regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC22A10_chr11_63284903_63316783 | 63290453 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(160): Show |
a0002a0011 | a0002c0002a0002c0009a0002c0012others(4): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0007others(7): Show | a0002c0002t0002g0001a0002c0002t0002g0004a0002c0002t0002g0005others(95): Show | 163 | 402 | 0.4055 | 0 | c.288 others(3): Show |
p.Trp others(3): Show |
SLC22A10 | ENSG00000184999.13 | transcript | ENST00000332793.11 | protein_coding | 1/10 | 551/2638 | 288/1626 | 96/541 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar | ||
SLC39A2_chr14_20994293_21006871 | 21001311 | C | A | stop_gained | HIGH | HG01256.hp1 HG01258.hp1 HG01496.hp2 |
a0006 | a0006c0007 | a0006c0007t0001 | a0006c0007t0001g0001 | 3 | 466 | 0.0064 | 0 | c.662 others(3): Show |
p.Ser others(4): Show |
SLC39A2 | ENSG00000165794.10 | transcript | ENST00000298681.5 | protein_coding | 4/4 | 816/1376 | 662/930 | 221/309 | chr14 | TogoVar | ||
SLC6A18_chr5_1220381_1251189 | 1240642 | C | G | stop_gained | HIGH | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(178): Show |
a0001a0006a0007others(4): Show | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0002t0002a0001c0005t0001others(22): Show | a0001c0002t0001g0004a0001c0002t0001g0018a0001c0002t0001g0019others(157): Show | 181 | 456 | 0.3969 | 0 | c.957 others(3): Show |
p.Tyr others(4): Show |
SLC6A18 | ENSG00000164363.10 | transcript | ENST00000324642.4 | protein_coding | 7/12 | 1054/2095 | 957/1887 | 319/628 | chr5 | TogoVar | ||
SMAD5_chr5_136127845_136187733 | 136147819 | A | AT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(137): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(18): Show | a0001c0001t0002g0007a0001c0001t0002g0008a0001c0001t0002g0009others(108): Show | 140 | 294 | 0.4762 | 1 | c.-24 others(7): Show |
SMAD5 | ENSG00000113658.18 | transcript | ENST00000545279.6 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
SOX9_chr17_72116020_72131416 | 72123889 | A | AC | frameshift_variant | HIGH | HG01496.hp1 HG02071.hp2 HG02145.hp1 others(8): Show |
a0000 | a0000c0003a0000c0008a0000c0015 | a0000c0003t0001a0000c0003t0002a0000c0003t0003others(6): Show | a0000c0003t0001g0002a0000c0003t0002g0001a0000c0003t0003g0001others(6): Show | 11 | 402 | 0.0274 | 1 | c.103 others(5): Show |
p.Gln others(5): Show |
SOX9 | ENSG00000125398.8 | transcript | ENST00000245479.3 | protein_coding | 3/3 | 1410/3931 | 1038/1530 | 346/509 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
SPDYE21_chr7_67271941_67294005 | 67278874 | G | A | splice_donor_variant others(1): Show |
HIGH | HG01123.hp2 HG01256.hp2 HG01496.hp2 others(14): Show |
a0005 | a0005c0005 | a0005c0005t0004a0005c0005t0012a0005c0005t0018 | a0005c0005t0004g0009a0005c0005t0004g0024a0005c0005t0004g0056others(4): Show | 17 | 460 | 0.0370 | 0 | c.160 others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 2/8 | chr7 | TogoVar | ||||||
SSX5_chrX_48181220_48201795 | 48192249 | G | A | stop_gained | HIGH | HG01496.hp1 | a0003 | a0003c0007 | a0003c0007t0021 | a0003c0007t0021g0130 | 1 | 326 | 0.0031 | 0 | c.313 others(3): Show |
p.Gln others(4): Show |
SSX5 | ENSG00000165583.16 | transcript | ENST00000347757.6 | protein_coding | 5/8 | 398/1293 | 313/567 | 105/188 | chrX | TogoVar | ||
STAG2_chrX_123956706_124107656 | 124061743 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG01106.hp1 HG01167.hp1 HG01496.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004a0001c0001t0001g0013a0001c0001t0001g0055others(13): Show | 16 | 276 | 0.0580 | 1 | c.153 others(7): Show |
STAG2 | ENSG00000101972.20 | transcript | ENST00000371145.8 | protein_coding | 16/34 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
STAP2_chr19_4319043_4343827 | 4328758 | G | C | stop_gained | HIGH | HG01496.hp2 | a0006 | a0006c0008 | a0006c0008t0001 | a0006c0008t0001g0188 | 1 | 388 | 0.0026 | 0 | c.507 others(3): Show |
p.Tyr others(4): Show |
STAP2 | ENSG00000178078.12 | transcript | ENST00000594605.6 | protein_coding | 6/13 | 581/1376 | 507/1212 | 169/403 | chr19 | TogoVar | ||
SURF2_chr9_133351550_133366158 | 133357790 | C | CG | frameshift_variant | HIGH | HG00741.hp1 HG01106.hp2 HG01496.hp1 others(12): Show |
a0003a0007 | a0003c0003a0003c0008a0007c0014 | a0003c0003t0001a0003c0008t0001a0007c0014t0001 | a0003c0003t0001g0001a0003c0003t0001g0004a0003c0003t0001g0043others(2): Show | 15 | 448 | 0.0335 | 1 | c.315 others(4): Show |
p.Tyr others(5): Show |
SURF2 | ENSG00000148291.10 | transcript | ENST00000371964.5 | protein_coding | 3/6 | 359/833 | 316/771 | 106/256 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |
SYN1_chrX_47566901_47624857 | 47574036 | C | CG | frameshift_variant | HIGH | HG01496.hp2 HG03927.hp2 |
a0010a0011 | a0010c0014a0011c0015 | a0010c0014t0001a0011c0015t0001 | a0010c0014t0001g0057a0011c0015t0001g0168 | 2 | 282 | 0.0071 | 1 | c.194 others(5): Show |
p.Ala others(5): Show |
SYN1 | ENSG00000008056.14 | transcript | ENST00000295987.13 | protein_coding | 12/13 | 2076/3210 | 1947/2118 | 649/705 | chrX | TogoVar | ||
SYN1_chrX_47566901_47624857 | 47574042 | C | CG | frameshift_variant | HIGH | HG01496.hp1 NA18994.hp1 NA19084.hp2 |
a0002 | a0002c0004a0002c0013 | a0002c0004t0001a0002c0013t0001 | a0002c0004t0001g0247a0002c0004t0001g0259a0002c0013t0001g0159 | 3 | 282 | 0.0106 | 1 | c.194 others(5): Show |
p.Ala others(5): Show |
SYN1 | ENSG00000008056.14 | transcript | ENST00000295987.13 | protein_coding | 12/13 | 2070/3210 | 1941/2118 | 647/705 | chrX | TogoVar | ||
SYNE2_chr14_63848004_64231433 | 63993818 | A | AT | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00438.hp2 HG00609.hp2 others(75): Show |
a0001a0002a0003others(38): Show | a0001c0004a0001c0005a0001c0009others(51): Show | a0001c0004t0003a0001c0005t0001a0001c0005t0002others(59): Show | a0001c0004t0003g0071a0001c0005t0001g0030a0001c0005t0002g0044others(75): Show | 78 | 150 | 0.5200 | 1 | c.264 others(7): Show |
SYNE2 | ENSG00000054654.20 | transcript | ENST00000555002.6 | protein_coding | 21/115 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SYNE2_chr14_63848004_64231433 | 64093374 | G | A | stop_gained | HIGH | HG00423.hp1 HG00741.hp1 HG01496.hp2 others(25): Show |
a0003a0008a0012others(10): Show | a0003c0002a0003c0015a0003c0034others(16): Show | a0003c0002t0001a0003c0002t0006a0003c0002t0011others(18): Show | a0003c0002t0001g0005a0003c0002t0001g0006a0003c0002t0001g0010others(25): Show | 28 | 150 | 0.1867 | 0 | c.120 others(5): Show |
p.Trp others(5): Show |
SYNE2 | ENSG00000054654.20 | transcript | ENST00000555002.6 | protein_coding | 61/116 | 12193/21822 | 12002/20724 | 4001/6907 | chr14 | TogoVar | ||
SYTL5_chrX_38001553_38133816 | 38006669 | G | A | splice_donor_variant others(1): Show |
HIGH | HG01261.hp1 HG01496.hp1 |
a0003 | a0003c0005 | a0003c0005t0002 | a0003c0005t0002g0001 | 2 | 250 | 0.0080 | 0 | c.-35 others(6): Show |
SYTL5 | ENSG00000147041.12 | transcript | ENST00000297875.7 | protein_coding | 1/16 | chrX | TogoVar | ||||||
TAC4_chr17_49833300_49853069 | 49844056 | TCACTCAC others(4): Show |
T | frameshift_variant others(3): Show |
HIGH | HG00639.hp1 HG00738.hp2 HG01106.hp1 others(10): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0005a0002c0002t0001g0071a0002c0002t0001g0072 | 13 | 406 | 0.0320 | -11 | c.196 others(20): Show |
p.Gly others(4): Show |
TAC4 | ENSG00000176358.16 | transcript | ENST00000436235.6 | protein_coding | 2/5 | 196/324 | 66/107 | chr17 | TogoVar | |||
TAMALIN_chr12_52001946_52020889 | 52014908 | G | GC | frameshift_variant | HIGH | HG00423.hp1 HG00597.hp2 HG00621.hp1 others(32): Show |
a0002a0005 | a0002c0002a0002c0006a0005c0013 | a0002c0002t0001a0002c0002t0002a0002c0006t0001others(1): Show | a0002c0002t0001g0001a0002c0002t0001g0002a0002c0002t0001g0003others(15): Show | 35 | 380 | 0.0921 | 1 | c.902 others(4): Show |
p.Pro others(5): Show |
TAMALIN | ENSG00000161835.11 | transcript | ENST00000293662.9 | protein_coding | 8/8 | 977/1952 | 903/1188 | 301/395 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
TAP2_chr6_32820415_32843739 | 32828908 | A | G | stop_lost | HIGH | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(156): Show |
a0000 | a0000c0002a0000c0006a0000c0008others(19): Show | a0000c0002t0001a0000c0002t0003a0000c0002t0025others(28): Show | a0000c0002t0001g0001a0000c0002t0001g0037a0000c0002t0001g0040others(70): Show | 159 | 485 | 0.3278 | 0 | c.205 others(4): Show |
p.Ter others(11): Show |
TAP2 | ENSG00000204267.19 | transcript | ENST00000374897.4 | protein_coding | 12/12 | 2150/5643 | 2059/2061 | 687/686 | chr6 | TogoVar | ||
TAS2R46_chr12_11056365_11067294 | 11061546 | C | T | stop_gained | HIGH | HG00140.hp2 HG00544.hp2 HG00558.hp2 others(64): Show |
a0002a0007a0010 | a0002c0002a0007c0010a0010c0009 | a0002c0002t0000a0007c0010t0000a0010c0009t0000 | a0002c0002t0000g0000a0007c0010t0000g0000a0010c0009t0000g0000 | 67 | 295 | 0.2271 | 0 | c.749 others(3): Show |
p.Trp others(4): Show |
TAS2R46 | ENSG00000226761.3 | transcript | ENST00000533467.1 | protein_coding | 1/1 | 749/930 | 749/930 | 250/309 | chr12 | TogoVar | ||
TBC1D19_chr4_26579084_26761223 | 26735441 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(270): Show | 274 | 310 | 0.8839 | 1 | c.108 others(7): Show |
TBC1D19 | ENSG00000109680.11 | transcript | ENST00000264866.9 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
TBC1D31_chr8_123067707_123157153 | 123142457 | G | T | splice_donor_variant others(1): Show |
HIGH | HG00323.hp2 HG00423.hp2 HG00438.hp2 others(86): Show |
a0001a0002a0010 | a0001c0001a0001c0003a0001c0008others(6): Show | a0001c0001t0001a0001c0003t0001a0001c0008t0001others(6): Show | a0001c0001t0001g0003a0001c0001t0001g0043a0001c0001t0001g0162others(85): Show | 89 | 322 | 0.2764 | 0 | c.283 others(6): Show |
TBC1D31 | ENSG00000156787.17 | transcript | ENST00000287380.6 | protein_coding | 19/21 | chr8 | TogoVar | ||||||
TBCD_chr17_82747065_82950914 | 82797739 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(115): Show |
a0001a0002a0006others(9): Show | a0001c0001a0001c0002a0001c0014others(17): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0026others(31): Show | a0001c0001t0002g0223a0001c0001t0002g0271a0001c0001t0002g0301others(115): Show | 118 | 318 | 0.3711 | 1 | c.772 others(6): Show |
TBCD | ENSG00000141556.22 | transcript | ENST00000355528.9 | protein_coding | 7/38 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TIGD6_chr5_149988118_150005654 | 149996157 | TC | T | frameshift_variant | HIGH | HG00735.hp1 HG01069.hp1 HG01071.hp1 others(33): Show |
a0004a0006 | a0004c0004a0004c0006a0004c0007others(2): Show | a0004c0004t0006a0004c0004t0011a0004c0004t0020others(5): Show | a0004c0004t0006g0008a0004c0004t0006g0017a0004c0004t0006g0058others(8): Show | 36 | 436 | 0.0826 | -1 | c.191 others(4): Show |
p.Gly others(4): Show |
TIGD6 | ENSG00000164296.7 | transcript | ENST00000296736.4 | protein_coding | 2/2 | 453/3493 | 191/1566 | 64/521 | chr5 | TogoVar | ||
TLR10_chr4_38767238_38787990 | 38773277 | G | A | stop_gained | HIGH | HG01496.hp1 | a0014 | a0014c0024 | a0014c0024t0002 | a0014c0024t0002g0063 | 1 | 438 | 0.0023 | 0 | c.231 others(4): Show |
p.Arg others(4): Show |
TLR10 | ENSG00000174123.11 | transcript | ENST00000308973.9 | protein_coding | 4/4 | 2952/3991 | 2314/2436 | 772/811 | chr4 | TogoVar | ||
TLR8_chrX_12901620_12928169 | 12906707 | A | G | start_lost others(1): Show |
HIGH | HG00099.hp2 HG00423.hp1 HG00438.hp1 others(162): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0004a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0008a0001c0004t0001others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0011others(44): Show | 165 | 303 | 0.5446 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
TLR8 | ENSG00000101916.12 | transcript | ENST00000218032.7 | protein_coding | 1/2 | 88/4216 | 1/3126 | 1/1041 | chrX | TogoVar | ||
TMEM216_chr11_61387587_61403846 | 61398269 | G | C | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00408.hp1 HG00408.hp2 others(173): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0005a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0008a0001c0005t0001others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0011others(24): Show | 176 | 270 | 0.6519 | 0 | c.432 others(5): Show |
TMEM216 | ENSG00000187049.11 | transcript | ENST00000515837.7 | protein_coding | 4/4 | chr11 | TogoVar | ||||||
TMPRSS11A_chr4_67904395_67968493 | 67963391 | C | T | start_lost | HIGH | HG00280.hp2 HG00323.hp1 HG00544.hp1 others(97): Show |
a0002a0003a0005others(1): Show | a0002c0002a0002c0015a0002c0018others(7): Show | a0002c0002t0002a0002c0002t0011a0002c0002t0019others(13): Show | a0002c0002t0002g0001a0002c0002t0002g0002a0002c0002t0002g0005others(79): Show | 100 | 394 | 0.2538 | 0 | c.3G> others(1): Show |
p.Met others(2): Show |
TMPRSS11A | ENSG00000187054.16 | transcript | ENST00000508048.6 | protein_coding | 1/10 | 103/3304 | 3/1257 | 1/418 | chr4 | TogoVar | ||
TMPRSS4_chr11_118072078_118126890 | 118094815 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(127): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0012others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0092a0001c0001t0002g0190a0001c0001t0003g0009others(124): Show | 130 | 406 | 0.3202 | 0 | c.4-1 others(3): Show |
TMPRSS4 | ENSG00000137648.19 | transcript | ENST00000437212.8 | protein_coding | 1/12 | chr11 | TogoVar | ||||||
TMPRSS6_chr22_37060436_37114713 | 37069345 | C | CTGGGG | splice_acceptor_variant others(1): Show |
HIGH | HG01109.hp2 HG01243.hp2 HG01496.hp1 others(13): Show |
a0001a0002a0012others(1): Show | a0001c0004a0001c0005a0002c0001others(4): Show | a0001c0004t0001a0001c0004t0005a0001c0004t0006others(8): Show | a0001c0004t0001g0029a0001c0004t0005g0268a0001c0004t0006g0119others(13): Show | 16 | 348 | 0.0460 | 5 | c.184 others(18): Show |
TMPRSS6 | ENSG00000187045.19 | transcript | ENST00000676104.1 | protein_coding | 15/17 | chr22 | TogoVar | ||||||
TMPRSS6_chr22_37060436_37114713 | 37069345 | CTGGGG | C | splice_acceptor_variant others(2): Show |
HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(122): Show |
a0001a0002a0003others(2): Show | a0001c0005a0001c0006a0001c0009others(21): Show | a0001c0005t0001a0001c0005t0002a0001c0006t0001others(22): Show | a0001c0005t0001g0082a0001c0005t0001g0120a0001c0005t0001g0121others(118): Show | 125 | 348 | 0.3592 | -5 | c.184 others(18): Show |
TMPRSS6 | ENSG00000187045.19 | transcript | ENST00000676104.1 | protein_coding | 15/17 | chr22 | TogoVar | ||||||
TNFAIP8_chr5_119351019_119404688 | 119392800 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp1 HG00741.hp2 HG01496.hp2 others(39): Show |
a0001 | a0001c0002 | a0001c0002t0007a0001c0002t0015a0001c0002t0018others(22): Show | a0001c0002t0007g0211a0001c0002t0007g0215a0001c0002t0007g0220others(37): Show | 42 | 384 | 0.1094 | 1 | c.32- others(5): Show |
TNFAIP8 | ENSG00000145779.8 | transcript | ENST00000504771.3 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
TNK2_chr3_195858364_195913551 | 195868357 | C | CG | frameshift_variant | HIGH | HG00597.hp1 HG00621.hp1 HG00639.hp1 others(50): Show |
a0002a0013a0016others(3): Show | a0002c0004a0002c0008a0002c0010others(20): Show | a0002c0004t0001a0002c0004t0002a0002c0008t0001others(24): Show | a0002c0004t0001g0131a0002c0004t0001g0256a0002c0004t0001g0279others(50): Show | 53 | 372 | 0.1425 | 1 | c.194 others(5): Show |
p.Pro others(5): Show |
TNK2 | ENSG00000061938.21 | transcript | ENST00000672887.2 | protein_coding | 13/16 | 2025/4070 | 1940/3168 | 647/1055 | chr3 | TogoVar | ||
TNRC18_chr7_5301811_5428834 | 5361627 | C | CG | frameshift_variant | HIGH | HG00597.hp2 HG00673.hp2 HG01258.hp2 others(22): Show |
a0003a0005a0008others(5): Show | a0003c0044a0005c0018a0005c0024others(20): Show | a0003c0044t0008a0005c0018t0003a0005c0018t0040others(21): Show | a0003c0044t0008g0050a0005c0018t0003g0248a0005c0018t0040g0031others(22): Show | 25 | 306 | 0.0817 | 1 | c.462 others(5): Show |
p.Arg others(6): Show |
TNRC18 | ENSG00000182095.15 | transcript | ENST00000430969.6 | protein_coding | 14/30 | 5264/10839 | 4627/8907 | 1543/2968 | chr7 | TogoVar | ||
TPSB2_chr16_1223336_1235184 | 1229237 | C | CG | frameshift_variant | HIGH | HG00140.hp2 HG00642.hp2 HG00735.hp2 others(21): Show |
a0004 | a0004c0004a0004c0014 | a0004c0004t0002a0004c0004t0008a0004c0014t0002 | a0004c0004t0002g0004a0004c0004t0002g0012a0004c0004t0008g0034others(1): Show | 24 | 344 | 0.0698 | 1 | c.452 others(4): Show |
p.Met others(5): Show |
TPSB2 | ENSG00000197253.14 | transcript | ENST00000606293.5 | protein_coding | 4/6 | 475/1165 | 452/828 | 151/275 | chr16 | TogoVar | ||
TRAPPC13_chr5_65620027_65671233 | 65652514 | T | A | stop_gained | HIGH | HG01496.hp1 | a0003 | a0003c0004 | a0003c0004t0002 | a0003c0004t0002g0214 | 1 | 366 | 0.0027 | 0 | c.515 others(3): Show |
p.Leu others(4): Show |
TRAPPC13 | ENSG00000113597.18 | transcript | ENST00000399438.8 | protein_coding | 7/13 | 549/2910 | 515/1254 | 172/417 | chr5 | TogoVar | ||
TSPAN10_chr17_81632196_81653749 | 81647906 | T | TTAAC | frameshift_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(30): Show |
a0004a0007 | a0004c0005a0004c0011a0004c0012others(1): Show | a0004c0005t0003a0004c0011t0003a0004c0012t0003others(1): Show | a0004c0005t0003g0002a0004c0005t0003g0140a0004c0005t0003g0141others(6): Show | 33 | 410 | 0.0805 | 4 | c.682 others(11): Show |
p.Cys others(5): Show |
TSPAN10 | ENSG00000182612.11 | transcript | ENST00000611590.2 | protein_coding | 4/4 | 1003/1840 | 686/1068 | 229/355 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
TTC12_chr11_113309583_113371387 | 113352209 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00609.hp1 HG01496.hp1 HG01978.hp2 others(2): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0115a0002c0002t0001g0011a0002c0002t0001g0154 | 5 | 344 | 0.0145 | 0 | c.144 others(6): Show |
TTC12 | ENSG00000149292.17 | transcript | ENST00000529221.6 | protein_coding | 16/21 | chr11 | TogoVar | ||||||
TTC31_chr2_74478081_74499559 | 74492143 | GGGTACCA others(49): Show |
G | frameshift_variant | HIGH | HG01496.hp2 | a0009 | a0009c0009 | a0009c0009t0002 | a0009c0009t0002g0037 | 1 | 332 | 0.0030 | -56 | c.936 others(63): Show |
p.Thr others(5): Show |
TTC31 | ENSG00000115282.21 | transcript | ENST00000233623.11 | protein_coding | 10/13 | 951/2916 | 936/1560 | 312/519 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
TTC31_chr2_74478081_74499559 | 74492295 | CTTTATCA others(44): Show |
C | frameshift_variant others(3): Show |
HIGH | HG01496.hp2 | a0009 | a0009c0009 | a0009c0009t0002 | a0009c0009t0002g0037 | 1 | 332 | 0.0030 | -51 | c.102 others(62): Show |
p.Leu others(5): Show |
TTC31 | ENSG00000115282.21 | transcript | ENST00000233623.11 | protein_coding | 11/13 | 1020/1560 | 340/519 | chr2 | TogoVar | |||
TUBA3E_chr2_130186745_130203439 | 130197356 | ACACACCT others(2467): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(174): Show |
a0001 | a0001c0002a0001c0005a0001c0011others(14): Show | a0001c0002t0002a0001c0005t0002a0001c0011t0002others(14): Show | a0001c0002t0002g0002a0001c0002t0002g0003a0001c0002t0002g0006others(31): Show | 177 | 428 | 0.4136 | -2474 | c.-14 others(11): Show |
TUBA3E | ENSG00000152086.9 | transcript | ENST00000312988.9 | protein_coding | 1/5 | chr2 | TogoVar | ||||||
UGT2B4_chr4_69475165_69500905 | 69495859 | C | T | start_lost | HIGH | HG01496.hp1 | a0007 | a0007c0008 | a0007c0008t0001 | a0007c0008t0001g0056 | 1 | 436 | 0.0023 | 0 | c.3G> others(1): Show |
p.Met others(2): Show |
UGT2B4 | ENSG00000156096.15 | transcript | ENST00000305107.7 | protein_coding | 1/6 | 47/2100 | 3/1587 | 1/528 | chr4 | TogoVar | ||
UNC5B_chr10_71207570_71307864 | 71296712 | GATATTCC others(43): Show |
G | frameshift_variant others(3): Show |
HIGH | HG01496.hp1 | a0024 | a0024c0044 | a0024c0044t0001 | a0024c0044t0001g0090 | 1 | 368 | 0.0027 | -50 | c.247 others(62): Show |
p.His others(5): Show |
UNC5B | ENSG00000107731.12 | transcript | ENST00000335350.10 | protein_coding | 15/17 | 2891/6841 | 2475/2838 | 825/945 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
UPK3BL2_chr7_102532919_102548696 | 102536844 | CCTGTAAT others(5888): Show |
C | exon_loss_variant | HIGH | HG00280.hp2 HG01255.hp1 HG01258.hp2 others(4): Show |
a0000 | a0000c0005 | a0000c0005t0007 | a0000c0005t0007g0003 | 7 | 182 | 0.0385 | -5895 | c.112 others(13): Show |
UPK3BL2 | ENSG00000284981.2 | transcript | ENST00000644544.2 | protein_coding | 6/6 | chr7 | TogoVar | ||||||
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
VPS13B_chr8_99008274_99882580 | 99832341 | A | ATTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00597.hp2 HG00609.hp1 HG00642.hp2 others(14): Show |
a0001a0006 | a0001c0002a0001c0016a0006c0012 | a0001c0002t0001a0001c0002t0002a0001c0016t0004others(1): Show | a0001c0002t0001g0002a0001c0002t0001g0003a0001c0002t0001g0004others(14): Show | 17 | 134 | 0.1269 | 4 | c.933 others(17): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 51/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
VPS13B_chr8_99008274_99882580 | 99832341 | A | ATTTTTTT others(14): Show |
splice_acceptor_variant others(1): Show |
HIGH | HG01496.hp1 | a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0097 | 1 | 134 | 0.0075 | 21 | c.933 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 51/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
VSIG10L_chr19_51326541_51347139 | 51332638 | T | TG | frameshift_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(448): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0003others(24): Show | a0000c0001t0001a0000c0001t0002a0000c0001t0006others(40): Show | a0000c0001t0001g0004a0000c0001t0001g0012a0000c0001t0001g0014others(104): Show | 451 | 452 | 0.9978 | 1 | c.257 others(5): Show |
p.Gln others(5): Show |
VSIG10L | ENSG00000186806.6 | transcript | ENST00000335624.5 | protein_coding | 10/10 | 2591/3689 | 2576/2604 | 859/867 | chr19 | TogoVar | ||
ZAN_chr7_100728595_100802797 | 100773735 | G | A | stop_gained | HIGH | HG00323.hp2 HG00423.hp1 HG00438.hp2 others(73): Show |
a0001a0026a0029others(4): Show | a0001c0001a0001c0006a0001c0009others(14): Show | a0001c0001t0001a0001c0006t0001a0001c0009t0001others(14): Show | a0001c0001t0001g0094a0001c0001t0001g0097a0001c0001t0001g0106others(73): Show | 76 | 308 | 0.2468 | 0 | c.564 others(4): Show |
p.Trp others(5): Show |
ZAN | ENSG00000146839.19 | transcript | ENST00000613979.5 | protein_coding | 31/48 | 5845/8700 | 5649/8439 | 1883/2812 | chr7 | TogoVar |