Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	chr	external
GOLGA3_chr12_132763914_132833869	132822170	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01175.hp2 HG02818.hp1 HG02886.hp2 others(4): Show HG01175.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG03130.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 others(4): Show a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0032 a0002c0007t0031	a0001c0001t0026g0302 a0001c0001t0027g0306 a0001c0001t0028g0305 others(4): Show a0001c0001t0026g0302 a0001c0001t0027g0306 a0001c0001t0028g0305 a0001c0001t0029g0304 a0001c0001t0030g0303 a0001c0001t0032g0107 a0002c0007t0031g0307	7	308	0.0227	c.-42 others(3): Show c.-42T>C	GOLGA3	ENSG00000090615.16	transcript	ENST00000450791.8	protein_coding	2/24	chr12	TogoVar
GOLGA6L2_chr15_23434038_23452243	23447223	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02615.hp1 HG02970.hp1 HG03209.hp1 others(2): Show HG02615.hp1 HG02970.hp1 HG03209.hp1 HG03225.hp1 HG06807.hp2	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0008 a0002c0011t0008	a0002c0011t0008g0018 a0002c0011t0008g0138 a0002c0011t0008g0018 a0002c0011t0008g0138	5	396	0.0126	c.-42 others(3): Show c.-42C>T	GOLGA6L2	ENSG00000174450.13	transcript	ENST00000567107.6	protein_coding	1/8	chr15	TogoVar
GOLGA6L7_chr15_28836832_28853644	28848623	C C	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01891.hp1 HG02572.hp1 HG02965.hp1 others(1): Show HG01891.hp1 HG02572.hp1 HG02965.hp1 NA20300.hp2	a0019 a0052 a0053 a0019 a0052 a0053	a0019c0018 a0052c0044 a0053c0043 a0019c0018 a0052c0044 a0053c0043	a0019c0018t0007 a0052c0044t0012 a0053c0043t0011 a0019c0018t0007 a0052c0044t0012 a0053c0043t0011	a0019c0018t0007g0031 a0052c0044t0012g0048 a0053c0043t0011g0049 a0019c0018t0007g0031 a0052c0044t0012g0048 a0053c0043t0011g0049	4	422	0.0095	c.-74 others(3): Show c.-74G>C	GOLGA6L7	ENSG00000261649.7	transcript	ENST00000567390.7	protein_coding	1/9	chr15	TogoVar
GOLGA6L7_chr15_28836832_28853644	28848623	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19012.hp1 NA19012.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0047 a0001c0001t0010g0047	1	422	0.0024	c.-74 others(3): Show c.-74G>A	GOLGA6L7	ENSG00000261649.7	transcript	ENST00000567390.7	protein_coding	1/9	chr15	TogoVar
GOLGA6L9_chr15_82424816_82444153	82429951	T T	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0043 a0001c0001t0043	a0001c0001t0043g0091 a0001c0001t0043g0091	1	455	0.0022	c.-12 others(4): Show c.-129T>A	GOLGA6L9	ENSG00000197978.10	transcript	ENST00000618348.2	protein_coding	1/9	chr15	TogoVar
GOLGA7B_chr10_97844843_97876578	97850118	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02965.hp1 NA20300.hp2 HG02965.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0032 a0001c0001t0018g0032	2	336	0.0060	c.-18 others(4): Show c.-186C>T	GOLGA7B	ENSG00000155265.12	transcript	ENST00000370602.6	protein_coding	1/5	chr10	TogoVar
GOLGA7_chr8_41485582_41515980	41490648	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00639.hp2 HG01167.hp1 HG01175.hp2 others(3): Show HG00639.hp2 HG01167.hp1 HG01175.hp2 HG01243.hp1 HG01346.hp1 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0007 a0001c0001t0009g0008 a0001c0001t0009g0088 a0001c0001t0009g0007 a0001c0001t0009g0008 a0001c0001t0009g0088	6	350	0.0171	c.-20 others(4): Show c.-207G>T	GOLGA7	ENSG00000147533.19	transcript	ENST00000357743.9	protein_coding	1/5	chr8	TogoVar
GOLGA7_chr8_41485582_41515980	41490799	C C	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01099.hp2 HG01257.hp2 HG01258.hp2 others(16): Show HG01099.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp2 HG02074.hp1 HG02132.hp2 HG02148.hp2 HG02165.hp1 HG02273.hp2 HG02300.hp1 NA18951.hp2 NA18974.hp2 NA19001.hp2 NA19007.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0022 a0001c0001t0005 a0001c0001t0022	a0001c0001t0005g0004 a0001c0001t0005g0042 a0001c0001t0005g0043 others(3): Show a0001c0001t0005g0004 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0005g0129 a0001c0001t0005g0130 a0001c0001t0022g0004	19	350	0.0543	c.-56 others(3): Show c.-56C>G	GOLGA7	ENSG00000147533.19	transcript	ENST00000357743.9	protein_coding	1/5	chr8	TogoVar
GOLGA7_chr8_41485582_41515980	41490808	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01099.hp1 HG02698.hp1 HG03491.hp1 others(4): Show HG01099.hp1 HG02698.hp1 HG03491.hp1 HG03492.hp1 HG03834.hp1 HG04204.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0012 a0001c0001t0008g0131 a0001c0001t0008g0137 a0001c0001t0008g0012 a0001c0001t0008g0131 a0001c0001t0008g0137	7	350	0.0200	c.-47 others(3): Show c.-47G>T	GOLGA7	ENSG00000147533.19	transcript	ENST00000357743.9	protein_coding	1/5	chr8	TogoVar
GOLGA8A_chr15_34374068_34442808	34391204	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00408.hp2 HG00558.hp2 HG00408.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0070 a0001c0001t0074 a0001c0001t0070 a0001c0001t0074	a0001c0001t0070g0067 a0001c0001t0074g0083 a0001c0001t0070g0067 a0001c0001t0074g0083	2	245	0.0082	c.-15 others(4): Show c.-159C>T	GOLGA8A	ENSG00000175265.19	transcript	ENST00000359187.5	protein_coding	9/25	chr15	TogoVar
GOLGA8A_chr15_34374068_34442808	34399174	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00140.hp1 HG00280.hp2 HG00323.hp1 others(42): Show HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00544.hp1 HG00544.hp2 HG00639.hp1 HG00735.hp1 HG00738.hp2 HG00741.hp2 HG01074.hp2 HG01109.hp2 HG01123.hp1 HG01192.hp2 HG01516.hp2 HG02027.hp1 HG02027.hp2 HG02083.hp2 HG02165.hp2 HG02572.hp1 HG02630.hp1 HG02647.hp2 HG02895.hp2 HG02897.hp2 HG02976.hp2 HG03017.hp2 HG03209.hp2 HG03486.hp1 HG03516.hp2 HG03704.hp2 HG03831.hp1 HG03834.hp2 HG04204.hp1 HG04228.hp2 NA18942.hp2 NA18952.hp2 NA18978.hp2 NA18990.hp2 NA19004.hp2 NA19007.hp1 NA19082.hp1 NA20129.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1	a0001 a0002 a0004 others(10): Show a0001 a0002 a0004 a0005 a0010 a0013 a0017 a0022 a0023 a0025 a0026 a0027 a0028	a0001c0001 a0002c0002 a0004c0004 others(10): Show a0001c0001 a0002c0002 a0004c0004 a0005c0005 a0010c0010 a0013c0016 a0017c0023 a0022c0033 a0023c0034 a0025c0036 a0026c0043 a0027c0044 a0028c0045	a0001c0001t0050 a0001c0001t0052 a0001c0001t0056 others(31): Show a0001c0001t0050 a0001c0001t0052 a0001c0001t0056 a0001c0001t0060 a0001c0001t0067 a0001c0001t0072 a0002c0002t0102 a0004c0004t0025 a0004c0004t0026 a0004c0004t0033 a0004c0004t0034 a0004c0004t0035 a0004c0004t0037 a0004c0004t0038 a0004c0004t0040 a0004c0004t0107 a0004c0004t0109 a0004c0004t0115 a0005c0005t0029 a0005c0005t0066 a0005c0005t0083 a0005c0005t0089 a0010c0010t0027 a0010c0010t0063 a0010c0010t0081 a0013c0016t0110 a0017c0023t0111 a0017c0023t0123 a0022c0033t0087 a0023c0034t0080 a0025c0036t0093 a0026c0043t0105 a0027c0044t0124 a0028c0045t0025	a0001c0001t0050g0017 a0001c0001t0052g0018 a0001c0001t0056g0025 others(42): Show a0001c0001t0050g0017 a0001c0001t0052g0018 a0001c0001t0056g0025 a0001c0001t0060g0036 a0001c0001t0067g0072 a0001c0001t0072g0084 a0002c0002t0102g0185 a0004c0004t0025g0212 a0004c0004t0025g0214 a0004c0004t0026g0221 a0004c0004t0026g0222 a0004c0004t0026g0224 a0004c0004t0033g0200 a0004c0004t0033g0201 a0004c0004t0034g0203 a0004c0004t0034g0206 a0004c0004t0035g0208 a0004c0004t0035g0209 a0004c0004t0037g0227 a0004c0004t0037g0228 a0004c0004t0038g0230 a0004c0004t0038g0231 a0004c0004t0040g0238 a0004c0004t0040g0240 a0004c0004t0107g0204 a0004c0004t0109g0205 a0004c0004t0115g0223 a0005c0005t0029g0060 a0005c0005t0029g0061 a0005c0005t0066g0042 a0005c0005t0083g0093 a0005c0005t0089g0113 a0010c0010t0027g0043 a0010c0010t0027g0044 a0010c0010t0063g0031 a0010c0010t0081g0094 a0013c0016t0110g0210 a0017c0023t0111g0211 a0017c0023t0123g0237 a0022c0033t0087g0129 a0023c0034t0080g0112 a0025c0036t0093g0131 a0026c0043t0105g0199 a0027c0044t0124g0239 a0028c0045t0025g0215	45	245	0.1837	c.-49 others(4): Show c.-497T>C	GOLGA8A	ENSG00000175265.19	transcript	ENST00000359187.5	protein_coding	7/25	chr15	TogoVar
GOLGA8A_chr15_34374068_34442808	34406840	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01109.hp1 HG02559.hp2 HG02896.hp2 others(3): Show HG01109.hp1 HG02559.hp2 HG02896.hp2 HG03041.hp1 HG03195.hp1 HG03486.hp2	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0036 a0008c0008t0118 a0008c0008t0121 others(2): Show a0008c0008t0036 a0008c0008t0118 a0008c0008t0121 a0008c0008t0122 a0008c0008t0128	a0008c0008t0036g0216 a0008c0008t0036g0217 a0008c0008t0118g0225 others(3): Show a0008c0008t0036g0216 a0008c0008t0036g0217 a0008c0008t0118g0225 a0008c0008t0121g0234 a0008c0008t0122g0235 a0008c0008t0128g0244	6	245	0.0245	c.-88 others(4): Show c.-880C>T	GOLGA8A	ENSG00000175265.19	transcript	ENST00000359187.5	protein_coding	4/25	chr15	TogoVar
GOLGA8A_chr15_34374068_34442808	34407557	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03209.hp2 NA20129.hp2 HG03209.hp2 NA20129.hp2	a0017 a0017	a0017c0023 a0017c0023	a0017c0023t0111 a0017c0023t0123 a0017c0023t0111 a0017c0023t0123	a0017c0023t0111g0211 a0017c0023t0123g0237 a0017c0023t0111g0211 a0017c0023t0123g0237	2	245	0.0082	c.-94 others(4): Show c.-944C>T	GOLGA8A	ENSG00000175265.19	transcript	ENST00000359187.5	protein_coding	3/25	chr15	TogoVar
GOLGA8B_chr15_34520095_34588651	34537408	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0146 a0001c0001t0031g0146	1	198	0.0051	c.-14 others(4): Show c.-142C>T	GOLGA8B	ENSG00000215252.12	transcript	ENST00000683415.1	protein_coding	8/24	chr15	TogoVar
GOLGA8B_chr15_34520095_34588651	34544925	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0159 a0001c0001t0032g0159	1	198	0.0051	c.-44 others(4): Show c.-449C>T	GOLGA8B	ENSG00000215252.12	transcript	ENST00000683415.1	protein_coding	7/24	chr15	TogoVar
GOLGA8B_chr15_34520095_34588651	34544934	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03041.hp2 HG03041.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0018 a0004c0004t0018	a0004c0004t0018g0055 a0004c0004t0018g0055	1	198	0.0051	c.-45 others(4): Show c.-458C>G	GOLGA8B	ENSG00000215252.12	transcript	ENST00000683415.1	protein_coding	7/24	chr15	TogoVar
GOLGA8B_chr15_34520095_34588651	34545397	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00438.hp1 HG00642.hp1 HG00735.hp2 others(24): Show HG00438.hp1 HG00642.hp1 HG00735.hp2 HG01258.hp1 HG01261.hp1 HG01981.hp2 HG02004.hp1 HG02129.hp2 HG02145.hp2 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02630.hp2 HG02698.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03486.hp2 HG03492.hp2 HG04184.hp2 NA18612.hp2 NA18906.hp1 NA18948.hp2 NA19043.hp1 NA20752.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0005 a0006 a0011 a0020 a0021 a0022 a0023	a0001c0001 a0002c0002 a0003c0003 others(7): Show a0001c0001 a0002c0002 a0003c0003 a0005c0007 a0006c0006 a0011c0010 a0020c0016 a0021c0015 a0022c0017 a0023c0018	a0001c0001t0033 a0002c0002t0015 a0003c0003t0003 others(11): Show a0001c0001t0033 a0002c0002t0015 a0003c0003t0003 a0003c0003t0019 a0003c0003t0020 a0003c0003t0021 a0005c0007t0006 a0006c0006t0003 a0006c0006t0008 a0011c0010t0003 a0020c0016t0003 a0021c0015t0003 a0022c0017t0008 a0023c0018t0006	a0001c0001t0033g0097 a0002c0002t0015g0062 a0003c0003t0003g0071 others(23): Show a0001c0001t0033g0097 a0002c0002t0015g0062 a0003c0003t0003g0071 a0003c0003t0003g0072 a0003c0003t0003g0074 a0003c0003t0003g0077 a0003c0003t0003g0079 a0003c0003t0003g0080 a0003c0003t0003g0083 a0003c0003t0003g0086 a0003c0003t0019g0081 a0003c0003t0020g0082 a0003c0003t0021g0078 a0005c0007t0006g0045 a0005c0007t0006g0046 a0005c0007t0006g0047 a0005c0007t0006g0048 a0006c0006t0003g0084 a0006c0006t0008g0003 a0006c0006t0008g0075 a0011c0010t0003g0085 a0011c0010t0003g0087 a0020c0016t0003g0073 a0021c0015t0003g0089 a0022c0017t0008g0076 a0023c0018t0006g0090	27	198	0.1364	c.-49 others(4): Show c.-497C>T	GOLGA8B	ENSG00000215252.12	transcript	ENST00000683415.1	protein_coding	6/24	chr15	TogoVar
GOLGA8B_chr15_34520095_34588651	34553037	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01106.hp1 HG01106.hp1	a0007 a0007	a0007c0008 a0007c0008	a0007c0008t0022 a0007c0008t0022	a0007c0008t0022g0092 a0007c0008t0022g0092	1	198	0.0051	c.-85 others(4): Show c.-856T>C	GOLGA8B	ENSG00000215252.12	transcript	ENST00000683415.1	protein_coding	3/24	chr15	TogoVar
GOLGA8J_chr15_30077955_30101690	30082976	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02895.hp2 HG02897.hp1 NA19043.hp1 HG02895.hp2 HG02897.hp1 NA19043.hp1	a0023 a0054 a0023 a0054	a0023c0019 a0054c0047 a0023c0019 a0054c0047	a0023c0019t0012 a0054c0047t0012 a0023c0019t0012 a0054c0047t0012	a0023c0019t0012g0045 a0054c0047t0012g0179 a0023c0019t0012g0045 a0054c0047t0012g0179	3	345	0.0087	c.-77 others(3): Show c.-77G>C	GOLGA8J	ENSG00000179938.13	transcript	ENST00000567927.2	protein_coding	1/19	chr15	TogoVar
GOLGA8R_chr15_30395562_30419260	30414221	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0018 a0001c0018	a0001c0018t0048 a0001c0018t0048	a0001c0018t0048g0134 a0001c0018t0048g0134	1	184	0.0054	c.-59 others(3): Show c.-59C>G	GOLGA8R	ENSG00000186399.11	transcript	ENST00000327271.11	protein_coding	1/19	chr15	TogoVar
GOLGA8T_chr15_30130051_30153748	30135090	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18991.hp1 NA18994.hp2 NA18998.hp1 others(2): Show NA18991.hp1 NA18994.hp2 NA18998.hp1 NA19011.hp2 NA19068.hp2	a0005 a0007 a0031 a0005 a0007 a0031	a0005c0004 a0007c0006 a0031c0045 a0005c0004 a0007c0006 a0031c0045	a0005c0004t0011 a0007c0006t0019 a0031c0045t0019 a0005c0004t0011 a0007c0006t0019 a0031c0045t0019	a0005c0004t0011g0001 a0005c0004t0011g0094 a0007c0006t0019g0002 others(1): Show a0005c0004t0011g0001 a0005c0004t0011g0094 a0007c0006t0019g0002 a0031c0045t0019g0008	5	291	0.0172	c.-59 others(3): Show c.-59C>T	GOLGA8T	ENSG00000261247.2	transcript	ENST00000569052.2	protein_coding	1/19	chr15	TogoVar
GOLIM4_chr3_168003689_168100924	168095594	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03486.hp2 NA18906.hp1 HG03486.hp2 NA18906.hp1	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0020 a0004c0004t0020 a0002c0002t0020 a0004c0004t0020	a0002c0002t0020g0216 a0004c0004t0020g0217 a0002c0002t0020g0216 a0004c0004t0020g0217	2	228	0.0088	c.-30 others(4): Show c.-309C>T	GOLIM4	ENSG00000173905.9	transcript	ENST00000470487.6	protein_coding	1/16	chr3	TogoVar
GOLIM4_chr3_168003689_168100924	168095645	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02258.hp2 HG02895.hp2 HG02897.hp1 HG02258.hp2 HG02895.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0040 a0001c0001t0021 a0001c0001t0040	a0001c0001t0021g0218 a0001c0001t0021g0220 a0001c0001t0040g0219 a0001c0001t0021g0218 a0001c0001t0021g0220 a0001c0001t0040g0219	3	228	0.0132	c.-36 others(4): Show c.-360C>T	GOLIM4	ENSG00000173905.9	transcript	ENST00000470487.6	protein_coding	1/16	chr3	TogoVar
GOLIM4_chr3_168003689_168100924	168095914	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0044	a0001c0001t0044g0226 a0001c0001t0044g0226	1	228	0.0044	c.-62 others(4): Show c.-629C>T	GOLIM4	ENSG00000173905.9	transcript	ENST00000470487.6	protein_coding	1/16	chr3	TogoVar
GOLM1_chr9_86021146_86104558	86099453	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01981.hp2 HG01981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0314 a0001c0001t0024g0314	1	314	0.0032	c.-64 others(3): Show c.-64G>T	GOLM1	ENSG00000135052.16	transcript	ENST00000388712.7	protein_coding	1/10	chr9	TogoVar
GOLT1B_chr12_21496789_21523408	21501800	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02647.hp1 HG02723.hp1 HG03579.hp2 HG02647.hp1 HG02723.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0173 a0001c0001t0017g0175 a0001c0001t0017g0178 a0001c0001t0017g0173 a0001c0001t0017g0175 a0001c0001t0017g0178	3	430	0.0070	c.-12 others(4): Show c.-124C>A	GOLT1B	ENSG00000111711.10	transcript	ENST00000229314.10	protein_coding	1/5	chr12	TogoVar
GOPC_chr6_117555269_117607511	117602493	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0224 a0001c0001t0022g0224	1	382	0.0026	c.-20 others(4): Show c.-205C>T	GOPC	ENSG00000047932.14	transcript	ENST00000368498.7	protein_coding	1/9	chr6	TogoVar
GP9_chr3_129055779_129067406	129061508	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA21309.hp1 NA21309.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0001 a0001c0001t0004g0001	2	392	0.0051	c.-12 others(4): Show c.-124C>T	GP9	ENSG00000169704.5	transcript	ENST00000307395.5	protein_coding	2/3	chr3	TogoVar
GPA33_chr1_167047836_167095377	167090338	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(121): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00639.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01192.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp2 HG01981.hp1 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02074.hp1 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02145.hp1 HG02165.hp2 HG02257.hp2 HG02280.hp1 HG02293.hp1 HG02451.hp2 HG02630.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03669.hp2 HG03704.hp2 HG03927.hp1 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18612.hp1 NA18939.hp2 NA18940.hp2 NA18952.hp2 NA18963.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp2 NA18970.hp2 NA18971.hp1 NA18973.hp1 NA18975.hp1 NA18978.hp1 NA18981.hp2 NA18982.hp1 NA18985.hp1 NA18986.hp2 NA18991.hp2 NA18992.hp1 NA18999.hp2 NA19007.hp2 NA19011.hp1 NA19030.hp1 NA19043.hp2 NA19056.hp1 NA19057.hp2 NA19060.hp1 NA19064.hp1 NA19066.hp2 NA19074.hp2 NA19082.hp2 NA19089.hp2 NA19091.hp1 NA20300.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0002c0002 a0002c0004 others(2): Show a0001c0001 a0002c0002 a0002c0004 a0003c0003 a0005c0006	a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 others(10): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0014 a0001c0001t0016 a0002c0002t0003 a0002c0002t0004 a0002c0002t0015 a0002c0004t0003 a0003c0003t0005 a0005c0006t0003	a0001c0001t0003g0006 a0001c0001t0003g0011 a0001c0001t0003g0019 others(101): Show a0001c0001t0003g0006 a0001c0001t0003g0011 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0042 a0001c0001t0003g0047 a0001c0001t0003g0049 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0056 a0001c0001t0003g0057 a0001c0001t0003g0059 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0067 a0001c0001t0003g0086 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0094 a0001c0001t0003g0097 a0001c0001t0003g0103 a0001c0001t0003g0112 a0001c0001t0003g0116 a0001c0001t0003g0119 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0124 a0001c0001t0003g0126 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0004g0021 a0001c0001t0004g0055 a0001c0001t0004g0065 a0001c0001t0004g0066 a0001c0001t0004g0068 a0001c0001t0004g0070 a0001c0001t0004g0072 a0001c0001t0004g0082 a0001c0001t0004g0106 a0001c0001t0004g0113 a0001c0001t0004g0115 a0001c0001t0004g0120 a0001c0001t0005g0017 a0001c0001t0005g0018 a0001c0001t0005g0048 a0001c0001t0005g0060 a0001c0001t0005g0069 a0001c0001t0005g0073 a0001c0001t0005g0074 a0001c0001t0005g0075 a0001c0001t0005g0083 a0001c0001t0005g0084 a0001c0001t0005g0085 a0001c0001t0005g0087 a0001c0001t0005g0088 a0001c0001t0005g0092 a0001c0001t0005g0093 a0001c0001t0008g0040 a0001c0001t0008g0041 a0001c0001t0008g0043 a0001c0001t0009g0044 a0001c0001t0009g0045 a0001c0001t0009g0095 a0001c0001t0014g0117 a0001c0001t0016g0118 a0002c0002t0003g0005 a0002c0002t0003g0007 a0002c0002t0003g0022 a0002c0002t0003g0054 a0002c0002t0003g0058 a0002c0002t0003g0076 a0002c0002t0003g0077 a0002c0002t0003g0078 a0002c0002t0003g0079 a0002c0002t0003g0080 a0002c0002t0003g0081 a0002c0002t0003g0096 a0002c0002t0003g0098 a0002c0002t0003g0099 a0002c0002t0003g0100 a0002c0002t0003g0101 a0002c0002t0003g0107 a0002c0002t0003g0109 a0002c0002t0003g0110 a0002c0002t0003g0111 a0002c0002t0003g0114 a0002c0002t0004g0046 a0002c0002t0004g0053 a0002c0002t0004g0102 a0002c0002t0004g0105 a0002c0002t0004g0108 a0002c0002t0015g0125 a0002c0004t0003g0104 a0003c0003t0005g0123 a0005c0006t0003g0071	124	370	0.3351	c.-51 others(3): Show c.-51C>A	GPA33	ENSG00000143167.12	transcript	ENST00000367868.4	protein_coding	1/7	chr1	TogoVar
GPALPP1_chr13_44984538_45035305	44989585	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0029 a0003c0004t0029	a0003c0004t0029g0133 a0003c0004t0029g0133	1	348	0.0029	c.-70 others(3): Show c.-70G>T	GPALPP1	ENSG00000133114.18	transcript	ENST00000379151.9	protein_coding	1/8	chr13	TogoVar
GPAT3_chr4_83531108_83610875	83536133	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02622.hp2 HG03130.hp1 HG03225.hp1 others(2): Show HG02622.hp2 HG03130.hp1 HG03225.hp1 NA18906.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0009 a0001c0001t0007 a0001c0001t0009	a0001c0001t0007g0009 a0001c0001t0007g0204 a0001c0001t0007g0205 others(2): Show a0001c0001t0007g0009 a0001c0001t0007g0204 a0001c0001t0007g0205 a0001c0001t0009g0007 a0001c0001t0009g0008	5	334	0.0150	c.-49 others(4): Show c.-490G>C	GPAT3	ENSG00000138678.11	transcript	ENST00000264409.5	protein_coding	1/12	chr4	TogoVar
GPAT4_chr8_41573200_41630001	41598365	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0041 a0001c0001t0031g0041	1	410	0.0024	c.-77 others(4): Show c.-775G>C	GPAT4	ENSG00000158669.11	transcript	ENST00000396987.7	protein_coding	2/13	chr8	TogoVar
GPAT4_chr8_41573200_41630001	41598633	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0292 a0001c0001t0015g0292	1	410	0.0024	c.-50 others(4): Show c.-507G>A	GPAT4	ENSG00000158669.11	transcript	ENST00000396987.7	protein_coding	2/13	chr8	TogoVar
GPAT4_chr8_41573200_41630001	41598791	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0055 a0001c0001t0055	a0001c0001t0055g0151 a0001c0001t0055g0151	1	410	0.0024	c.-34 others(4): Show c.-349A>T	GPAT4	ENSG00000158669.11	transcript	ENST00000396987.7	protein_coding	2/13	chr8	TogoVar
GPATCH2L_chr14_76146922_76219343	76151940	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0092 a0001c0001t0092	a0001c0001t0092g0009 a0001c0001t0092g0009	1	402	0.0025	c.-62 others(3): Show c.-62G>T	GPATCH2L	ENSG00000089916.18	transcript	ENST00000261530.12	protein_coding	1/10	chr14	TogoVar
GPATCH2_chr1_217421992_217636090	217630983	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00609.hp2 HG00738.hp2 others(93): Show HG00099.hp2 HG00609.hp2 HG00738.hp2 HG00741.hp2 HG01071.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01243.hp1 HG01243.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp2 HG01891.hp1 HG01891.hp2 HG01952.hp1 HG01993.hp2 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02135.hp1 HG02155.hp2 HG02280.hp1 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02698.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG04199.hp2 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp2 NA18906.hp1 NA18949.hp2 NA18960.hp2 NA18968.hp1 NA19043.hp1 NA19043.hp2 NA19077.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0004 a0001c0005 others(3): Show a0001c0001 a0001c0004 a0001c0005 a0001c0007 a0002c0002 a0003c0003	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(27): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0038 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0004t0008 a0001c0005t0004 a0001c0005t0009 a0001c0007t0002 a0002c0002t0008 a0002c0002t0019 a0002c0002t0039 a0003c0003t0010	a0001c0001t0002g0099 a0001c0001t0002g0103 a0001c0001t0002g0104 others(93): Show a0001c0001t0002g0099 a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0112 a0001c0001t0002g0114 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0121 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0129 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0137 a0001c0001t0002g0139 a0001c0001t0002g0148 a0001c0001t0002g0150 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0161 a0001c0001t0002g0164 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0184 a0001c0001t0004g0102 a0001c0001t0004g0111 a0001c0001t0004g0113 a0001c0001t0004g0120 a0001c0001t0004g0126 a0001c0001t0004g0127 a0001c0001t0004g0130 a0001c0001t0004g0152 a0001c0001t0004g0154 a0001c0001t0004g0163 a0001c0001t0004g0179 a0001c0001t0006g0100 a0001c0001t0006g0107 a0001c0001t0006g0128 a0001c0001t0006g0133 a0001c0001t0006g0136 a0001c0001t0006g0143 a0001c0001t0006g0146 a0001c0001t0006g0165 a0001c0001t0006g0173 a0001c0001t0006g0180 a0001c0001t0008g0096 a0001c0001t0009g0098 a0001c0001t0009g0105 a0001c0001t0009g0178 a0001c0001t0009g0187 a0001c0001t0010g0134 a0001c0001t0011g0138 a0001c0001t0011g0141 a0001c0001t0011g0149 a0001c0001t0011g0166 a0001c0001t0015g0153 a0001c0001t0015g0175 a0001c0001t0015g0176 a0001c0001t0017g0101 a0001c0001t0017g0116 a0001c0001t0018g0185 a0001c0001t0018g0186 a0001c0001t0020g0109 a0001c0001t0020g0160 a0001c0001t0021g0106 a0001c0001t0021g0177 a0001c0001t0022g0182 a0001c0001t0022g0183 a0001c0001t0023g0002 a0001c0001t0024g0003 a0001c0001t0025g0001 a0001c0001t0038g0110 a0001c0001t0040g0135 a0001c0001t0041g0181 a0001c0001t0042g0174 a0001c0001t0043g0142 a0001c0001t0044g0115 a0001c0004t0008g0097 a0001c0004t0008g0108 a0001c0004t0008g0119 a0001c0005t0004g0144 a0001c0005t0009g0145 a0001c0007t0002g0147 a0002c0002t0008g0156 a0002c0002t0019g0155 a0002c0002t0019g0172 a0002c0002t0039g0162 a0003c0003t0010g0140 a0003c0003t0010g0151 a0003c0003t0010g0167 a0003c0003t0010g0188	96	188	0.5106	c.-12 others(3): Show c.-12C>T	GPATCH2	ENSG00000092978.11	transcript	ENST00000366935.8	protein_coding	1/10	chr1	TogoVar
GPBAR1_chr2_218256015_218268861	218262686	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01891.hp2 HG02055.hp1 HG02257.hp2 others(7): Show HG01891.hp2 HG02055.hp1 HG02257.hp2 HG02280.hp1 HG02647.hp2 HG02965.hp1 HG03540.hp2 NA18522.hp2 NA19030.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0002 a0001c0001t0004g0002	10	406	0.0246	c.-39 others(3): Show c.-39C>T	GPBAR1	ENSG00000179921.15	transcript	ENST00000519574.2	protein_coding	2/2	chr2	TogoVar
GPBP1L1_chr1_45622304_45691533	45660308	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19054.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0209 a0001c0001t0013g0209	1	292	0.0034	c.-18 others(4): Show c.-180G>A	GPBP1L1	ENSG00000159592.11	transcript	ENST00000355105.8	protein_coding	3/13	chr1	TogoVar
GPBP1L1_chr1_45622304_45691533	45660507	T T	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00642.hp1 HG01123.hp1 HG01168.hp1 others(4): Show HG00642.hp1 HG01123.hp1 HG01168.hp1 HG01361.hp1 HG03490.hp1 HG03492.hp1 HG03704.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0043 a0001c0002t0005g0054 a0001c0002t0005g0055 others(4): Show a0001c0002t0005g0043 a0001c0002t0005g0054 a0001c0002t0005g0055 a0001c0002t0005g0056 a0001c0002t0005g0057 a0001c0002t0005g0058 a0001c0002t0005g0059	7	292	0.0240	c.-37 others(4): Show c.-379A>T	GPBP1L1	ENSG00000159592.11	transcript	ENST00000355105.8	protein_coding	3/13	chr1	TogoVar
GPC1_chr2_240430663_240473076	240435740	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0035 a0001c0004t0035	a0001c0004t0035g0300 a0001c0004t0035g0300	1	398	0.0025	c.-17 others(4): Show c.-179C>T	GPC1	ENSG00000063660.9	transcript	ENST00000264039.7	protein_coding	1/9	chr2	TogoVar
GPC4_chrX_133295103_133420489	133415110	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19076.hp1 NA19076.hp1	a0006 a0006	a0006c0003 a0006c0003	a0006c0003t0024 a0006c0003t0024	a0006c0003t0024g0218 a0006c0003t0024g0218	1	221	0.0045	c.-14 others(4): Show c.-145C>A	GPC4	ENSG00000076716.9	transcript	ENST00000370828.4	protein_coding	1/9	chrX	TogoVar
GPC4_chrX_133295103_133420489	133415426	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0219 a0001c0001t0025g0219	1	221	0.0045	c.-46 others(4): Show c.-461C>T	GPC4	ENSG00000076716.9	transcript	ENST00000370828.4	protein_coding	1/9	chrX	TogoVar
GPC5_chr13_91393621_92872237	91398947	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02280.hp2 HG02280.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0026 a0002c0002t0004g0026	1	42	0.0238	c.-10 others(4): Show c.-100C>T	GPC5	ENSG00000179399.16	transcript	ENST00000377067.9	protein_coding	1/8	chr13	TogoVar
GPCPD1_chr20_5539439_5616006	5610908	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG04199.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0050 a0001c0001t0050	a0001c0001t0050g0379 a0001c0001t0050g0379	1	386	0.0026	c.-95 others(3): Show c.-95C>G	GPCPD1	ENSG00000125772.14	transcript	ENST00000379019.7	protein_coding	1/20	chr20	TogoVar
GPHA2_chr11_64929471_64940893	64935859	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0019 a0001c0001t0005g0019	1	428	0.0023	c.-26 others(3): Show c.-26C>T	GPHA2	ENSG00000149735.7	transcript	ENST00000279168.7	protein_coding	1/4	chr11	TogoVar
GPHN_chr14_66503147_67186803	66508504	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01928.hp2 HG01928.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0045 a0001c0001t0014g0045	1	234	0.0043	c.-24 others(3): Show c.-24A>T	GPHN	ENSG00000171723.16	transcript	ENST00000478722.6	protein_coding	1/23	chr14	TogoVar
GPR101_chrX_137018929_137038995	137033910	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01496.hp1 HG01891.hp1 HG01891.hp2 others(15): Show HG01496.hp1 HG01891.hp1 HG01891.hp2 HG02015.hp1 HG02135.hp1 HG02257.hp1 HG02451.hp2 HG02647.hp1 HG02809.hp1 HG02896.hp2 HG03041.hp2 HG03098.hp1 HG03195.hp1 HG03225.hp1 HG03540.hp1 HG06807.hp2 NA18747.hp1 NA19240.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0005 a0004c0004t0009 a0004c0004t0005 a0004c0004t0009	a0004c0004t0005g0005 a0004c0004t0009g0011 a0004c0004t0005g0005 a0004c0004t0009g0011	18	306	0.0588	c.-20 others(4): Show c.-201C>T	GPR101	ENSG00000165370.3	transcript	ENST00000651716.2	protein_coding	1/2	chrX	TogoVar
GPR107_chr9_130048906_130145164	130053911	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02258.hp2 HG02630.hp2 HG02886.hp2 others(3): Show HG02258.hp2 HG02630.hp2 HG02886.hp2 HG03225.hp1 HG03453.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0023 a0001c0001t0046 a0001c0001t0016 a0001c0001t0023 a0001c0001t0046	a0001c0001t0016g0027 a0001c0001t0016g0028 a0001c0001t0016g0030 others(3): Show a0001c0001t0016g0027 a0001c0001t0016g0028 a0001c0001t0016g0030 a0001c0001t0023g0029 a0001c0001t0023g0240 a0001c0001t0046g0241	6	306	0.0196	c.-22 others(3): Show c.-22G>T	GPR107	ENSG00000148358.21	transcript	ENST00000347136.11	protein_coding	1/18	chr9	TogoVar
GPR119_chrX_130374449_130390674	130385521	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0045 a0001c0001t0033g0045	1	302	0.0033	c.-74 others(3): Show c.-74C>T	GPR119	ENSG00000147262.5	transcript	ENST00000682440.1	protein_coding	1/2	chrX	TogoVar
GPR132_chr14_105044395_105070430	105055814	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0058 a0001c0001t0029g0058	1	406	0.0025	c.-39 others(4): Show c.-394C>T	GPR132	ENSG00000183484.12	transcript	ENST00000329797.8	protein_coding	3/4	chr14	TogoVar

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