regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PLK5_chr19_1519077_1541046 | 1531737 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG01106.hp2 HG01192.hp2 HG02145.hp2 others(3): Show |
a0004a0005 | a0004c0004a0005c0006 | a0004c0004t0063a0005c0006t0025a0005c0006t0036others(1): Show | a0004c0004t0063g0324a0005c0006t0025g0044a0005c0006t0025g0323others(2): Show | 6 | 430 | 0.0140 | 0 | c.569 others(5): Show |
PLK5 | ENSG00000185988.15 | transcript | ENST00000454744.7 | protein_coding | 11/13 | chr19 | TogoVar | ||||||
POMK_chr8_43088515_43128434 | 43097519 | TAAAG | T | splice_acceptor_variant others(2): Show |
HIGH | HG01192.hp1 HG01884.hp1 HG01884.hp2 others(5): Show |
a0001 | a0001c0001a0001c0008 | a0001c0001t0002a0001c0008t0002 | a0001c0001t0002g0015a0001c0001t0002g0065a0001c0001t0002g0066others(3): Show | 8 | 276 | 0.0290 | -4 | c.-20 others(15): Show |
POMK | ENSG00000185900.11 | transcript | ENST00000331373.10 | protein_coding | 2/5 | 6023 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||
POMZP3_chr7_76604986_76632279 | 76611468 | CA | C | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(209): Show |
a0000 | a0000c0002a0000c0004a0000c0005others(6): Show | a0000c0002t0002a0000c0002t0003a0000c0002t0004others(25): Show | a0000c0002t0002g0003a0000c0002t0002g0007a0000c0002t0002g0014others(183): Show | 212 | 423 | 0.5012 | -1 | c.560 others(4): Show |
p.Leu others(5): Show |
POMZP3 | ENSG00000146707.15 | transcript | ENST00000310842.9 | protein_coding | 6/7 | 1283/1528 | 560/564 | 187/187 | chr7 | TogoVar | ||
POU3F2_chr6_98829574_98844458 | 98835104 | C | CG | frameshift_variant | HIGH | HG00408.hp1 HG00597.hp1 HG00597.hp2 others(44): Show |
a0002 | a0002c0002a0002c0004 | a0002c0002t0001a0002c0002t0002a0002c0002t0004others(7): Show | a0002c0002t0001g0000a0002c0002t0002g0000a0002c0002t0004g0000others(7): Show | 47 | 436 | 0.1078 | 1 | c.239 others(4): Show |
p.Gly others(4): Show |
POU3F2 | ENSG00000184486.10 | transcript | ENST00000328345.8 | protein_coding | 1/1 | 540/4885 | 240/1332 | 80/443 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
PRAMEF33_chr1_13298539_13313907 | 13307108 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(242): Show |
a0001a0003a0022others(2): Show | a0001c0001a0001c0003a0001c0005others(31): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0002others(36): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0034others(62): Show | 245 | 417 | 0.5875 | 0 | c.758 others(3): Show |
p.Trp others(4): Show |
PRAMEF33 | ENSG00000237700.2 | transcript | ENST00000437300.2 | protein_coding | 3/4 | 831/1518 | 758/1425 | 253/474 | chr1 | TogoVar | ||
PRB4_chr12_11302077_11315436 | 11308868 | G | A | stop_gained | HIGH | HG00099.hp2 HG00733.hp2 HG01069.hp1 others(13): Show |
a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0007a0005c0005t0001g0047 | 16 | 451 | 0.0355 | 0 | c.115 others(3): Show |
p.Arg others(3): Show |
PRB4 | ENSG00000230657.8 | transcript | ENST00000279575.7 | protein_coding | 3/4 | 153/923 | 115/744 | 39/247 | chr12 | TogoVar | ||
PRPF3_chr1_150316533_150358233 | 150324880 | C | CTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00438.hp1 HG00639.hp2 HG00733.hp1 others(49): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007a0001c0001t0001g0014a0001c0001t0001g0022others(48): Show | 52 | 362 | 0.1437 | 3 | c.-48 others(14): Show |
PRPF3 | ENSG00000117360.13 | transcript | ENST00000324862.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PRPF3_chr1_150316533_150358233 | 150324880 | C | CTTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(303): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(297): Show | 306 | 362 | 0.8453 | 4 | c.-48 others(15): Show |
PRPF3 | ENSG00000117360.13 | transcript | ENST00000324862.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PRR14_chr16_30645960_30661413 | 30655092 | A | AC | frameshift_variant | HIGH | HG00438.hp1 HG01192.hp1 HG02056.hp2 others(6): Show |
a0004a0005a0007 | a0004c0005a0004c0009a0005c0007others(1): Show | a0004c0005t0001a0004c0009t0001a0005c0007t0001others(1): Show | a0004c0005t0001g0001a0004c0005t0001g0005a0004c0005t0001g0016others(3): Show | 9 | 296 | 0.0304 | 1 | c.112 others(5): Show |
p.Arg others(5): Show |
PRR14 | ENSG00000156858.12 | transcript | ENST00000300835.9 | protein_coding | 8/12 | 1346/2078 | 1128/1758 | 376/585 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
PRRG3_chrX_151690458_151710924 | 151700907 | T | TC | frameshift_variant | HIGH | HG01192.hp1 HG01978.hp1 |
a0005 | a0005c0006 | a0005c0006t0001a0005c0006t0003 | a0005c0006t0001g0006a0005c0006t0003g0006 | 2 | 336 | 0.0060 | 1 | c.576 others(4): Show |
p.Ser others(5): Show |
PRRG3 | ENSG00000130032.17 | transcript | ENST00000674457.1 | protein_coding | 4/4 | 695/5705 | 577/696 | 193/231 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PSG1_chr19_42861464_42884713 | 42868882 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00323.hp2 others(15): Show |
a0004a0006a0023 | a0004c0005a0006c0007a0023c0035 | a0004c0005t0001a0006c0007t0001a0023c0035t0001 | a0004c0005t0001g0037a0004c0005t0001g0038a0004c0005t0001g0096others(11): Show | 18 | 408 | 0.0441 | 0 | c.862 others(3): Show |
p.Arg others(4): Show |
PSG1 | ENSG00000231924.10 | transcript | ENST00000436291.7 | protein_coding | 4/6 | 994/2062 | 862/1260 | 288/419 | chr19 | TogoVar | ||
PSG7_chr19_42919132_42942207 | 42935542 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(373): Show |
a0001a0005a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(319): Show | 376 | 416 | 0.9039 | 0 | c.292 others(3): Show |
p.Arg others(3): Show |
PSG7 | ENSG00000221878.13 | transcript | ENST00000406070.7 | protein_coding | 2/6 | 423/2067 | 292/1260 | 98/419 | chr19 | TogoVar | ||
PSORS1C1_chr6_31109800_31145092 | 31138723 | TC | T | frameshift_variant | HIGH | HG00639.hp2 HG00642.hp1 HG00733.hp1 others(31): Show |
a0003 | a0003c0003a0003c0009 | a0003c0003t0004a0003c0003t0009a0003c0003t0011others(5): Show | a0003c0003t0004g0058a0003c0003t0004g0059a0003c0003t0004g0215others(23): Show | 34 | 449 | 0.0757 | -1 | c.118 others(4): Show |
p.His others(4): Show |
PSORS1C1 | ENSG00000204540.11 | transcript | ENST00000259881.10 | protein_coding | 5/6 | 438/939 | 118/459 | 40/152 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |
PSORS1C2_chr6_31132534_31144066 | 31138080 | AG | A | frameshift_variant | HIGH | HG01069.hp1 HG01071.hp1 HG01192.hp2 others(8): Show |
a0004 | a0004c0004 | a0004c0004t0002a0004c0004t0011 | a0004c0004t0002g0029a0004c0004t0002g0032a0004c0004t0002g0042others(2): Show | 11 | 461 | 0.0239 | -1 | c.281 others(4): Show |
p.Pro others(4): Show |
PSORS1C2 | ENSG00000204538.4 | transcript | ENST00000259845.5 | protein_coding | 2/2 | 321/868 | 281/411 | 94/136 | chr6 | TogoVar | ||
PTPN23_chr3_47376021_47418435 | 47410831 | A | AC | frameshift_variant | HIGH | HG00140.hp2 HG00597.hp1 HG00738.hp2 others(33): Show |
a0005a0006 | a0005c0007a0005c0010a0005c0029others(7): Show | a0005c0007t0001a0005c0010t0001a0005c0029t0001others(7): Show | a0005c0007t0001g0001a0005c0007t0001g0008a0005c0007t0001g0016others(31): Show | 36 | 332 | 0.1084 | 1 | c.304 others(5): Show |
p.Leu others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3117/5237 | 3041/4911 | 1014/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PTPN23_chr3_47376021_47418435 | 47411089 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00558.hp2 others(132): Show |
a0002a0004a0005others(6): Show | a0002c0003a0002c0008a0002c0009others(19): Show | a0002c0003t0001a0002c0008t0001a0002c0008t0002others(20): Show | a0002c0003t0001g0001a0002c0003t0001g0002a0002c0003t0001g0012others(118): Show | 135 | 332 | 0.4066 | 1 | c.329 others(5): Show |
p.Arg others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3373/5237 | 3297/4911 | 1099/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PTPRQ_chr12_80439235_80685273 | 80484408 | T | TTTTC | splice_acceptor_variant others(1): Show |
HIGH | HG00438.hp1 HG01074.hp2 HG01192.hp2 others(31): Show |
a0003a0005a0009others(14): Show | a0003c0003a0003c0079a0005c0004others(16): Show | a0003c0003t0001a0003c0003t0002a0003c0079t0001others(20): Show | a0003c0003t0001g0105a0003c0003t0001g0107a0003c0003t0002g0104others(31): Show | 34 | 178 | 0.1910 | 4 | c.118 others(17): Show |
PTPRQ | ENSG00000139304.16 | transcript | ENST00000644991.3 | protein_coding | 8/44 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
R3HDM1_chr2_135526484_135730269 | 135724075 | A | AC | frameshift_variant | HIGH | HG00621.hp1 HG01175.hp2 HG01192.hp1 others(9): Show |
a0005a0006a0008others(1): Show | a0005c0006a0006c0005a0008c0007others(1): Show | a0005c0006t0001a0005c0006t0003a0006c0005t0001others(3): Show | a0005c0006t0001g0010a0005c0006t0001g0022a0005c0006t0001g0126others(9): Show | 12 | 232 | 0.0517 | 1 | c.319 others(5): Show |
p.Leu others(6): Show |
R3HDM1 | ENSG00000048991.18 | transcript | ENST00000683871.1 | protein_coding | 27/27 | 3593/4781 | 3194/3405 | 1065/1134 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
RBMXL2_chr11_7083998_7096148 | 7089456 | C | CG | frameshift_variant | HIGH | HG00621.hp1 HG00642.hp2 HG01099.hp2 others(39): Show |
a0003a0005a0010others(1): Show | a0003c0004a0003c0005a0003c0011others(4): Show | a0003c0004t0001a0003c0004t0002a0003c0004t0003others(9): Show | a0003c0004t0001g0000a0003c0004t0002g0000a0003c0004t0003g0000others(9): Show | 42 | 460 | 0.0913 | 1 | c.341 others(4): Show |
p.Gly others(5): Show |
RBMXL2 | ENSG00000170748.7 | transcript | ENST00000306904.7 | protein_coding | 1/1 | 465/2151 | 342/1179 | 114/392 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
RENBP_chrX_153930269_153949643 | 153935324 | A | AG | frameshift_variant | HIGH | HG01192.hp1 | a0000 | a0000c0018 | a0000c0018t0001 | a0000c0018t0001g0178 | 1 | 297 | 0.0034 | 1 | c.124 others(5): Show |
p.Ser others(5): Show |
RENBP | ENSG00000102032.13 | transcript | ENST00000393700.8 | protein_coding | 11/11 | 1278/1334 | 1245/1284 | 415/427 | chrX | TogoVar | ||
RFPL1_chr22_29433583_29447455 | 29441895 | C | T | stop_gained | HIGH | HG00642.hp2 HG01074.hp1 HG01192.hp2 others(32): Show |
a0003a0005a0011 | a0003c0003a0005c0009a0011c0012 | a0003c0003t0003a0005c0009t0003a0011c0012t0003 | a0003c0003t0003g0005a0003c0003t0003g0008a0003c0003t0003g0014others(4): Show | 35 | 444 | 0.0788 | 0 | c.727 others(3): Show |
p.Gln others(4): Show |
RFPL1 | ENSG00000128250.5 | transcript | ENST00000354373.2 | protein_coding | 2/2 | 936/1496 | 727/954 | 243/317 | chr22 | TogoVar | ||
RHBG_chr1_156364211_156390219 | 156384556 | T | TC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(229): Show |
a0002a0003a0005others(9): Show | a0002c0002a0002c0008a0003c0004others(16): Show | a0002c0002t0001a0002c0008t0001a0003c0004t0001others(16): Show | a0002c0002t0001g0003a0002c0002t0001g0011a0002c0002t0001g0014others(130): Show | 232 | 438 | 0.5297 | 1 | c.127 others(5): Show |
p.Asp others(5): Show |
RHBG | ENSG00000132677.13 | transcript | ENST00000537040.6 | protein_coding | 9/10 | 1311/1790 | 1272/1377 | 424/458 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAA | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00639.hp2 others(99): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0012a0003c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(97): Show | 102 | 386 | 0.2643 | 2 | c.100 others(15): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SBK2_chr19_55523611_55542133 | 55530084 | C | CG | frameshift_variant | HIGH | HG00408.hp1 HG00408.hp2 HG00597.hp1 others(32): Show |
a0000 | a0000c0003a0000c0007a0000c0017others(1): Show | a0000c0003t0001a0000c0003t0002a0000c0003t0003others(14): Show | a0000c0003t0001g0172a0000c0003t0001g0173a0000c0003t0001g0196others(32): Show | 35 | 434 | 0.0807 | 1 | c.695 others(4): Show |
p.Pro others(5): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 4/4 | 777/2251 | 695/1047 | 232/348 | chr19 | TogoVar | ||
SCRIB_chr8_143785925_143820773 | 143792383 | G | GC | frameshift_variant | HIGH | HG00544.hp2 HG01099.hp1 HG01109.hp2 others(7): Show |
a0005a0010a0030 | a0005c0046a0005c0051a0005c0052others(5): Show | a0005c0046t0001a0005c0051t0001a0005c0052t0001others(5): Show | a0005c0046t0001g0205a0005c0051t0001g0082a0005c0052t0001g0134others(7): Show | 10 | 387 | 0.0258 | 1 | c.435 others(10): Show |
p.Pro others(6): Show |
SCRIB | ENSG00000180900.20 | transcript | ENST00000356994.7 | protein_coding | 32/37 | 4751/5607 | 4350/4968 | 1450/1655 | chr8 | TogoVar | ||
SCYGR7_chr2_227723335_227733625 | 227728565 | C | A | stop_gained | HIGH | HG01192.hp1 | a0016 | a0016c0029 | a0016c0029t0000 | a0016c0029t0000g0000 | 1 | 456 | 0.0022 | 0 | c.231 others(3): Show |
p.Cys others(3): Show |
SCYGR7 | ENSG00000284718.1 | transcript | ENST00000641700.1 | protein_coding | 1/1 | 231/291 | 231/291 | 77/96 | chr2 | TogoVar | ||
SERPINB11_chr18_63697960_63728893 | 63712604 | G | T | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(201): Show |
a0001a0004a0013 | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0005t0002a0001c0005t0005others(18): Show | a0001c0002t0001g0001a0001c0002t0001g0010a0001c0002t0001g0014others(79): Show | 204 | 422 | 0.4834 | 0 | c.268 others(3): Show |
p.Glu others(3): Show |
SERPINB11 | ENSG00000206072.13 | transcript | ENST00000544088.6 | protein_coding | 4/8 | 330/1735 | 268/1179 | 90/392 | chr18 | TogoVar | ||
SLC11A1_chr2_218377273_218401894 | 218391401 | G | GC | frameshift_variant | HIGH | HG01192.hp1 HG01496.hp1 HG01978.hp1 others(8): Show |
a0003 | a0003c0009a0003c0013a0003c0015others(1): Show | a0003c0009t0001a0003c0013t0004a0003c0013t0007others(2): Show | a0003c0009t0001g0001a0003c0009t0001g0012a0003c0009t0001g0135others(5): Show | 11 | 376 | 0.0293 | 1 | c.107 others(5): Show |
p.Ala others(5): Show |
SLC11A1 | ENSG00000018280.17 | transcript | ENST00000233202.11 | protein_coding | 11/15 | 1171/3608 | 1075/1653 | 359/550 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SLC22A10_chr11_63284903_63316783 | 63290453 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(160): Show |
a0002a0011 | a0002c0002a0002c0009a0002c0012others(4): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0007others(7): Show | a0002c0002t0002g0001a0002c0002t0002g0004a0002c0002t0002g0005others(95): Show | 163 | 402 | 0.4055 | 0 | c.288 others(3): Show |
p.Trp others(3): Show |
SLC22A10 | ENSG00000184999.13 | transcript | ENST00000332793.11 | protein_coding | 1/10 | 551/2638 | 288/1626 | 96/541 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63143377 | C | T | splice_donor_variant others(1): Show |
HIGH | HG00558.hp2 HG00597.hp2 HG00642.hp1 others(83): Show |
a0003a0007a0013others(2): Show | a0003c0003a0003c0009a0007c0007others(4): Show | a0003c0003t0002a0003c0003t0003a0003c0003t0005others(7): Show | a0003c0003t0002g0001a0003c0003t0002g0002a0003c0003t0002g0022others(80): Show | 86 | 366 | 0.2350 | 0 | c.402 others(5): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 1/9 | chr11 | TogoVar | ||||||
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar | ||
SLC52A2_chr8_144353613_144366272 | 144360065 | T | TC | frameshift_variant | HIGH | HG00597.hp2 HG01192.hp2 HG01891.hp2 others(10): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0005 | a0002c0002t0001g0001a0002c0002t0001g0002a0002c0002t0005g0001 | 13 | 386 | 0.0337 | 1 | c.576 others(4): Show |
p.Ala others(5): Show |
SLC52A2 | ENSG00000185803.12 | transcript | ENST00000643944.2 | protein_coding | 3/5 | 1140/2158 | 577/1338 | 193/445 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |
SLC6A18_chr5_1220381_1251189 | 1240642 | C | G | stop_gained | HIGH | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(178): Show |
a0001a0006a0007others(4): Show | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0002t0002a0001c0005t0001others(22): Show | a0001c0002t0001g0004a0001c0002t0001g0018a0001c0002t0001g0019others(157): Show | 181 | 456 | 0.3969 | 0 | c.957 others(3): Show |
p.Tyr others(4): Show |
SLC6A18 | ENSG00000164363.10 | transcript | ENST00000324642.4 | protein_coding | 7/12 | 1054/2095 | 957/1887 | 319/628 | chr5 | TogoVar | ||
SMN2_chr5_70044669_70082595 | 70072861 | GCCTGTAA others(6303): Show |
G | exon_loss_variant | HIGH | HG01074.hp1 HG01175.hp1 HG01192.hp2 |
a0000 | a0000c0005 | a0000c0005t0003 | a0000c0005t0003g0009a0000c0005t0003g0080 | 3 | 108 | 0.0278 | -6310 | c.834 others(14): Show |
SMN2 | ENSG00000205571.15 | transcript | ENST00000380743.9 | protein_coding | 8/9 | chr5 | TogoVar | ||||||
SMPDL3A_chr6_122784258_122814720 | 122803678 | C | T | stop_gained | HIGH | HG01168.hp2 HG01192.hp1 |
a0005 | a0005c0011 | a0005c0011t0002 | a0005c0011t0002g0001a0005c0011t0002g0032 | 2 | 442 | 0.0045 | 0 | c.583 others(3): Show |
p.Gln others(4): Show |
SMPDL3A | ENSG00000172594.13 | transcript | ENST00000368440.5 | protein_coding | 5/8 | 672/1763 | 583/1362 | 195/453 | chr6 | TogoVar | ||
SNX27_chr1_151607050_151704080 | 151692406 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(82): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(48): Show | a0001c0001t0001g0113a0001c0001t0001g0117a0001c0001t0001g0118others(82): Show | 85 | 366 | 0.2322 | 1 | c.124 others(7): Show |
SNX27 | ENSG00000143376.14 | transcript | ENST00000458013.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SON_chr21_33538038_33582481 | 33576378 | G | GA | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | 1 | c.723 others(5): Show |
p.Ala others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7292/8393 | 7237/7281 | 2413/2426 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |
SON_chr21_33538038_33582481 | 33576390 | GA | G | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | -1 | c.724 others(5): Show |
p.Arg others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7303/8393 | 7248/7281 | 2416/2426 | chr21 | TogoVar | ||
SPATA2L_chr16_89691357_89706705 | 89697587 | A | AC | frameshift_variant | HIGH | HG01099.hp2 HG01109.hp2 HG01175.hp2 others(17): Show |
a0002 | a0002c0004a0002c0007a0002c0009others(1): Show | a0002c0004t0001a0002c0004t0003a0002c0004t0004others(5): Show | a0002c0004t0001g0019a0002c0004t0001g0060a0002c0004t0001g0072others(12): Show | 20 | 418 | 0.0479 | 1 | c.102 others(5): Show |
p.Val others(5): Show |
SPATA2L | ENSG00000158792.16 | transcript | ENST00000289805.10 | protein_coding | 3/3 | 1100/2331 | 1021/1275 | 341/424 | chr16 | TogoVar | ||
SPATA31A3_chr9_66981304_66997550 | 66988619 | G | A | stop_gained | HIGH | HG01081.hp1 HG01167.hp1 HG01192.hp1 others(19): Show |
a0006a0014a0018others(1): Show | a0006c0005a0006c0056a0006c0057others(4): Show | a0006c0005t0001a0006c0056t0001a0006c0057t0001others(4): Show | a0006c0005t0001g0009a0006c0005t0001g0023a0006c0005t0001g0036others(9): Show | 22 | 406 | 0.0542 | 0 | c.187 others(4): Show |
p.Gln others(4): Show |
SPATA31A3 | ENSG00000275969.3 | transcript | ENST00000428649.5 | protein_coding | 4/4 | 1908/4223 | 1879/4044 | 627/1347 | chr9 | TogoVar | ||
SPATA31C2_chr9_88124305_88143475 | 88135895 | AATTTTAT others(3485): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG01192.hp2 NA19002.hp2 |
a0005 | a0005c0006 | a0005c0006t0003a0005c0006t0005 | a0005c0006t0003g0313a0005c0006t0005g0312 | 2 | 446 | 0.0045 | -3492 | c.-94 others(13): Show |
SPATA31C2 | ENSG00000177910.9 | transcript | ENST00000324915.6 | protein_coding | 1/4 | chr9 | TogoVar | ||||||
SPATA31F3_chr9_34884066_34900764 | 34893048 | GC | G | frameshift_variant | HIGH | HG00099.hp2 HG00642.hp2 HG00733.hp2 others(40): Show |
a0004 | a0004c0004 | a0004c0004t0001 | a0004c0004t0001g0005a0004c0004t0001g0042a0004c0004t0001g0043 | 43 | 434 | 0.0991 | -1 | c.355 others(4): Show |
p.Ala others(5): Show |
SPATA31F3 | ENSG00000187791.13 | transcript | ENST00000340783.11 | protein_coding | 4/5 | 397/967 | 355/627 | 119/208 | chr9 | TogoVar | ||
SPATA4_chr4_176179579_176200585 | 176184858 | TTCTC | T | frameshift_variant | HIGH | HG00140.hp2 HG00323.hp1 HG00323.hp2 others(12): Show |
a0002 | a0002c0005a0002c0006 | a0002c0005t0001a0002c0006t0001 | a0002c0005t0001g0012a0002c0005t0001g0063a0002c0005t0001g0079others(2): Show | 15 | 456 | 0.0329 | -4 | c.836 others(11): Show |
p.Arg others(5): Show |
SPATA4 | ENSG00000150628.7 | transcript | ENST00000280191.7 | protein_coding | 6/6 | 862/1142 | 836/918 | 279/305 | chr4 | TogoVar | ||
SPATC1L_chr21_46156160_46189459 | 46183495 | CTGCAGGG others(326): Show |
C | splice_acceptor_variant others(3): Show |
HIGH | HG01069.hp2 HG01106.hp1 HG01192.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0016a0001c0001t0040 | a0001c0001t0016g0034a0001c0001t0016g0068a0001c0001t0016g0069others(1): Show | 4 | 251 | 0.0159 | -333 | c.-95 others(12): Show |
SPATC1L | ENSG00000160284.15 | transcript | ENST00000291672.6 | protein_coding | 2/5 | 680 | chr21 | TogoVar | |||||
SPDYE21_chr7_67271941_67294005 | 67281505 | T | TGGGTGGC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00558.hp1 others(128): Show |
a0002a0009a0012others(2): Show | a0002c0002a0002c0010a0009c0011others(3): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0017others(6): Show | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0002t0001g0004others(50): Show | 131 | 460 | 0.2848 | 7 | c.514 others(14): Show |
p.Glu others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 4/9 | 1065/3286 | 521/1209 | 174/402 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
SRPK3_chrX_153776041_153790730 | 153784823 | G | GC | frameshift_variant | HIGH | HG01192.hp1 NA18997.hp1 NA19083.hp1 |
a0003a0010 | a0003c0020a0003c0022a0010c0015 | a0003c0020t0002a0003c0022t0001a0010c0015t0002 | a0003c0020t0002g0002a0003c0022t0001g0005a0010c0015t0002g0018 | 3 | 307 | 0.0098 | 1 | c.132 others(5): Show |
p.Ala others(5): Show |
SRPK3 | ENSG00000184343.11 | transcript | ENST00000370101.8 | protein_coding | 12/15 | 1375/1960 | 1329/1704 | 443/567 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SULT1C3_chr2_108234968_108265886 | 108259008 | AAAACTTG others(15): Show |
A | frameshift_variant | HIGH | HG00140.hp1 HG00280.hp2 HG00323.hp1 others(53): Show |
a0003a0022a0024 | a0003c0002a0003c0031a0022c0022others(1): Show | a0003c0002t0001a0003c0002t0004a0003c0031t0004others(2): Show | a0003c0002t0001g0094a0003c0002t0001g0134a0003c0002t0004g0002others(19): Show | 56 | 376 | 0.1489 | -22 | c.669 others(29): Show |
p.Trp others(5): Show |
SULT1C3 | ENSG00000196228.5 | transcript | ENST00000681802.2 | protein_coding | 7/8 | 792/1244 | 669/915 | 223/304 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |