regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PHKA2_chrX_18887298_18989114 | 18894278 | T | TC | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0016 | a0005c0016t0001 | a0005c0016t0001g0100 | 1 | 201 | 0.0050 | 1 | c.346 others(5): Show |
p.Met others(6): Show |
PHKA2 | ENSG00000044446.12 | transcript | ENST00000379942.5 | protein_coding | 32/33 | 3644/5077 | 3462/3708 | 1154/1235 | chrX | TogoVar | ||
PHKA2_chrX_18887298_18989114 | 18894345 | C | CG | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0016 | a0005c0016t0001 | a0005c0016t0001g0100 | 1 | 201 | 0.0050 | 1 | c.339 others(5): Show |
p.Gln others(6): Show |
PHKA2 | ENSG00000044446.12 | transcript | ENST00000379942.5 | protein_coding | 32/33 | 3577/5077 | 3395/3708 | 1132/1235 | chrX | TogoVar | ||
PHKA2_chrX_18887298_18989114 | 18897263 | C | CT | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0016 | a0005c0016t0001 | a0005c0016t0001g0100 | 1 | 201 | 0.0050 | 1 | c.318 others(10): Show |
p.Gly others(6): Show |
PHKA2 | ENSG00000044446.12 | transcript | ENST00000379942.5 | protein_coding | 30/33 | 3363/5077 | 3181/3708 | 1061/1235 | chrX | TogoVar | ||
PHKA2_chrX_18887298_18989114 | 18901541 | CG | C | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0016 | a0005c0016t0001 | a0005c0016t0001g0100 | 1 | 201 | 0.0050 | -1 | c.297 others(5): Show |
p.Gly others(5): Show |
PHKA2 | ENSG00000044446.12 | transcript | ENST00000379942.5 | protein_coding | 27/33 | 3152/5077 | 2970/3708 | 990/1235 | chrX | TogoVar | ||
PHKA2_chrX_18887298_18989114 | 18905782 | T | TC | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0016 | a0005c0016t0001 | a0005c0016t0001g0100 | 1 | 201 | 0.0050 | 1 | c.288 others(5): Show |
p.Lys others(5): Show |
PHKA2 | ENSG00000044446.12 | transcript | ENST00000379942.5 | protein_coding | 26/33 | 3065/5077 | 2883/3708 | 961/1235 | chrX | TogoVar | ||
PHKA2_chrX_18887298_18989114 | 18906734 | A | AC | splice_donor_variant others(1): Show |
HIGH | NA18974.hp1 | a0005 | a0005c0016 | a0005c0016t0001 | a0005c0016t0001g0100 | 1 | 201 | 0.0050 | 1 | c.267 others(7): Show |
PHKA2 | ENSG00000044446.12 | transcript | ENST00000379942.5 | protein_coding | 24/32 | chrX | TogoVar | ||||||
PIM2_chrX_48908182_48924024 | 48917809 | C | CG | frameshift_variant | HIGH | NA18974.hp1 | a0002 | a0002c0002 | a0002c0002t0010 | a0002c0002t0010g0026 | 1 | 278 | 0.0036 | 1 | c.193 others(4): Show |
p.Arg others(4): Show |
PIM2 | ENSG00000102096.10 | transcript | ENST00000376509.4 | protein_coding | 3/6 | 383/2075 | 193/936 | 65/311 | chrX | TogoVar | ||
PIM2_chrX_48908182_48924024 | 48917825 | TG | T | frameshift_variant | HIGH | NA18974.hp1 | a0002 | a0002c0002 | a0002c0002t0010 | a0002c0002t0010g0026 | 1 | 278 | 0.0036 | -1 | c.177 others(4): Show |
p.Ile others(4): Show |
PIM2 | ENSG00000102096.10 | transcript | ENST00000376509.4 | protein_coding | 3/6 | 367/2075 | 177/936 | 59/311 | chrX | TogoVar | ||
PITRM1_chr10_3132728_3177782 | 3166375 | T | TGCACGCT others(18): Show |
frameshift_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(277): Show |
a0001a0003a0006others(1): Show | a0001c0001a0001c0002a0001c0005others(43): Show | a0001c0001t0001a0001c0002t0001a0001c0005t0002others(44): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(208): Show | 280 | 446 | 0.6278 | 25 | c.271 others(32): Show |
p.Gln others(4): Show |
PITRM1 | ENSG00000107959.17 | transcript | ENST00000224949.9 | protein_coding | 4/27 | 281/3427 | 271/3114 | 91/1037 | chr10 | TogoVar | ||
PLEKHA2_chr8_38896346_38978912 | 38901439 | C | CG | splice_donor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(334): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0008others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(46): Show | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0015others(332): Show | 337 | 376 | 0.8963 | 1 | c.-24 others(6): Show |
PLEKHA2 | ENSG00000169499.15 | transcript | ENST00000617275.5 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
PLK5_chr19_1519077_1541046 | 1534043 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00280.hp1 HG00280.hp2 HG00408.hp1 others(207): Show |
a0001a0006a0007others(2): Show | a0001c0001a0001c0016a0001c0020others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0005others(160): Show | 210 | 430 | 0.4884 | 0 | c.825 others(5): Show |
PLK5 | ENSG00000185988.15 | transcript | ENST00000454744.7 | protein_coding | 13/13 | chr19 | TogoVar | ||||||
PLXNA3_chrX_154453281_154482779 | 154467144 | C | CACCA | frameshift_variant others(1): Show |
HIGH | NA18974.hp1 | a0014 | a0014c0018 | a0014c0018t0091 | a0014c0018t0091g0055 | 1 | 262 | 0.0038 | 4 | c.319 others(13): Show |
p.Thr others(6): Show |
PLXNA3 | ENSG00000130827.6 | transcript | ENST00000369682.4 | protein_coding | 18/33 | 3376/10885 | 3201/5616 | 1067/1871 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PNMA3_chrX_153051470_153065462 | 153057871 | A | AC | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0001 | 1 | 326 | 0.0031 | 1 | c.820 others(4): Show |
p.Leu others(5): Show |
PNMA3 | ENSG00000183837.10 | transcript | ENST00000593810.3 | protein_coding | 2/2 | 1096/3682 | 821/1392 | 274/463 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
POMZP3_chr7_76604986_76632279 | 76611468 | CA | C | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(209): Show |
a0000 | a0000c0002a0000c0004a0000c0005others(6): Show | a0000c0002t0002a0000c0002t0003a0000c0002t0004others(25): Show | a0000c0002t0002g0003a0000c0002t0002g0007a0000c0002t0002g0014others(183): Show | 212 | 423 | 0.5012 | -1 | c.560 others(4): Show |
p.Leu others(5): Show |
POMZP3 | ENSG00000146707.15 | transcript | ENST00000310842.9 | protein_coding | 6/7 | 1283/1528 | 560/564 | 187/187 | chr7 | TogoVar | ||
POTEC_chr18_14502339_14548600 | 14513787 | T | C | splice_acceptor_variant others(1): Show |
HIGH | HG00621.hp1 HG02735.hp1 HG03927.hp1 others(16): Show |
a0003a0012 | a0003c0004a0012c0014 | a0003c0004t0004a0003c0004t0050a0003c0004t0051others(1): Show | a0003c0004t0004g0002a0003c0004t0004g0003a0003c0004t0004g0020others(11): Show | 19 | 388 | 0.0490 | 0 | c.141 others(6): Show |
POTEC | ENSG00000183206.18 | transcript | ENST00000358970.10 | protein_coding | 9/10 | chr18 | TogoVar | ||||||
PRB3_chr12_11260914_11274707 | 11267400 | A | AG | frameshift_variant | HIGH | HG00544.hp1 HG00597.hp1 HG00597.hp2 others(77): Show |
a0003a0005a0007others(9): Show | a0003c0003a0005c0005a0007c0006others(9): Show | a0003c0003t0002a0005c0005t0002a0007c0006t0002others(9): Show | a0003c0003t0002g0004a0003c0003t0002g0023a0003c0003t0002g0033others(14): Show | 80 | 443 | 0.1806 | 1 | c.848 others(4): Show |
p.His others(5): Show |
PRB3 | ENSG00000197870.14 | transcript | ENST00000538488.3 | protein_coding | 3/4 | 886/1227 | 848/1056 | 283/351 | chr12 | TogoVar | ||
PRDX4_chrX_23662493_23691397 | 23675100 | TG | T | frameshift_variant | HIGH | NA18974.hp1 | a0006 | a0006c0003 | a0006c0003t0001 | a0006c0003t0001g0168 | 1 | 349 | 0.0029 | -1 | c.472 others(4): Show |
p.Ala others(5): Show |
PRDX4 | ENSG00000123131.13 | transcript | ENST00000379341.9 | protein_coding | 3/7 | 550/956 | 472/816 | 158/271 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRDX4_chrX_23662493_23691397 | 23679233 | A | AT | frameshift_variant | HIGH | NA18974.hp1 | a0006 | a0006c0003 | a0006c0003t0001 | a0006c0003t0001g0168 | 1 | 349 | 0.0029 | 1 | c.546 others(4): Show |
p.Gln others(5): Show |
PRDX4 | ENSG00000123131.13 | transcript | ENST00000379341.9 | protein_coding | 4/7 | 625/956 | 547/816 | 183/271 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRDX4_chrX_23662493_23691397 | 23679245 | A | AG | frameshift_variant | HIGH | NA18974.hp1 | a0006 | a0006c0003 | a0006c0003t0001 | a0006c0003t0001g0168 | 1 | 349 | 0.0029 | 1 | c.559 others(4): Show |
p.Asp others(5): Show |
PRDX4 | ENSG00000123131.13 | transcript | ENST00000379341.9 | protein_coding | 4/7 | 638/956 | 560/816 | 187/271 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRDX4_chrX_23662493_23691397 | 23679256 | G | GT | frameshift_variant | HIGH | NA18974.hp1 | a0006 | a0006c0003 | a0006c0003t0001 | a0006c0003t0001g0168 | 1 | 349 | 0.0029 | 1 | c.569 others(4): Show |
p.Tyr others(5): Show |
PRDX4 | ENSG00000123131.13 | transcript | ENST00000379341.9 | protein_coding | 4/7 | 648/956 | 570/816 | 190/271 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRDX4_chrX_23662493_23691397 | 23679266 | A | AG | frameshift_variant | HIGH | NA18974.hp1 | a0006 | a0006c0003 | a0006c0003t0001 | a0006c0003t0001g0168 | 1 | 349 | 0.0029 | 1 | c.580 others(4): Show |
p.Asp others(5): Show |
PRDX4 | ENSG00000123131.13 | transcript | ENST00000379341.9 | protein_coding | 4/7 | 659/956 | 581/816 | 194/271 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRPF3_chr1_150316533_150358233 | 150324880 | C | CTTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(303): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(297): Show | 306 | 362 | 0.8453 | 4 | c.-48 others(15): Show |
PRPF3 | ENSG00000117360.13 | transcript | ENST00000324862.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PSG7_chr19_42919132_42942207 | 42935542 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(373): Show |
a0001a0005a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(319): Show | 376 | 416 | 0.9039 | 0 | c.292 others(3): Show |
p.Arg others(3): Show |
PSG7 | ENSG00000221878.13 | transcript | ENST00000406070.7 | protein_coding | 2/6 | 423/2067 | 292/1260 | 98/419 | chr19 | TogoVar | ||
PSMA3_chr14_58239843_58277004 | 58270934 | T | A | stop_gained others(1): Show |
HIGH | NA18974.hp1 | a0002 | a0002c0005 | a0002c0005t0003 | a0002c0005t0003g0149 | 1 | 332 | 0.0030 | 0 | c.659 others(3): Show |
p.Leu others(4): Show |
PSMA3 | ENSG00000100567.13 | transcript | ENST00000216455.9 | protein_coding | 10/11 | 737/955 | 659/768 | 220/255 | chr14 | TogoVar | ||
PTPN23_chr3_47376021_47418435 | 47411089 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00558.hp2 others(132): Show |
a0002a0004a0005others(6): Show | a0002c0003a0002c0008a0002c0009others(19): Show | a0002c0003t0001a0002c0008t0001a0002c0008t0002others(20): Show | a0002c0003t0001g0001a0002c0003t0001g0002a0002c0003t0001g0012others(118): Show | 135 | 332 | 0.4066 | 1 | c.329 others(5): Show |
p.Arg others(6): Show |
PTPN23 | ENSG00000076201.16 | transcript | ENST00000265562.5 | protein_coding | 20/25 | 3373/5237 | 3297/4911 | 1099/1636 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |
PTTG1IP2_chr7_90464639_90518397 | 90487326 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00423.hp2 HG00438.hp2 others(69): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0235others(58): Show | 72 | 384 | 0.1875 | 0 | c.193 others(5): Show |
PTTG1IP2 | ENSG00000251154.2 | transcript | ENST00000509356.2 | protein_coding | 2/6 | chr7 | TogoVar | ||||||
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
RAB24_chr5_177296198_177308719 | 177303036 | TCCGACCG others(6): Show |
T | frameshift_variant | HIGH | NA18974.hp2 | a0002 | a0002c0003 | a0002c0003t0003 | a0002c0003t0003g0021 | 1 | 404 | 0.0025 | -13 | c.146 others(20): Show |
p.Val others(4): Show |
RAB24 | ENSG00000169228.14 | transcript | ENST00000303251.11 | protein_coding | 2/8 | 589/1588 | 146/612 | 49/203 | chr5 | TogoVar | ||
RABL2B_chr22_50762506_50788636 | 50769106 | G | A | stop_gained | HIGH | NA18974.hp2 NA19059.hp1 |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0058 | 2 | 476 | 0.0042 | 0 | c.526 others(3): Show |
p.Arg others(4): Show |
RABL2B | ENSG00000079974.19 | transcript | ENST00000691320.1 | protein_coding | 8/9 | 715/2149 | 526/690 | 176/229 | chr22 | TogoVar | ||
RAP2C_chrX_132198025_132224447 | 132217118 | A | AG | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0002 | a0005c0002t0063 | a0005c0002t0063g0142 | 1 | 235 | 0.0043 | 1 | c.150 others(4): Show |
p.Ser others(4): Show |
RAP2C | ENSG00000123728.10 | transcript | ENST00000370874.2 | protein_coding | 4/6 | 973/3972 | 150/552 | 50/183 | chrX | TogoVar | ||
RAP2C_chrX_132198025_132224447 | 132217217 | C | CA | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0002 | a0005c0002t0063 | a0005c0002t0063g0142 | 1 | 235 | 0.0043 | 1 | c.51d others(3): Show |
p.Ala others(4): Show |
RAP2C | ENSG00000123728.10 | transcript | ENST00000370874.2 | protein_coding | 4/6 | 874/3972 | 51/552 | 17/183 | chrX | TogoVar | ||
RAP2C_chrX_132198025_132224447 | 132217245 | C | CT | frameshift_variant | HIGH | NA18974.hp1 | a0005 | a0005c0002 | a0005c0002t0063 | a0005c0002t0063g0142 | 1 | 235 | 0.0043 | 1 | c.23_ others(6): Show |
p.Leu others(3): Show |
RAP2C | ENSG00000123728.10 | transcript | ENST00000370874.2 | protein_coding | 4/6 | 846/3972 | 23/552 | 8/183 | chrX | TogoVar | ||
RBBP7_chrX_16839341_16875362 | 16845047 | T | TC | frameshift_variant | HIGH | NA18974.hp1 | a0000 | a0000c0006 | a0000c0006t0013 | a0000c0006t0013g0161 | 1 | 316 | 0.0032 | 1 | c.126 others(5): Show |
p.Gln others(5): Show |
RBBP7 | ENSG00000102054.18 | transcript | ENST00000380087.7 | protein_coding | 12/12 | 1574/2281 | 1265/1278 | 422/425 | chrX | TogoVar | ||
RBM10_chrX_47140221_47191813 | 47147350 | T | TC | splice_acceptor_variant others(1): Show |
HIGH | NA18974.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0157 | 1 | 226 | 0.0044 | 1 | c.-12 others(7): Show |
RBM10 | ENSG00000182872.16 | transcript | ENST00000377604.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
RENBP_chrX_153930269_153949643 | 153935285 | T | TC | frameshift_variant | HIGH | NA18974.hp1 | a0015 | a0015c0022 | a0015c0022t0001 | a0015c0022t0001g0076 | 1 | 297 | 0.0034 | 1 | c.128 others(8): Show |
p.Ter others(5): Show |
RENBP | ENSG00000102032.13 | transcript | ENST00000393700.8 | protein_coding | 11/11 | 1317/1334 | 1284/1284 | 428/427 | chrX | TogoVar | ||
RENBP_chrX_153930269_153949643 | 153935350 | A | AG | frameshift_variant | HIGH | NA18955.hp1 NA18974.hp1 |
a0014a0015 | a0014c0021a0015c0022 | a0014c0021t0002a0015c0022t0001 | a0014c0021t0002g0157a0015c0022t0001g0076 | 2 | 297 | 0.0067 | 1 | c.121 others(5): Show |
p.Leu others(5): Show |
RENBP | ENSG00000102032.13 | transcript | ENST00000393700.8 | protein_coding | 11/11 | 1252/1334 | 1219/1284 | 407/427 | chrX | TogoVar | ||
RENBP_chrX_153930269_153949643 | 153935520 | C | CA | frameshift_variant | HIGH | NA18974.hp1 | a0015 | a0015c0022 | a0015c0022t0001 | a0015c0022t0001g0076 | 1 | 297 | 0.0034 | 1 | c.113 others(5): Show |
p.Ala others(5): Show |
RENBP | ENSG00000102032.13 | transcript | ENST00000393700.8 | protein_coding | 10/11 | 1166/1334 | 1133/1284 | 378/427 | chrX | TogoVar | ||
RENBP_chrX_153930269_153949643 | 153935573 | G | GA | frameshift_variant others(1): Show |
HIGH | NA18974.hp1 | a0015 | a0015c0022 | a0015c0022t0001 | a0015c0022t0001g0076 | 1 | 297 | 0.0034 | 1 | c.108 others(5): Show |
p.Arg others(5): Show |
RENBP | ENSG00000102032.13 | transcript | ENST00000393700.8 | protein_coding | 10/11 | 1113/1334 | 1080/1284 | 360/427 | chrX | TogoVar | ||
RHOXF2_chrX_120153613_120170630 | 120163606 | G | GA | frameshift_variant | HIGH | NA18974.hp1 | a0009 | a0009c0011 | a0009c0011t0028 | a0009c0011t0028g0049 | 1 | 177 | 0.0057 | 1 | c.687 others(4): Show |
p.Asp others(5): Show |
RHOXF2 | ENSG00000131721.6 | transcript | ENST00000371388.5 | protein_coding | 4/4 | 826/2848 | 688/867 | 230/288 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RPS6KL1_chr14_74898951_74928260 | 74921455 | G | T | stop_gained | HIGH | NA18974.hp1 | a0006 | a0006c0009 | a0006c0009t0002 | a0006c0009t0002g0157 | 1 | 370 | 0.0027 | 0 | c.87C others(2): Show |
p.Tyr others(3): Show |
RPS6KL1 | ENSG00000198208.12 | transcript | ENST00000557413.6 | protein_coding | 3/12 | 696/5322 | 87/1650 | 29/549 | chr14 | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAA | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00639.hp2 others(99): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0012a0003c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0006others(97): Show | 102 | 386 | 0.2643 | 2 | c.100 others(15): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00544.hp1 HG00558.hp2 others(101): Show |
a0001a0006a0007 | a0001c0001a0001c0004a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0010others(101): Show | 104 | 386 | 0.2694 | 3 | c.100 others(16): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SASH3_chrX_129774949_129800201 | 129790941 | CA | C | frameshift_variant others(1): Show |
HIGH | NA18974.hp1 | a0007 | a0007c0008 | a0007c0008t0012 | a0007c0008t0012g0098 | 1 | 307 | 0.0033 | -1 | c.303 others(4): Show |
p.Asp others(5): Show |
SASH3 | ENSG00000122122.10 | transcript | ENST00000356892.4 | protein_coding | 4/8 | 452/2661 | 303/1143 | 101/380 | chrX | TogoVar | ||
SASH3_chrX_129774949_129800201 | 129790978 | TC | T | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0008 | a0007c0008t0012 | a0007c0008t0012g0098 | 1 | 307 | 0.0033 | -1 | c.341 others(4): Show |
p.Pro others(5): Show |
SASH3 | ENSG00000122122.10 | transcript | ENST00000356892.4 | protein_coding | 4/8 | 490/2661 | 341/1143 | 114/380 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SASH3_chrX_129774949_129800201 | 129791053 | TC | T | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0008 | a0007c0008t0012 | a0007c0008t0012g0098 | 1 | 307 | 0.0033 | -1 | c.416 others(4): Show |
p.Pro others(5): Show |
SASH3 | ENSG00000122122.10 | transcript | ENST00000356892.4 | protein_coding | 4/8 | 565/2661 | 416/1143 | 139/380 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SCRN3_chr2_174390730_174434575 | 174427852 | TTCAAATT others(6): Show |
T | frameshift_variant | HIGH | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(85): Show |
a0000 | a0000c0002a0000c0004a0000c0008 | a0000c0002t0002a0000c0002t0004a0000c0002t0012others(2): Show | a0000c0002t0002g0002a0000c0002t0002g0009a0000c0002t0002g0010others(47): Show | 88 | 364 | 0.2418 | -13 | c.125 others(22): Show |
p.Asn others(5): Show |
SCRN3 | ENSG00000144306.15 | transcript | ENST00000272732.11 | protein_coding | 8/8 | 1348/3052 | 1251/1275 | 417/424 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SERPINB11_chr18_63697960_63728893 | 63712604 | G | T | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(201): Show |
a0001a0004a0013 | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0005t0002a0001c0005t0005others(18): Show | a0001c0002t0001g0001a0001c0002t0001g0010a0001c0002t0001g0014others(79): Show | 204 | 422 | 0.4834 | 0 | c.268 others(3): Show |
p.Glu others(3): Show |
SERPINB11 | ENSG00000206072.13 | transcript | ENST00000544088.6 | protein_coding | 4/8 | 330/1735 | 268/1179 | 90/392 | chr18 | TogoVar | ||
SIGLEC12_chr19_51486227_51506800 | 51501537 | G | GC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(226): Show |
a0001a0003a0005others(3): Show | a0001c0002a0001c0003a0001c0010others(23): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0005others(27): Show | a0001c0002t0001g0001a0001c0002t0001g0004a0001c0002t0001g0012others(92): Show | 229 | 432 | 0.5301 | 1 | c.196 others(4): Show |
p.Ala others(4): Show |
SIGLEC12 | ENSG00000254521.7 | transcript | ENST00000291707.8 | protein_coding | 1/8 | 263/2269 | 196/1788 | 66/595 | chr19 | TogoVar | ||
SIRT4_chr12_120297321_120318249 | 120312031 | CCAGCACT others(1243): Show |
C | exon_loss_variant | HIGH | NA18974.hp2 | a0000 | a0000c0006 | a0000c0006t0003 | a0000c0006t0003g0067 | 1 | 380 | 0.0026 | -1250 | c.498 others(12): Show |
SIRT4 | ENSG00000089163.4 | transcript | ENST00000202967.4 | protein_coding | 3/4 | chr12 | TogoVar |