regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PRSS48_chr4_151272161_151296862 | 151279866 | G | GCAGGT | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(87): Show |
a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0002a0002c0004t0001g0012a0002c0004t0001g0013others(21): Show | 90 | 428 | 0.2103 | 5 | c.127 others(12): Show |
p.Ser others(4): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 2/5 | 144/1408 | 132/987 | 44/328 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PTEN_chr10_87858625_87976930 | 87960876 | C | CT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(84): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(27): Show | a0001c0001t0002g0009a0001c0001t0002g0144a0001c0001t0002g0211others(84): Show | 87 | 322 | 0.2702 | 1 | c.802 others(6): Show |
PTEN | ENSG00000171862.15 | transcript | ENST00000371953.8 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
PTTG1IP2_chr7_90464639_90518397 | 90487326 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00423.hp2 HG00438.hp2 others(69): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0235others(58): Show | 72 | 384 | 0.1875 | 0 | c.193 others(5): Show |
PTTG1IP2 | ENSG00000251154.2 | transcript | ENST00000509356.2 | protein_coding | 2/6 | chr7 | TogoVar | ||||||
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
RAB40AL_chrX_102932272_102943300 | 102937497 | G | GC | frameshift_variant | HIGH | NA19006.hp1 | a0004 | a0004c0014 | a0004c0014t0004 | a0004c0014t0004g0000 | 1 | 316 | 0.0032 | 1 | c.181 others(4): Show |
p.Gln others(4): Show |
RAB40AL | ENSG00000102128.8 | transcript | ENST00000218249.7 | protein_coding | 1/1 | 229/1029 | 182/837 | 61/278 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RAB40AL_chrX_102932272_102943300 | 102937767 | T | TG | frameshift_variant | HIGH | NA19006.hp1 | a0004 | a0004c0014 | a0004c0014t0004 | a0004c0014t0004g0000 | 1 | 316 | 0.0032 | 1 | c.450 others(4): Show |
p.Thr others(5): Show |
RAB40AL | ENSG00000102128.8 | transcript | ENST00000218249.7 | protein_coding | 1/1 | 498/1029 | 451/837 | 151/278 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
RAD17_chr5_69364818_69419801 | 69371436 | T | TC | splice_acceptor_variant others(1): Show |
HIGH | HG00609.hp1 HG00642.hp1 HG01243.hp1 others(25): Show |
a0001a0010 | a0001c0001a0010c0011 | a0001c0001t0002a0010c0011t0002 | a0001c0001t0002g0326a0001c0001t0002g0327a0001c0001t0002g0328others(25): Show | 28 | 359 | 0.0780 | 1 | c.-27 others(7): Show |
RAD17 | ENSG00000152942.19 | transcript | ENST00000354868.10 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
RNF17_chr13_24759169_24884921 | 24850445 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00673.hp2 HG01943.hp1 HG01993.hp2 others(32): Show |
a0005 | a0005c0005 | a0005c0005t0001 | a0005c0005t0001g0001a0005c0005t0001g0026a0005c0005t0001g0095others(31): Show | 35 | 426 | 0.0822 | 0 | c.320 others(6): Show |
RNF17 | ENSG00000132972.19 | transcript | ENST00000255324.10 | protein_coding | 23/35 | chr13 | TogoVar | ||||||
RPGR_chrX_38279408_38332509 | 38286202 | C | CCCCTTCT others(12): Show |
frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | 19 | c.279 others(28): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2938/4733 | 2796/3459 | 932/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286219 | TC | T | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | -1 | c.277 others(5): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2921/4733 | 2779/3459 | 927/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286241 | TC | T | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | -1 | c.275 others(5): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2899/4733 | 2757/3459 | 919/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286255 | TC | T | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | -1 | c.274 others(5): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2885/4733 | 2743/3459 | 915/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286263 | TCC | T | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | -2 | c.273 others(11): Show |
p.Gly others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2877/4733 | 2734/3459 | 912/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286310 | C | CT | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | 1 | c.268 others(5): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2830/4733 | 2688/3459 | 896/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286363 | TC | T | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | -1 | c.263 others(5): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2777/4733 | 2635/3459 | 879/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286441 | TC | T | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | -1 | c.255 others(5): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2699/4733 | 2557/3459 | 853/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286463 | C | CT | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | 1 | c.253 others(10): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2677/4733 | 2535/3459 | 845/1152 | chrX | TogoVar | ||
RPGR_chrX_38279408_38332509 | 38286490 | CTT | C | frameshift_variant | HIGH | NA19006.hp1 | a0030 | a0030c0030 | a0030c0030t0002 | a0030c0030t0002g0115 | 1 | 302 | 0.0033 | -2 | c.250 others(11): Show |
p.Glu others(5): Show |
RPGR | ENSG00000156313.15 | transcript | ENST00000645032.1 | protein_coding | 15/15 | 2650/4733 | 2507/3459 | 836/1152 | chrX | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00544.hp1 HG00558.hp2 others(101): Show |
a0001a0006a0007 | a0001c0001a0001c0004a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0010others(101): Show | 104 | 386 | 0.2694 | 3 | c.100 others(16): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SCART1_chr10_133448945_133474760 | 133457333 | TC | T | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp2 HG00609.hp2 others(90): Show |
a0003a0004 | a0003c0003a0003c0007a0003c0008others(16): Show | a0003c0003t0003a0003c0007t0003a0003c0008t0003others(20): Show | a0003c0003t0003g0005a0003c0003t0003g0007a0003c0003t0003g0023others(62): Show | 93 | 434 | 0.2143 | -1 | c.444 others(4): Show |
p.Glu others(5): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 3/12 | 497/4929 | 444/3084 | 148/1027 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
SCART1_chr10_133448945_133474760 | 133464740 | CTGGGGTG | C | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00544.hp2 others(99): Show |
a0003a0004a0009others(8): Show | a0003c0003a0003c0007a0003c0008others(24): Show | a0003c0003t0003a0003c0007t0003a0003c0008t0003others(28): Show | a0003c0003t0003g0005a0003c0003t0003g0007a0003c0003t0003g0023others(69): Show | 102 | 434 | 0.2350 | -7 | c.211 others(16): Show |
p.Val others(5): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 7/12 | 2170/4929 | 2117/3084 | 706/1027 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
SCRN3_chr2_174390730_174434575 | 174427852 | TTCAAATT others(6): Show |
T | frameshift_variant | HIGH | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(85): Show |
a0000 | a0000c0002a0000c0004a0000c0008 | a0000c0002t0002a0000c0002t0004a0000c0002t0012others(2): Show | a0000c0002t0002g0002a0000c0002t0002g0009a0000c0002t0002g0010others(47): Show | 88 | 364 | 0.2418 | -13 | c.125 others(22): Show |
p.Asn others(5): Show |
SCRN3 | ENSG00000144306.15 | transcript | ENST00000272732.11 | protein_coding | 8/8 | 1348/3052 | 1251/1275 | 417/424 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SERPINB7_chr18_63770418_63810370 | 63804288 | C | T | stop_gained | HIGH | NA19002.hp2 NA19006.hp1 NA19058.hp2 |
a0004 | a0004c0006 | a0004c0006t0001 | a0004c0006t0001g0243a0004c0006t0001g0319a0004c0006t0001g0326 | 3 | 432 | 0.0069 | 0 | c.796 others(3): Show |
p.Arg others(4): Show |
SERPINB7 | ENSG00000166396.13 | transcript | ENST00000398019.7 | protein_coding | 8/8 | 1113/2195 | 796/1143 | 266/380 | chr18 | TogoVar | ||
SGSH_chr17_80204276_80225333 | 80217137 | C | CG | frameshift_variant | HIGH | HG00438.hp1 HG01993.hp1 HG03927.hp1 others(4): Show |
a0004 | a0004c0006a0004c0008 | a0004c0006t0001a0004c0008t0002 | a0004c0006t0001g0035a0004c0006t0001g0068a0004c0006t0001g0103others(3): Show | 7 | 420 | 0.0167 | 1 | c.143 others(4): Show |
p.His others(4): Show |
SGSH | ENSG00000181523.13 | transcript | ENST00000326317.11 | protein_coding | 2/8 | 163/2705 | 143/1509 | 48/502 | chr17 | TogoVar | ||
SHROOM4_chrX_50581796_50819194 | 50813997 | A | AG | frameshift_variant | HIGH | NA19006.hp1 | a0021 | a0021c0011 | a0021c0011t0001 | a0021c0011t0001g0001 | 1 | 175 | 0.0057 | 1 | c.21d others(3): Show |
p.Phe others(3): Show |
SHROOM4 | ENSG00000158352.18 | transcript | ENST00000376020.9 | protein_coding | 1/9 | 197/14557 | 21/4482 | 7/1493 | chrX | TogoVar | ||
SLC35G6_chr17_7476446_7488496 | 7482961 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(314): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0009a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0005g0001others(13): Show | 317 | 412 | 0.7694 | 0 | c.977 others(3): Show |
p.Trp others(4): Show |
SLC35G6 | ENSG00000259224.3 | transcript | ENST00000412468.4 | protein_coding | 2/2 | 1048/1583 | 977/1017 | 326/338 | chr17 | TogoVar | ||
SLFNL1_chr1_41010597_41026725 | 41017902 | A | AC | frameshift_variant | HIGH | HG00544.hp2 HG00673.hp1 HG00673.hp2 others(57): Show |
a0002a0005a0007others(3): Show | a0002c0002a0002c0022a0005c0007others(6): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(11): Show | a0002c0002t0001g0007a0002c0002t0001g0022a0002c0002t0001g0029others(24): Show | 60 | 430 | 0.1395 | 1 | c.689 others(4): Show |
p.Ser others(5): Show |
SLFNL1 | ENSG00000171790.16 | transcript | ENST00000302946.13 | protein_coding | 4/6 | 917/1961 | 689/1224 | 230/407 | chr1 | TogoVar | ||
SON_chr21_33538038_33582481 | 33576378 | G | GA | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | 1 | c.723 others(5): Show |
p.Ala others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7292/8393 | 7237/7281 | 2413/2426 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |
SON_chr21_33538038_33582481 | 33576390 | GA | G | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | -1 | c.724 others(5): Show |
p.Arg others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7303/8393 | 7248/7281 | 2416/2426 | chr21 | TogoVar | ||
SOX3_chrX_140497985_140510069 | 140504760 | C | CG | frameshift_variant | HIGH | NA19006.hp1 | a0008 | a0008c0007 | a0008c0007t0008 | a0008c0007t0008g0000 | 1 | 339 | 0.0030 | 1 | c.300 others(4): Show |
p.Ala others(5): Show |
SOX3 | ENSG00000134595.9 | transcript | ENST00000370536.5 | protein_coding | 1/1 | 309/2085 | 300/1341 | 100/446 | chrX | TogoVar | ||
SPSB2_chr12_6865935_6878303 | 6872998 | C | T | splice_acceptor_variant others(1): Show |
HIGH | HG00423.hp1 HG00544.hp2 HG00609.hp2 others(74): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0006a0001c0001t0001g0007a0001c0001t0001g0016others(7): Show | 77 | 398 | 0.1935 | 0 | c.-96 others(5): Show |
SPSB2 | ENSG00000111671.10 | transcript | ENST00000524270.6 | protein_coding | 1/2 | chr12 | TogoVar | ||||||
SSX3_chrX_48341427_48361703 | 48354005 | TC | T | frameshift_variant | HIGH | NA19006.hp1 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0058 | 1 | 331 | 0.0030 | -1 | c.273 others(4): Show |
p.Asn others(4): Show |
SSX3 | ENSG00000165584.16 | transcript | ENST00000298396.7 | protein_coding | 4/8 | 363/1270 | 273/567 | 91/188 | chrX | TogoVar | ||
STK11IP_chr2_219592857_219621451 | 219608362 | T | TGGTGGAA others(18): Show |
frameshift_variant | HIGH | NA19006.hp2 | a0020 | a0020c0026 | a0020c0026t0001 | a0020c0026t0001g0123 | 1 | 342 | 0.0029 | 25 | c.153 others(34): Show |
p.Glu others(5): Show |
STK11IP | ENSG00000144589.22 | transcript | ENST00000456909.6 | protein_coding | 14/25 | 1656/3618 | 1563/3267 | 521/1088 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SYTL1_chr1_27337022_27358932 | 27353799 | G | T | stop_gained | HIGH | NA19006.hp1 | a0006 | a0006c0015 | a0006c0015t0001 | a0006c0015t0001g0070 | 1 | 378 | 0.0027 | 0 | c.163 others(4): Show |
p.Glu others(4): Show |
SYTL1 | ENSG00000142765.18 | transcript | ENST00000616558.5 | protein_coding | 15/15 | 1803/1936 | 1636/1689 | 546/562 | chr1 | TogoVar | ||
TAP2_chr6_32820415_32843739 | 32828908 | A | G | stop_lost | HIGH | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(156): Show |
a0000 | a0000c0002a0000c0006a0000c0008others(19): Show | a0000c0002t0001a0000c0002t0003a0000c0002t0025others(28): Show | a0000c0002t0001g0001a0000c0002t0001g0037a0000c0002t0001g0040others(70): Show | 159 | 485 | 0.3278 | 0 | c.205 others(4): Show |
p.Ter others(11): Show |
TAP2 | ENSG00000204267.19 | transcript | ENST00000374897.4 | protein_coding | 12/12 | 2150/5643 | 2059/2061 | 687/686 | chr6 | TogoVar | ||
TCHHL1_chr1_152079141_152094064 | 152085716 | G | A | stop_gained | HIGH | HG00642.hp2 HG01167.hp1 HG01169.hp1 others(26): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0002 | 29 | 376 | 0.0771 | 0 | c.196 others(4): Show |
p.Gln others(4): Show |
TCHHL1 | ENSG00000182898.4 | transcript | ENST00000368806.2 | protein_coding | 3/3 | 2031/3606 | 1966/2715 | 656/904 | chr1 | TogoVar | ||
TLR7_chrX_12862072_12895361 | 12885828 | C | CA | frameshift_variant | HIGH | NA19006.hp1 | a0004 | a0004c0005 | a0004c0005t0001 | a0004c0005t0001g0009 | 1 | 321 | 0.0031 | 1 | c.326 others(4): Show |
p.Asn others(5): Show |
TLR7 | ENSG00000196664.5 | transcript | ENST00000380659.4 | protein_coding | 3/3 | 477/5003 | 327/3150 | 109/1049 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TLR7_chrX_12862072_12895361 | 12887011 | T | TA | frameshift_variant | HIGH | NA19006.hp1 | a0004 | a0004c0005 | a0004c0005t0001 | a0004c0005t0001g0009 | 1 | 321 | 0.0031 | 1 | c.150 others(5): Show |
p.Asn others(5): Show |
TLR7 | ENSG00000196664.5 | transcript | ENST00000380659.4 | protein_coding | 3/3 | 1659/5003 | 1509/3150 | 503/1049 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
TLR8_chrX_12901620_12928169 | 12906707 | A | G | start_lost others(1): Show |
HIGH | HG00099.hp2 HG00423.hp1 HG00438.hp1 others(162): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0004a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0008a0001c0004t0001others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0011others(44): Show | 165 | 303 | 0.5446 | 0 | c.1A> others(1): Show |
p.Met others(2): Show |
TLR8 | ENSG00000101916.12 | transcript | ENST00000218032.7 | protein_coding | 1/2 | 88/4216 | 1/3126 | 1/1041 | chrX | TogoVar | ||
TMPRSS3_chr21_42366890_42401052 | 42383199 | C | CTA | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(99): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0003a0002c0007others(6): Show | a0001c0001t0001a0002c0003t0001a0002c0003t0002others(16): Show | a0001c0001t0001g0251a0002c0003t0001g0007a0002c0003t0001g0011others(80): Show | 102 | 472 | 0.2161 | 2 | c.617 others(13): Show |
TMPRSS3 | ENSG00000160183.17 | transcript | ENST00000644384.2 | protein_coding | 7/12 | chr21 | TogoVar | ||||||
TREX2_chrX_153439473_153451056 | 153445305 | G | GT | frameshift_variant | HIGH | NA19006.hp1 | a0003 | a0003c0007 | a0003c0007t0003 | a0003c0007t0003g0015 | 1 | 337 | 0.0030 | 1 | c.125 others(4): Show |
p.Asn others(4): Show |
TREX2 | ENSG00000183479.13 | transcript | ENST00000370231.3 | protein_coding | 2/2 | 238/1071 | 125/711 | 42/236 | chrX | TogoVar | ||
USP17L20_chr4_9253124_9264716 | 9258279 | T | A | stop_gained | HIGH | HG01261.hp2 HG01346.hp2 HG02132.hp2 others(7): Show |
a0006 | a0006c0012a0006c0020a0006c0051others(4): Show | a0006c0012t0000a0006c0020t0000a0006c0051t0000others(4): Show | a0006c0012t0000g0000a0006c0020t0000g0000a0006c0051t0000g0000others(4): Show | 10 | 234 | 0.0427 | 0 | c.156 others(3): Show |
p.Cys others(3): Show |
USP17L20 | ENSG00000250745.3 | transcript | ENST00000506151.1 | protein_coding | 1/1 | 156/1593 | 156/1593 | 52/530 | chr4 | TogoVar | ||
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
ZNF117_chr7_64966772_64996036 | 64978289 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(376): Show |
a0001a0002a0007others(4): Show | a0001c0001a0001c0007a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(54): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0008others(233): Show | 379 | 444 | 0.8536 | 0 | c.128 others(4): Show |
p.Arg others(4): Show |
ZNF117 | ENSG00000152926.16 | transcript | ENST00000282869.11 | protein_coding | 4/4 | 2567/9084 | 1282/1452 | 428/483 | chr7 | TogoVar | ||
ZNF233_chr19_44254886_44280317 | 44274642 | CG | C | frameshift_variant | HIGH | HG00323.hp1 HG00544.hp1 HG00597.hp1 others(137): Show |
a0000 | a0000c0003a0000c0004a0000c0005others(2): Show | a0000c0003t0001a0000c0004t0001a0000c0005t0001others(2): Show | a0000c0003t0001g0002a0000c0003t0001g0005a0000c0003t0001g0008others(90): Show | 140 | 408 | 0.3431 | -1 | c.198 others(5): Show |
p.Leu others(5): Show |
ZNF233 | ENSG00000159915.13 | transcript | ENST00000683810.1 | protein_coding | 5/5 | 2083/2757 | 1983/2013 | 661/670 | chr19 | TogoVar | ||
ZNF280C_chrX_130197707_130273899 | 130236568 | G | GT | frameshift_variant | HIGH | NA19006.hp1 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0108 | 1 | 271 | 0.0037 | 1 | c.564 others(4): Show |
p.Pro others(5): Show |
ZNF280C | ENSG00000056277.16 | transcript | ENST00000370978.9 | protein_coding | 7/19 | 718/4638 | 564/2214 | 188/737 | chrX | TogoVar | ||
ZNF419_chr19_57482750_57501098 | 57492212 | G | A | splice_donor_variant others(1): Show |
HIGH | HG00140.hp1 HG00323.hp2 HG00408.hp1 others(136): Show |
a0002a0005 | a0002c0002a0002c0004a0002c0006others(4): Show | a0002c0002t0004a0002c0002t0005a0002c0002t0006others(32): Show | a0002c0002t0004g0003a0002c0002t0004g0028a0002c0002t0004g0029others(68): Show | 139 | 418 | 0.3325 | 0 | c.298 others(5): Show |
ZNF419 | ENSG00000105136.22 | transcript | ENST00000221735.12 | protein_coding | 4/4 | chr19 | TogoVar | ||||||
ZNF449_chrX_135339796_135368413 | 135359980 | G | GA | frameshift_variant | HIGH | NA19006.hp1 | a0002 | a0002c0004 | a0002c0004t0007 | a0002c0004t0007g0068 | 1 | 294 | 0.0034 | 1 | c.651 others(4): Show |
p.Gln others(5): Show |
ZNF449 | ENSG00000173275.13 | transcript | ENST00000339249.5 | protein_coding | 4/5 | 792/4034 | 652/1557 | 218/518 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
ZNF449_chrX_135339796_135368413 | 135360277 | A | AG | frameshift_variant | HIGH | NA19006.hp1 | a0002 | a0002c0004 | a0002c0004t0007 | a0002c0004t0007g0068 | 1 | 294 | 0.0034 | 1 | c.762 others(4): Show |
p.Asn others(5): Show |
ZNF449 | ENSG00000173275.13 | transcript | ENST00000339249.5 | protein_coding | 5/5 | 903/4034 | 763/1557 | 255/518 | INFO_REALIGN_3_PRIME | chrX | TogoVar |