Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
ABCB10_chr1_229511582_229563707	229512473	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03486.hp2 NA21309.hp2 HG03486.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0043 a0001c0002t0001g0044	2	284	0.0070	0	c.57 others(5): Show c.5706C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	4109	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229512508	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01261.hp2 HG01884.hp2 HG01891.hp2 others(5): Show HG01261.hp2 HG01884.hp2 HG01891.hp2 HG02145.hp1 HG03579.hp1 NA19030.hp1 NA19043.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 others(5): Show a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 a0001c0002t0004g0109 a0001c0002t0004g0110 a0001c0002t0004g0111 a0001c0002t0004g0112 a0001c0002t0004g0113	8	284	0.0282	0	c.56 others(5): Show c.5671C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	4074	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229512526	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01516.hp2 HG02040.hp1 others(28): Show HG01243.hp1 HG01516.hp2 HG02040.hp1 HG02109.hp1 HG02257.hp1 HG02258.hp2 HG02280.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02717.hp2 HG02723.hp1 HG02809.hp2 HG02886.hp1 HG02965.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03516.hp1 HG03579.hp2 NA18906.hp2 NA19240.hp1 NA20129.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0002 a0002c0003 a0002c0009 others(2): Show a0001c0002 a0002c0003 a0002c0009 a0002c0010 a0007c0008	a0001c0002t0001 a0001c0002t0003 a0002c0003t0003 others(4): Show a0001c0002t0001 a0001c0002t0003 a0002c0003t0003 a0002c0003t0007 a0002c0009t0003 a0002c0010t0009 a0007c0008t0003	a0001c0002t0001g0036 a0001c0002t0001g0045 a0001c0002t0001g0046 others(28): Show a0001c0002t0001g0036 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0052 a0001c0002t0003g0035 a0001c0002t0003g0053 a0001c0002t0003g0118 a0002c0003t0003g0016 a0002c0003t0003g0017 a0002c0003t0003g0018 a0002c0003t0003g0019 a0002c0003t0003g0020 a0002c0003t0003g0021 a0002c0003t0003g0022 a0002c0003t0003g0023 a0002c0003t0003g0028 a0002c0003t0003g0030 a0002c0003t0003g0031 a0002c0003t0003g0032 a0002c0003t0003g0033 a0002c0003t0007g0024 a0002c0003t0007g0025 a0002c0009t0003g0029 a0002c0010t0009g0034 a0007c0008t0003g0026 a0007c0008t0003g0027	31	284	0.1092	0	c.56 others(5): Show c.5653A>G	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	4056	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229512573	A A	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0133 a0001c0001t0001g0133	1	284	0.0035	0	c.56 others(5): Show c.5606T>G	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	4009	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229512736	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02148.hp2 HG02148.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0194 a0001c0001t0001g0194	1	284	0.0035	0	c.54 others(5): Show c.5443G>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3846	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229512770	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03225.hp1 NA20300.hp1 HG03225.hp1 NA20300.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0010 a0004c0005t0005g0011 a0004c0005t0005g0010 a0004c0005t0005g0011	2	284	0.0070	0	c.54 others(5): Show c.5409C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3812	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229512929	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp1 HG02451.hp1 HG03225.hp1 others(2): Show HG01106.hp1 HG02451.hp1 HG03225.hp1 HG03471.hp2 NA20300.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0010 a0004c0005t0005g0011 a0004c0005t0005g0012 others(2): Show a0004c0005t0005g0010 a0004c0005t0005g0011 a0004c0005t0005g0012 a0004c0005t0005g0013 a0004c0005t0005g0014	5	284	0.0176	0	c.52 others(5): Show c.5250C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3653	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513175	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0142 a0001c0001t0001g0142	1	284	0.0035	0	c.50 others(5): Show c.5004T>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3407	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513177	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01261.hp2 HG01884.hp2 HG01891.hp2 others(7): Show HG01261.hp2 HG01884.hp2 HG01891.hp2 HG02145.hp1 HG02895.hp1 HG02897.hp1 HG03579.hp1 NA19030.hp1 NA19043.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0008 a0001c0002t0004 a0001c0002t0008	a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 others(7): Show a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 a0001c0002t0004g0109 a0001c0002t0004g0110 a0001c0002t0004g0111 a0001c0002t0004g0112 a0001c0002t0004g0113 a0001c0002t0008g0098 a0001c0002t0008g0099	10	284	0.0352	0	c.50 others(5): Show c.5002T>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3405	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513180	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp1 HG02976.hp1 HG03041.hp2 others(1): Show HG02630.hp1 HG02976.hp1 HG03041.hp2 HG03486.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0003 a0002c0003t0003 a0001c0002t0003 a0002c0003t0003	a0001c0002t0003g0118 a0002c0003t0003g0031 a0002c0003t0003g0032 others(1): Show a0001c0002t0003g0118 a0002c0003t0003g0031 a0002c0003t0003g0032 a0002c0003t0003g0033	4	284	0.0141	0	c.49 others(5): Show c.4999A>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3402	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513184	ATAG ATAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp1 HG02451.hp1 HG03471.hp2 HG01106.hp1 HG02451.hp1 HG03471.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0012 a0004c0005t0005g0013 a0004c0005t0005g0014 a0004c0005t0005g0012 a0004c0005t0005g0013 a0004c0005t0005g0014	3	284	0.0106	-3	c.49 others(14): Show c.4992_*4994delCTA	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3397	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513381	G G	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03225.hp1 NA20300.hp1 HG03225.hp1 NA20300.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0010 a0004c0005t0005g0011 a0004c0005t0005g0010 a0004c0005t0005g0011	2	284	0.0070	0	c.47 others(5): Show c.4798C>G	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3201	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513425	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0015 a0004c0005t0005g0015	1	284	0.0035	0	c.47 others(5): Show c.4754G>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3157	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513441	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG01167.hp1 HG01261.hp1 others(11): Show HG01123.hp1 HG01167.hp1 HG01261.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02004.hp1 HG02300.hp1 HG03130.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0002 a0003c0013 a0004c0005 a0001c0002 a0003c0013 a0004c0005	a0001c0002t0002 a0003c0013t0002 a0004c0005t0005 a0001c0002t0002 a0003c0013t0002 a0004c0005t0005	a0001c0002t0002g0001 a0001c0002t0002g0004 a0001c0002t0002g0061 others(8): Show a0001c0002t0002g0001 a0001c0002t0002g0004 a0001c0002t0002g0061 a0001c0002t0002g0066 a0001c0002t0002g0072 a0001c0002t0002g0075 a0001c0002t0002g0077 a0001c0002t0002g0082 a0001c0002t0002g0097 a0003c0013t0002g0261 a0004c0005t0005g0015	14	284	0.0493	0	c.47 others(5): Show c.4738G>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	3141	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513625	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00438.hp1 others(68): Show HG00099.hp2 HG00140.hp1 HG00438.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG01071.hp2 HG01074.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp2 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01358.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02074.hp2 HG02080.hp2 HG02132.hp1 HG02145.hp1 HG02300.hp1 HG02451.hp1 HG02698.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG03130.hp2 HG03225.hp1 HG03471.hp2 HG03579.hp1 HG03669.hp1 HG03710.hp2 HG03942.hp1 HG04199.hp1 HG04204.hp1 NA18747.hp1 NA18952.hp2 NA18954.hp1 NA18967.hp2 NA18968.hp1 NA18977.hp2 NA18980.hp2 NA18989.hp1 NA18991.hp1 NA18998.hp1 NA19030.hp1 NA19043.hp2 NA19054.hp2 NA19060.hp1 NA19079.hp1 NA19082.hp1 NA19085.hp2 NA19087.hp1 NA19240.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0006	a0001c0002 a0003c0013 a0004c0005 others(1): Show a0001c0002 a0003c0013 a0004c0005 a0006c0007	a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 others(3): Show a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 a0003c0013t0002 a0004c0005t0005 a0006c0007t0002	a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0004 others(64): Show a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0004 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0058 a0001c0002t0002g0061 a0001c0002t0002g0062 a0001c0002t0002g0064 a0001c0002t0002g0065 a0001c0002t0002g0066 a0001c0002t0002g0067 a0001c0002t0002g0068 a0001c0002t0002g0069 a0001c0002t0002g0070 a0001c0002t0002g0071 a0001c0002t0002g0072 a0001c0002t0002g0073 a0001c0002t0002g0074 a0001c0002t0002g0075 a0001c0002t0002g0076 a0001c0002t0002g0077 a0001c0002t0002g0078 a0001c0002t0002g0079 a0001c0002t0002g0080 a0001c0002t0002g0081 a0001c0002t0002g0082 a0001c0002t0002g0083 a0001c0002t0002g0084 a0001c0002t0002g0085 a0001c0002t0002g0086 a0001c0002t0002g0087 a0001c0002t0002g0088 a0001c0002t0002g0089 a0001c0002t0002g0090 a0001c0002t0002g0091 a0001c0002t0002g0092 a0001c0002t0002g0093 a0001c0002t0002g0094 a0001c0002t0002g0095 a0001c0002t0002g0096 a0001c0002t0002g0097 a0001c0002t0002g0100 a0001c0002t0002g0101 a0001c0002t0002g0114 a0001c0002t0002g0115 a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 a0001c0002t0004g0109 a0001c0002t0004g0110 a0001c0002t0004g0111 a0001c0002t0004g0112 a0001c0002t0004g0113 a0001c0002t0008g0098 a0001c0002t0008g0099 a0003c0013t0002g0261 a0004c0005t0005g0010 a0004c0005t0005g0011 a0004c0005t0005g0012 a0004c0005t0005g0013 a0004c0005t0005g0014 a0004c0005t0005g0015 a0006c0007t0002g0059 a0006c0007t0002g0060 a0006c0007t0002g0063	71	284	0.2500	0	c.45 others(5): Show c.4554A>G	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2957	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513712	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0190	1	284	0.0035	0	c.44 others(5): Show c.4467C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2870	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513743	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02258.hp2 HG02622.hp2 others(4): Show HG02257.hp1 HG02258.hp2 HG02622.hp2 HG02809.hp2 HG02886.hp1 HG03139.hp2 HG03225.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0036 a0001c0002t0001g0045 a0001c0002t0001g0048 others(4): Show a0001c0002t0001g0036 a0001c0002t0001g0045 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0052	7	284	0.0247	0	c.44 others(5): Show c.4436G>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2839	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513813	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	284	0.0035	0	c.43 others(5): Show c.4366T>C	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2769	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513829	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01261.hp2 HG01884.hp2 HG01891.hp2 others(7): Show HG01261.hp2 HG01884.hp2 HG01891.hp2 HG02145.hp1 HG02895.hp1 HG02897.hp1 HG03579.hp1 NA19030.hp1 NA19043.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0008 a0001c0002t0004 a0001c0002t0008	a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 others(7): Show a0001c0002t0004g0106 a0001c0002t0004g0107 a0001c0002t0004g0108 a0001c0002t0004g0109 a0001c0002t0004g0110 a0001c0002t0004g0111 a0001c0002t0004g0112 a0001c0002t0004g0113 a0001c0002t0008g0098 a0001c0002t0008g0099	10	284	0.0352	0	c.43 others(5): Show c.4350G>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2753	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513887	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	284	0.0035	0	c.42 others(5): Show c.4292T>C	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2695	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513914	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0015 a0004c0005t0005g0015	1	284	0.0035	0	c.42 others(5): Show c.4265C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2668	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513939	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0053 a0001c0002t0003g0053	1	284	0.0035	0	c.42 others(5): Show c.4240G>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2643	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229513945	C C	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp2 HG01255.hp2 HG01192.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0257 a0001c0001t0001g0258	2	284	0.0070	0	c.42 others(5): Show c.4234G>C	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2637	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514230	A A	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0015 a0004c0005t0005g0015	1	284	0.0035	0	c.39 others(5): Show c.3949T>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2352	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514399	CAT CAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00673.hp1 HG00738.hp2 others(28): Show HG00438.hp2 HG00673.hp1 HG00738.hp2 HG01074.hp2 HG01109.hp2 HG01433.hp1 HG01516.hp1 HG01943.hp2 HG01981.hp1 HG02257.hp2 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03491.hp2 HG03492.hp1 HG03654.hp2 HG03710.hp1 HG04115.hp1 HG04204.hp2 NA18612.hp1 NA18747.hp2 NA18948.hp1 NA18950.hp2 NA18962.hp2 NA18967.hp1 NA18991.hp2 NA18993.hp1 NA19006.hp1 NA19091.hp1 NA20300.hp2 NA21309.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0006 a0001c0001 a0005c0006	a0001c0001t0001 a0001c0001t0006 a0005c0006t0001 a0001c0001t0001 a0001c0001t0006 a0005c0006t0001	a0001c0001t0001g0007 a0001c0001t0001g0116 a0001c0001t0001g0119 others(26): Show a0001c0001t0001g0007 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0175 a0001c0001t0001g0186 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0207 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0219 a0001c0001t0006g0146 a0001c0001t0006g0147 a0001c0001t0006g0148 a0001c0001t0006g0206 a0005c0006t0001g0008	31	284	0.1092	-2	c.37 others(13): Show c.3778_*3779delAT	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2182	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514418	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp1 NA18522.hp1 HG02615.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0122 a0001c0001t0001g0123	2	284	0.0070	0	c.37 others(5): Show c.3761G>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2164	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514467	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0009 a0002c0010t0009	a0002c0010t0009g0034 a0002c0010t0009g0034	1	284	0.0035	0	c.37 others(5): Show c.3712C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	2115	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514775	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0001 a0001c0012t0001	a0001c0012t0001g0039 a0001c0012t0001g0039	1	284	0.0035	0	c.34 others(5): Show c.3404C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	1807	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514794	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0035 a0001c0002t0003g0035	1	284	0.0035	0	c.33 others(5): Show c.3385A>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	1788	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514852	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0127	1	284	0.0035	0	c.33 others(5): Show c.3327T>C	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	1730	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514888	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0035 a0001c0002t0003g0035	1	284	0.0035	0	c.32 others(5): Show c.3291C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	1694	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229514933	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0015 a0004c0005t0005g0015	1	284	0.0035	0	c.32 others(5): Show c.3246A>G	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	1649	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229515358	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02965.hp1 HG03041.hp1 others(4): Show HG02280.hp1 HG02965.hp1 HG03041.hp1 HG03098.hp1 HG03471.hp1 HG03579.hp2 NA19240.hp1	a0002 a0007 a0002 a0007	a0002c0003 a0002c0010 a0007c0008 a0002c0003 a0002c0010 a0007c0008	a0002c0003t0003 a0002c0003t0007 a0002c0010t0009 others(1): Show a0002c0003t0003 a0002c0003t0007 a0002c0010t0009 a0007c0008t0003	a0002c0003t0003g0023 a0002c0003t0003g0028 a0002c0003t0007g0024 others(4): Show a0002c0003t0003g0023 a0002c0003t0003g0028 a0002c0003t0007g0024 a0002c0003t0007g0025 a0002c0010t0009g0034 a0007c0008t0003g0026 a0007c0008t0003g0027	7	284	0.0247	0	c.28 others(5): Show c.2821A>C	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	1224	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229515539	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02083.hp2 HG02083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0179	1	284	0.0035	0	c.26 others(5): Show c.2640C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	1043	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229515633	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0035 a0001c0002t0003g0035	1	284	0.0035	0	c.25 others(5): Show c.2546C>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	949	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229515767	G G	GA GA	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG02809.hp1 HG02886.hp2 others(7): Show HG02647.hp1 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG03098.hp2 HG03195.hp1 HG03486.hp2 HG03540.hp2 HG06807.hp1 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0012 a0001c0016 a0001c0002 a0001c0012 a0001c0016	a0001c0002t0001 a0001c0012t0001 a0001c0016t0001 a0001c0002t0001 a0001c0012t0001 a0001c0016t0001	a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0040 others(7): Show a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0044 a0001c0002t0001g0054 a0001c0012t0001g0039 a0001c0016t0001g0273	10	284	0.0352	1	c.24 others(12): Show c.2411_*2412insT	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	814	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229515833	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	284	0.0035	0	c.23 others(5): Show c.2346G>A	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	749	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229516082	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0005	a0004c0005t0005g0015 a0004c0005t0005g0015	1	284	0.0035	0	c.20 others(5): Show c.2097A>G	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	500	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229516293	C C	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0265 a0003c0004t0001g0265	1	284	0.0035	0	c.18 others(5): Show c.1886G>T	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	289	chr1	TogoVar
ABCB10_chr1_229511582_229563707	229516342	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0065 a0001c0002t0002g0065	1	284	0.0035	0	c.18 others(5): Show c.1837A>C	ABCB10	ENSG00000135776.5	transcript	ENST00000344517.5	protein_coding	240	chr1	TogoVar
ABCB11_chr2_168915781_169036324	168915994	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18994.hp2 NA19007.hp1 NA18994.hp2 NA19007.hp1	a0002 a0013 a0002 a0013	a0002c0003 a0013c0040 a0002c0003 a0013c0040	a0002c0003t0001 a0013c0040t0001 a0002c0003t0001 a0013c0040t0001	a0002c0003t0001g0264 a0013c0040t0001g0259 a0002c0003t0001g0264 a0013c0040t0001g0259	2	306	0.0065	0	c.76 others(5): Show c.7628T>C	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	4787	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916069	T T	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp2 HG02451.hp1 HG02486.hp2 others(12): Show HG02055.hp2 HG02451.hp1 HG02486.hp2 HG02976.hp2 HG03130.hp2 HG03139.hp2 HG03209.hp2 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG06807.hp1 NA18906.hp1 NA19030.hp2 NA20129.hp2 NA20300.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0016 a0001c0039 others(6): Show a0001c0002 a0001c0016 a0001c0039 a0001c0062 a0002c0020 a0002c0025 a0002c0027 a0002c0052 a0003c0018	a0001c0002t0004 a0001c0002t0006 a0001c0016t0008 others(8): Show a0001c0002t0004 a0001c0002t0006 a0001c0016t0008 a0001c0039t0008 a0001c0062t0004 a0002c0020t0008 a0002c0020t0037 a0002c0025t0008 a0002c0027t0006 a0002c0052t0026 a0003c0018t0036	a0001c0002t0004g0134 a0001c0002t0004g0187 a0001c0002t0004g0192 others(12): Show a0001c0002t0004g0134 a0001c0002t0004g0187 a0001c0002t0004g0192 a0001c0002t0006g0177 a0001c0002t0006g0196 a0001c0002t0006g0215 a0001c0016t0008g0295 a0001c0039t0008g0301 a0001c0062t0004g0227 a0002c0020t0008g0233 a0002c0020t0037g0026 a0002c0025t0008g0225 a0002c0027t0006g0222 a0002c0052t0026g0219 a0003c0018t0036g0224	15	306	0.0490	0	c.75 others(5): Show c.7553A>G	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	4712	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916130	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp2 HG02258.hp2 HG02486.hp1 others(7): Show HG02257.hp2 HG02258.hp2 HG02486.hp1 HG02572.hp2 HG02647.hp2 HG02896.hp1 HG02965.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0007 a0016	a0001c0002 a0001c0048 a0002c0004 others(5): Show a0001c0002 a0001c0048 a0002c0004 a0002c0012 a0004c0009 a0007c0044 a0007c0053 a0016c0057	a0001c0002t0007 a0001c0048t0007 a0002c0004t0007 others(5): Show a0001c0002t0007 a0001c0048t0007 a0002c0004t0007 a0002c0012t0007 a0004c0009t0007 a0007c0044t0007 a0007c0053t0016 a0016c0057t0016	a0001c0002t0007g0131 a0001c0002t0007g0249 a0001c0048t0007g0017 others(7): Show a0001c0002t0007g0131 a0001c0002t0007g0249 a0001c0048t0007g0017 a0002c0004t0007g0021 a0002c0004t0007g0087 a0002c0012t0007g0010 a0004c0009t0007g0094 a0007c0044t0007g0086 a0007c0053t0016g0059 a0016c0057t0016g0093	10	306	0.0327	0	c.74 others(5): Show c.7492G>A	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	4651	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916462	C C	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0016 a0001c0016	a0001c0016t0008 a0001c0016t0008	a0001c0016t0008g0295 a0001c0016t0008g0295	1	306	0.0033	0	c.71 others(5): Show c.7160G>A	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	4319	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916636	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp2 NA18939.hp1 NA18943.hp1 others(2): Show HG00558.hp2 NA18939.hp1 NA18943.hp1 NA18987.hp2 NA19007.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0003 a0001c0001 a0001c0005 a0002c0003	a0001c0001t0001 a0001c0005t0001 a0002c0003t0001 a0001c0001t0001 a0001c0005t0001 a0002c0003t0001	a0001c0001t0001g0124 a0001c0001t0001g0189 a0001c0005t0001g0105 others(2): Show a0001c0001t0001g0124 a0001c0001t0001g0189 a0001c0005t0001g0105 a0001c0005t0001g0208 a0002c0003t0001g0271	5	306	0.0163	0	c.69 others(5): Show c.6986C>T	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	4145	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916664	G G	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp2 HG02486.hp2 HG02976.hp2 others(6): Show HG02055.hp2 HG02486.hp2 HG02976.hp2 HG03139.hp2 HG03209.hp2 HG06807.hp1 NA19030.hp2 NA20129.hp2 NA20300.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0016 a0001c0039 others(5): Show a0001c0002 a0001c0016 a0001c0039 a0002c0020 a0002c0025 a0002c0027 a0002c0052 a0003c0018	a0001c0002t0006 a0001c0016t0008 a0001c0039t0008 others(6): Show a0001c0002t0006 a0001c0016t0008 a0001c0039t0008 a0002c0020t0008 a0002c0020t0037 a0002c0025t0008 a0002c0027t0006 a0002c0052t0026 a0003c0018t0036	a0001c0002t0006g0177 a0001c0016t0008g0295 a0001c0039t0008g0301 others(6): Show a0001c0002t0006g0177 a0001c0016t0008g0295 a0001c0039t0008g0301 a0002c0020t0008g0233 a0002c0020t0037g0026 a0002c0025t0008g0225 a0002c0027t0006g0222 a0002c0052t0026g0219 a0003c0018t0036g0224	9	306	0.0294	0	c.69 others(5): Show c.6958C>T	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	4117	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916693	G G	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18944.hp2 NA18944.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0029 a0002c0003t0029	a0002c0003t0029g0082 a0002c0003t0029g0082	1	306	0.0033	0	c.69 others(5): Show c.6929C>G	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	4088	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916828	T T	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01099.hp1 HG01433.hp2 HG01099.hp1 HG01433.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0267 a0002c0003t0001g0035 a0001c0001t0001g0267 a0002c0003t0001g0035	2	306	0.0065	0	c.67 others(5): Show c.6794A>C	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	3953	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916882	A A	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19003.hp1 NA19064.hp2 NA19003.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0234 a0001c0001t0001g0253 a0001c0001t0001g0234 a0001c0001t0001g0253	2	306	0.0065	0	c.67 others(5): Show c.6740T>C	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	3899	chr2	TogoVar
ABCB11_chr2_168915781_169036324	168916931	T T	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0130 a0001c0002t0003g0130	1	306	0.0033	0	c.66 others(5): Show c.6691A>T	ABCB11	ENSG00000073734.10	transcript	ENST00000650372.1	protein_coding	3850	chr2	TogoVar

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