Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	chr	external
LAGE3_chrX_154472775_154484281	154478990	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA21309.hp1 NA21309.hp1	a0007 a0007	a0007c0005 a0007c0005	a0007c0005t0006 a0007c0005t0006	a0007c0005t0006g0019 a0007c0005t0006g0019	1	285	0.0035	c.-75 others(3): Show c.-75G>T	LAGE3	ENSG00000196976.8	transcript	ENST00000357360.5	protein_coding	1/3	chrX	TogoVar
LAIR2_chr19_54497831_54515687	54502850	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02145.hp2 HG02572.hp1 HG02602.hp1 others(8): Show HG02145.hp2 HG02572.hp1 HG02602.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG03098.hp1 HG03453.hp1 HG03516.hp2 HG03710.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0006	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0005c0006 a0006c0005	a0001c0001t0006 a0001c0001t0008 a0002c0002t0006 others(4): Show a0001c0001t0006 a0001c0001t0008 a0002c0002t0006 a0002c0002t0008 a0003c0003t0014 a0005c0006t0006 a0006c0005t0009	a0001c0001t0006g0144 a0001c0001t0008g0050 a0002c0002t0006g0021 others(5): Show a0001c0001t0006g0144 a0001c0001t0008g0050 a0002c0002t0006g0021 a0002c0002t0006g0113 a0002c0002t0008g0030 a0003c0003t0014g0015 a0005c0006t0006g0076 a0006c0005t0009g0033	11	475	0.0232	c.-69 others(3): Show c.-69C>T	LAIR2	ENSG00000167618.10	transcript	ENST00000301202.7	protein_coding	1/5	chr19	TogoVar
LAMA3_chr18_23684453_23960066	23689490	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19085.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0166 a0001c0001t0007g0166	1	280	0.0036	c.-19 others(4): Show c.-194A>T	LAMA3	ENSG00000053747.17	transcript	ENST00000313654.14	protein_coding	1/75	chr18	TogoVar
LAMC1_chr1_183018420_183150592	183023515	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0027 a0002c0027	a0002c0027t0030 a0002c0027t0030	a0002c0027t0030g0113 a0002c0027t0030g0113	1	308	0.0033	c.-20 others(4): Show c.-202G>T	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding	1/28	chr1	TogoVar
LAMC1_chr1_183018420_183150592	183023609	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0020 a0001c0020	a0001c0020t0026 a0001c0020t0026	a0001c0020t0026g0132 a0001c0020t0026g0132	1	308	0.0033	c.-10 others(4): Show c.-108C>T	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding	1/28	chr1	TogoVar
LAMP1_chr13_113292239_113328672	113297293	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00609.hp2 HG02129.hp1 NA18978.hp2 HG00609.hp2 HG02129.hp1 NA18978.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0010c0012 a0001c0001 a0010c0012	a0001c0001t0008 a0010c0012t0008 a0001c0001t0008 a0010c0012t0008	a0001c0001t0008g0152 a0001c0001t0008g0234 a0010c0012t0008g0091 a0001c0001t0008g0152 a0001c0001t0008g0234 a0010c0012t0008g0091	3	354	0.0085	c.-14 others(4): Show c.-142C>T	LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding	1/9	chr13	TogoVar
LAMP1_chr13_113292239_113328672	113297414	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00639.hp1 HG01109.hp1 HG01243.hp2 others(33): Show HG00639.hp1 HG01109.hp1 HG01243.hp2 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp2 HG02615.hp2 HG02622.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 others(6): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0004c0004t0004 a0004c0004t0012	a0001c0001t0003g0004 a0001c0001t0003g0042 a0001c0001t0003g0043 others(32): Show a0001c0001t0003g0004 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0004g0057 a0001c0001t0004g0059 a0001c0001t0004g0060 a0001c0001t0004g0066 a0001c0001t0004g0070 a0001c0001t0010g0071 a0001c0001t0011g0044 a0001c0001t0013g0058 a0001c0001t0014g0051 a0001c0001t0015g0086 a0004c0004t0004g0045 a0004c0004t0004g0046 a0004c0004t0004g0047 a0004c0004t0004g0048 a0004c0004t0004g0049 a0004c0004t0004g0050 a0004c0004t0004g0053 a0004c0004t0004g0054 a0004c0004t0012g0052	36	354	0.1017	c.-21 others(3): Show c.-21C>T	LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding	1/9	chr13	TogoVar
LAMP3_chr3_183117215_183167734	183162707	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00642.hp2 HG01346.hp2 HG01952.hp1 others(9): Show HG00642.hp2 HG01346.hp2 HG01952.hp1 HG01978.hp1 HG02280.hp2 HG02602.hp1 HG02738.hp2 HG03490.hp1 HG03492.hp1 HG03927.hp2 HG06807.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0004 a0001c0001t0004 a0002c0002t0004	a0001c0001t0004g0024 a0001c0001t0004g0331 a0002c0002t0004g0326 others(8): Show a0001c0001t0004g0024 a0001c0001t0004g0331 a0002c0002t0004g0326 a0002c0002t0004g0327 a0002c0002t0004g0328 a0002c0002t0004g0329 a0002c0002t0004g0330 a0002c0002t0004g0332 a0002c0002t0004g0333 a0002c0002t0004g0334 a0002c0002t0004g0335	12	372	0.0323	c.-52 others(3): Show c.-52G>T	LAMP3	ENSG00000078081.8	transcript	ENST00000265598.8	protein_coding	1/6	chr3	TogoVar
LAMP5_chr20_9509590_9535524	9514640	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(376): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18955.hp1 NA18955.hp2 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18987.hp1 NA18987.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19072.hp1 NA19072.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19085.hp1 NA19089.hp1 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0004c0005 a0005c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(17): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 a0002c0002t0016 a0002c0002t0017 a0003c0003t0001 a0003c0003t0003 a0004c0005t0013 a0005c0004t0004	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(310): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0048 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0001g0257 a0001c0001t0001g0260 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0284 a0001c0001t0001g0287 a0001c0001t0001g0289 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0305 a0001c0001t0003g0004 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0074 a0001c0001t0003g0101 a0001c0001t0003g0125 a0001c0001t0003g0162 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0003g0180 a0001c0001t0003g0181 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0186 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0169 a0001c0001t0004g0233 a0001c0001t0004g0234 a0001c0001t0004g0254 a0001c0001t0004g0256 a0001c0001t0004g0258 a0001c0001t0004g0259 a0001c0001t0004g0261 a0001c0001t0004g0262 a0001c0001t0004g0263 a0001c0001t0004g0264 a0001c0001t0004g0265 a0001c0001t0004g0266 a0001c0001t0004g0271 a0001c0001t0004g0275 a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0004g0278 a0001c0001t0004g0280 a0001c0001t0004g0288 a0001c0001t0004g0291 a0001c0001t0004g0292 a0001c0001t0004g0306 a0001c0001t0005g0045 a0001c0001t0005g0270 a0001c0001t0005g0285 a0001c0001t0005g0290 a0001c0001t0006g0126 a0001c0001t0006g0213 a0001c0001t0006g0214 a0001c0001t0006g0223 a0001c0001t0008g0191 a0001c0001t0008g0192 a0001c0001t0010g0203 a0001c0001t0011g0085 a0001c0001t0012g0235 a0001c0001t0014g0279 a0001c0001t0015g0283 a0002c0002t0001g0008 a0002c0002t0001g0049 a0002c0002t0001g0054 a0002c0002t0001g0055 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0300 a0002c0002t0001g0301 a0002c0002t0001g0316 a0002c0002t0001g0339 a0002c0002t0001g0343 a0002c0002t0001g0344 a0002c0002t0001g0346 a0002c0002t0001g0347 a0002c0002t0001g0348 a0002c0002t0001g0349 a0002c0002t0001g0350 a0002c0002t0001g0351 a0002c0002t0001g0352 a0002c0002t0001g0353 a0002c0002t0001g0354 a0002c0002t0001g0357 a0002c0002t0001g0358 a0002c0002t0001g0360 a0002c0002t0001g0361 a0002c0002t0001g0364 a0002c0002t0003g0047 a0002c0002t0003g0299 a0002c0002t0003g0302 a0002c0002t0003g0304 a0002c0002t0003g0307 a0002c0002t0003g0309 a0002c0002t0003g0362 a0002c0002t0005g0046 a0002c0002t0005g0296 a0002c0002t0016g0303 a0002c0002t0017g0359 a0003c0003t0001g0062 a0003c0003t0001g0063 a0003c0003t0001g0064 a0003c0003t0003g0058 a0003c0003t0003g0059 a0003c0003t0003g0060 a0003c0003t0003g0061 a0004c0005t0013g0106 a0005c0004t0004g0286	379	448	0.8460	c.-21 others(4): Show c.-213C>T	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding	1/6	chr20	TogoVar
LAMP5_chr20_9509590_9535524	9514650	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(63): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00639.hp1 HG00738.hp1 HG01074.hp1 HG01081.hp1 HG01109.hp1 HG01123.hp1 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01433.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01981.hp1 HG02071.hp1 HG02109.hp1 HG02145.hp2 HG02280.hp2 HG02451.hp1 HG02486.hp2 HG02572.hp2 HG02602.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02735.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03927.hp1 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18906.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0005c0004	a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 others(8): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0014 a0001c0001t0015 a0002c0002t0003 a0002c0002t0007 a0002c0002t0016 a0002c0002t0017 a0003c0003t0003 a0005c0004t0004	a0001c0001t0003g0004 a0001c0001t0003g0012 a0001c0001t0003g0034 others(59): Show a0001c0001t0003g0004 a0001c0001t0003g0012 a0001c0001t0003g0034 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0074 a0001c0001t0003g0101 a0001c0001t0003g0125 a0001c0001t0003g0162 a0001c0001t0003g0176 a0001c0001t0003g0177 a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0003g0180 a0001c0001t0003g0181 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0186 a0001c0001t0004g0043 a0001c0001t0004g0044 a0001c0001t0004g0169 a0001c0001t0004g0233 a0001c0001t0004g0234 a0001c0001t0004g0254 a0001c0001t0004g0256 a0001c0001t0004g0258 a0001c0001t0004g0259 a0001c0001t0004g0261 a0001c0001t0004g0262 a0001c0001t0004g0263 a0001c0001t0004g0264 a0001c0001t0004g0265 a0001c0001t0004g0266 a0001c0001t0004g0271 a0001c0001t0004g0275 a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0004g0278 a0001c0001t0004g0280 a0001c0001t0004g0288 a0001c0001t0004g0291 a0001c0001t0004g0292 a0001c0001t0004g0306 a0001c0001t0007g0001 a0001c0001t0007g0005 a0001c0001t0014g0279 a0001c0001t0015g0283 a0002c0002t0003g0047 a0002c0002t0003g0299 a0002c0002t0003g0302 a0002c0002t0003g0304 a0002c0002t0003g0307 a0002c0002t0003g0309 a0002c0002t0003g0362 a0002c0002t0007g0068 a0002c0002t0016g0303 a0002c0002t0017g0359 a0003c0003t0003g0058 a0003c0003t0003g0059 a0003c0003t0003g0060 a0003c0003t0003g0061 a0005c0004t0004g0286	66	448	0.1473	c.-20 others(4): Show c.-203C>T	LAMP5	ENSG00000125869.10	transcript	ENST00000246070.3	protein_coding	1/6	chr20	TogoVar
LAMTOR5_chr1_110396253_110412694	110407655	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00558.hp2 HG01074.hp1 HG01192.hp1 others(25): Show HG00558.hp2 HG01074.hp1 HG01192.hp1 HG01192.hp2 HG01258.hp2 HG01358.hp1 HG01975.hp2 HG02559.hp2 HG02572.hp1 HG02698.hp2 HG02717.hp2 HG03041.hp2 HG03139.hp2 HG03490.hp2 HG03492.hp2 HG03540.hp2 HG03927.hp2 HG03942.hp2 HG04199.hp1 NA18522.hp2 NA18964.hp1 NA18984.hp1 NA18993.hp2 NA19006.hp1 NA19043.hp1 NA19058.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0007 a0001c0001t0002g0017 a0001c0001t0002g0024 others(4): Show a0001c0001t0002g0007 a0001c0001t0002g0017 a0001c0001t0002g0024 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057	28	446	0.0628	c.-35 others(3): Show c.-35C>T	LAMTOR5	ENSG00000134248.14	transcript	ENST00000602318.6	protein_coding	1/4	chr1	TogoVar
LAP3_chr4_17572198_17612970	17577206	A A	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02922.hp2 HG02970.hp2 HG02922.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0008 a0001c0004t0009 a0001c0001t0008 a0001c0004t0009	a0001c0001t0008g0021 a0001c0004t0009g0020 a0001c0001t0008g0021 a0001c0004t0009g0020	2	300	0.0067	c.-26 others(4): Show c.-260A>C	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding	1/13	chr4	TogoVar
LAP3_chr4_17572198_17612970	17577222	A A	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02922.hp2 HG02970.hp2 HG02922.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0008 a0001c0004t0009 a0001c0001t0008 a0001c0004t0009	a0001c0001t0008g0021 a0001c0004t0009g0020 a0001c0001t0008g0021 a0001c0004t0009g0020	2	300	0.0067	c.-24 others(4): Show c.-244A>C	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding	1/13	chr4	TogoVar
LAP3_chr4_17572198_17612970	17577238	A A	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0009 a0001c0004t0009	a0001c0004t0009g0020 a0001c0004t0009g0020	1	300	0.0033	c.-22 others(4): Show c.-228A>C	LAP3	ENSG00000002549.13	transcript	ENST00000226299.9	protein_coding	1/13	chr4	TogoVar
LARGE1_chr22_33267509_33925476	33761539	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01071.hp1 HG01255.hp1 HG02615.hp1 HG01071.hp1 HG01255.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0016 a0001c0001 a0001c0016	a0001c0001t0025 a0001c0001t0026 a0001c0016t0020 a0001c0001t0025 a0001c0001t0026 a0001c0016t0020	a0001c0001t0025g0087 a0001c0001t0026g0091 a0001c0016t0020g0002 a0001c0001t0025g0087 a0001c0001t0026g0091 a0001c0016t0020g0002	3	110	0.0273	c.-63 others(3): Show c.-63C>T	LARGE1	ENSG00000133424.22	transcript	ENST00000397394.8	protein_coding	2/15	chr22	TogoVar
LARP1B_chr4_128056312_128216988	128061332	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0106 a0001c0001t0017g0106	1	336	0.0030	c.-14 others(4): Show c.-147C>T	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	1/20	chr4	TogoVar
LARP4B_chr10_804497_936705	931553	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02647.hp1 HG02723.hp2 NA20129.hp2 HG02647.hp1 HG02723.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0268 a0001c0001t0017g0269 a0001c0001t0017g0270 a0001c0001t0017g0268 a0001c0001t0017g0269 a0001c0001t0017g0270	3	288	0.0104	c.-16 others(4): Show c.-165C>T	LARP4B	ENSG00000107929.16	transcript	ENST00000316157.8	protein_coding	1/18	chr10	TogoVar
LARP7_chr4_112632143_112662586	112637148	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02015.hp2 HG02015.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0129 a0002c0002t0009g0129	1	420	0.0024	c.-94 others(3): Show c.-94A>G	LARP7	ENSG00000174720.18	transcript	ENST00000344442.10	protein_coding	1/13	chr4	TogoVar
LARP7_chr4_112632143_112662586	112637203	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01109.hp1 HG02155.hp2 HG02165.hp1 others(12): Show HG01109.hp1 HG02155.hp2 HG02165.hp1 HG02976.hp1 HG03139.hp1 HG03195.hp1 NA18941.hp1 NA18943.hp1 NA18953.hp2 NA18965.hp1 NA18987.hp2 NA19006.hp1 NA19010.hp2 NA19060.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0215 a0001c0001t0003g0216 a0001c0001t0003g0217 others(12): Show a0001c0001t0003g0215 a0001c0001t0003g0216 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0223 a0001c0001t0003g0228 a0001c0001t0003g0229 a0001c0001t0003g0230 a0001c0001t0003g0242 a0001c0001t0003g0243 a0001c0001t0003g0254	15	420	0.0357	c.-39 others(3): Show c.-39C>T	LARP7	ENSG00000174720.18	transcript	ENST00000344442.10	protein_coding	1/13	chr4	TogoVar
LARS2_chr3_45383576_45554407	45388630	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0013 a0001c0003t0013	a0001c0003t0013g0027 a0001c0003t0013g0027	1	242	0.0041	c.-13 others(4): Show c.-138A>G	LARS2	ENSG00000011376.12	transcript	ENST00000645846.2	protein_coding	1/22	chr3	TogoVar
LAS1L_chrX_65507582_65539787	65534729	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0021 a0001c0001t0002g0021	1	203	0.0049	c.-14 others(3): Show c.-14T>C	LAS1L	ENSG00000001497.18	transcript	ENST00000374811.8	protein_coding	1/14	chrX	TogoVar
LATS2_chr13_20968036_21066586	21046182	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19079.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0100 a0001c0001t0047g0100	1	316	0.0032	c.-15 others(4): Show c.-156A>G	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/8	chr13	TogoVar
LBHD1_chr11_62657817_62677267	62672097	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp2 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG02895.hp1 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03491.hp1 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp1 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18972.hp1 NA18972.hp2 NA18980.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19075.hp1 NA19075.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19089.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0005 others(1): Show a0001 a0003 a0005 a0006	a0001c0001 a0001c0004 a0003c0003 others(2): Show a0001c0001 a0001c0004 a0003c0003 a0005c0006 a0006c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0004t0001 a0003c0003t0001 a0005c0006t0001 a0006c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(100): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0039 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0002g0001 a0001c0001t0002g0007 a0001c0001t0002g0009 a0001c0001t0002g0015 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0034 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0040 a0001c0001t0002g0078 a0001c0001t0002g0086 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0096 a0001c0001t0002g0103 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0117 a0001c0001t0002g0118 a0001c0001t0002g0126 a0001c0001t0002g0132 a0001c0001t0002g0135 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0004g0005 a0001c0001t0004g0012 a0001c0001t0004g0022 a0001c0001t0004g0033 a0001c0001t0004g0044 a0001c0001t0004g0099 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0004g0138 a0001c0001t0007g0110 a0001c0001t0008g0150 a0001c0004t0001g0082 a0003c0003t0001g0123 a0003c0003t0001g0124 a0005c0006t0001g0145 a0006c0005t0001g0122	268	360	0.7444	c.-54 others(4): Show c.-544C>T	LBHD1	ENSG00000162194.13	transcript	ENST00000354588.8	protein_coding	1/7	chr11	TogoVar
LBHD2_chr14_103079210_103095027	103084312	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00642.hp2 HG01123.hp1 HG01496.hp1 others(3): Show HG00642.hp2 HG01123.hp1 HG01496.hp1 HG02735.hp2 HG03017.hp2 HG03239.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0003 a0003c0003t0003g0038 a0003c0003t0003g0003 a0003c0003t0003g0038	6	432	0.0139	c.-73 others(3): Show c.-73C>T	LBHD2	ENSG00000283071.1	transcript	ENST00000634353.1	protein_coding	1/4	chr14	TogoVar
LBH_chr2_30226534_30265028	30231596	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18612.hp1 NA18972.hp2 NA18979.hp2 NA18612.hp1 NA18972.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0026 a0001c0001t0018g0122 a0001c0001t0018g0026 a0001c0001t0018g0122	3	396	0.0076	c.-14 others(4): Show c.-143C>T	LBH	ENSG00000213626.13	transcript	ENST00000395323.9	protein_coding	1/3	chr2	TogoVar
LCA5L_chr21_39400728_39450778	39435434	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00280.hp1 HG00642.hp1 HG00642.hp2 others(75): Show HG00280.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG01070.hp1 HG01074.hp1 HG01081.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01346.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01516.hp2 HG01517.hp1 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02280.hp1 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03486.hp1 HG03486.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18950.hp2 NA18985.hp2 NA19009.hp1 NA19030.hp1 NA19080.hp1 NA19088.hp1 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0002 a0005 a0002 a0005	a0002c0002 a0005c0004 a0002c0002 a0005c0004	a0002c0002t0002 a0002c0002t0006 a0002c0002t0007 others(2): Show a0002c0002t0002 a0002c0002t0006 a0002c0002t0007 a0005c0004t0002 a0005c0004t0008	a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0014 others(72): Show a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0014 a0002c0002t0002g0169 a0002c0002t0002g0170 a0002c0002t0002g0171 a0002c0002t0002g0216 a0002c0002t0002g0217 a0002c0002t0002g0220 a0002c0002t0002g0221 a0002c0002t0002g0222 a0002c0002t0002g0223 a0002c0002t0002g0224 a0002c0002t0002g0225 a0002c0002t0002g0226 a0002c0002t0002g0227 a0002c0002t0002g0228 a0002c0002t0002g0229 a0002c0002t0002g0230 a0002c0002t0002g0231 a0002c0002t0002g0232 a0002c0002t0002g0233 a0002c0002t0002g0234 a0002c0002t0002g0235 a0002c0002t0002g0236 a0002c0002t0002g0237 a0002c0002t0002g0238 a0002c0002t0002g0239 a0002c0002t0002g0240 a0002c0002t0002g0241 a0002c0002t0002g0242 a0002c0002t0002g0243 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0246 a0002c0002t0002g0247 a0002c0002t0002g0248 a0002c0002t0002g0249 a0002c0002t0002g0250 a0002c0002t0002g0251 a0002c0002t0002g0252 a0002c0002t0002g0253 a0002c0002t0002g0254 a0002c0002t0002g0255 a0002c0002t0002g0256 a0002c0002t0002g0257 a0002c0002t0002g0258 a0002c0002t0002g0259 a0002c0002t0002g0260 a0002c0002t0002g0261 a0002c0002t0002g0262 a0002c0002t0002g0263 a0002c0002t0002g0264 a0002c0002t0002g0265 a0002c0002t0002g0266 a0002c0002t0002g0267 a0002c0002t0002g0268 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0002g0271 a0002c0002t0002g0272 a0002c0002t0002g0273 a0002c0002t0002g0274 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0002g0277 a0002c0002t0002g0278 a0002c0002t0002g0279 a0002c0002t0002g0280 a0002c0002t0002g0281 a0002c0002t0002g0282 a0002c0002t0006g0218 a0002c0002t0007g0283 a0005c0004t0002g0219 a0005c0004t0008g0313	78	340	0.2294	c.-10 others(4): Show c.-106A>G	LCA5L	ENSG00000157578.14	transcript	ENST00000288350.8	protein_coding	3/11	chr21	TogoVar
LCE1B_chr1_152806971_152818108	152812424	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00597.hp1 HG02040.hp2 HG02132.hp2 others(5): Show HG00597.hp1 HG02040.hp2 HG02132.hp2 NA18942.hp1 NA18955.hp2 NA18994.hp2 NA18995.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	8	440	0.0182	c.-23 others(3): Show c.-23A>T	LCE1B	ENSG00000196734.9	transcript	ENST00000360090.4	protein_coding	1/1	chr1	TogoVar
LCE1C_chr1_152799832_152811651	152805488	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00140.hp2 HG00280.hp1 others(44): Show HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00558.hp1 HG00733.hp1 HG00741.hp2 HG01071.hp2 HG01106.hp1 HG01109.hp2 HG01167.hp1 HG01168.hp1 HG01175.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01496.hp2 HG01515.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02083.hp2 HG02300.hp1 HG02559.hp2 HG02647.hp1 HG02683.hp1 HG02723.hp1 HG02965.hp2 HG03130.hp2 HG03516.hp2 HG03669.hp1 HG04115.hp2 NA18945.hp2 NA18954.hp1 NA18966.hp1 NA18986.hp2 NA18994.hp1 NA18998.hp1 NA19078.hp1 NA20129.hp1 NA20752.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0003 a0001c0003t0003g0007 a0001c0003t0003g0026 others(2): Show a0001c0003t0003g0003 a0001c0003t0003g0007 a0001c0003t0003g0026 a0001c0003t0003g0029 a0001c0003t0003g0043	47	422	0.1114	c.-10 others(3): Show c.-10C>T	LCE1C	ENSG00000197084.6	transcript	ENST00000607093.2	protein_coding	2/2	chr1	TogoVar
LCE1E_chr1_152781257_152793426	152786290	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(53): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00733.hp1 HG00741.hp1 HG01069.hp1 HG01071.hp2 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01168.hp2 HG01175.hp1 HG01258.hp1 HG01358.hp1 HG01496.hp2 HG01515.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02055.hp2 HG02083.hp1 HG02280.hp1 HG02300.hp1 HG02559.hp2 HG02622.hp1 HG02647.hp1 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02723.hp1 HG02809.hp1 HG02886.hp2 HG02895.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03130.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03471.hp1 HG03486.hp1 HG03516.hp2 HG03669.hp1 HG04115.hp2 NA18945.hp2 NA18966.hp1 NA18974.hp1 NA18994.hp2 NA19030.hp2 NA20129.hp1 NA20752.hp2 NA21309.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0003 a0001c0003t0003g0003	56	410	0.1366	c.-40 others(3): Show c.-40G>C	LCE1E	ENSG00000186226.9	transcript	ENST00000368770.4	protein_coding	1/2	chr1	TogoVar
LCE2B_chr1_152681123_152692397	152686129	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02280.hp2 HG02809.hp2 HG02280.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0001 a0001c0001t0006g0001	2	446	0.0045	c.-48 others(3): Show c.-48C>T	LCE2B	ENSG00000159455.9	transcript	ENST00000368780.4	protein_coding	1/2	chr1	TogoVar
LCE2C_chr1_152670279_152681569	152675302	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02572.hp2 HG03041.hp2 NA18906.hp2 HG02572.hp2 HG03041.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0001 a0001c0001t0003g0001	3	426	0.0070	c.-48 others(3): Show c.-48G>A	LCE2C	ENSG00000187180.4	transcript	ENST00000368783.2	protein_coding	1/2	chr1	TogoVar
LCE3D_chr1_152574381_152585516	152580510	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0013 a0001c0001t0003g0013	1	342	0.0029	c.-63 others(3): Show c.-63C>T	LCE3D	ENSG00000163202.5	transcript	ENST00000368787.4	protein_coding	1/2	chr1	TogoVar
LCE4A_chr1_152703160_152714434	152709061	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01175.hp2 HG01952.hp1 HG02071.hp2 others(3): Show HG01175.hp2 HG01952.hp1 HG02071.hp2 HG02293.hp2 NA18747.hp1 NA18956.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0001 a0001c0001t0003g0001	6	416	0.0144	c.-15 others(3): Show c.-15C>T	LCE4A	ENSG00000187170.6	transcript	ENST00000368777.2	protein_coding	2/2	chr1	TogoVar
LCMT2_chr15_43318649_43335573	43330550	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0000 a0001c0001t0034g0000	1	410	0.0024	c.-61 others(3): Show c.-61G>A	LCMT2	ENSG00000168806.8	transcript	ENST00000305641.7	protein_coding	1/1	chr15	TogoVar
LCN1_chr9_135516440_135531540	135521493	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0002 a0001c0001t0005g0002	1	436	0.0023	c.-5C others(2): Show c.-5C>T	LCN1	ENSG00000160349.10	transcript	ENST00000371781.4	protein_coding	1/7	chr9	TogoVar
LCN6_chr9_136739017_136753525	136748509	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00280.hp1 HG00280.hp2 others(186): Show HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01106.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01928.hp1 HG01943.hp2 HG01975.hp1 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02040.hp2 HG02055.hp2 HG02056.hp2 HG02071.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp2 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02698.hp1 HG02735.hp2 HG02809.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03492.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp1 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18959.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18977.hp1 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp2 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18988.hp2 NA18990.hp1 NA18990.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19054.hp1 NA19056.hp1 NA19056.hp2 NA19058.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19067.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp2 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19089.hp1 NA19089.hp2 NA20805.hp2 NA20905.hp2	a0001 a0003 a0004 others(2): Show a0001 a0003 a0004 a0005 a0006	a0001c0001 a0001c0004 a0003c0003 others(3): Show a0001c0001 a0001c0004 a0003c0003 a0004c0005 a0005c0006 a0006c0008	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(6): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0004t0002 a0003c0003t0002 a0004c0005t0002 a0005c0006t0002 a0006c0008t0002	a0001c0001t0002g0001 a0001c0001t0002g0011 a0001c0001t0002g0026 others(26): Show a0001c0001t0002g0001 a0001c0001t0002g0011 a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0005g0052 a0001c0001t0006g0067 a0001c0001t0007g0068 a0001c0004t0002g0007 a0003c0003t0002g0010 a0004c0005t0002g0017 a0005c0006t0002g0053 a0005c0006t0002g0054 a0006c0008t0002g0069	189	396	0.4773	c.-26 others(3): Show c.-26C>T	LCN6	ENSG00000267206.6	transcript	ENST00000341206.9	protein_coding	1/7	chr9	TogoVar
LCNL1_chr9_136977993_136990758	136983167	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00609.hp2 HG02071.hp2 NA19010.hp2 HG00609.hp2 HG02071.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0001 a0001c0001t0006g0001	3	382	0.0079	c.-42 others(4): Show c.-420C>T	LCNL1	ENSG00000214402.7	transcript	ENST00000408973.3	protein_coding	1/3	chr9	TogoVar
LCOR_chr10_96827298_97000956	96832371	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18944.hp1 NA18944.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0039 a0002c0002t0039	a0002c0002t0039g0084 a0002c0002t0039g0084	1	288	0.0035	c.-43 others(4): Show c.-432G>C	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	1/8	chr10	TogoVar
LCTL_chr15_66542532_66570998	66565901	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00280.hp2 HG00639.hp1 HG01515.hp2 others(10): Show HG00280.hp2 HG00639.hp1 HG01515.hp2 HG01517.hp2 HG01934.hp2 HG01978.hp2 HG02145.hp2 HG02257.hp2 HG02602.hp2 HG03225.hp1 HG03688.hp1 HG04199.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0003 a0001c0001t0006 a0001c0001t0015 others(1): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0015 a0001c0012t0003	a0001c0001t0003g0054 a0001c0001t0003g0238 a0001c0001t0003g0241 others(9): Show a0001c0001t0003g0054 a0001c0001t0003g0238 a0001c0001t0003g0241 a0001c0001t0003g0242 a0001c0001t0003g0243 a0001c0001t0003g0244 a0001c0001t0003g0246 a0001c0001t0006g0239 a0001c0001t0006g0240 a0001c0001t0006g0245 a0001c0001t0015g0247 a0001c0012t0003g0248	13	434	0.0300	c.-67 others(3): Show c.-67A>G	LCTL	ENSG00000188501.12	transcript	ENST00000695545.1	protein_coding	1/14	chr15	TogoVar
LDAF1_chr16_21153674_21185616	21158719	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18970.hp1 NA18970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0194 a0001c0001t0017g0194	1	390	0.0026	c.-12 others(4): Show c.-126G>T	LDAF1	ENSG00000011638.11	transcript	ENST00000233047.9	protein_coding	1/5	chr16	TogoVar
LDAF1_chr16_21153674_21185616	21161109	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0001 a0001c0001t0010g0001	1	390	0.0026	c.-74 others(3): Show c.-74T>C	LDAF1	ENSG00000011638.11	transcript	ENST00000233047.9	protein_coding	2/5	chr16	TogoVar
LDHAL6A_chr11_18450856_18484601	18456510	T T	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0061 a0001c0001t0061	a0001c0001t0061g0270 a0001c0001t0061g0270	1	420	0.0024	c.-17 others(4): Show c.-171T>G	LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	1/7	chr11	TogoVar
LDHAL6A_chr11_18450856_18484601	18456665	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18612.hp1 NA18988.hp1 NA18612.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0062 a0001c0001t0063 a0001c0001t0062 a0001c0001t0063	a0001c0001t0062g0084 a0001c0001t0063g0098 a0001c0001t0062g0084 a0001c0001t0063g0098	2	420	0.0048	c.-16 others(3): Show c.-16C>T	LDHAL6A	ENSG00000166800.11	transcript	ENST00000280706.3	protein_coding	1/7	chr11	TogoVar
LDHA_chr11_18389563_18413425	18394597	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01884.hp2 HG02572.hp2 HG01884.hp2 HG02572.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0120 a0001c0002t0007g0121 a0001c0002t0007g0120 a0001c0002t0007g0121	2	390	0.0051	c.-64 others(3): Show c.-64T>C	LDHA	ENSG00000134333.15	transcript	ENST00000422447.8	protein_coding	1/8	chr11	TogoVar
LDLRAD1_chr1_54002298_54023186	54018160	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01516.hp2 HG01516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0033 a0001c0001t0011g0033	1	400	0.0025	c.-48 others(3): Show c.-48C>A	LDLRAD1	ENSG00000203985.11	transcript	ENST00000371360.2	protein_coding	1/6	chr1	TogoVar
LEF1_chr4_108042548_108173932	108168017	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02886.hp2 HG02976.hp1 HG02886.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0025 a0001c0001t0024 a0001c0001t0025	a0001c0001t0024g0263 a0001c0001t0025g0262 a0001c0001t0024g0263 a0001c0001t0025g0262	2	264	0.0076	c.-25 others(4): Show c.-250C>T	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	1/12	chr4	TogoVar
LEF1_chr4_108042548_108173932	108168215	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0005 a0001c0001t0016g0005	1	264	0.0038	c.-44 others(4): Show c.-448C>T	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	1/12	chr4	TogoVar
LEF1_chr4_108042548_108173932	108168337	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02886.hp2 HG02976.hp1 HG02886.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0025 a0001c0001t0024 a0001c0001t0025	a0001c0001t0024g0263 a0001c0001t0025g0262 a0001c0001t0024g0263 a0001c0001t0025g0262	2	264	0.0076	c.-57 others(4): Show c.-570A>G	LEF1	ENSG00000138795.10	transcript	ENST00000265165.6	protein_coding	1/12	chr4	TogoVar
LEFTY1_chr1_225881282_225894146	225889138	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02647.hp1 HG02647.hp1	a0008 a0008	a0008c0009 a0008c0009	a0008c0009t0009 a0008c0009t0009	a0008c0009t0009g0052 a0008c0009t0009g0052	1	454	0.0022	c.-72 others(3): Show c.-72C>T	LEFTY1	ENSG00000243709.1	transcript	ENST00000272134.5	protein_coding	1/4	chr1	TogoVar
LEKR1_chr3_156821353_157051129	156826358	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18999.hp2 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0200 a0001c0001t0006g0200	1	244	0.0041	c.-63 others(3): Show c.-63C>T	LEKR1	ENSG00000197980.14	transcript	ENST00000356539.9	protein_coding	1/13	chr3	TogoVar

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