regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SHROOM2_chrX_9781429_9954443 | 9896090 | TG | T | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | -1 | c.218 others(5): Show |
p.Glu others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 2302/7474 | 2185/4851 | 729/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9896406 | G | GC | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.250 others(5): Show |
p.Arg others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 2618/7474 | 2501/4851 | 834/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHROOM2_chrX_9781429_9954443 | 9896660 | A | AG | frameshift_variant | HIGH | NA18965.hp1 | a0018 | a0018c0074 | a0018c0074t0003 | a0018c0074t0003g0187 | 1 | 256 | 0.0039 | 1 | c.275 others(5): Show |
p.Ser others(5): Show |
SHROOM2 | ENSG00000146950.13 | transcript | ENST00000380913.8 | protein_coding | 4/10 | 2872/7474 | 2755/4851 | 919/1616 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SIGLEC12_chr19_51486227_51506800 | 51501537 | G | GC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(226): Show |
a0001a0003a0005others(3): Show | a0001c0002a0001c0003a0001c0010others(23): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0005others(27): Show | a0001c0002t0001g0001a0001c0002t0001g0004a0001c0002t0001g0012others(92): Show | 229 | 432 | 0.5301 | 1 | c.196 others(4): Show |
p.Ala others(4): Show |
SIGLEC12 | ENSG00000254521.7 | transcript | ENST00000291707.8 | protein_coding | 1/8 | 263/2269 | 196/1788 | 66/595 | chr19 | TogoVar | ||
SLC22A14_chr3_38277294_38323575 | 38307252 | A | C | splice_acceptor_variant others(1): Show |
HIGH | HG00609.hp1 HG00621.hp1 HG00735.hp2 others(42): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0019a0001c0001t0001g0024a0001c0001t0001g0199others(35): Show | 45 | 406 | 0.1108 | 0 | c.517 others(5): Show |
SLC22A14 | ENSG00000144671.11 | transcript | ENST00000448498.6 | protein_coding | 2/10 | chr3 | TogoVar | ||||||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A31_chr16_89190761_89205537 | 89196258 | GCCTGGCC others(74): Show |
G | frameshift_variant others(3): Show |
HIGH | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(170): Show |
a0002a0005a0006others(4): Show | a0002c0002a0002c0004a0002c0007others(9): Show | a0002c0002t0001a0002c0002t0002a0002c0004t0001others(10): Show | a0002c0002t0001g0002a0002c0002t0001g0010a0002c0002t0001g0014others(30): Show | 173 | 428 | 0.4042 | -81 | c.103 others(93): Show |
p.Arg others(5): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 9/9 | 1117/1615 | 1035/1341 | 345/446 | chr16 | TogoVar | ||
SLC27A1_chr19_17465524_17511168 | 17497378 | TTCACGGA others(4): Show |
T | frameshift_variant | HIGH | NA18965.hp1 | a0004 | a0004c0007 | a0004c0007t0001 | a0004c0007t0001g0057 | 1 | 350 | 0.0029 | -11 | c.112 others(20): Show |
p.Thr others(5): Show |
SLC27A1 | ENSG00000130304.17 | transcript | ENST00000252595.12 | protein_coding | 7/12 | 1139/3514 | 1122/1941 | 374/646 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |
SMAD5_chr5_136127845_136187733 | 136147819 | A | AT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(137): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(18): Show | a0001c0001t0002g0007a0001c0001t0002g0008a0001c0001t0002g0009others(108): Show | 140 | 294 | 0.4762 | 1 | c.-24 others(7): Show |
SMAD5 | ENSG00000113658.18 | transcript | ENST00000545279.6 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
SOX8_chr16_976770_991979 | 985156 | G | GC | frameshift_variant | HIGH | HG01261.hp1 HG02056.hp2 NA18956.hp1 others(6): Show |
a0000a0002 | a0000c0006a0000c0007a0002c0018others(2): Show | a0000c0006t0001a0000c0007t0002a0000c0007t0009others(3): Show | a0000c0006t0001g0001a0000c0007t0002g0002a0000c0007t0009g0002others(3): Show | 9 | 434 | 0.0207 | 1 | c.111 others(5): Show |
p.Ala others(5): Show |
SOX8 | ENSG00000005513.11 | transcript | ENST00000293894.4 | protein_coding | 3/3 | 1270/3087 | 1117/1341 | 373/446 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |
SPANXA2_chrX_141584708_141595762 | 141589789 | GGC | G | frameshift_variant | HIGH | NA18965.hp1 | a0006 | a0006c0006 | a0006c0006t0006 | a0006c0006t0006g0016 | 1 | 185 | 0.0054 | -2 | c.24_ others(7): Show |
p.Val others(4): Show |
SPANXA2 | ENSG00000203926.5 | transcript | ENST00000370518.4 | protein_coding | 1/2 | 84/408 | 24/294 | 8/97 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SPANXA2_chrX_141584708_141595762 | 141590591 | TA | T | frameshift_variant | HIGH | NA18965.hp1 | a0006 | a0006c0006 | a0006c0006t0006 | a0006c0006t0006g0016 | 1 | 185 | 0.0054 | -1 | c.181 others(4): Show |
p.Arg others(4): Show |
SPANXA2 | ENSG00000203926.5 | transcript | ENST00000370518.4 | protein_coding | 2/2 | 241/408 | 181/294 | 61/97 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SPATA22_chr17_3435019_3476819 | 3471678 | GCA | G | splice_donor_variant others(2): Show |
HIGH | HG00140.hp2 HG00733.hp1 HG01358.hp1 others(46): Show |
a0001a0002a0005others(1): Show | a0001c0001a0002c0002a0005c0012others(1): Show | a0001c0001t0001a0002c0002t0001a0002c0002t0002others(2): Show | a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0018others(39): Show | 49 | 420 | 0.1167 | -2 | c.-74 others(13): Show |
SPATA22 | ENSG00000141255.13 | transcript | ENST00000572969.6 | protein_coding | 1/8 | chr17 | TogoVar | ||||||
SPATA45_chr1_212825141_212852649 | 212836041 | G | A | stop_gained | HIGH | HG00423.hp1 HG00673.hp1 HG02015.hp2 others(14): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0005a0003c0003t0001g0031a0003c0003t0001g0185others(4): Show | 17 | 402 | 0.0423 | 0 | c.109 others(3): Show |
p.Arg others(3): Show |
SPATA45 | ENSG00000185523.6 | transcript | ENST00000332912.3 | protein_coding | 2/3 | 217/506 | 109/297 | 37/98 | chr1 | TogoVar | ||
SPDYE2_chr7_102546226_102568538 | 102551289 | G | C | splice_donor_variant others(1): Show |
HIGH | HG00609.hp2 HG01070.hp1 HG01515.hp2 others(24): Show |
a0001a0002a0003others(7): Show | a0001c0001a0002c0002a0003c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0015others(11): Show | a0001c0001t0001g0021a0001c0001t0001g0027a0001c0001t0001g0028others(24): Show | 27 | 164 | 0.1646 | 0 | c.-42 others(6): Show |
SPDYE2 | ENSG00000205238.12 | transcript | ENST00000691607.2 | protein_coding | 1/8 | chr7 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35667243 | C | T | stop_gained | HIGH | NA18965.hp2 | a0020 | a0020c0052 | a0020c0052t0001 | a0020c0052t0001g0230 | 1 | 268 | 0.0037 | 0 | c.133 others(4): Show |
p.Arg others(4): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 9/37 | 1474/5662 | 1339/5469 | 447/1822 | chr5 | TogoVar | ||
SWI5_chr9_128271276_128293989 | 128276342 | T | A | start_lost | HIGH | NA18965.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0236 | 1 | 386 | 0.0026 | 0 | c.2T> others(1): Show |
p.Leu others(2): Show |
SWI5 | ENSG00000175854.15 | transcript | ENST00000418976.3 | protein_coding | 1/5 | 67/731 | 2/393 | 1/130 | chr9 | TogoVar | ||
SWI5_chr9_128271276_128293989 | 128276403 | G | T | splice_donor_variant others(1): Show |
HIGH | NA18965.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0236 | 1 | 386 | 0.0026 | 0 | c.62+ others(4): Show |
SWI5 | ENSG00000175854.15 | transcript | ENST00000418976.3 | protein_coding | 1/4 | chr9 | TogoVar | ||||||
SWI5_chr9_128271276_128293989 | 128276404 | T | G | splice_donor_variant others(1): Show |
HIGH | NA18965.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0236 | 1 | 386 | 0.0026 | 0 | c.62+ others(4): Show |
SWI5 | ENSG00000175854.15 | transcript | ENST00000418976.3 | protein_coding | 1/4 | chr9 | TogoVar | ||||||
TBC1D19_chr4_26579084_26761223 | 26735441 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(271): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(270): Show | 274 | 310 | 0.8839 | 1 | c.108 others(7): Show |
TBC1D19 | ENSG00000109680.11 | transcript | ENST00000264866.9 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
TBCD_chr17_82747065_82950914 | 82797739 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(115): Show |
a0001a0002a0006others(9): Show | a0001c0001a0001c0002a0001c0014others(17): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0026others(31): Show | a0001c0001t0002g0223a0001c0001t0002g0271a0001c0001t0002g0301others(115): Show | 118 | 318 | 0.3711 | 1 | c.772 others(6): Show |
TBCD | ENSG00000141556.22 | transcript | ENST00000355528.9 | protein_coding | 7/38 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
THRA_chr17_40057965_40098002 | 40088492 | TGTCAACA others(42): Show |
T | frameshift_variant others(3): Show |
HIGH | NA18965.hp2 | a0003 | a0003c0005 | a0003c0005t0036 | a0003c0005t0036g0097 | 1 | 358 | 0.0028 | -49 | c.978 others(59): Show |
p.Thr others(5): Show |
THRA | ENSG00000126351.13 | transcript | ENST00000450525.7 | protein_coding | 8/9 | 1403/5204 | 978/1233 | 326/410 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
TIGD6_chr5_149988118_150005654 | 149995316 | CT | C | frameshift_variant | HIGH | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(190): Show |
a0001a0004a0009others(5): Show | a0001c0001a0001c0017a0004c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0001a0001c0001t0001g0015a0001c0001t0001g0020others(31): Show | 193 | 436 | 0.4427 | -1 | c.103 others(5): Show |
p.Glu others(5): Show |
TIGD6 | ENSG00000164296.7 | transcript | ENST00000296736.4 | protein_coding | 2/2 | 1294/3493 | 1032/1566 | 344/521 | chr5 | TogoVar | ||
TLR8_chrX_12901620_12928169 | 12906707 | A | G | start_lost others(1): Show |
HIGH | HG00099.hp2 HG00423.hp1 HG00438.hp1 others(162): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0004a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0008a0001c0004t0001others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0011others(44): Show | 165 | 303 | 0.5446 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
TLR8 | ENSG00000101916.12 | transcript | ENST00000218032.7 | protein_coding | 1/2 | 88/4216 | 1/3126 | 1/1041 | chrX | TogoVar | ||
TMEM63B_chr6_44122554_44160519 | 44154856 | CCTCATAG others(6): Show |
C | frameshift_variant | HIGH | NA18965.hp2 | a0000 | a0000c0011 | a0000c0011t0015 | a0000c0011t0015g0107 | 1 | 402 | 0.0025 | -13 | c.247 others(22): Show |
p.Leu others(5): Show |
TMEM63B | ENSG00000137216.19 | transcript | ENST00000323267.11 | protein_coding | 24/24 | 2622/3284 | 2473/2499 | 825/832 | chr6 | TogoVar | ||
TMPRSS11A_chr4_67904395_67968493 | 67963391 | C | T | start_lost | HIGH | HG00280.hp2 HG00323.hp1 HG00544.hp1 others(97): Show |
a0002a0003a0005others(1): Show | a0002c0002a0002c0015a0002c0018others(7): Show | a0002c0002t0002a0002c0002t0011a0002c0002t0019others(13): Show | a0002c0002t0002g0001a0002c0002t0002g0002a0002c0002t0002g0005others(79): Show | 100 | 394 | 0.2538 | 0 | c.3G> others(1): Show |
p.Met others(2): Show |
TMPRSS11A | ENSG00000187054.16 | transcript | ENST00000508048.6 | protein_coding | 1/10 | 103/3304 | 3/1257 | 1/418 | chr4 | TogoVar | ||
TMPRSS3_chr21_42366890_42401052 | 42383199 | C | CTA | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(99): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0003a0002c0007others(6): Show | a0001c0001t0001a0002c0003t0001a0002c0003t0002others(16): Show | a0001c0001t0001g0251a0002c0003t0001g0007a0002c0003t0001g0011others(80): Show | 102 | 472 | 0.2161 | 2 | c.617 others(13): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 7/12 | chr21 | TogoVar | ||||||
TNK1_chr17_7376089_7394742 | 7387376 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00438.hp2 others(53): Show |
a0001a0003a0009others(3): Show | a0001c0001a0001c0002a0001c0031others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0031t0001others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0043a0001c0001t0001g0048others(15): Show | 56 | 452 | 0.1239 | 0 | c.139 others(6): Show |
TNK1 | ENSG00000174292.13 | transcript | ENST00000688331.1 | protein_coding | 9/12 | chr17 | TogoVar | ||||||
TRIM51G_chr11_48970498_48988885 | 48978871 | C | G | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(271): Show |
a0001a0003a0005others(5): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0006t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(74): Show | 274 | 424 | 0.6462 | 0 | c.738 others(5): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/6 | chr11 | TogoVar | ||||||
TUBA3E_chr2_130186745_130203439 | 130197356 | ACACACCT others(2467): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(174): Show |
a0001 | a0001c0002a0001c0005a0001c0011others(14): Show | a0001c0002t0002a0001c0005t0002a0001c0011t0002others(14): Show | a0001c0002t0002g0002a0001c0002t0002g0003a0001c0002t0002g0006others(31): Show | 177 | 428 | 0.4136 | -2474 | c.-14 others(11): Show |
TUBA3E | ENSG00000152086.9 | transcript | ENST00000312988.9 | protein_coding | 1/5 | chr2 | TogoVar | ||||||
UNCX_chr7_1227872_1242326 | 1236226 | A | AC | frameshift_variant | HIGH | HG01243.hp2 HG01361.hp2 HG02896.hp1 others(9): Show |
a0000 | a0000c0002a0000c0007 | a0000c0002t0001a0000c0002t0002a0000c0007t0001 | a0000c0002t0001g0001a0000c0002t0001g0002a0000c0002t0001g0004others(6): Show | 12 | 406 | 0.0296 | 1 | c.849 others(4): Show |
p.Ala others(5): Show |
UNCX | ENSG00000164853.9 | transcript | ENST00000316333.9 | protein_coding | 3/3 | 996/2091 | 850/1596 | 284/531 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
USP53_chr4_119207713_119300518 | 119292486 | A | ATAGAAAA others(3): Show |
frameshift_variant others(1): Show |
HIGH | NA18965.hp1 | a0009 | a0009c0020 | a0009c0020t0003 | a0009c0020t0003g0253 | 1 | 380 | 0.0026 | 10 | c.249 others(19): Show |
p.Glu others(5): Show |
USP53 | ENSG00000145390.12 | transcript | ENST00000692078.1 | protein_coding | 19/19 | 3611/6631 | 2509/3222 | 837/1073 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |
VCX3B_chrX_8459830_8471510 | 8464991 | G | A | splice_donor_variant others(1): Show |
HIGH | HG00280.hp1 HG00438.hp2 HG00558.hp1 others(134): Show |
a0000a0001a0003others(40): Show | a0000c0083a0001c0001a0001c0088others(48): Show | a0000c0083t0031a0001c0001t0001a0001c0001t0008others(61): Show | a0000c0083t0031g0037a0001c0001t0001g0001a0001c0001t0001g0014others(72): Show | 137 | 271 | 0.5055 | 0 | c.-14 others(6): Show |
VCX3B | ENSG00000205642.11 | transcript | ENST00000381032.6 | protein_coding | 1/2 | chrX | TogoVar | ||||||
VDR_chr12_47836537_47909994 | 47879112 | A | G | start_lost | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(236): Show |
a0001a0003a0004 | a0001c0001a0001c0003a0001c0006others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(67): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0016others(234): Show | 239 | 358 | 0.6676 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
VDR | ENSG00000111424.12 | transcript | ENST00000549336.6 | protein_coding | 3/10 | 125/4616 | 2/1284 | 1/427 | chr12 | TogoVar | ||
VWDE_chr7_12325885_12408865 | 12351642 | T | TA | frameshift_variant | HIGH | HG00099.hp1 HG00423.hp1 HG00558.hp1 others(69): Show |
a0002a0008a0011others(7): Show | a0002c0002a0002c0046a0002c0047others(9): Show | a0002c0002t0004a0002c0046t0004a0002c0047t0007others(11): Show | a0002c0002t0004g0001a0002c0002t0004g0002a0002c0002t0004g0003others(43): Show | 72 | 374 | 0.1925 | 1 | c.381 others(5): Show |
p.Lys others(6): Show |
VWDE | ENSG00000146530.15 | transcript | ENST00000275358.8 | protein_coding | 19/29 | 3965/5220 | 3816/4773 | 1272/1590 | chr7 | TogoVar | ||
VWDE_chr7_12325885_12408865 | 12375099 | G | A | stop_gained | HIGH | HG00099.hp1 HG00423.hp1 HG00558.hp1 others(70): Show |
a0002a0008a0011others(3): Show | a0002c0002a0002c0043a0002c0044others(12): Show | a0002c0002t0004a0002c0043t0005a0002c0044t0014others(12): Show | a0002c0002t0004g0001a0002c0002t0004g0002a0002c0002t0004g0003others(44): Show | 73 | 374 | 0.1952 | 0 | c.115 others(4): Show |
p.Arg others(4): Show |
VWDE | ENSG00000146530.15 | transcript | ENST00000275358.8 | protein_coding | 8/29 | 1302/5220 | 1153/4773 | 385/1590 | chr7 | TogoVar | ||
YBX1_chr1_42677418_42708805 | 42700882 | A | AC | frameshift_variant | HIGH | HG00621.hp1 HG00741.hp2 HG01243.hp1 others(4): Show |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0002a0002c0002t0004 | a0002c0002t0001g0022a0002c0002t0001g0023a0002c0002t0001g0049others(4): Show | 7 | 402 | 0.0174 | 1 | c.844 others(4): Show |
p.Arg others(5): Show |
YBX1 | ENSG00000065978.19 | transcript | ENST00000321358.12 | protein_coding | 7/8 | 993/2979 | 845/975 | 282/324 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
ZC2HC1C_chr14_75064641_75084988 | 75070618 | T | TA | frameshift_variant | HIGH | HG02040.hp2 NA18612.hp1 NA18945.hp2 others(4): Show |
a0004 | a0004c0004 | a0004c0004t0001 | a0004c0004t0001g0001a0004c0004t0001g0016 | 7 | 394 | 0.0178 | 1 | c.46d others(3): Show |
p.Met others(4): Show |
ZC2HC1C | ENSG00000119703.15 | transcript | ENST00000524913.3 | protein_coding | 2/3 | 175/3923 | 47/1371 | 16/456 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |
ZC3H3_chr8_143432659_143546447 | 143440217 | G | T | stop_gained | HIGH | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(50): Show |
a0003a0012a0013others(3): Show | a0003c0003a0003c0042a0003c0051others(5): Show | a0003c0003t0002a0003c0003t0006a0003c0042t0002others(6): Show | a0003c0003t0002g0078a0003c0003t0002g0079a0003c0003t0002g0081others(50): Show | 53 | 352 | 0.1506 | 0 | c.263 others(4): Show |
p.Ser others(4): Show |
ZC3H3 | ENSG00000014164.7 | transcript | ENST00000262577.6 | protein_coding | 11/12 | 2665/3270 | 2639/2847 | 880/948 | chr8 | TogoVar | ||
ZFYVE19_chr15_40802089_40820084 | 40807701 | T | TGGGGC | frameshift_variant | HIGH | HG00099.hp2 HG00544.hp2 HG00558.hp1 others(115): Show |
a0002a0005a0006others(1): Show | a0002c0002a0002c0016a0002c0017others(3): Show | a0002c0002t0003a0002c0002t0005a0002c0002t0008others(8): Show | a0002c0002t0003g0002a0002c0002t0003g0007a0002c0002t0003g0011others(23): Show | 118 | 382 | 0.3089 | 5 | c.118 others(12): Show |
p.Arg others(4): Show |
ZFYVE19 | ENSG00000166140.17 | transcript | ENST00000355341.8 | protein_coding | 1/11 | 624/2775 | 123/1416 | 41/471 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |
ZKSCAN4_chr6_28236697_28257269 | 28247094 | T | C | splice_acceptor_variant others(1): Show |
HIGH | NA18965.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0048 | 1 | 420 | 0.0024 | 0 | c.655 others(5): Show |
ZKSCAN4 | ENSG00000187626.9 | transcript | ENST00000377294.3 | protein_coding | 3/4 | chr6 | TogoVar | ||||||
ZNF185_chrX_152893067_152978474 | 152922181 | T | TG | frameshift_variant | HIGH | NA18965.hp1 | a0004 | a0004c0008 | a0004c0008t0002 | a0004c0008t0002g0147 | 1 | 260 | 0.0039 | 1 | c.667 others(4): Show |
p.Val others(5): Show |
ZNF185 | ENSG00000147394.20 | transcript | ENST00000695776.1 | protein_coding | 11/25 | 885/4587 | 668/2169 | 223/722 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZNF185_chrX_152893067_152978474 | 152928614 | AC | A | frameshift_variant | HIGH | NA18965.hp1 | a0004 | a0004c0008 | a0004c0008t0002 | a0004c0008t0002g0147 | 1 | 260 | 0.0039 | -1 | c.873 others(4): Show |
p.Arg others(5): Show |
ZNF185 | ENSG00000147394.20 | transcript | ENST00000695776.1 | protein_coding | 13/25 | 1090/4587 | 873/2169 | 291/722 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZNF185_chrX_152893067_152978474 | 152928626 | A | AC | frameshift_variant | HIGH | NA18965.hp1 | a0004 | a0004c0008 | a0004c0008t0002 | a0004c0008t0002g0147 | 1 | 260 | 0.0039 | 1 | c.883 others(4): Show |
p.Leu others(5): Show |
ZNF185 | ENSG00000147394.20 | transcript | ENST00000695776.1 | protein_coding | 13/25 | 1101/4587 | 884/2169 | 295/722 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZNF185_chrX_152893067_152978474 | 152931751 | AG | A | frameshift_variant | HIGH | NA18965.hp1 | a0004 | a0004c0008 | a0004c0008t0002 | a0004c0008t0002g0147 | 1 | 260 | 0.0039 | -1 | c.100 others(5): Show |
p.Ala others(5): Show |
ZNF185 | ENSG00000147394.20 | transcript | ENST00000695776.1 | protein_coding | 14/25 | 1217/4587 | 1000/2169 | 334/722 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZNF185_chrX_152893067_152978474 | 152932881 | C | CA | frameshift_variant | HIGH | NA18965.hp1 | a0004 | a0004c0008 | a0004c0008t0002 | a0004c0008t0002g0147 | 1 | 260 | 0.0039 | 1 | c.103 others(5): Show |
p.Gln others(5): Show |
ZNF185 | ENSG00000147394.20 | transcript | ENST00000695776.1 | protein_coding | 15/25 | 1250/4587 | 1033/2169 | 345/722 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZNF316_chr7_6632318_6663279 | 6653275 | C | CG | frameshift_variant | HIGH | HG02056.hp2 HG02080.hp2 NA18941.hp2 others(3): Show |
a0011a0012a0016others(1): Show | a0011c0013a0012c0015a0016c0023others(1): Show | a0011c0013t0002a0011c0013t0012a0012c0015t0003others(3): Show | a0011c0013t0002g0175a0011c0013t0012g0003a0012c0015t0003g0001others(3): Show | 6 | 422 | 0.0142 | 1 | c.168 others(5): Show |
p.Val others(5): Show |
ZNF316 | ENSG00000205903.7 | transcript | ENST00000382252.6 | protein_coding | 9/9 | 2242/7243 | 1682/3015 | 561/1004 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
ZNF316_chr7_6632318_6663279 | 6653564 | C | CG | frameshift_variant | HIGH | HG00597.hp2 HG01192.hp1 HG01934.hp2 others(5): Show |
a0009a0013a0017others(1): Show | a0009c0014a0009c0019a0013c0018others(2): Show | a0009c0014t0002a0009c0014t0074a0009c0019t0002others(4): Show | a0009c0014t0002g0016a0009c0014t0074g0172a0009c0019t0002g0030others(5): Show | 8 | 422 | 0.0190 | 1 | c.197 others(5): Show |
p.Ala others(5): Show |
ZNF316 | ENSG00000205903.7 | transcript | ENST00000382252.6 | protein_coding | 9/9 | 2533/7243 | 1973/3015 | 658/1004 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
ZNF444_chr19_56136287_56165893 | 56159891 | A | AC | frameshift_variant | HIGH | HG01496.hp2 NA18963.hp1 NA18965.hp1 others(3): Show |
a0003 | a0003c0006a0003c0008a0003c0014 | a0003c0006t0001a0003c0006t0002a0003c0008t0003others(2): Show | a0003c0006t0001g0001a0003c0006t0001g0127a0003c0006t0002g0012others(3): Show | 6 | 416 | 0.0144 | 1 | c.676 others(4): Show |
p.Arg others(5): Show |
ZNF444 | ENSG00000167685.15 | transcript | ENST00000337080.8 | protein_coding | 5/5 | 944/1943 | 677/984 | 226/327 | INFO_REALIGN_3_PRIME | chr19 | TogoVar |