Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	chr	external
A1CF_chr10_50794409_50890627	50826869	C C	T T	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0078 a0001c0002t0004g0078	1	338	0.0030	0	c.769 others(8): Show c.769+1262G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50826910	T T	C C	intron_variant intron_variant	MODIFIER	HG03704.hp2 HG03704.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0264 a0001c0001t0005g0264	1	338	0.0030	0	c.769 others(8): Show c.769+1221A>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827088	C C	A A	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0185 a0001c0001t0002g0185	1	338	0.0030	0	c.769 others(8): Show c.769+1043G>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827313	A A	G G	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0034 a0001c0012t0034	a0001c0012t0034g0154 a0001c0012t0034g0154	1	338	0.0030	0	c.769 others(7): Show c.769+818T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827410	G G	T T	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0105 a0001c0002t0004g0105	1	338	0.0030	0	c.769 others(7): Show c.769+721C>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827485	C C	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01884.hp2 HG01891.hp2 others(21): Show HG01069.hp2 HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02630.hp1 HG02897.hp2 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03516.hp2 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19043.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0007 others(3): Show a0001c0001 a0001c0002 a0001c0007 a0001c0008 a0002c0004 a0002c0006	a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 others(11): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0028 a0001c0001t0037 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004 a0001c0007t0005 a0001c0007t0033 a0001c0008t0001 a0002c0004t0044 a0002c0004t0045 a0002c0006t0006	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 others(18): Show a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0028g0052 a0001c0001t0037g0050 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160 a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0008t0001g0039 a0002c0004t0044g0049 a0002c0004t0045g0200 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	24	338	0.0710	0	c.769 others(7): Show c.769+646G>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827506	A A	T T	intron_variant intron_variant	MODIFIER	HG02074.hp2 NA19081.hp1 HG02074.hp2 NA19081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0059 a0001c0001t0003g0061 a0001c0001t0003g0059 a0001c0001t0003g0061	2	338	0.0059	0	c.769 others(7): Show c.769+625T>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827812	G G	T T	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0034 a0001c0012t0034	a0001c0012t0034g0154 a0001c0012t0034g0154	1	338	0.0030	0	c.769 others(7): Show c.769+319C>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827870	A A	G G	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0186 a0001c0001t0002g0186	1	338	0.0030	0	c.769 others(7): Show c.769+261T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827932	A A	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01884.hp2 HG01891.hp2 others(10): Show HG01069.hp2 HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02630.hp1 HG03139.hp2 HG03540.hp1 NA19043.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0009 a0001c0001t0015 a0001c0001t0028 others(5): Show a0001c0001t0009 a0001c0001t0015 a0001c0001t0028 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004 a0002c0004t0044 a0002c0004t0045	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(9): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0028g0052 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160 a0002c0004t0044g0049 a0002c0004t0045g0200	13	338	0.0385	0	c.769 others(7): Show c.769+199T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827955	T T	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02723.hp2 HG01243.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0241 a0001c0001t0019g0242 a0001c0001t0019g0241 a0001c0001t0019g0242	2	338	0.0059	0	c.769 others(7): Show c.769+176A>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50827989	G G	A A	intron_variant intron_variant	MODIFIER	HG00621.hp1 NA19011.hp1 NA19060.hp2 others(1): Show HG00621.hp1 NA19011.hp1 NA19060.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0020 a0001c0002t0004 a0001c0001t0020 a0001c0002t0004	a0001c0001t0020g0112 a0001c0002t0004g0019 a0001c0002t0004g0105 a0001c0001t0020g0112 a0001c0002t0004g0019 a0001c0002t0004g0105	4	338	0.0118	0	c.769 others(7): Show c.769+142C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50828002	A A	G G	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0175 a0001c0001t0002g0175	1	338	0.0030	0	c.769 others(7): Show c.769+129T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	7/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50828803	G G	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG03516.hp2 HG02258.hp2 HG03516.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0005 a0001c0007t0033 a0001c0007t0005 a0001c0007t0033	a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0007t0005g0244 a0001c0007t0033g0245	2	338	0.0059	0	c.605 others(7): Show c.605-508C>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50828813	A A	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03139.hp1 HG06807.hp2 others(1): Show HG02258.hp1 HG03139.hp1 HG06807.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0008g0006 a0001c0001t0008g0098	4	338	0.0118	0	c.605 others(7): Show c.605-518T>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50828907	A A	G G	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	0	c.605 others(7): Show c.605-612T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50828945	A A	C C	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0206 a0001c0001t0005g0206	1	338	0.0030	0	c.605 others(7): Show c.605-650T>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829091	A A	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02055.hp1 others(5): Show HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0001t0015 a0001c0001t0043 others(1): Show a0001c0001t0009 a0001c0001t0015 a0001c0001t0043 a0001c0002t0004	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(4): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0043g0094 a0001c0002t0004g0160	8	338	0.0237	0	c.605 others(7): Show c.605-796T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829247	G G	T T	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG03139.hp2 HG01981.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0041 a0001c0002t0004 a0001c0001t0041 a0001c0002t0004	a0001c0001t0041g0037 a0001c0002t0004g0036 a0001c0001t0041g0037 a0001c0002t0004g0036	2	338	0.0059	0	c.605 others(7): Show c.605-952C>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829268	T T	A A	intron_variant intron_variant	MODIFIER	HG01981.hp2 HG03139.hp2 HG01981.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0041 a0001c0002t0004 a0001c0001t0041 a0001c0002t0004	a0001c0001t0041g0037 a0001c0002t0004g0036 a0001c0001t0041g0037 a0001c0002t0004g0036	2	338	0.0059	0	c.605 others(7): Show c.605-973A>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829345	G G	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	0	c.605 others(8): Show c.605-1050C>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829399	G G	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02615.hp1 NA20129.hp1 HG01069.hp2 HG02615.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0028 a0002c0004t0044 a0002c0004t0045 a0001c0001t0028 a0002c0004t0044 a0002c0004t0045	a0001c0001t0028g0052 a0002c0004t0044g0049 a0002c0004t0045g0200 a0001c0001t0028g0052 a0002c0004t0044g0049 a0002c0004t0045g0200	3	338	0.0089	0	c.605 others(8): Show c.605-1104C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829666	C C	G G	intron_variant intron_variant	MODIFIER	NA18980.hp1 NA18980.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0179 a0001c0001t0002g0179	1	338	0.0030	0	c.605 others(8): Show c.605-1371G>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829836	G G	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01884.hp2 HG01891.hp2 others(21): Show HG01069.hp2 HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02630.hp1 HG02897.hp2 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03516.hp2 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19043.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0007 others(3): Show a0001c0001 a0001c0002 a0001c0007 a0001c0008 a0002c0004 a0002c0006	a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 others(11): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0028 a0001c0001t0037 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004 a0001c0007t0005 a0001c0007t0033 a0001c0008t0001 a0002c0004t0044 a0002c0004t0045 a0002c0006t0006	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 others(18): Show a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0028g0052 a0001c0001t0037g0050 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160 a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0008t0001g0039 a0002c0004t0044g0049 a0002c0004t0045g0200 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	24	338	0.0710	0	c.605 others(8): Show c.605-1541C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50829944	C C	G G	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0038	a0001c0001t0038g0168 a0001c0001t0038g0168	1	338	0.0030	0	c.605 others(8): Show c.605-1649G>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830224	G G	T T	intron_variant intron_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0278 a0001c0001t0005g0278	1	338	0.0030	0	c.605 others(8): Show c.605-1929C>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830370	G G	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02055.hp1 HG02572.hp1 others(2): Show HG01884.hp2 HG02055.hp1 HG02572.hp1 HG02630.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0002t0004 a0001c0001t0009 a0001c0002t0004	a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 others(1): Show a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0002t0004g0160	5	338	0.0148	0	c.605 others(8): Show c.605-2075C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830485	A A	T T	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	0	c.605 others(8): Show c.605-2190T>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830563	AAAATGAA others(6): Show AAAATGAAAGATCT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02922.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG02922.hp2 HG03139.hp1 HG06807.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0037 a0001c0001t0008 a0001c0001t0037	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0037g0050 a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0037g0050	5	338	0.0148	-13	c.605 others(30): Show c.605-2281_605-2269delAGATCTTTCATTT	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830685	C C	T T	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0052 a0001c0001t0028g0052	1	338	0.0030	0	c.605 others(8): Show c.605-2390G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830702	T T	C C	intron_variant intron_variant	MODIFIER	HG02083.hp2 NA18969.hp1 NA18983.hp2 HG02083.hp2 NA18969.hp1 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065	3	338	0.0089	0	c.605 others(8): Show c.605-2407A>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830806	G G	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG00735.hp1 others(23): Show HG00140.hp1 HG00423.hp1 HG00735.hp1 HG01257.hp2 HG01258.hp2 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01934.hp1 HG01975.hp2 HG01981.hp1 HG02074.hp2 HG02300.hp1 HG03195.hp2 HG03831.hp1 HG03927.hp2 HG04115.hp1 HG04204.hp1 NA18945.hp2 NA18962.hp2 NA18970.hp1 NA18981.hp2 NA19080.hp2 NA19081.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0026 a0001c0001t0029 a0001c0001t0031 a0001c0001t0032	a0001c0001t0001g0011 a0001c0001t0002g0056 a0001c0001t0003g0012 others(16): Show a0001c0001t0001g0011 a0001c0001t0002g0056 a0001c0001t0003g0012 a0001c0001t0003g0013 a0001c0001t0003g0014 a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0055 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0068 a0001c0001t0007g0066 a0001c0001t0026g0054 a0001c0001t0029g0057 a0001c0001t0031g0053 a0001c0001t0032g0058	26	338	0.0769	0	c.605 others(8): Show c.605-2511C>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830876	A A	C C	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02155.hp1 HG02080.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0162 a0001c0001t0002g0194 a0001c0001t0002g0162 a0001c0001t0002g0194	2	338	0.0059	0	c.605 others(8): Show c.605-2581T>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50830905	A A	AAAACAGA others(5): Show AAAACAGACATTT	intron_variant intron_variant	MODIFIER	HG00621.hp1 NA19011.hp1 NA19060.hp2 HG00621.hp1 NA19011.hp1 NA19060.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0019 a0001c0002t0004g0105 a0001c0002t0004g0019 a0001c0002t0004g0105	3	338	0.0089	12	c.605 others(29): Show c.605-2622_605-2611dupAAATGTCTGTTT	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831007	A A	T T	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG03540.hp2 HG02886.hp2 HG03540.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0018 a0002c0004t0018	a0002c0004t0018g0034 a0002c0004t0018g0153 a0002c0004t0018g0034 a0002c0004t0018g0153	2	338	0.0059	0	c.605 others(8): Show c.605-2712T>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831174	G G	A A	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18962.hp1 NA18986.hp1 NA18947.hp2 NA18962.hp1 NA18986.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0024 a0001c0001t0001g0099 a0001c0001t0001g0024 a0001c0001t0001g0099	3	338	0.0089	0	c.605 others(8): Show c.605-2879C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831262	A A	G G	intron_variant intron_variant	MODIFIER	NA19012.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0178 a0001c0001t0002g0178	1	338	0.0030	0	c.605 others(8): Show c.605-2967T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831283	C C	T T	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02922.hp2 HG00673.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0037 a0001c0001t0001 a0001c0001t0037	a0001c0001t0001g0135 a0001c0001t0037g0050 a0001c0001t0001g0135 a0001c0001t0037g0050	2	338	0.0059	0	c.605 others(8): Show c.605-2988G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831305	A A	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01516.hp2 HG02523.hp1 others(12): Show HG00438.hp1 HG01516.hp2 HG02523.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG04199.hp1 NA18948.hp1 NA18969.hp2 NA18974.hp1 NA18994.hp1 NA19002.hp1 NA19009.hp1 NA19066.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0022	a0001c0001t0001g0276 a0001c0001t0003g0033 a0001c0001t0003g0259 others(11): Show a0001c0001t0001g0276 a0001c0001t0003g0033 a0001c0001t0003g0259 a0001c0001t0003g0260 a0001c0001t0003g0261 a0001c0001t0003g0283 a0001c0001t0003g0284 a0001c0001t0003g0285 a0001c0001t0003g0286 a0001c0001t0003g0287 a0001c0001t0005g0262 a0001c0001t0005g0273 a0001c0001t0005g0275 a0001c0001t0022g0274	15	338	0.0444	0	c.605 others(8): Show c.605-3010T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831451	G G	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02897.hp2 NA18906.hp2 others(1): Show HG02451.hp2 HG02897.hp2 NA18906.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0001 a0002c0006t0006 a0001c0008t0001 a0002c0006t0006	a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 others(1): Show a0001c0008t0001g0039 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	4	338	0.0118	0	c.605 others(8): Show c.605-3156C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831467	A A	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG01981.hp2 others(19): Show HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG02897.hp2 HG02922.hp2 HG03139.hp1 HG03139.hp2 HG03516.hp2 HG03540.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA19043.hp1 NA19240.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0007 others(2): Show a0001c0001 a0001c0002 a0001c0007 a0001c0008 a0002c0006	a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 others(9): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0037 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004 a0001c0007t0005 a0001c0007t0033 a0001c0008t0001 a0001c0008t0017 a0002c0006t0006	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 others(16): Show a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0037g0050 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160 a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0008t0001g0039 a0001c0008t0017g0042 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	22	338	0.0651	0	c.605 others(8): Show c.605-3172T>C	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831539	A A	T T	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0177 a0001c0001t0002g0177	1	338	0.0030	0	c.605 others(8): Show c.605-3244T>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831588	C C	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02922.hp2 HG03139.hp1 others(2): Show HG02258.hp1 HG02922.hp2 HG03139.hp1 HG06807.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0037 a0001c0001t0008 a0001c0001t0037	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0037g0050 a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0037g0050	5	338	0.0148	0	c.605 others(8): Show c.605-3293G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831589	G G	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0066 a0001c0001t0007g0066	1	338	0.0030	0	c.605 others(8): Show c.605-3294C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831723	C C	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02723.hp2 HG01243.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0241 a0001c0001t0019g0242 a0001c0001t0019g0241 a0001c0001t0019g0242	2	338	0.0059	0	c.605 others(8): Show c.605-3428G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831726	C C	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0053 a0001c0001t0031g0053	1	338	0.0030	0	c.605 others(8): Show c.605-3431G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831795	C C	T T	intron_variant intron_variant	MODIFIER	NA19003.hp2 NA19003.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0239 a0001c0001t0001g0239	1	338	0.0030	0	c.605 others(8): Show c.605-3500G>A	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831852	C C	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0052 a0001c0001t0028g0052	1	338	0.0030	0	c.605 others(8): Show c.605-3557G>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831887	G G	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00639.hp1 HG00735.hp2 others(50): Show HG00438.hp1 HG00639.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp1 HG01071.hp2 HG01081.hp2 HG01123.hp2 HG01192.hp1 HG01243.hp2 HG01516.hp2 HG01884.hp1 HG01891.hp1 HG02055.hp2 HG02257.hp1 HG02280.hp1 HG02523.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp2 HG02735.hp2 HG02895.hp2 HG03041.hp1 HG03098.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp2 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp2 NA18522.hp2 NA18948.hp1 NA18969.hp2 NA18974.hp1 NA18994.hp1 NA19002.hp1 NA19009.hp1 NA19009.hp2 NA19066.hp2 NA19082.hp2 NA19240.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0014 a0001c0001t0017 a0001c0001t0022 a0001c0001t0038 a0001c0002t0004 a0002c0004t0006	a0001c0001t0001g0276 a0001c0001t0003g0018 a0001c0001t0003g0033 others(41): Show a0001c0001t0001g0276 a0001c0001t0003g0018 a0001c0001t0003g0033 a0001c0001t0003g0259 a0001c0001t0003g0260 a0001c0001t0003g0261 a0001c0001t0003g0263 a0001c0001t0003g0270 a0001c0001t0003g0283 a0001c0001t0003g0284 a0001c0001t0003g0285 a0001c0001t0003g0286 a0001c0001t0003g0287 a0001c0001t0005g0005 a0001c0001t0005g0010 a0001c0001t0005g0043 a0001c0001t0005g0143 a0001c0001t0005g0144 a0001c0001t0005g0201 a0001c0001t0005g0202 a0001c0001t0005g0206 a0001c0001t0005g0240 a0001c0001t0005g0243 a0001c0001t0005g0262 a0001c0001t0005g0264 a0001c0001t0005g0265 a0001c0001t0005g0268 a0001c0001t0005g0271 a0001c0001t0005g0272 a0001c0001t0005g0273 a0001c0001t0005g0275 a0001c0001t0005g0277 a0001c0001t0005g0278 a0001c0001t0005g0280 a0001c0001t0005g0281 a0001c0001t0010g0031 a0001c0001t0010g0097 a0001c0001t0014g0279 a0001c0001t0017g0266 a0001c0001t0022g0274 a0001c0001t0038g0168 a0001c0002t0004g0267 a0002c0004t0006g0032 a0002c0004t0006g0269	53	338	0.1568	0	c.605 others(8): Show c.605-3592C>T	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar
A1CF_chr10_50794409_50890627	50831940	T T	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG01981.hp2 others(18): Show HG01884.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02258.hp1 HG02258.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp1 HG02897.hp2 HG03139.hp1 HG03139.hp2 HG03516.hp2 HG03540.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA19043.hp1 NA19240.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0007 others(2): Show a0001c0001 a0001c0002 a0001c0007 a0001c0008 a0002c0006	a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 others(8): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0041 a0001c0001t0043 a0001c0002t0004 a0001c0007t0005 a0001c0007t0033 a0001c0008t0001 a0001c0008t0017 a0002c0006t0006	a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 others(15): Show a0001c0001t0008g0006 a0001c0001t0008g0098 a0001c0001t0009g0026 a0001c0001t0009g0158 a0001c0001t0009g0159 a0001c0001t0015g0095 a0001c0001t0015g0096 a0001c0001t0041g0037 a0001c0001t0043g0094 a0001c0002t0004g0036 a0001c0002t0004g0160 a0001c0007t0005g0244 a0001c0007t0033g0245 a0001c0008t0001g0039 a0001c0008t0017g0042 a0002c0006t0006g0044 a0002c0006t0006g0045 a0002c0006t0006g0046	21	338	0.0621	0	c.605 others(8): Show c.605-3645A>G	A1CF	ENSG00000148584.16	transcript	ENST00000373997.8	protein_coding	6/12	chr10	TogoVar

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