regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RBM10_chrX_47140221_47191813 | 47171113 | T | TC | frameshift_variant | HIGH | NA18985.hp1 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0211 | 1 | 226 | 0.0044 | 1 | c.292 others(4): Show |
p.Arg others(4): Show |
RBM10 | ENSG00000182872.16 | transcript | ENST00000377604.8 | protein_coding | 4/24 | 683/3397 | 293/2793 | 98/930 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RBMX2_chrX_130396987_130418656 | 130402254 | GC | G | frameshift_variant others(1): Show |
HIGH | NA18985.hp1 | a0003 | a0003c0006 | a0003c0006t0001 | a0003c0006t0001g0072 | 1 | 305 | 0.0033 | -1 | c.8de others(2): Show |
p.Pro others(3): Show |
RBMX2 | ENSG00000134597.17 | transcript | ENST00000305536.11 | protein_coding | 2/6 | 54/1823 | 8/969 | 3/322 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RBMXL2_chr11_7083998_7096148 | 7089456 | C | CG | frameshift_variant | HIGH | HG00621.hp1 HG00642.hp2 HG01099.hp2 others(39): Show |
a0003a0005a0010others(1): Show | a0003c0004a0003c0005a0003c0011others(4): Show | a0003c0004t0001a0003c0004t0002a0003c0004t0003others(9): Show | a0003c0004t0001g0000a0003c0004t0002g0000a0003c0004t0003g0000others(9): Show | 42 | 460 | 0.0913 | 1 | c.341 others(4): Show |
p.Gly others(5): Show |
RBMXL2 | ENSG00000170748.7 | transcript | ENST00000306904.7 | protein_coding | 1/1 | 465/2151 | 342/1179 | 114/392 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
RHBG_chr1_156364211_156390219 | 156384556 | T | TC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(229): Show |
a0002a0003a0005others(9): Show | a0002c0002a0002c0008a0003c0004others(16): Show | a0002c0002t0001a0002c0008t0001a0003c0004t0001others(16): Show | a0002c0002t0001g0003a0002c0002t0001g0011a0002c0002t0001g0014others(130): Show | 232 | 438 | 0.5297 | 1 | c.127 others(5): Show |
p.Asp others(5): Show |
RHBG | ENSG00000132677.13 | transcript | ENST00000537040.6 | protein_coding | 9/10 | 1311/1790 | 1272/1377 | 424/458 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
RNF17_chr13_24759169_24884921 | 24850445 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00673.hp2 HG01943.hp1 HG01993.hp2 others(32): Show |
a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0001a0005c0005t0001g0026a0005c0005t0001g0095others(31): Show | 35 | 426 | 0.0822 | 0 | c.320 others(6): Show |
RNF17 | ENSG00000132972.19 | transcript | ENST00000255324.10 | protein_coding | 23/35 | chr13 | TogoVar | ||||||
RP1L1_chr8_10601349_10660143 | 10610071 | C | CTTTAGTC others(90): Show |
frameshift_variant others(1): Show |
HIGH | NA18985.hp1 | a0008 | a0008c0145 | a0008c0145t0002 | a0008c0145t0002g0180 | 1 | 414 | 0.0024 | 97 | c.402 others(106): Show |
p.Glu others(6): Show |
RP1L1 | ENSG00000183638.6 | transcript | ENST00000382483.4 | protein_coding | 4/4 | 4291/8014 | 4026/7203 | 1342/2400 | chr8 | TogoVar | ||
RP1L1_chr8_10601349_10660143 | 10622785 | T | TG | frameshift_variant | HIGH | HG02074.hp1 NA18941.hp2 NA18954.hp2 others(7): Show |
a0008 | a0008c0138a0008c0139a0008c0140others(7): Show | a0008c0138t0003a0008c0139t0002a0008c0140t0002others(7): Show | a0008c0138t0003g0346a0008c0139t0002g0116a0008c0140t0002g0044others(7): Show | 10 | 414 | 0.0242 | 1 | c.416 others(4): Show |
p.Gly others(5): Show |
RP1L1 | ENSG00000183638.6 | transcript | ENST00000382483.4 | protein_coding | 2/4 | 681/8014 | 416/7203 | 139/2400 | chr8 | TogoVar | ||
RPS4X_chrX_72267042_72282248 | 72273882 | C | CG | frameshift_variant | HIGH | NA18985.hp1 | a0004 | a0004c0005 | a0004c0005t0002 | a0004c0005t0002g0034 | 1 | 316 | 0.0032 | 1 | c.450 others(4): Show |
p.Asp others(5): Show |
RPS4X | ENSG00000198034.11 | transcript | ENST00000316084.10 | protein_coding | 5/7 | 503/1474 | 450/792 | 150/263 | chrX | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00544.hp1 HG00558.hp2 others(101): Show |
a0001a0006a0007 | a0001c0001a0001c0004a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0010others(101): Show | 104 | 386 | 0.2694 | 3 | c.100 others(16): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SCAPER_chr15_76342904_76910340 | 76883817 | T | C | start_lost | HIGH | HG00140.hp2 HG00544.hp2 HG00597.hp1 others(114): Show |
a0002a0003a0005others(4): Show | a0002c0002a0002c0022a0003c0003others(5): Show | a0002c0002t0002a0002c0022t0002a0003c0003t0002others(9): Show | a0002c0002t0002g0190a0002c0002t0002g0194a0002c0002t0002g0219others(114): Show | 117 | 312 | 0.3750 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 2/32 | 102/5033 | 1/4203 | 1/1400 | chr15 | TogoVar | ||
SH3RF2_chr5_145931578_146068292 | 146056130 | TAGTCAAC others(3): Show |
T | frameshift_variant | HIGH | NA18985.hp1 | a0017 | a0017c0015 | a0017c0015t0002 | a0017c0015t0002g0184 | 1 | 272 | 0.0037 | -10 | c.147 others(19): Show |
p.Ile others(5): Show |
SH3RF2 | ENSG00000156463.18 | transcript | ENST00000359120.9 | protein_coding | 8/10 | 1696/3004 | 1473/2190 | 491/729 | chr5 | TogoVar | ||
SLAIN1_chr13_77692687_77769229 | 77698132 | T | TGG | frameshift_variant | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(296): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(279): Show | 299 | 300 | 0.9967 | 2 | c.220 others(9): Show |
p.Leu others(4): Show |
SLAIN1 | ENSG00000139737.23 | transcript | ENST00000418532.6 | protein_coding | 1/7 | 449/3009 | 222/1773 | 74/590 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |
SLAIN1_chr13_77692687_77769229 | 77698141 | G | GC | frameshift_variant | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(296): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(279): Show | 299 | 300 | 0.9967 | 1 | c.230 others(4): Show |
p.Leu others(4): Show |
SLAIN1 | ENSG00000139737.23 | transcript | ENST00000418532.6 | protein_coding | 1/7 | 458/3009 | 231/1773 | 77/590 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |
SLC22A14_chr3_38277294_38323575 | 38307252 | A | C | splice_acceptor_variant others(1): Show |
HIGH | HG00609.hp1 HG00621.hp1 HG00735.hp2 others(42): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0019a0001c0001t0001g0024a0001c0001t0001g0199others(35): Show | 45 | 406 | 0.1108 | 0 | c.517 others(5): Show |
SLC22A14 | ENSG00000144671.11 | transcript | ENST00000448498.6 | protein_coding | 2/10 | chr3 | TogoVar | ||||||
SLC22A31_chr16_89190761_89205537 | 89196258 | GCCTGGCC others(74): Show |
G | frameshift_variant others(3): Show |
HIGH | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(170): Show |
a0002a0005a0006others(4): Show | a0002c0002a0002c0004a0002c0007others(9): Show | a0002c0002t0001a0002c0002t0002a0002c0004t0001others(10): Show | a0002c0002t0001g0002a0002c0002t0001g0010a0002c0002t0001g0014others(30): Show | 173 | 428 | 0.4042 | -81 | c.103 others(93): Show |
p.Arg others(5): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 9/9 | 1117/1615 | 1035/1341 | 345/446 | chr16 | TogoVar | ||
SLC22A31_chr16_89190761_89205537 | 89198106 | GGGGCCCC others(11): Show |
G | splice_donor_variant others(3): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00438.hp2 others(28): Show |
a0004a0017 | a0004c0006a0004c0009a0017c0022 | a0004c0006t0001a0004c0009t0001a0017c0022t0001 | a0004c0006t0001g0006a0004c0006t0001g0029a0004c0009t0001g0008others(1): Show | 31 | 428 | 0.0724 | -18 | c.920 others(28): Show |
p.Gln others(19): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 7/9 | 920/1341 | 307/446 | chr16 | TogoVar | |||
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar | ||
SLC6A18_chr5_1220381_1251189 | 1240642 | C | G | stop_gained | HIGH | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(178): Show |
a0001a0006a0007others(4): Show | a0001c0002a0001c0005a0001c0009others(16): Show | a0001c0002t0001a0001c0002t0002a0001c0005t0001others(22): Show | a0001c0002t0001g0004a0001c0002t0001g0018a0001c0002t0001g0019others(157): Show | 181 | 456 | 0.3969 | 0 | c.957 others(3): Show |
p.Tyr others(4): Show |
SLC6A18 | ENSG00000164363.10 | transcript | ENST00000324642.4 | protein_coding | 7/12 | 1054/2095 | 957/1887 | 319/628 | chr5 | TogoVar | ||
SLFNL1_chr1_41010597_41026725 | 41017902 | A | AC | frameshift_variant | HIGH | HG00544.hp2 HG00673.hp1 HG00673.hp2 others(57): Show |
a0002a0005a0007others(3): Show | a0002c0002a0002c0022a0005c0007others(6): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(11): Show | a0002c0002t0001g0007a0002c0002t0001g0022a0002c0002t0001g0029others(24): Show | 60 | 430 | 0.1395 | 1 | c.689 others(4): Show |
p.Ser others(5): Show |
SLFNL1 | ENSG00000171790.16 | transcript | ENST00000302946.13 | protein_coding | 4/6 | 917/1961 | 689/1224 | 230/407 | chr1 | TogoVar | ||
SMARCA1_chrX_129441506_129528490 | 129468800 | A | AT | frameshift_variant | HIGH | NA18985.hp2 | a0005 | a0005c0006 | a0005c0006t0002 | a0005c0006t0002g0043 | 1 | 279 | 0.0036 | 1 | c.267 others(5): Show |
p.Ser others(5): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 21/25 | 2790/3989 | 2670/3213 | 890/1070 | chrX | TogoVar | ||
SMARCA2_chr9_2010347_2198620 | 2086946 | A | AC | frameshift_variant | HIGH | HG00642.hp1 HG00741.hp2 HG01928.hp2 others(6): Show |
a0005a0021 | a0005c0018a0005c0019a0005c0028others(2): Show | a0005c0018t0001a0005c0018t0002a0005c0019t0001others(4): Show | a0005c0018t0001g0179a0005c0018t0001g0231a0005c0018t0002g0246others(6): Show | 9 | 316 | 0.0285 | 1 | c.264 others(5): Show |
p.Leu others(5): Show |
SMARCA2 | ENSG00000080503.25 | transcript | ENST00000349721.8 | protein_coding | 18/34 | 2743/5748 | 2649/4773 | 883/1590 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |
SNX27_chr1_151607050_151704080 | 151692406 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp2 HG00280.hp1 HG00408.hp1 others(82): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(48): Show | a0001c0001t0001g0113a0001c0001t0001g0117a0001c0001t0001g0118others(82): Show | 85 | 366 | 0.2322 | 1 | c.124 others(7): Show |
SNX27 | ENSG00000143376.14 | transcript | ENST00000458013.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SOAT2_chr12_53098486_53129535 | 53115655 | G | T | splice_donor_variant others(1): Show |
HIGH | NA18985.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0213 | 1 | 410 | 0.0024 | 0 | c.708 others(5): Show |
SOAT2 | ENSG00000167780.12 | transcript | ENST00000301466.8 | protein_coding | 6/14 | chr12 | TogoVar | ||||||
SOX9_chr17_72116020_72131416 | 72123889 | A | AC | frameshift_variant | HIGH | HG01496.hp1 HG02071.hp2 HG02145.hp1 others(8): Show |
a0000 | a0000c0003a0000c0008a0000c0015 | a0000c0003t0001a0000c0003t0002a0000c0003t0003others(6): Show | a0000c0003t0001g0002a0000c0003t0002g0001a0000c0003t0003g0001others(6): Show | 11 | 402 | 0.0274 | 1 | c.103 others(5): Show |
p.Gln others(5): Show |
SOX9 | ENSG00000125398.8 | transcript | ENST00000245479.3 | protein_coding | 3/3 | 1410/3931 | 1038/1530 | 346/509 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
SPATA21_chr1_16393643_16442424 | 16398776 | G | A | stop_gained | HIGH | NA18940.hp2 NA18945.hp1 NA18961.hp2 others(6): Show |
a0006 | a0006c0006 | a0006c0006t0001a0006c0006t0002 | a0006c0006t0001g0120a0006c0006t0002g0276a0006c0006t0002g0277others(6): Show | 9 | 352 | 0.0256 | 0 | c.139 others(4): Show |
p.Arg others(4): Show |
SPATA21 | ENSG00000187144.11 | transcript | ENST00000335496.5 | protein_coding | 13/13 | 1882/2015 | 1399/1410 | 467/469 | chr1 | TogoVar | ||
SPDYE21_chr7_67271941_67294005 | 67281505 | T | TGGGTGGC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00558.hp1 others(128): Show |
a0002a0009a0012others(2): Show | a0002c0002a0002c0010a0009c0011others(3): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0017others(6): Show | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0002t0001g0004others(50): Show | 131 | 460 | 0.2848 | 7 | c.514 others(14): Show |
p.Glu others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 4/9 | 1065/3286 | 521/1209 | 174/402 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
SPDYE2_chr7_102546226_102568538 | 102551289 | G | C | splice_donor_variant others(1): Show |
HIGH | HG00609.hp2 HG01070.hp1 HG01515.hp2 others(24): Show |
a0001a0002a0003others(7): Show | a0001c0001a0002c0002a0003c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0015others(11): Show | a0001c0001t0001g0021a0001c0001t0001g0027a0001c0001t0001g0028others(24): Show | 27 | 164 | 0.1646 | 0 | c.-42 others(6): Show |
SPDYE2 | ENSG00000205238.12 | transcript | ENST00000691607.2 | protein_coding | 1/8 | chr7 | TogoVar | ||||||
SPON2_chr4_1161932_1177583 | 1171887 | A | AG | frameshift_variant | HIGH | HG01074.hp1 HG01257.hp2 HG01978.hp2 others(15): Show |
a0004a0006 | a0004c0006a0004c0009a0004c0012others(4): Show | a0004c0006t0001a0004c0009t0001a0004c0012t0001others(4): Show | a0004c0006t0001g0010a0004c0006t0001g0017a0004c0009t0001g0024others(6): Show | 18 | 432 | 0.0417 | 1 | c.184 others(4): Show |
p.Leu others(4): Show |
SPON2 | ENSG00000159674.12 | transcript | ENST00000290902.10 | protein_coding | 2/6 | 227/1579 | 184/996 | 62/331 | chr4 | TogoVar | ||
SPSB2_chr12_6865935_6878303 | 6872998 | C | T | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00544.hp2 HG00609.hp2 others(74): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0016others(7): Show | 77 | 398 | 0.1935 | 0 | c.-96 others(5): Show |
SPSB2 | ENSG00000111671.10 | transcript | ENST00000524270.6 | protein_coding | 1/2 | chr12 | TogoVar | ||||||
SRSF3_chr6_36589362_36610600 | 36601940 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00438.hp2 HG00544.hp2 others(95): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0021a0001c0001t0001g0045a0001c0001t0001g0051others(85): Show | 98 | 382 | 0.2565 | 1 | c.468 others(6): Show |
SRSF3 | ENSG00000112081.17 | transcript | ENST00000373715.11 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
TAMALIN_chr12_52001946_52020889 | 52014908 | G | GC | frameshift_variant | HIGH | HG00423.hp1 HG00597.hp2 HG00621.hp1 others(32): Show |
a0002a0005 | a0002c0002a0002c0006a0005c0013 | a0002c0002t0001a0002c0002t0002a0002c0006t0001others(1): Show | a0002c0002t0001g0001a0002c0002t0001g0002a0002c0002t0001g0003others(15): Show | 35 | 380 | 0.0921 | 1 | c.902 others(4): Show |
p.Pro others(5): Show |
TAMALIN | ENSG00000161835.11 | transcript | ENST00000293662.9 | protein_coding | 8/8 | 977/1952 | 903/1188 | 301/395 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |
TBC1D31_chr8_123067707_123157153 | 123142457 | G | T | splice_donor_variant others(1): Show |
HIGH | HG00323.hp2 HG00423.hp2 HG00438.hp2 others(86): Show |
a0001a0002a0010 | a0001c0001a0001c0003a0001c0008others(6): Show | a0001c0001t0001a0001c0003t0001a0001c0008t0001others(6): Show | a0001c0001t0001g0003a0001c0001t0001g0043a0001c0001t0001g0162others(85): Show | 89 | 322 | 0.2764 | 0 | c.283 others(6): Show |
TBC1D31 | ENSG00000156787.17 | transcript | ENST00000287380.6 | protein_coding | 19/21 | chr8 | TogoVar | ||||||
TBKBP1_chr17_47689161_47717052 | 47708849 | T | TC | frameshift_variant | HIGH | HG00621.hp1 HG00642.hp1 HG00673.hp1 others(5): Show |
a0007a0009a0016 | a0007c0008a0009c0010a0016c0022 | a0007c0008t0001a0009c0010t0001a0016c0022t0001 | a0007c0008t0001g0003a0007c0008t0001g0069a0007c0008t0001g0097others(5): Show | 8 | 386 | 0.0207 | 1 | c.111 others(5): Show |
p.Val others(5): Show |
TBKBP1 | ENSG00000198933.11 | transcript | ENST00000578982.6 | protein_coding | 9/10 | 1188/3342 | 1120/1848 | 374/615 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
TBKBP1_chr17_47689161_47717052 | 47709026 | G | GC | frameshift_variant | HIGH | HG00438.hp1 HG00621.hp1 HG00621.hp2 others(37): Show |
a0002a0003a0007others(6): Show | a0002c0005a0002c0011a0002c0023others(10): Show | a0002c0005t0001a0002c0005t0005a0002c0011t0001others(12): Show | a0002c0005t0001g0003a0002c0005t0001g0007a0002c0005t0001g0022others(36): Show | 40 | 386 | 0.1036 | 1 | c.129 others(5): Show |
p.Pro others(5): Show |
TBKBP1 | ENSG00000198933.11 | transcript | ENST00000578982.6 | protein_coding | 9/10 | 1367/3342 | 1299/1848 | 433/615 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |
TCHHL1_chr1_152079141_152094064 | 152085716 | G | A | stop_gained | HIGH | HG00642.hp2 HG01167.hp1 HG01169.hp1 others(26): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0002 | 29 | 376 | 0.0771 | 0 | c.196 others(4): Show |
p.Gln others(4): Show |
TCHHL1 | ENSG00000182898.4 | transcript | ENST00000368806.2 | protein_coding | 3/3 | 2031/3606 | 1966/2715 | 656/904 | chr1 | TogoVar | ||
TFDP3_chrX_133211662_133223354 | 133217319 | A | AGGTCTTC others(22): Show |
frameshift_variant | HIGH | NA18985.hp1 | a0007 | a0007c0008 | a0007c0008t0002 | a0007c0008t0002g0000 | 1 | 256 | 0.0039 | 29 | c.912 others(36): Show |
p.Leu others(5): Show |
TFDP3 | ENSG00000183434.10 | transcript | ENST00000310125.5 | protein_coding | 1/1 | 1035/1693 | 940/1218 | 314/405 | chrX | TogoVar | ||
TGIF2LY_chrY_3574067_3585041 | 3579632 | G | GC | frameshift_variant | HIGH | NA18985.hp1 | a0000 | a0000c0003 | a0000c0003t0002 | a0000c0003t0002g0002 | 1 | 131 | 0.0076 | 1 | c.391 others(4): Show |
p.His others(5): Show |
TGIF2LY | ENSG00000176679.9 | transcript | ENST00000321217.5 | protein_coding | 2/2 | 474/879 | 392/558 | 131/185 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
TKTL1_chrX_154290795_154335350 | 154310958 | TG | T | frameshift_variant | HIGH | NA18985.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0145 | 1 | 272 | 0.0037 | -1 | c.476 others(4): Show |
p.Gly others(5): Show |
TKTL1 | ENSG00000007350.18 | transcript | ENST00000369915.8 | protein_coding | 4/13 | 541/2518 | 476/1791 | 159/596 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TLR8_chrX_12901620_12928169 | 12906707 | A | G | start_lost others(1): Show |
HIGH | HG00099.hp2 HG00423.hp1 HG00438.hp1 others(162): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0004a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0008a0001c0004t0001others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0011others(44): Show | 165 | 303 | 0.5446 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
TLR8 | ENSG00000101916.12 | transcript | ENST00000218032.7 | protein_coding | 1/2 | 88/4216 | 1/3126 | 1/1041 | chrX | TogoVar | ||
TPST2_chr22_26516996_26595132 | 26541248 | A | AC | frameshift_variant | HIGH | HG00597.hp2 HG00621.hp1 HG00673.hp2 others(23): Show |
a0002 | a0002c0002a0002c0011a0002c0012others(1): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(12): Show | a0002c0002t0001g0012a0002c0002t0001g0026a0002c0002t0001g0092others(23): Show | 26 | 400 | 0.0650 | 1 | c.382 others(4): Show |
p.Val others(5): Show |
TPST2 | ENSG00000128294.16 | transcript | ENST00000338754.9 | protein_coding | 3/7 | 622/5653 | 382/1134 | 128/377 | chr22 | TogoVar | ||
TRIM51G_chr11_48970498_48988885 | 48978871 | C | G | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(271): Show |
a0001a0003a0005others(5): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0006t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(74): Show | 274 | 424 | 0.6462 | 0 | c.738 others(5): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/6 | chr11 | TogoVar | ||||||
TRIM51G_chr11_48970498_48988885 | 48979006 | G | A | stop_gained | HIGH | HG00099.hp1 HG00408.hp1 HG00438.hp1 others(136): Show |
a0002a0012a0013 | a0002c0002a0002c0004a0002c0015others(3): Show | a0002c0002t0002a0002c0004t0002a0002c0015t0002others(3): Show | a0002c0002t0002g0005a0002c0002t0002g0007a0002c0002t0002g0009others(58): Show | 139 | 424 | 0.3278 | 0 | c.604 others(3): Show |
p.Gln others(4): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/7 | 755/1510 | 604/1359 | 202/452 | chr11 | TogoVar | ||
TSC22D3_chrX_107708221_107780787 | 107775222 | G | GA | frameshift_variant | HIGH | NA18985.hp2 | a0002 | a0002c0003 | a0002c0003t0007 | a0002c0003t0007g0207 | 1 | 216 | 0.0046 | 1 | c.197 others(8): Show |
p.Ser others(4): Show |
TSC22D3 | ENSG00000157514.18 | transcript | ENST00000372383.9 | protein_coding | 1/3 | 565/2269 | 197/603 | 66/200 | chrX | TogoVar | ||
TSC22D3_chrX_107708221_107780787 | 107775381 | GC | G | frameshift_variant | HIGH | NA18985.hp2 | a0002 | a0002c0003 | a0002c0003t0007 | a0002c0003t0007g0207 | 1 | 216 | 0.0046 | -1 | c.38d others(3): Show |
p.Gly others(4): Show |
TSC22D3 | ENSG00000157514.18 | transcript | ENST00000372383.9 | protein_coding | 1/3 | 406/2269 | 38/603 | 13/200 | chrX | TogoVar | ||
TSPAN7_chrX_38556542_38693918 | 38681226 | G | GT | frameshift_variant | HIGH | NA18985.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0173 | 1 | 223 | 0.0045 | 1 | c.623 others(4): Show |
p.Met others(5): Show |
TSPAN7 | ENSG00000156298.13 | transcript | ENST00000378482.7 | protein_coding | 6/8 | 629/1742 | 624/750 | 208/249 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TUBA3E_chr2_130186745_130203439 | 130197356 | ACACACCT others(2467): Show |
A | exon_loss_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(174): Show |
a0001 | a0001c0002a0001c0005a0001c0011others(14): Show | a0001c0002t0002a0001c0005t0002a0001c0011t0002others(14): Show | a0001c0002t0002g0002a0001c0002t0002g0003a0001c0002t0002g0006others(31): Show | 177 | 428 | 0.4136 | -2474 | c.-14 others(11): Show |
TUBA3E | ENSG00000152086.9 | transcript | ENST00000312988.9 | protein_coding | 1/5 | chr2 | TogoVar | ||||||
TUBA4B_chr2_219248243_219277197 | 219271292 | G | T | stop_gained | HIGH | NA18985.hp1 | a0008 | a0008c0013 | a0008c0013t0004 | a0008c0013t0004g0078 | 1 | 350 | 0.0029 | 0 | c.319 others(3): Show |
p.Gly others(4): Show |
TUBA4B | ENSG00000243910.9 | transcript | ENST00000490341.3 | protein_coding | 4/4 | 484/1389 | 319/726 | 107/241 | chr2 | TogoVar | ||
TYW1B_chr7_72569513_72833200 | 72728896 | C | T | stop_gained | HIGH | HG00280.hp1 HG00323.hp1 HG00558.hp2 others(118): Show |
a0001a0004a0005others(3): Show | a0001c0001a0001c0007a0001c0018others(11): Show | a0001c0001t0001a0001c0007t0001a0001c0018t0001others(11): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(118): Show | 121 | 286 | 0.4231 | 0 | c.111 others(4): Show |
p.Trp others(4): Show |
TYW1B | ENSG00000277149.5 | transcript | ENST00000620995.5 | protein_coding | 9/14 | 1243/3117 | 1118/2007 | 373/668 | chr7 | TogoVar | ||
TYW1B_chr7_72569513_72833200 | 72744551 | C | CA | frameshift_variant | HIGH | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(209): Show |
a0001a0004a0005others(5): Show | a0001c0001a0001c0002a0001c0006others(18): Show | a0001c0001t0001a0001c0002t0001a0001c0006t0001others(19): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(209): Show | 212 | 286 | 0.7413 | 1 | c.101 others(5): Show |
p.Glu others(5): Show |
TYW1B | ENSG00000277149.5 | transcript | ENST00000620995.5 | protein_coding | 8/14 | 1139/3117 | 1014/2007 | 338/668 | chr7 | TogoVar | ||
UBA1_chrX_47188829_47220128 | 47199506 | T | TA | frameshift_variant | HIGH | NA18985.hp1 | a0007 | a0007c0009 | a0007c0009t0001 | a0007c0009t0001g0083 | 1 | 281 | 0.0036 | 1 | c.377 others(4): Show |
p.Asn others(5): Show |
UBA1 | ENSG00000130985.17 | transcript | ENST00000335972.11 | protein_coding | 5/26 | 574/3572 | 378/3177 | 126/1058 | INFO_REALIGN_3_PRIME | chrX | TogoVar |