Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	chr	external
LEKR1_chr3_156821353_157051129	156829317	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0215 a0001c0001t0005g0215	1	244	0.0041	c.-13 others(3): Show c.-13A>G	LEKR1	ENSG00000197980.14	transcript	ENST00000356539.9	protein_coding	2/13	chr3	TogoVar
LENG8_chr19_54444199_54467016	54449304	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00423.hp2 HG00423.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0019 a0001c0002t0019	a0001c0002t0019g0001 a0001c0002t0019g0001	1	431	0.0023	c.-62 others(3): Show c.-62C>T	LENG8	ENSG00000167615.18	transcript	ENST00000326764.10	protein_coding	1/16	chr19	TogoVar
LENG9_chr19_54456732_54468778	54463591	T T	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(176): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01074.hp2 HG01106.hp1 HG01109.hp1 HG01109.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01358.hp2 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01884.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02630.hp1 HG02630.hp2 HG02698.hp2 HG03098.hp1 HG03239.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03579.hp2 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG04184.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp1 NA18942.hp2 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18967.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp2 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18984.hp2 NA18986.hp2 NA18988.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19003.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp2 NA19043.hp1 NA19057.hp2 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19079.hp2 NA19080.hp1 NA19082.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19087.hp1 NA19087.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 others(7): Show a0001 a0003 a0004 a0006 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0003c0003 a0004c0006 others(7): Show a0001c0001 a0003c0003 a0004c0006 a0006c0008 a0014c0024 a0015c0022 a0016c0021 a0017c0020 a0018c0019 a0019c0023	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(14): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 a0003c0003t0002 a0003c0003t0003 a0003c0003t0008 a0003c0003t0013 a0004c0006t0002 a0004c0006t0003 a0006c0008t0002 a0014c0024t0002 a0015c0022t0002 a0016c0021t0003 a0017c0020t0002 a0018c0019t0002 a0019c0023t0002	a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0006g0000 others(14): Show a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0006g0000 a0001c0001t0009g0000 a0003c0003t0002g0000 a0003c0003t0003g0000 a0003c0003t0008g0000 a0003c0003t0013g0000 a0004c0006t0002g0000 a0004c0006t0003g0000 a0006c0008t0002g0000 a0014c0024t0002g0000 a0015c0022t0002g0000 a0016c0021t0003g0000 a0017c0020t0002g0000 a0018c0019t0002g0000 a0019c0023t0002g0000	179	421	0.4252	c.-65 others(3): Show c.-65A>T	LENG9	ENSG00000275183.2	transcript	ENST00000611161.2	protein_coding	1/1	chr19	TogoVar
LENG9_chr19_54456732_54468778	54463640	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02055.hp2 HG02630.hp2 HG02055.hp2 HG02630.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0008 a0003c0003t0008	a0003c0003t0008g0000 a0003c0003t0008g0000	2	421	0.0048	c.-11 others(4): Show c.-114C>T	LENG9	ENSG00000275183.2	transcript	ENST00000611161.2	protein_coding	1/1	chr19	TogoVar
LENG9_chr19_54456732_54468778	54463659	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19065.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0000 a0001c0001t0009g0000	1	421	0.0024	c.-13 others(4): Show c.-133G>A	LENG9	ENSG00000275183.2	transcript	ENST00000611161.2	protein_coding	1/1	chr19	TogoVar
LEPROTL1_chr8_30090408_30113524	30095430	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01106.hp1 HG02004.hp2 HG02735.hp1 HG01106.hp1 HG02004.hp2 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0001 a0001c0001t0010g0022 a0001c0001t0010g0116 a0001c0001t0010g0001 a0001c0001t0010g0022 a0001c0001t0010g0116	3	416	0.0072	c.-83 others(3): Show c.-83C>T	LEPROTL1	ENSG00000104660.19	transcript	ENST00000321250.13	protein_coding	1/4	chr8	TogoVar
LEPROT_chr1_65415668_65441007	65420676	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0078 a0001c0001t0078	a0001c0001t0078g0009 a0001c0001t0078g0009	1	402	0.0025	c.-49 others(3): Show c.-49C>T	LEPROT	ENSG00000213625.9	transcript	ENST00000371065.9	protein_coding	1/4	chr1	TogoVar
LEPROT_chr1_65415668_65441007	65420717	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18940.hp2 NA18972.hp1 NA18980.hp2 NA18940.hp2 NA18972.hp1 NA18980.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0077 a0001c0001t0033 a0001c0001t0077	a0001c0001t0033g0029 a0001c0001t0077g0115 a0001c0001t0033g0029 a0001c0001t0077g0115	3	402	0.0075	c.-8C others(2): Show c.-8C>T	LEPROT	ENSG00000213625.9	transcript	ENST00000371065.9	protein_coding	1/4	chr1	TogoVar
LEPR_chr1_65415668_65646559	65420717	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18972.hp1 NA18972.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0049 a0003c0005t0049	a0003c0005t0049g0118 a0003c0005t0049g0118	1	216	0.0046	c.-12 others(4): Show c.-120C>T	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	1/20	chr1	TogoVar
LEPR_chr1_65415668_65646559	65425307	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01978.hp2 HG01978.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0048 a0003c0006t0048	a0003c0006t0048g0134 a0003c0006t0048g0134	1	216	0.0046	c.-92 others(3): Show c.-92C>T	LEPR	ENSG00000116678.20	transcript	ENST00000349533.11	protein_coding	2/20	chr1	TogoVar
LEXM_chr1_54801063_54847252	54806071	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18955.hp1 NA18955.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0230 a0001c0002t0009g0230	1	382	0.0026	c.-46 others(3): Show c.-46C>T	LEXM	ENSG00000162398.12	transcript	ENST00000371273.4	protein_coding	1/10	chr1	TogoVar
LGALS12_chr11_63501084_63521772	63506250	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0003 a0001c0001t0013g0003	1	434	0.0023	c.-20 others(4): Show c.-209C>T	LGALS12	ENSG00000133317.16	transcript	ENST00000394618.9	protein_coding	1/9	chr11	TogoVar
LGALS2_chr22_37565248_37585087	37580019	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0221 a0001c0001t0003g0221	1	460	0.0022	c.-11 others(4): Show c.-114A>G	LGALS2	ENSG00000100079.7	transcript	ENST00000215886.6	protein_coding	1/4	chr22	TogoVar
LGALS2_chr22_37565248_37585087	37580037	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01891.hp2 HG03139.hp1 HG03139.hp2 others(1): Show HG01891.hp2 HG03139.hp1 HG03139.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0034 a0001c0001t0002g0222 a0001c0001t0002g0034 a0001c0001t0002g0222	4	460	0.0087	c.-13 others(4): Show c.-132G>T	LGALS2	ENSG00000100079.7	transcript	ENST00000215886.6	protein_coding	1/4	chr22	TogoVar
LGALS3BP_chr17_78966255_78984923	78979844	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02717.hp1 HG03195.hp2 HG02717.hp1 HG03195.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0004 a0001c0009t0004	a0001c0009t0004g0053 a0001c0009t0004g0053	2	456	0.0044	c.-44 others(3): Show c.-44C>T	LGALS3BP	ENSG00000108679.13	transcript	ENST00000262776.8	protein_coding	1/6	chr17	TogoVar
LGI2_chr4_24993847_25035946	25030890	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00639.hp1 HG00639.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0039 a0002c0002t0039	a0002c0002t0039g0401 a0002c0002t0039g0401	1	454	0.0022	c.-19 others(4): Show c.-197G>T	LGI2	ENSG00000153012.12	transcript	ENST00000382114.9	protein_coding	1/8	chr4	TogoVar
LGI4_chr19_35119513_35140059	35134852	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03831.hp1 HG03831.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0094 a0001c0002t0012g0094	1	398	0.0025	c.-17 others(4): Show c.-172A>G	LGI4	ENSG00000153902.14	transcript	ENST00000310123.8	protein_coding	1/9	chr19	TogoVar
LGR4_chr11_27360961_27477790	27472549	C C	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(164): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00408.hp1 HG00544.hp1 HG00544.hp2 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01070.hp1 HG01070.hp2 HG01099.hp1 HG01109.hp1 HG01109.hp2 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03834.hp1 HG03834.hp2 HG04184.hp1 HG04184.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18946.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18952.hp2 NA18959.hp2 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18971.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18978.hp1 NA18979.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18992.hp2 NA18993.hp1 NA18994.hp2 NA19004.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19030.hp2 NA19054.hp1 NA19057.hp1 NA19058.hp1 NA19062.hp2 NA19068.hp2 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19081.hp2 NA19082.hp1 NA19085.hp1 NA19085.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007	a0001c0001 a0001c0002 a0001c0004 others(10): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0010 a0001c0014 a0002c0003 a0002c0012 a0003c0006 a0004c0009 a0005c0007 a0006c0008 a0007c0013	a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 others(35): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0007 a0001c0001t0010 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0019 a0001c0001t0021 a0001c0001t0024 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0002t0001 a0001c0002t0004 a0001c0002t0005 a0001c0002t0010 a0001c0002t0011 a0001c0002t0017 a0001c0002t0022 a0001c0002t0023 a0001c0002t0025 a0001c0002t0026 a0001c0002t0037 a0001c0004t0013 a0001c0005t0014 a0001c0010t0007 a0001c0014t0005 a0002c0003t0004 a0002c0003t0005 a0002c0012t0003 a0003c0006t0003 a0003c0006t0007 a0004c0009t0005 a0005c0007t0001 a0006c0008t0001 a0007c0013t0004	a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0083 others(163): Show a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0083 a0001c0001t0001g0090 a0001c0001t0001g0095 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0122 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0131 a0001c0001t0001g0137 a0001c0001t0001g0143 a0001c0001t0001g0147 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0072 a0001c0001t0003g0078 a0001c0001t0003g0082 a0001c0001t0003g0089 a0001c0001t0003g0094 a0001c0001t0003g0097 a0001c0001t0003g0105 a0001c0001t0003g0108 a0001c0001t0003g0117 a0001c0001t0003g0130 a0001c0001t0003g0132 a0001c0001t0003g0134 a0001c0001t0003g0142 a0001c0001t0003g0157 a0001c0001t0003g0159 a0001c0001t0003g0160 a0001c0001t0003g0161 a0001c0001t0003g0162 a0001c0001t0003g0164 a0001c0001t0003g0165 a0001c0001t0003g0166 a0001c0001t0007g0014 a0001c0001t0007g0016 a0001c0001t0007g0019 a0001c0001t0007g0020 a0001c0001t0007g0021 a0001c0001t0007g0029 a0001c0001t0007g0031 a0001c0001t0007g0039 a0001c0001t0007g0040 a0001c0001t0007g0041 a0001c0001t0007g0051 a0001c0001t0007g0053 a0001c0001t0007g0055 a0001c0001t0010g0015 a0001c0001t0010g0037 a0001c0001t0010g0048 a0001c0001t0010g0058 a0001c0001t0012g0075 a0001c0001t0012g0081 a0001c0001t0012g0084 a0001c0001t0012g0085 a0001c0001t0012g0118 a0001c0001t0012g0119 a0001c0001t0015g0018 a0001c0001t0015g0030 a0001c0001t0015g0043 a0001c0001t0016g0112 a0001c0001t0016g0126 a0001c0001t0016g0129 a0001c0001t0019g0003 a0001c0001t0021g0028 a0001c0001t0024g0125 a0001c0001t0027g0138 a0001c0001t0028g0093 a0001c0001t0029g0106 a0001c0001t0030g0167 a0001c0002t0001g0139 a0001c0002t0001g0148 a0001c0002t0004g0061 a0001c0002t0004g0062 a0001c0002t0004g0066 a0001c0002t0004g0067 a0001c0002t0004g0070 a0001c0002t0004g0071 a0001c0002t0004g0073 a0001c0002t0004g0074 a0001c0002t0004g0076 a0001c0002t0004g0080 a0001c0002t0004g0086 a0001c0002t0004g0087 a0001c0002t0004g0088 a0001c0002t0004g0107 a0001c0002t0004g0113 a0001c0002t0004g0121 a0001c0002t0004g0123 a0001c0002t0004g0124 a0001c0002t0004g0133 a0001c0002t0004g0135 a0001c0002t0004g0136 a0001c0002t0004g0141 a0001c0002t0004g0151 a0001c0002t0005g0001 a0001c0002t0005g0007 a0001c0002t0005g0008 a0001c0002t0005g0010 a0001c0002t0005g0011 a0001c0002t0005g0012 a0001c0002t0005g0022 a0001c0002t0005g0023 a0001c0002t0005g0024 a0001c0002t0005g0025 a0001c0002t0005g0026 a0001c0002t0005g0033 a0001c0002t0005g0034 a0001c0002t0005g0044 a0001c0002t0005g0049 a0001c0002t0005g0050 a0001c0002t0010g0009 a0001c0002t0010g0047 a0001c0002t0011g0077 a0001c0002t0011g0079 a0001c0002t0011g0091 a0001c0002t0011g0144 a0001c0002t0011g0158 a0001c0002t0011g0163 a0001c0002t0017g0005 a0001c0002t0017g0006 a0001c0002t0022g0054 a0001c0002t0023g0056 a0001c0002t0025g0092 a0001c0002t0026g0120 a0001c0002t0037g0242 a0001c0004t0013g0013 a0001c0004t0013g0035 a0001c0004t0013g0036 a0001c0004t0013g0042 a0001c0004t0013g0046 a0001c0005t0014g0149 a0001c0005t0014g0150 a0001c0005t0014g0154 a0001c0005t0014g0155 a0001c0010t0007g0052 a0001c0014t0005g0027 a0002c0003t0004g0145 a0002c0003t0005g0032 a0002c0003t0005g0045 a0002c0012t0003g0156 a0003c0006t0003g0140 a0003c0006t0007g0038 a0004c0009t0005g0017 a0004c0009t0005g0057 a0005c0007t0001g0096 a0005c0007t0001g0116 a0006c0008t0001g0146 a0007c0013t0004g0063	167	244	0.6844	c.-24 others(4): Show c.-247G>C	LGR4	ENSG00000205213.14	transcript	ENST00000379214.9	protein_coding	1/18	chr11	TogoVar
LGR4_chr11_27360961_27477790	27472561	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02486.hp2 HG02622.hp2 HG02630.hp2 HG02486.hp2 HG02622.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0036 a0001c0002t0018 a0001c0001t0036 a0001c0002t0018	a0001c0001t0036g0241 a0001c0002t0018g0239 a0001c0002t0018g0240 a0001c0001t0036g0241 a0001c0002t0018g0239 a0001c0002t0018g0240	3	244	0.0123	c.-25 others(4): Show c.-259G>T	LGR4	ENSG00000205213.14	transcript	ENST00000379214.9	protein_coding	1/18	chr11	TogoVar
LGR4_chr11_27360961_27477790	27472673	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02080.hp1 HG02080.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0037 a0001c0002t0037	a0001c0002t0037g0242 a0001c0002t0037g0242	1	244	0.0041	c.-37 others(4): Show c.-371C>T	LGR4	ENSG00000205213.14	transcript	ENST00000379214.9	protein_coding	1/18	chr11	TogoVar
LGR5_chr12_71434798_71591310	71440043	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01243.hp2 HG01361.hp1 HG02145.hp1 others(5): Show HG01243.hp2 HG01361.hp1 HG02145.hp1 HG02723.hp2 HG03195.hp2 HG03225.hp2 NA18906.hp1 NA18906.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0005c0007 a0001c0001 a0001c0002 a0005c0007	a0001c0001t0006 a0001c0001t0007 a0001c0002t0007 others(1): Show a0001c0001t0006 a0001c0001t0007 a0001c0002t0007 a0005c0007t0006	a0001c0001t0006g0187 a0001c0001t0006g0189 a0001c0001t0006g0192 others(5): Show a0001c0001t0006g0187 a0001c0001t0006g0189 a0001c0001t0006g0192 a0001c0001t0006g0193 a0001c0001t0007g0191 a0001c0002t0007g0186 a0001c0002t0007g0188 a0005c0007t0006g0190	8	200	0.0400	c.-38 others(3): Show c.-38C>T	LGR5	ENSG00000139292.13	transcript	ENST00000266674.10	protein_coding	1/18	chr12	TogoVar
LGSN_chr6_63270951_63324983	63319966	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03492.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0042	a0001c0001t0042g0249 a0001c0001t0042g0249	1	312	0.0032	c.-23 others(3): Show c.-23C>T	LGSN	ENSG00000146166.17	transcript	ENST00000370657.9	protein_coding	1/4	chr6	TogoVar
LHX2_chr9_124006768_124038301	124011819	C C	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01257.hp2 HG01258.hp1 HG01257.hp2 HG01258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0001 a0001c0001t0009g0001	2	402	0.0050	c.-53 others(4): Show c.-530C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	chr9	TogoVar
LHX2_chr9_124006768_124038301	124012292	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19068.hp2 NA19068.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0001 a0001c0001t0015g0001	1	402	0.0025	c.-57 others(3): Show c.-57G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	chr9	TogoVar
LHX2_chr9_124006768_124038301	124012306	C C	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0161 a0001c0002t0014g0161	1	402	0.0025	c.-43 others(3): Show c.-43C>G	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	chr9	TogoVar
LHX2_chr9_124006768_124038301	124012311	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0013 a0001c0006t0013	a0001c0006t0013g0001 a0001c0006t0013g0001	1	402	0.0025	c.-38 others(3): Show c.-38G>T	LHX2	ENSG00000106689.11	transcript	ENST00000373615.9	protein_coding	1/5	chr9	TogoVar
LHX4_chr1_180225264_180283984	180230409	T T	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0170 a0001c0001t0025g0170	1	402	0.0025	c.-12 others(4): Show c.-121T>G	LHX4	ENSG00000121454.6	transcript	ENST00000263726.4	protein_coding	1/6	chr1	TogoVar
LHX5_chr12_113457033_113476871	113471524	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18979.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0066 a0001c0001t0016g0066	1	396	0.0025	c.-26 others(3): Show c.-26G>T	LHX5	ENSG00000089116.4	transcript	ENST00000261731.4	protein_coding	1/5	chr12	TogoVar
LHX9_chr1_197912372_197940478	197917528	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0051 a0001c0001t0051	a0001c0001t0051g0007 a0001c0001t0051g0007	1	420	0.0024	c.-29 others(4): Show c.-296C>T	LHX9	ENSG00000143355.16	transcript	ENST00000367387.6	protein_coding	1/5	chr1	TogoVar
LIAS_chr4_39454056_39484506	39459056	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0199 a0001c0001t0029g0199	1	424	0.0024	c.-62 others(3): Show c.-62C>T	LIAS	ENSG00000121897.15	transcript	ENST00000640888.2	protein_coding	1/11	chr4	TogoVar
LIFR_chr5_38469668_38561646	38556597	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19091.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0063 a0001c0001t0063	a0001c0001t0063g0356 a0001c0001t0063g0356	1	374	0.0027	c.-28 others(4): Show c.-283C>T	LIFR	ENSG00000113594.10	transcript	ENST00000453190.7	protein_coding	1/20	chr5	TogoVar
LIFR_chr5_38469668_38561646	38556627	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0065 a0001c0001t0065	a0001c0001t0065g0358 a0001c0001t0065g0358	1	374	0.0027	c.-31 others(4): Show c.-313C>G	LIFR	ENSG00000113594.10	transcript	ENST00000453190.7	protein_coding	1/20	chr5	TogoVar
LIG1_chr19_48110445_48175344	48165573	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00140.hp1 HG00673.hp1 HG01071.hp2 others(45): Show HG00140.hp1 HG00673.hp1 HG01071.hp2 HG01109.hp2 HG01123.hp2 HG01175.hp1 HG01934.hp2 HG02040.hp2 HG02056.hp2 HG02083.hp1 HG02109.hp2 HG02257.hp2 HG02572.hp1 HG02630.hp1 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02738.hp1 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03471.hp1 HG03491.hp2 HG03669.hp1 HG03834.hp1 HG04199.hp2 HG06807.hp1 NA18522.hp1 NA18950.hp1 NA18965.hp1 NA18985.hp1 NA18998.hp2 NA19002.hp2 NA19012.hp1 NA19066.hp1 NA19085.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20905.hp1 NA21309.hp2	a0000 a0001 a0005 a0000 a0001 a0005	a0000c0013 a0001c0001 a0001c0002 others(3): Show a0000c0013 a0001c0001 a0001c0002 a0001c0004 a0001c0014 a0005c0011	a0000c0013t0007 a0001c0001t0003 a0001c0002t0003 others(4): Show a0000c0013t0007 a0001c0001t0003 a0001c0002t0003 a0001c0004t0003 a0001c0004t0008 a0001c0014t0003 a0005c0011t0003	a0000c0013t0007g0182 a0001c0001t0003g0177 a0001c0001t0003g0183 others(44): Show a0000c0013t0007g0182 a0001c0001t0003g0177 a0001c0001t0003g0183 a0001c0001t0003g0202 a0001c0001t0003g0207 a0001c0001t0003g0217 a0001c0002t0003g0198 a0001c0002t0003g0199 a0001c0002t0003g0218 a0001c0004t0003g0002 a0001c0004t0003g0174 a0001c0004t0003g0175 a0001c0004t0003g0176 a0001c0004t0003g0178 a0001c0004t0003g0179 a0001c0004t0003g0180 a0001c0004t0003g0181 a0001c0004t0003g0184 a0001c0004t0003g0185 a0001c0004t0003g0186 a0001c0004t0003g0187 a0001c0004t0003g0188 a0001c0004t0003g0189 a0001c0004t0003g0191 a0001c0004t0003g0192 a0001c0004t0003g0193 a0001c0004t0003g0194 a0001c0004t0003g0195 a0001c0004t0003g0196 a0001c0004t0003g0197 a0001c0004t0003g0200 a0001c0004t0003g0203 a0001c0004t0003g0204 a0001c0004t0003g0205 a0001c0004t0003g0206 a0001c0004t0003g0208 a0001c0004t0003g0209 a0001c0004t0003g0210 a0001c0004t0003g0211 a0001c0004t0003g0212 a0001c0004t0003g0213 a0001c0004t0003g0214 a0001c0004t0003g0215 a0001c0004t0003g0216 a0001c0004t0008g0328 a0001c0014t0003g0190 a0005c0011t0003g0201	48	330	0.1455	c.-7C others(2): Show c.-7C>T	LIG1	ENSG00000105486.15	transcript	ENST00000263274.12	protein_coding	2/28	chr19	TogoVar
LIG4_chr13_108202442_108220536	108211275	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01891.hp1 HG02809.hp2 HG02886.hp1 others(8): Show HG01891.hp1 HG02809.hp2 HG02886.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03041.hp1 HG03139.hp1 HG03225.hp2 HG03471.hp1 NA20300.hp1	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0005 a0004c0005t0008 a0004c0005t0005 a0004c0005t0008	a0004c0005t0005g0006 a0004c0005t0008g0042 a0004c0005t0008g0043 others(1): Show a0004c0005t0005g0006 a0004c0005t0008g0042 a0004c0005t0008g0043 a0004c0005t0008g0046	11	374	0.0294	c.-7C others(2): Show c.-7C>T	LIG4	ENSG00000174405.15	transcript	ENST00000442234.6	protein_coding	3/3	chr13	TogoVar
LILRA1_chr19_54588632_54607381	54593736	T T	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00733.hp1 HG00735.hp2 HG00741.hp1 others(49): Show HG00733.hp1 HG00735.hp2 HG00741.hp1 HG01168.hp2 HG01243.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG02004.hp2 HG02055.hp2 HG02109.hp2 HG02258.hp2 HG02572.hp1 HG02615.hp1 HG02647.hp2 HG02723.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03471.hp1 HG03490.hp2 HG03492.hp1 HG03516.hp1 HG03579.hp1 HG03704.hp1 HG03710.hp2 HG04184.hp1 HG06807.hp2 NA18522.hp1 NA19030.hp1 NA19240.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1	a0002 a0003 a0006 others(7): Show a0002 a0003 a0006 a0007 a0011 a0012 a0013 a0016 a0017 a0021	a0002c0007 a0002c0009 a0003c0003 others(8): Show a0002c0007 a0002c0009 a0003c0003 a0006c0006 a0007c0008 a0011c0015 a0012c0014 a0013c0013 a0016c0019 a0017c0018 a0021c0020	a0002c0007t0011 a0002c0009t0019 a0003c0003t0004 others(17): Show a0002c0007t0011 a0002c0009t0019 a0003c0003t0004 a0003c0003t0006 a0003c0003t0008 a0003c0003t0014 a0003c0003t0024 a0003c0003t0025 a0003c0003t0026 a0003c0003t0027 a0006c0006t0006 a0006c0006t0015 a0007c0008t0011 a0011c0015t0020 a0012c0014t0008 a0012c0014t0015 a0013c0013t0004 a0016c0019t0004 a0017c0018t0023 a0021c0020t0004	a0002c0007t0011g0018 a0002c0009t0019g0041 a0003c0003t0004g0013 others(29): Show a0002c0007t0011g0018 a0002c0009t0019g0041 a0003c0003t0004g0013 a0003c0003t0004g0019 a0003c0003t0004g0087 a0003c0003t0004g0091 a0003c0003t0006g0020 a0003c0003t0006g0040 a0003c0003t0006g0095 a0003c0003t0006g0096 a0003c0003t0006g0097 a0003c0003t0008g0012 a0003c0003t0008g0020 a0003c0003t0008g0086 a0003c0003t0008g0094 a0003c0003t0014g0012 a0003c0003t0024g0092 a0003c0003t0025g0020 a0003c0003t0026g0085 a0003c0003t0027g0093 a0006c0006t0006g0089 a0006c0006t0006g0090 a0006c0006t0015g0039 a0007c0008t0011g0037 a0007c0008t0011g0079 a0011c0015t0020g0038 a0012c0014t0008g0088 a0012c0014t0015g0084 a0013c0013t0004g0019 a0016c0019t0004g0013 a0017c0018t0023g0080 a0021c0020t0004g0019	52	453	0.1148	c.-94 others(3): Show c.-94T>G	LILRA1	ENSG00000104974.12	transcript	ENST00000251372.8	protein_coding	1/10	chr19	TogoVar
LILRA1_chr19_54588632_54607381	54594241	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00140.hp1 HG00735.hp2 HG01981.hp1 HG00140.hp1 HG00735.hp2 HG01981.hp1	a0001 a0017 a0001 a0017	a0001c0001 a0017c0018 a0001c0001 a0017c0018	a0001c0001t0022 a0017c0018t0023 a0001c0001t0022 a0017c0018t0023	a0001c0001t0022g0003 a0017c0018t0023g0080 a0001c0001t0022g0003 a0017c0018t0023g0080	3	453	0.0066	c.-4C others(2): Show c.-4C>T	LILRA1	ENSG00000104974.12	transcript	ENST00000251372.8	protein_coding	2/10	chr19	TogoVar
LILRA4_chr19_54328185_54344162	54339147	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00621.hp1 HG00639.hp2 others(19): Show HG00099.hp2 HG00621.hp1 HG00639.hp2 HG01261.hp1 HG01361.hp1 HG01981.hp1 NA18941.hp1 NA18946.hp2 NA18953.hp1 NA18954.hp2 NA18965.hp2 NA18972.hp1 NA18978.hp1 NA18978.hp2 NA18999.hp1 NA19066.hp1 NA19081.hp2 NA19084.hp2 NA19088.hp2 NA19090.hp2 NA19091.hp2 NA20905.hp1	a0001 a0007 a0008 a0001 a0007 a0008	a0001c0004 a0001c0034 a0007c0018 others(1): Show a0001c0004 a0001c0034 a0007c0018 a0008c0022	a0001c0004t0003 a0001c0004t0006 a0001c0034t0003 others(2): Show a0001c0004t0003 a0001c0004t0006 a0001c0034t0003 a0007c0018t0003 a0008c0022t0003	a0001c0004t0003g0008 a0001c0004t0003g0032 a0001c0004t0003g0202 others(6): Show a0001c0004t0003g0008 a0001c0004t0003g0032 a0001c0004t0003g0202 a0001c0004t0003g0203 a0001c0004t0003g0204 a0001c0004t0006g0033 a0001c0034t0003g0201 a0007c0018t0003g0059 a0008c0022t0003g0200	22	471	0.0467	c.-54 others(3): Show c.-54C>T	LILRA4	ENSG00000239961.3	transcript	ENST00000291759.5	protein_coding	1/8	chr19	TogoVar
LILRB1_chr19_54625484_54643022	54630504	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03490.hp2 HG03492.hp2 HG03704.hp2 HG03490.hp2 HG03492.hp2 HG03704.hp2	a0014 a0014	a0014c0016 a0014c0016	a0014c0016t0012 a0014c0016t0012	a0014c0016t0012g0034 a0014c0016t0012g0087 a0014c0016t0012g0034 a0014c0016t0012g0087	3	435	0.0069	c.-17 others(4): Show c.-178C>T	LILRB1	ENSG00000104972.16	transcript	ENST00000324602.12	protein_coding	1/15	chr19	TogoVar
LILRB2_chr19_54268812_54286110	54281053	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(96): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00558.hp2 HG00597.hp1 HG00639.hp2 HG00642.hp2 HG00738.hp1 HG01069.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01496.hp1 HG01884.hp2 HG01943.hp1 HG01952.hp1 HG01975.hp2 HG01981.hp2 HG02004.hp2 HG02056.hp1 HG02109.hp2 HG02129.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG03098.hp1 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03669.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 NA18906.hp1 NA18906.hp2 NA18955.hp1 NA18997.hp2 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19065.hp2 NA19090.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1	a0001 a0002 a0003 others(19): Show a0001 a0002 a0003 a0007 a0008 a0010 a0013 a0014 a0018 a0020 a0027 a0028 a0029 a0030 a0031 a0032 a0033 a0034 a0035 a0040 a0041 a0043	a0001c0001 a0002c0002 a0002c0042 others(22): Show a0001c0001 a0002c0002 a0002c0042 a0002c0053 a0003c0003 a0007c0009 a0008c0014 a0008c0041 a0010c0018 a0013c0016 a0014c0021 a0018c0020 a0020c0023 a0027c0030 a0028c0029 a0029c0031 a0030c0032 a0031c0040 a0032c0043 a0033c0045 a0034c0044 a0035c0028 a0040c0049 a0041c0050 a0043c0051	a0001c0001t0027 a0002c0002t0004 a0002c0002t0005 others(29): Show a0001c0001t0027 a0002c0002t0004 a0002c0002t0005 a0002c0002t0008 a0002c0002t0010 a0002c0002t0018 a0002c0002t0029 a0002c0042t0013 a0002c0053t0008 a0003c0003t0004 a0003c0003t0022 a0007c0009t0005 a0008c0014t0004 a0008c0041t0004 a0010c0018t0022 a0013c0016t0005 a0014c0021t0005 a0018c0020t0010 a0018c0020t0013 a0020c0023t0008 a0027c0030t0008 a0028c0029t0010 a0029c0031t0010 a0030c0032t0018 a0031c0040t0005 a0032c0043t0013 a0033c0045t0018 a0034c0044t0005 a0035c0028t0004 a0040c0049t0010 a0041c0050t0010 a0043c0051t0013	a0001c0001t0027g0140 a0002c0002t0004g0002 a0002c0002t0004g0128 others(56): Show a0001c0001t0027g0140 a0002c0002t0004g0002 a0002c0002t0004g0128 a0002c0002t0004g0129 a0002c0002t0004g0132 a0002c0002t0004g0133 a0002c0002t0004g0134 a0002c0002t0004g0135 a0002c0002t0004g0136 a0002c0002t0004g0137 a0002c0002t0004g0138 a0002c0002t0005g0010 a0002c0002t0005g0024 a0002c0002t0005g0052 a0002c0002t0005g0145 a0002c0002t0005g0146 a0002c0002t0005g0150 a0002c0002t0005g0160 a0002c0002t0005g0161 a0002c0002t0005g0162 a0002c0002t0005g0163 a0002c0002t0008g0016 a0002c0002t0008g0017 a0002c0002t0008g0025 a0002c0002t0008g0168 a0002c0002t0008g0170 a0002c0002t0010g0158 a0002c0002t0010g0159 a0002c0002t0018g0157 a0002c0002t0029g0169 a0002c0042t0013g0156 a0002c0053t0008g0177 a0003c0003t0004g0139 a0003c0003t0022g0127 a0007c0009t0005g0023 a0007c0009t0005g0148 a0007c0009t0005g0149 a0008c0014t0004g0049 a0008c0014t0004g0130 a0008c0041t0004g0131 a0010c0018t0022g0125 a0013c0016t0005g0051 a0014c0021t0005g0172 a0014c0021t0005g0173 a0018c0020t0010g0164 a0018c0020t0013g0165 a0020c0023t0008g0147 a0027c0030t0008g0153 a0028c0029t0010g0152 a0029c0031t0010g0171 a0030c0032t0018g0151 a0031c0040t0005g0167 a0032c0043t0013g0166 a0033c0045t0018g0155 a0034c0044t0005g0154 a0035c0028t0004g0126 a0040c0049t0010g0175 a0041c0050t0010g0174 a0043c0051t0013g0176	99	429	0.2308	c.-14 others(4): Show c.-141G>T	LILRB2	ENSG00000131042.15	transcript	ENST00000314446.10	protein_coding	1/14	chr19	TogoVar
LIM2_chr19_51374909_51392974	51387939	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02280.hp1 HG02970.hp1 HG03209.hp2 others(2): Show HG02280.hp1 HG02970.hp1 HG03209.hp2 HG03225.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0026 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0026 a0001c0001t0002g0105 a0001c0001t0002g0106	5	438	0.0114	c.-27 others(3): Show c.-27C>T	LIM2	ENSG00000105370.8	transcript	ENST00000596399.2	protein_coding	1/5	chr19	TogoVar
LIMCH1_chr4_41533157_41705044	41538168	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02109.hp1 HG02486.hp2 HG02922.hp2 others(6): Show HG02109.hp1 HG02486.hp2 HG02922.hp2 HG03130.hp2 HG03209.hp2 HG03516.hp1 HG03579.hp2 NA18522.hp2 NA18906.hp2	a0002 a0003 a0004 others(2): Show a0002 a0003 a0004 a0006 a0007	a0002c0002 a0003c0003 a0004c0005 others(3): Show a0002c0002 a0003c0003 a0004c0005 a0006c0008 a0007c0007 a0007c0011	a0002c0002t0021 a0003c0003t0021 a0003c0003t0034 others(4): Show a0002c0002t0021 a0003c0003t0021 a0003c0003t0034 a0004c0005t0011 a0006c0008t0011 a0007c0007t0012 a0007c0011t0011	a0002c0002t0021g0124 a0003c0003t0021g0147 a0003c0003t0034g0148 others(6): Show a0002c0002t0021g0124 a0003c0003t0021g0147 a0003c0003t0034g0148 a0004c0005t0011g0146 a0006c0008t0011g0125 a0007c0007t0012g0150 a0007c0007t0012g0151 a0007c0007t0012g0152 a0007c0011t0011g0153	9	154	0.0584	c.-42 others(4): Show c.-423C>T	LIMCH1	ENSG00000064042.18	transcript	ENST00000503057.6	protein_coding	1/32	chr4	TogoVar
LIMCH1_chr4_41533157_41705044	41538171	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02109.hp1 HG02486.hp2 HG02922.hp2 others(6): Show HG02109.hp1 HG02486.hp2 HG02922.hp2 HG03130.hp2 HG03209.hp2 HG03516.hp1 HG03579.hp2 NA18522.hp2 NA18906.hp2	a0002 a0003 a0004 others(2): Show a0002 a0003 a0004 a0006 a0007	a0002c0002 a0003c0003 a0004c0005 others(3): Show a0002c0002 a0003c0003 a0004c0005 a0006c0008 a0007c0007 a0007c0011	a0002c0002t0021 a0003c0003t0021 a0003c0003t0034 others(4): Show a0002c0002t0021 a0003c0003t0021 a0003c0003t0034 a0004c0005t0011 a0006c0008t0011 a0007c0007t0012 a0007c0011t0011	a0002c0002t0021g0124 a0003c0003t0021g0147 a0003c0003t0034g0148 others(6): Show a0002c0002t0021g0124 a0003c0003t0021g0147 a0003c0003t0034g0148 a0004c0005t0011g0146 a0006c0008t0011g0125 a0007c0007t0012g0150 a0007c0007t0012g0151 a0007c0007t0012g0152 a0007c0011t0011g0153	9	154	0.0584	c.-42 others(4): Show c.-420A>T	LIMCH1	ENSG00000064042.18	transcript	ENST00000503057.6	protein_coding	1/32	chr4	TogoVar
LIN28B_chr6_104952107_105088332	104957240	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0049 a0001c0001t0027g0049	1	278	0.0036	c.-11 others(3): Show c.-11C>T	LIN28B	ENSG00000187772.8	transcript	ENST00000345080.5	protein_coding	1/4	chr6	TogoVar
LIN37_chr19_35743576_35759519	35748586	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00673.hp1 HG02015.hp1 HG02027.hp1 others(24): Show HG00673.hp1 HG02015.hp1 HG02027.hp1 HG02056.hp2 HG02129.hp2 NA18747.hp2 NA18939.hp1 NA18942.hp2 NA18944.hp2 NA18946.hp1 NA18952.hp1 NA18971.hp1 NA18977.hp2 NA18979.hp2 NA18980.hp2 NA18992.hp1 NA18993.hp1 NA18997.hp1 NA19007.hp2 NA19054.hp2 NA19060.hp2 NA19066.hp1 NA19080.hp2 NA19082.hp2 NA19084.hp1 NA19088.hp2 NA19090.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0006 a0001c0001t0004g0040 a0001c0001t0004g0006 a0001c0001t0004g0040	27	408	0.0662	c.-13 others(4): Show c.-139C>A	LIN37	ENSG00000267796.8	transcript	ENST00000301159.14	protein_coding	1/9	chr19	TogoVar
LINGO1_chr15_77608027_77637912	77632746	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00423.hp2 HG00642.hp1 HG00673.hp2 others(52): Show HG00423.hp2 HG00642.hp1 HG00673.hp2 HG01884.hp2 HG02004.hp2 HG02071.hp2 HG02135.hp1 HG02258.hp1 HG02486.hp2 HG02683.hp2 HG02735.hp1 HG03239.hp2 HG03471.hp1 HG03490.hp2 HG03492.hp1 HG03654.hp2 HG03688.hp2 HG03834.hp2 HG04115.hp1 HG04228.hp2 NA18612.hp2 NA18747.hp2 NA18939.hp1 NA18947.hp2 NA18950.hp1 NA18951.hp1 NA18954.hp1 NA18955.hp2 NA18956.hp2 NA18959.hp2 NA18960.hp2 NA18966.hp2 NA18969.hp2 NA18970.hp2 NA18974.hp2 NA18975.hp1 NA18979.hp2 NA18980.hp2 NA18983.hp2 NA18984.hp1 NA18985.hp1 NA18991.hp2 NA18992.hp1 NA18997.hp2 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19009.hp1 NA19057.hp2 NA19060.hp2 NA19066.hp1 NA19076.hp1 NA19081.hp1 NA19083.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0010 a0001c0001t0022 a0001c0002t0004 others(1): Show a0001c0001t0010 a0001c0001t0022 a0001c0002t0004 a0001c0003t0030	a0001c0001t0010g0030 a0001c0001t0010g0063 a0001c0001t0010g0065 others(18): Show a0001c0001t0010g0030 a0001c0001t0010g0063 a0001c0001t0010g0065 a0001c0001t0022g0055 a0001c0002t0004g0001 a0001c0002t0004g0018 a0001c0002t0004g0029 a0001c0002t0004g0056 a0001c0002t0004g0057 a0001c0002t0004g0058 a0001c0002t0004g0059 a0001c0002t0004g0060 a0001c0002t0004g0061 a0001c0002t0004g0062 a0001c0002t0004g0064 a0001c0002t0004g0066 a0001c0002t0004g0067 a0001c0002t0004g0068 a0001c0002t0004g0069 a0001c0002t0004g0070 a0001c0003t0030g0193	55	386	0.1425	c.-43 others(4): Show c.-431C>T	LINGO1	ENSG00000169783.13	transcript	ENST00000355300.7	protein_coding	1/2	chr15	TogoVar
LINGO2_chr9_27932617_29218601	29213216	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02630.hp1 HG02976.hp1 HG02630.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0035 a0001c0001t0034 a0001c0001t0035	a0001c0001t0034g0061 a0001c0001t0035g0060 a0001c0001t0034g0061 a0001c0001t0035g0060	2	62	0.0323	c.-78 others(4): Show c.-786C>T	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/7	chr9	TogoVar
LIPG_chr18_49557057_49604185	49562285	T T	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00140.hp1 HG00280.hp2 HG00423.hp2 others(92): Show HG00140.hp1 HG00280.hp2 HG00423.hp2 HG00558.hp2 HG00609.hp2 HG00642.hp2 HG00733.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp1 HG01099.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01346.hp2 HG01361.hp2 HG01993.hp1 HG02015.hp1 HG02015.hp2 HG02056.hp2 HG02074.hp2 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02280.hp2 HG02602.hp2 HG02615.hp1 HG02647.hp2 HG02723.hp2 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03239.hp1 HG03486.hp1 HG03491.hp1 HG03669.hp2 HG03710.hp1 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp1 NA18939.hp1 NA18939.hp2 NA18947.hp1 NA18956.hp2 NA18962.hp1 NA18964.hp1 NA18970.hp2 NA18974.hp1 NA18981.hp1 NA18981.hp2 NA18983.hp1 NA18983.hp2 NA18991.hp2 NA18998.hp1 NA18998.hp2 NA19005.hp1 NA19010.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19079.hp1 NA19080.hp1 NA19083.hp1 NA19084.hp1 NA19087.hp2 NA19240.hp2 NA20752.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0011 a0002c0002 others(3): Show a0001c0001 a0001c0011 a0002c0002 a0002c0012 a0002c0013 a0004c0006	a0001c0001t0020 a0001c0001t0048 a0001c0001t0049 others(39): Show a0001c0001t0020 a0001c0001t0048 a0001c0001t0049 a0001c0001t0052 a0001c0001t0053 a0001c0001t0055 a0001c0001t0056 a0001c0001t0061 a0001c0011t0068 a0002c0002t0004 a0002c0002t0005 a0002c0002t0009 a0002c0002t0014 a0002c0002t0020 a0002c0002t0021 a0002c0002t0022 a0002c0002t0023 a0002c0002t0028 a0002c0002t0030 a0002c0002t0031 a0002c0002t0050 a0002c0002t0051 a0002c0002t0054 a0002c0002t0058 a0002c0002t0059 a0002c0002t0060 a0002c0002t0062 a0002c0002t0063 a0002c0002t0064 a0002c0002t0065 a0002c0002t0066 a0002c0002t0067 a0002c0002t0069 a0002c0002t0070 a0002c0002t0071 a0002c0002t0072 a0002c0002t0073 a0002c0002t0074 a0002c0012t0057 a0002c0013t0004 a0004c0006t0029 a0004c0006t0075	a0001c0001t0020g0375 a0001c0001t0048g0271 a0001c0001t0049g0292 others(91): Show a0001c0001t0020g0375 a0001c0001t0048g0271 a0001c0001t0049g0292 a0001c0001t0052g0374 a0001c0001t0053g0338 a0001c0001t0055g0326 a0001c0001t0056g0296 a0001c0001t0061g0036 a0001c0011t0068g0380 a0002c0002t0004g0297 a0002c0002t0004g0298 a0002c0002t0004g0299 a0002c0002t0004g0300 a0002c0002t0004g0301 a0002c0002t0004g0302 a0002c0002t0004g0306 a0002c0002t0004g0311 a0002c0002t0004g0312 a0002c0002t0004g0314 a0002c0002t0004g0316 a0002c0002t0004g0318 a0002c0002t0004g0319 a0002c0002t0004g0320 a0002c0002t0004g0330 a0002c0002t0004g0370 a0002c0002t0005g0003 a0002c0002t0005g0339 a0002c0002t0005g0340 a0002c0002t0005g0341 a0002c0002t0005g0346 a0002c0002t0005g0348 a0002c0002t0005g0349 a0002c0002t0005g0350 a0002c0002t0005g0353 a0002c0002t0005g0364 a0002c0002t0005g0365 a0002c0002t0005g0366 a0002c0002t0005g0367 a0002c0002t0005g0371 a0002c0002t0009g0291 a0002c0002t0009g0347 a0002c0002t0009g0351 a0002c0002t0009g0355 a0002c0002t0009g0356 a0002c0002t0009g0357 a0002c0002t0009g0358 a0002c0002t0009g0360 a0002c0002t0009g0361 a0002c0002t0014g0332 a0002c0002t0014g0333 a0002c0002t0014g0334 a0002c0002t0014g0335 a0002c0002t0014g0336 a0002c0002t0014g0337 a0002c0002t0020g0309 a0002c0002t0020g0310 a0002c0002t0021g0376 a0002c0002t0021g0377 a0002c0002t0021g0378 a0002c0002t0022g0305 a0002c0002t0022g0317 a0002c0002t0022g0321 a0002c0002t0023g0307 a0002c0002t0023g0313 a0002c0002t0023g0329 a0002c0002t0028g0343 a0002c0002t0028g0354 a0002c0002t0030g0315 a0002c0002t0030g0322 a0002c0002t0031g0324 a0002c0002t0031g0325 a0002c0002t0050g0323 a0002c0002t0051g0342 a0002c0002t0054g0344 a0002c0002t0058g0308 a0002c0002t0059g0352 a0002c0002t0060g0359 a0002c0002t0062g0381 a0002c0002t0063g0304 a0002c0002t0064g0379 a0002c0002t0065g0369 a0002c0002t0066g0303 a0002c0002t0067g0327 a0002c0002t0069g0331 a0002c0002t0070g0345 a0002c0002t0071g0362 a0002c0002t0072g0363 a0002c0002t0073g0372 a0002c0002t0074g0373 a0002c0012t0057g0368 a0002c0013t0004g0328 a0004c0006t0029g0265 a0004c0006t0029g0266 a0004c0006t0075g0264	95	384	0.2474	c.-24 others(3): Show c.-24T>G	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	1/10	chr18	TogoVar
LIPI_chr21_14103813_14215955	14210899	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(21): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00558.hp1 HG01074.hp2 HG01099.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG02056.hp2 HG02080.hp1 HG02523.hp1 HG02559.hp1 HG02683.hp2 HG03834.hp1 HG03927.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 NA18973.hp2 NA18980.hp1 NA19001.hp1 NA19066.hp2 NA19078.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0010	a0001c0008 a0001c0014 a0002c0007 others(3): Show a0001c0008 a0001c0014 a0002c0007 a0003c0005 a0004c0021 a0010c0015	a0001c0008t0005 a0001c0014t0005 a0002c0007t0004 others(5): Show a0001c0008t0005 a0001c0014t0005 a0002c0007t0004 a0002c0007t0007 a0002c0007t0011 a0003c0005t0007 a0004c0021t0005 a0010c0015t0007	a0001c0008t0005g0333 a0001c0008t0005g0341 a0001c0008t0005g0342 others(21): Show a0001c0008t0005g0333 a0001c0008t0005g0341 a0001c0008t0005g0342 a0001c0014t0005g0327 a0002c0007t0004g0324 a0002c0007t0004g0325 a0002c0007t0004g0328 a0002c0007t0004g0330 a0002c0007t0004g0332 a0002c0007t0004g0334 a0002c0007t0004g0335 a0002c0007t0004g0336 a0002c0007t0004g0337 a0002c0007t0004g0338 a0002c0007t0004g0339 a0002c0007t0004g0340 a0002c0007t0004g0343 a0002c0007t0004g0344 a0002c0007t0007g0326 a0002c0007t0007g0331 a0002c0007t0011g0329 a0003c0005t0007g0322 a0004c0021t0005g0323 a0010c0015t0007g0345	24	362	0.0663	c.-54 others(3): Show c.-54C>T	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding	1/10	chr21	TogoVar
LIPT1_chr2_99149967_99168137	99155036	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0085 a0001c0002t0002g0085	1	406	0.0025	c.-17 others(3): Show c.-17C>T	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/2	chr2	TogoVar
LITAFD_chr16_8877351_8890350	8882386	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0002 a0001c0001t0006g0002	1	406	0.0025	c.-23 others(4): Show c.-235C>T	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	1/4	chr16	TogoVar

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