transcript	ENST00000442999.3	protein_coding	207	chr1	TogoVar
A3GALT2_chr1_33301766_33326098	33321586	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02055.hp1 HG02145.hp1 HG02280.hp2 others(2): Show HG02055.hp1 HG02145.hp1 HG02280.hp2 HG02970.hp1 HG03130.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0000 a0002c0002t0000 a0001c0001t0000 a0002c0002t0000	a0001c0001t0000g0113 a0002c0002t0000g0109 a0002c0002t0000g0111 others(2): Show a0001c0001t0000g0113 a0002c0002t0000g0109 a0002c0002t0000g0111 a0002c0002t0000g0147 a0002c0002t0000g0148	5	418	0.0120	0	c.-48 others(4): Show c.-488T>C	A3GALT2	ENSG00000184389.9	transcript	ENST00000442999.3	protein_coding	488	chr1	TogoVar

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