Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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view	regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
	ZNG1E_chr9_65670928_65739041	65733107	C C	T T	stop_gained stop_gained	HIGH	HG00423.hp1 HG00639.hp2 HG01069.hp2 others(53): Show HG00423.hp1 HG00639.hp2 HG01069.hp2 HG01070.hp2 HG01106.hp2 HG01167.hp1 HG01169.hp1 HG01261.hp1 HG01361.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp1 HG01928.hp2 HG01952.hp2 HG01993.hp1 HG02040.hp1 HG02040.hp2 HG02129.hp1 HG02135.hp1 HG02165.hp1 HG02683.hp2 HG02896.hp1 HG03017.hp1 HG03041.hp1 HG03491.hp1 HG03492.hp2 HG03579.hp2 HG03669.hp2 HG03942.hp1 HG04115.hp2 NA18906.hp2 NA18939.hp1 NA18941.hp2 NA18949.hp1 NA18954.hp2 NA18961.hp1 NA18963.hp1 NA18965.hp2 NA18972.hp2 NA18974.hp2 NA18977.hp1 NA18978.hp1 NA18984.hp2 NA18987.hp1 NA18993.hp1 NA18998.hp2 NA18999.hp1 NA19005.hp1 NA19007.hp1 NA19068.hp2 NA19075.hp2 NA19083.hp1 NA19088.hp2 NA19091.hp2 NA20805.hp2 NA21309.hp2	a0002 a0007 a0002 a0007	a0002c0002 a0007c0010 a0002c0002 a0007c0010	a0002c0002t0002 a0002c0002t0006 a0007c0010t0002 a0002c0002t0002 a0002c0002t0006 a0007c0010t0002	a0002c0002t0002g0003 a0002c0002t0002g0006 a0002c0002t0002g0014 others(52): Show a0002c0002t0002g0003 a0002c0002t0002g0006 a0002c0002t0002g0014 a0002c0002t0002g0016 a0002c0002t0002g0017 a0002c0002t0002g0018 a0002c0002t0002g0019 a0002c0002t0002g0020 a0002c0002t0002g0021 a0002c0002t0002g0022 a0002c0002t0002g0023 a0002c0002t0002g0024 a0002c0002t0002g0025 a0002c0002t0002g0026 a0002c0002t0002g0027 a0002c0002t0002g0028 a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0002g0032 a0002c0002t0002g0033 a0002c0002t0002g0034 a0002c0002t0002g0035 a0002c0002t0002g0036 a0002c0002t0002g0037 a0002c0002t0002g0038 a0002c0002t0002g0039 a0002c0002t0002g0040 a0002c0002t0002g0041 a0002c0002t0002g0042 a0002c0002t0002g0044 a0002c0002t0002g0045 a0002c0002t0002g0046 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0049 a0002c0002t0002g0050 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0054 a0002c0002t0002g0055 a0002c0002t0002g0056 a0002c0002t0002g0057 a0002c0002t0002g0058 a0002c0002t0002g0059 a0002c0002t0002g0060 a0002c0002t0002g0061 a0002c0002t0002g0062 a0002c0002t0002g0063 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0073 a0002c0002t0006g0043 a0007c0010t0002g0015	56	202	0.2772	0	c.106 others(4): Show c.1066C>T	p.Arg others(4): Show p.Arg356*	ZNG1E	ENSG00000147996.17	transcript	ENST00000382405.8	protein_coding	14/15	1115/1662	1066/1188	356/395			chr9	TogoVar