regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLAIN1_chr13_77692687_77769229 | 77698132 | T | TGG | frameshift_variant | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(296): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(279): Show | 299 | 300 | 0.9967 | 2 | c.220 others(9): Show |
p.Leu others(4): Show |
SLAIN1 | ENSG00000139737.23 | transcript | ENST00000418532.6 | protein_coding | 1/7 | 449/3009 | 222/1773 | 74/590 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |
SLAIN1_chr13_77692687_77769229 | 77698141 | G | GC | frameshift_variant | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(296): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(279): Show | 299 | 300 | 0.9967 | 1 | c.230 others(4): Show |
p.Leu others(4): Show |
SLAIN1 | ENSG00000139737.23 | transcript | ENST00000418532.6 | protein_coding | 1/7 | 458/3009 | 231/1773 | 77/590 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |
SLC11A1_chr2_218377273_218401894 | 218391401 | G | GC | frameshift_variant | HIGH | HG01192.hp1 HG01496.hp1 HG01978.hp1 others(8): Show |
a0003 | a0003c0009a0003c0013a0003c0015others(1): Show | a0003c0009t0001a0003c0013t0004a0003c0013t0007others(2): Show | a0003c0009t0001g0001a0003c0009t0001g0012a0003c0009t0001g0135others(5): Show | 11 | 376 | 0.0293 | 1 | c.107 others(5): Show |
p.Ala others(5): Show |
SLC11A1 | ENSG00000018280.17 | transcript | ENST00000233202.11 | protein_coding | 11/15 | 1171/3608 | 1075/1653 | 359/550 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63083303 | G | A | stop_gained | HIGH | HG00423.hp2 HG01074.hp2 HG02074.hp2 others(18): Show |
a0006a0015 | a0006c0006a0015c0022 | a0006c0006t0001a0015c0022t0001 | a0006c0006t0001g0269a0006c0006t0001g0311a0006c0006t0001g0316others(18): Show | 21 | 366 | 0.0574 | 0 | c.122 others(4): Show |
p.Gln others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 7/10 | 1667/2101 | 1225/1659 | 409/552 | chr11 | TogoVar | ||
SLC22A31_chr16_89190761_89205537 | 89196258 | GCCTGGCC others(74): Show |
G | frameshift_variant others(3): Show |
HIGH | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(170): Show |
a0002a0005a0006others(4): Show | a0002c0002a0002c0004a0002c0007others(9): Show | a0002c0002t0001a0002c0002t0002a0002c0004t0001others(10): Show | a0002c0002t0001g0002a0002c0002t0001g0010a0002c0002t0001g0014others(30): Show | 173 | 428 | 0.4042 | -81 | c.103 others(93): Show |
p.Arg others(5): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 9/9 | 1117/1615 | 1035/1341 | 345/446 | chr16 | TogoVar | ||
SLC25A14_chrX_130334919_130378357 | 130346566 | C | CA | frameshift_variant | HIGH | NA18974.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0093 | 1 | 291 | 0.0034 | 1 | c.196 others(4): Show |
p.Thr others(4): Show |
SLC25A14 | ENSG00000102078.16 | transcript | ENST00000545805.6 | protein_coding | 4/11 | 427/1615 | 197/978 | 66/325 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC45A1_chr1_8313114_8349165 | 8324401 | G | A | stop_gained | HIGH | NA18974.hp1 | a0003 | a0003c0011 | a0003c0011t0001 | a0003c0011t0001g0238 | 1 | 388 | 0.0026 | 0 | c.72G others(2): Show |
p.Trp others(3): Show |
SLC45A1 | ENSG00000162426.16 | transcript | ENST00000471889.7 | protein_coding | 2/9 | 169/2496 | 72/2247 | 24/748 | chr1 | TogoVar | ||
SLC45A1_chr1_8313114_8349165 | 8330930 | TCAGCAGG others(7): Show |
T | splice_donor_variant others(3): Show |
HIGH | NA18974.hp1 | a0003 | a0003c0011 | a0003c0011t0001 | a0003c0011t0001g0238 | 1 | 388 | 0.0026 | -14 | c.143 others(25): Show |
p.Gln others(13): Show |
SLC45A1 | ENSG00000162426.16 | transcript | ENST00000471889.7 | protein_coding | 5/9 | 1535/2496 | 1438/2247 | 480/748 | chr1 | TogoVar | ||
SLC9A6_chrX_135980435_136052269 | 135998169 | GT | G | frameshift_variant | HIGH | NA18974.hp1 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0118 | 1 | 199 | 0.0050 | -1 | c.433 others(4): Show |
p.Tyr others(5): Show |
SLC9A6 | ENSG00000198689.13 | transcript | ENST00000630721.3 | protein_coding | 4/18 | 532/4684 | 433/2040 | 145/679 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC9A7_chrX_46594251_46764118 | 46758707 | T | TGA | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0013 | a0007c0013t0046 | a0007c0013t0046g0249 | 1 | 250 | 0.0040 | 2 | c.322 others(9): Show |
p.Tyr others(5): Show |
SLC9A7 | ENSG00000065923.10 | transcript | ENST00000616978.5 | protein_coding | 1/17 | 411/9971 | 322/2181 | 108/726 | chrX | TogoVar | ||
SLC9A7_chrX_46594251_46764118 | 46758893 | G | GC | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0013 | a0007c0013t0046 | a0007c0013t0046g0249 | 1 | 250 | 0.0040 | 1 | c.136 others(4): Show |
p.Ala others(4): Show |
SLC9A7 | ENSG00000065923.10 | transcript | ENST00000616978.5 | protein_coding | 1/17 | 225/9971 | 136/2181 | 46/726 | chrX | TogoVar | ||
SLFN13_chr17_35430096_35453766 | 35445639 | G | T | stop_gained | HIGH | HG00099.hp1 HG00140.hp2 HG00408.hp1 others(56): Show |
a0002 | a0002c0002a0002c0014a0002c0023others(6): Show | a0002c0002t0003a0002c0002t0004a0002c0002t0011others(17): Show | a0002c0002t0003g0003a0002c0002t0003g0022a0002c0002t0003g0060others(25): Show | 59 | 456 | 0.1294 | 0 | c.42C others(2): Show |
p.Tyr others(3): Show |
SLFN13 | ENSG00000154760.14 | transcript | ENST00000285013.11 | protein_coding | 3/6 | 247/8398 | 42/2694 | 14/897 | chr17 | TogoVar | ||
SLFNL1_chr1_41010597_41026725 | 41017902 | A | AC | frameshift_variant | HIGH | HG00544.hp2 HG00673.hp1 HG00673.hp2 others(57): Show |
a0002a0005a0007others(3): Show | a0002c0002a0002c0022a0005c0007others(6): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(11): Show | a0002c0002t0001g0007a0002c0002t0001g0022a0002c0002t0001g0029others(24): Show | 60 | 430 | 0.1395 | 1 | c.689 others(4): Show |
p.Ser others(5): Show |
SLFNL1 | ENSG00000171790.16 | transcript | ENST00000302946.13 | protein_coding | 4/6 | 917/1961 | 689/1224 | 230/407 | chr1 | TogoVar | ||
SMARCA1_chrX_129441506_129528490 | 129518383 | TC | T | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0004 | a0007c0004t0001 | a0007c0004t0001g0112 | 1 | 279 | 0.0036 | -1 | c.238 others(4): Show |
p.Asp others(4): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 2/25 | 358/3989 | 238/3213 | 80/1070 | chrX | TogoVar | ||
SON_chr21_33538038_33582481 | 33576378 | G | GA | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | 1 | c.723 others(5): Show |
p.Ala others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7292/8393 | 7237/7281 | 2413/2426 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |
SON_chr21_33538038_33582481 | 33576390 | GA | G | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | -1 | c.724 others(5): Show |
p.Arg others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7303/8393 | 7248/7281 | 2416/2426 | chr21 | TogoVar | ||
SPIN3_chrX_56985831_57000541 | 56994307 | A | AC | frameshift_variant | HIGH | NA18974.hp1 | a0002 | a0002c0003 | a0002c0003t0009 | a0002c0003t0009g0010 | 1 | 318 | 0.0031 | 1 | c.640 others(4): Show |
p.Val others(5): Show |
SPIN3 | ENSG00000204271.13 | transcript | ENST00000374919.6 | protein_coding | 2/2 | 968/4445 | 640/777 | 214/258 | chrX | TogoVar | ||
SPIN3_chrX_56985831_57000541 | 56994618 | A | AG | frameshift_variant | HIGH | NA18974.hp1 | a0002 | a0002c0003 | a0002c0003t0009 | a0002c0003t0009g0010 | 1 | 318 | 0.0031 | 1 | c.329 others(8): Show |
p.Pro others(5): Show |
SPIN3 | ENSG00000204271.13 | transcript | ENST00000374919.6 | protein_coding | 2/2 | 657/4445 | 329/777 | 110/258 | chrX | TogoVar | ||
SPIN3_chrX_56985831_57000541 | 56995214 | A | AC | splice_donor_variant others(1): Show |
HIGH | NA18974.hp1 | a0002 | a0002c0003 | a0002c0003t0009 | a0002c0003t0009g0010 | 1 | 318 | 0.0031 | 1 | c.-3+ others(5): Show |
SPIN3 | ENSG00000204271.13 | transcript | ENST00000374919.6 | protein_coding | 1/1 | chrX | TogoVar | ||||||
SURF2_chr9_133351550_133366158 | 133357790 | C | CG | frameshift_variant | HIGH | HG00741.hp1 HG01106.hp2 HG01496.hp1 others(12): Show |
a0003a0007 | a0003c0003a0003c0008a0007c0014 | a0003c0003t0001a0003c0008t0001a0007c0014t0001 | a0003c0003t0001g0001a0003c0003t0001g0004a0003c0003t0001g0043others(2): Show | 15 | 448 | 0.0335 | 1 | c.315 others(4): Show |
p.Tyr others(5): Show |
SURF2 | ENSG00000148291.10 | transcript | ENST00000371964.5 | protein_coding | 3/6 | 359/833 | 316/771 | 106/256 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |
SYAP1_chrX_16714612_16770340 | 16741736 | G | GT | frameshift_variant others(1): Show |
HIGH | NA18974.hp1 | a0003 | a0003c0004 | a0003c0004t0035 | a0003c0004t0035g0254 | 1 | 290 | 0.0035 | 1 | c.384 others(4): Show |
p.Asp others(5): Show |
SYAP1 | ENSG00000169895.6 | transcript | ENST00000380155.4 | protein_coding | 4/9 | 498/6153 | 385/1059 | 129/352 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SYN1_chrX_47566901_47624857 | 47574695 | T | TG | frameshift_variant | HIGH | NA18974.hp1 NA19030.hp1 |
a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0060a0003c0005t0001g0202 | 2 | 282 | 0.0071 | 1 | c.138 others(5): Show |
p.Pro others(5): Show |
SYN1 | ENSG00000008056.14 | transcript | ENST00000295987.13 | protein_coding | 11/13 | 1514/3210 | 1385/2118 | 462/705 | chrX | TogoVar | ||
TAAR2_chr6_132612150_132629275 | 132617703 | C | T | stop_gained | HIGH | HG00408.hp2 HG00544.hp2 HG00558.hp1 others(24): Show |
a0002 | a0002c0003a0002c0008 | a0002c0003t0000a0002c0008t0000 | a0002c0003t0000g0004a0002c0003t0000g0029a0002c0003t0000g0056others(9): Show | 27 | 452 | 0.0597 | 0 | c.503 others(3): Show |
p.Trp others(4): Show |
TAAR2 | ENSG00000146378.6 | transcript | ENST00000367931.1 | protein_coding | 2/2 | 503/1056 | 503/1056 | 168/351 | chr6 | TogoVar | ||
TAP2_chr6_32820415_32843739 | 32828908 | A | G | stop_lost | HIGH | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(156): Show |
a0000 | a0000c0002a0000c0006a0000c0008others(19): Show | a0000c0002t0001a0000c0002t0003a0000c0002t0025others(28): Show | a0000c0002t0001g0001a0000c0002t0001g0037a0000c0002t0001g0040others(70): Show | 159 | 485 | 0.3278 | 0 | c.205 others(4): Show |
p.Ter others(11): Show |
TAP2 | ENSG00000204267.19 | transcript | ENST00000374897.4 | protein_coding | 12/12 | 2150/5643 | 2059/2061 | 687/686 | chr6 | TogoVar | ||
TCP11X2_chrX_102455315_102476812 | 102460565 | T | TC | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0009 | a0007c0009t0002 | a0007c0009t0002g0069 | 1 | 137 | 0.0073 | 1 | c.145 others(10): Show |
p.Lys others(5): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 10/10 | 1507/1758 | 1456/1509 | 486/502 | chrX | TogoVar | ||
TCP11X2_chrX_102455315_102476812 | 102460651 | C | CT | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0009 | a0007c0009t0002 | a0007c0009t0002g0069 | 1 | 137 | 0.0073 | 1 | c.137 others(5): Show |
p.Glu others(5): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 10/10 | 1421/1758 | 1370/1509 | 457/502 | chrX | TogoVar | ||
TCP11X2_chrX_102455315_102476812 | 102462866 | AG | A | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0009 | a0007c0009t0002 | a0007c0009t0002g0069 | 1 | 137 | 0.0073 | -1 | c.109 others(5): Show |
p.Leu others(5): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 8/10 | 1141/1758 | 1090/1509 | 364/502 | chrX | TogoVar | ||
TCP11X2_chrX_102455315_102476812 | 102463199 | TG | T | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0009 | a0007c0009t0002 | a0007c0009t0002g0069 | 1 | 137 | 0.0073 | -1 | c.855 others(4): Show |
p.Ser others(5): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 7/10 | 906/1758 | 855/1509 | 285/502 | chrX | TogoVar | ||
TCP11X2_chrX_102455315_102476812 | 102463654 | AG | A | frameshift_variant | HIGH | NA18974.hp1 | a0007 | a0007c0009 | a0007c0009t0002 | a0007c0009t0002g0069 | 1 | 137 | 0.0073 | -1 | c.646 others(4): Show |
p.Leu others(5): Show |
TCP11X2 | ENSG00000215029.12 | transcript | ENST00000642911.3 | protein_coding | 6/10 | 697/1758 | 646/1509 | 216/502 | chrX | TogoVar | ||
TDRD12_chr19_32714767_32834580 | 32826678 | AAC | A | splice_acceptor_variant others(2): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00558.hp1 others(112): Show |
a0002a0003a0005others(6): Show | a0002c0003a0002c0010a0003c0002others(7): Show | a0002c0003t0001a0002c0003t0011a0002c0003t0033others(20): Show | a0002c0003t0001g0002a0002c0003t0001g0003a0002c0003t0001g0174others(110): Show | 115 | 380 | 0.3026 | -2 | c.382 others(15): Show |
TDRD12 | ENSG00000173809.18 | transcript | ENST00000639142.2 | protein_coding | 31/32 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMLHE_chrX_155484011_155617952 | 155492358 | C | CT | frameshift_variant others(1): Show |
HIGH | NA18974.hp1 | a0003 | a0003c0005 | a0003c0005t0052 | a0003c0005t0052g0200 | 1 | 216 | 0.0046 | 1 | c.113 others(5): Show |
p.Arg others(5): Show |
TMLHE | ENSG00000185973.12 | transcript | ENST00000334398.8 | protein_coding | 7/8 | 1294/3952 | 1132/1266 | 378/421 | chrX | TogoVar | ||
TMLHE_chrX_155484011_155617952 | 155492412 | G | GT | frameshift_variant | HIGH | NA18974.hp1 | a0003 | a0003c0005 | a0003c0005t0052 | a0003c0005t0052g0200 | 1 | 216 | 0.0046 | 1 | c.107 others(5): Show |
p.Thr others(5): Show |
TMLHE | ENSG00000185973.12 | transcript | ENST00000334398.8 | protein_coding | 7/8 | 1240/3952 | 1078/1266 | 360/421 | chrX | TogoVar | ||
TMPRSS11A_chr4_67904395_67968493 | 67963391 | C | T | start_lost | HIGH | HG00280.hp2 HG00323.hp1 HG00544.hp1 others(97): Show |
a0002a0003a0005others(1): Show | a0002c0002a0002c0015a0002c0018others(7): Show | a0002c0002t0002a0002c0002t0011a0002c0002t0019others(13): Show | a0002c0002t0002g0001a0002c0002t0002g0002a0002c0002t0002g0005others(79): Show | 100 | 394 | 0.2538 | 0 | c.3G> others(1): Show |
p.Met others(2): Show |
TMPRSS11A | ENSG00000187054.16 | transcript | ENST00000508048.6 | protein_coding | 1/10 | 103/3304 | 3/1257 | 1/418 | chr4 | TogoVar | ||
TNK1_chr17_7376089_7394742 | 7387376 | A | G | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp2 HG00323.hp2 HG00438.hp2 others(53): Show |
a0001a0003a0009others(3): Show | a0001c0001a0001c0002a0001c0031others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0031t0001others(5): Show | a0001c0001t0001g0001a0001c0001t0001g0043a0001c0001t0001g0048others(15): Show | 56 | 452 | 0.1239 | 0 | c.139 others(6): Show |
TNK1 | ENSG00000174292.13 | transcript | ENST00000688331.1 | protein_coding | 9/12 | chr17 | TogoVar | ||||||
TRIM48_chr11_55257155_55276114 | 55264123 | AATTACAC others(6934): Show |
A | exon_loss_variant | HIGH | NA18941.hp1 NA18943.hp2 NA18963.hp2 others(6): Show |
a0000 | a0000c0004 | a0000c0004t0005a0000c0004t0006 | a0000c0004t0005g0007a0000c0004t0006g0007 | 9 | 272 | 0.0331 | -6941 | c.45- others(11): Show |
TRIM48 | ENSG00000150244.12 | transcript | ENST00000417545.5 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
TRIM51G_chr11_48970498_48988885 | 48978871 | C | G | splice_donor_variant others(1): Show |
HIGH | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(271): Show |
a0001a0003a0005others(5): Show | a0001c0001a0001c0006a0001c0011others(7): Show | a0001c0001t0001a0001c0001t0004a0001c0006t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(74): Show | 274 | 424 | 0.6462 | 0 | c.738 others(5): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/6 | chr11 | TogoVar | ||||||
TRIM51G_chr11_48970498_48988885 | 48979006 | G | A | stop_gained | HIGH | HG00099.hp1 HG00408.hp1 HG00438.hp1 others(136): Show |
a0002a0012a0013 | a0002c0002a0002c0004a0002c0015others(3): Show | a0002c0002t0002a0002c0004t0002a0002c0015t0002others(3): Show | a0002c0002t0002g0005a0002c0002t0002g0007a0002c0002t0002g0009others(58): Show | 139 | 424 | 0.3278 | 0 | c.604 others(3): Show |
p.Gln others(4): Show |
TRIM51G | ENSG00000220948.6 | transcript | ENST00000534741.3 | protein_coding | 4/7 | 755/1510 | 604/1359 | 202/452 | chr11 | TogoVar | ||
TTC24_chr1_156574723_156592719 | 156583439 | GC | G | frameshift_variant | HIGH | HG00741.hp2 HG01123.hp1 HG01168.hp1 others(23): Show |
a0003a0009a0010 | a0003c0004a0009c0010a0010c0011 | a0003c0004t0001a0003c0004t0006a0003c0004t0012others(2): Show | a0003c0004t0001g0006a0003c0004t0001g0017a0003c0004t0001g0024others(9): Show | 26 | 442 | 0.0588 | -1 | c.114 others(5): Show |
p.Gln others(5): Show |
TTC24 | ENSG00000187862.13 | transcript | ENST00000368236.8 | protein_coding | 5/11 | 1184/2958 | 1144/1749 | 382/582 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
TUBA3C_chr13_19168772_19186824 | 19173946 | CCTCGCGG others(765): Show |
C | splice_acceptor_variant others(3): Show |
HIGH | HG00673.hp2 HG02015.hp1 NA18974.hp1 others(7): Show |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0016a0002c0003t0001g0126a0002c0003t0001g0128others(4): Show | 10 | 448 | 0.0223 | -772 | c.105 others(13): Show |
p.Val others(13): Show |
TUBA3C | ENSG00000198033.13 | transcript | ENST00000400113.8 | protein_coding | 5/5 | 1346/1521 | 1057/1353 | 353/450 | chr13 | TogoVar | ||
UBA1_chrX_47188829_47220128 | 47199105 | C | CT | splice_donor_variant others(1): Show |
HIGH | NA18974.hp1 | a0006 | a0006c0022 | a0006c0022t0001 | a0006c0022t0001g0122 | 1 | 281 | 0.0036 | 1 | c.176 others(4): Show |
UBA1 | ENSG00000130985.17 | transcript | ENST00000335972.11 | protein_coding | 3/25 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
UBA1_chrX_47188829_47220128 | 47199253 | G | GT | frameshift_variant | HIGH | NA18974.hp1 | a0006 | a0006c0022 | a0006c0022t0001 | a0006c0022t0001g0122 | 1 | 281 | 0.0036 | 1 | c.222 others(4): Show |
p.Val others(4): Show |
UBA1 | ENSG00000130985.17 | transcript | ENST00000335972.11 | protein_coding | 4/26 | 419/3572 | 223/3177 | 75/1058 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
UBTFL1_chr11_90080950_90092131 | 90086720 | C | CT | frameshift_variant | HIGH | HG00323.hp1 HG00597.hp1 HG00639.hp2 others(62): Show |
a0002a0003a0005others(1): Show | a0002c0002a0003c0003a0005c0005others(1): Show | a0002c0002t0000a0003c0003t0000a0005c0005t0000others(1): Show | a0002c0002t0000g0000a0003c0003t0000g0000a0005c0005t0000g0000others(1): Show | 65 | 276 | 0.2355 | 1 | c.772 others(4): Show |
p.Trp others(5): Show |
UBTFL1 | ENSG00000255009.4 | transcript | ENST00000530464.2 | protein_coding | 1/1 | 773/1182 | 773/1182 | 258/393 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |
UNC93A_chr6_167286315_167321014 | 167296214 | G | A | stop_gained | HIGH | HG00408.hp2 HG00438.hp1 HG00544.hp2 others(51): Show |
a0004 | a0004c0004a0004c0008a0004c0011others(4): Show | a0004c0004t0003a0004c0004t0006a0004c0008t0001others(6): Show | a0004c0004t0003g0005a0004c0004t0003g0010a0004c0004t0003g0028others(43): Show | 54 | 448 | 0.1205 | 0 | c.452 others(3): Show |
p.Trp others(4): Show |
UNC93A | ENSG00000112494.10 | transcript | ENST00000230256.8 | protein_coding | 3/8 | 627/2111 | 452/1374 | 151/457 | chr6 | TogoVar | ||
UNKL_chr16_1358205_1419704 | 1397263 | TCCCCGTG others(167): Show |
T | frameshift_variant others(3): Show |
HIGH | NA18942.hp2 NA18974.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0067a0002c0002t0001g0160 | 2 | 322 | 0.0062 | -174 | c.735 others(11): Show |
p.Ser others(5): Show |
UNKL | ENSG00000059145.19 | transcript | ENST00000389221.9 | protein_coding | 6/15 | 779/5250 | 735/2202 | 245/733 | chr16 | TogoVar | ||
USP29_chr19_57114985_57136926 | 57131414 | C | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(404): Show |
a0001a0002a0003others(15): Show | a0001c0001a0001c0003a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0013others(35): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(223): Show | 407 | 416 | 0.9784 | 0 | c.273 others(4): Show |
p.Tyr others(4): Show |
USP29 | ENSG00000131864.11 | transcript | ENST00000254181.9 | protein_coding | 4/4 | 3251/3763 | 2739/2769 | 913/922 | chr19 | TogoVar | ||
USP51_chrX_55479616_55494848 | 55488871 | TC | T | frameshift_variant | HIGH | NA18974.hp1 | a0004 | a0004c0004 | a0004c0004t0013 | a0004c0004t0013g0039 | 1 | 296 | 0.0034 | -1 | c.68d others(3): Show |
p.Gly others(4): Show |
USP51 | ENSG00000247746.5 | transcript | ENST00000500968.4 | protein_coding | 3/3 | 387/4643 | 68/2136 | 23/711 | chrX | TogoVar | ||
VEGFB_chr11_64229584_64244264 | 64237191 | A | T | stop_gained | HIGH | NA18974.hp1 | a0007 | a0007c0007 | a0007c0007t0001 | a0007c0007t0001g0042 | 1 | 328 | 0.0031 | 0 | c.379 others(3): Show |
p.Lys others(4): Show |
VEGFB | ENSG00000173511.10 | transcript | ENST00000309422.7 | protein_coding | 5/7 | 629/1805 | 379/624 | 127/207 | chr11 | TogoVar | ||
VEGFD_chrX_15340596_15389413 | 15353087 | A | AT | frameshift_variant | HIGH | NA18974.hp1 | a0004 | a0004c0007 | a0004c0007t0002 | a0004c0007t0002g0256 | 1 | 302 | 0.0033 | 1 | c.722 others(4): Show |
p.Asn others(5): Show |
VEGFD | ENSG00000165197.5 | transcript | ENST00000297904.4 | protein_coding | 5/7 | 1189/2069 | 722/1065 | 241/354 | chrX | TogoVar | ||
VEGFD_chrX_15340596_15389413 | 15358136 | AC | A | frameshift_variant | HIGH | NA18974.hp1 | a0004 | a0004c0007 | a0004c0007t0002 | a0004c0007t0002g0256 | 1 | 302 | 0.0033 | -1 | c.358 others(4): Show |
p.Val others(5): Show |
VEGFD | ENSG00000165197.5 | transcript | ENST00000297904.4 | protein_coding | 3/7 | 825/2069 | 358/1065 | 120/354 | chrX | TogoVar |