regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PPP1R3F_chrX_49264793_49293090 | 49287047 | T | TC | frameshift_variant | HIGH | NA19076.hp1 | a0011 | a0011c0015 | a0011c0015t0011 | a0011c0015t0011g0051 | 1 | 288 | 0.0035 | 1 | c.235 others(5): Show |
p.Leu others(5): Show |
PPP1R3F | ENSG00000049769.14 | transcript | ENST00000055335.11 | protein_coding | 4/4 | 2437/3477 | 2360/2400 | 787/799 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRAMEF2_chr1_12852086_12866909 | 12860036 | G | T | stop_gained | HIGH | HG00642.hp2 HG01515.hp2 HG02071.hp1 others(25): Show |
a0002a0014 | a0002c0002a0002c0022a0002c0023others(1): Show | a0002c0002t0003a0002c0022t0003a0002c0023t0008others(1): Show | a0002c0002t0003g0005a0002c0002t0003g0022a0002c0002t0003g0023others(3): Show | 28 | 338 | 0.0828 | 0 | c.631 others(3): Show |
p.Glu others(4): Show |
PRAMEF2 | ENSG00000120952.4 | transcript | ENST00000240189.2 | protein_coding | 3/4 | 718/1642 | 631/1425 | 211/474 | chr1 | TogoVar | ||
PRAMEF5_chr1_13249198_13268435 | 13262963 | G | A | stop_gained | HIGH | NA19076.hp1 | a0020 | a0020c0021 | a0020c0021t0004 | a0020c0021t0004g0014 | 1 | 142 | 0.0070 | 0 | c.128 others(4): Show |
p.Trp others(4): Show |
PRAMEF5 | ENSG00000270601.5 | transcript | ENST00000622421.3 | protein_coding | 4/4 | 1383/1855 | 1283/1431 | 428/476 | chr1 | TogoVar | ||
PRB3_chr12_11260914_11274707 | 11267400 | A | AG | frameshift_variant | HIGH | HG00544.hp1 HG00597.hp1 HG00597.hp2 others(77): Show |
a0003a0005a0007others(9): Show | a0003c0003a0005c0005a0007c0006others(9): Show | a0003c0003t0002a0005c0005t0002a0007c0006t0002others(9): Show | a0003c0003t0002g0004a0003c0003t0002g0023a0003c0003t0002g0033others(14): Show | 80 | 443 | 0.1806 | 1 | c.848 others(4): Show |
p.His others(5): Show |
PRB3 | ENSG00000197870.14 | transcript | ENST00000538488.3 | protein_coding | 3/4 | 886/1227 | 848/1056 | 283/351 | chr12 | TogoVar | ||
PRDM9_chr5_23502609_23533093 | 23526364 | C | T | stop_gained | HIGH | NA19076.hp1 | a0022 | a0022c0054 | a0022c0054t0002 | a0022c0054t0002g0111 | 1 | 424 | 0.0024 | 0 | c.127 others(4): Show |
p.Gln others(4): Show |
PRDM9 | ENSG00000164256.11 | transcript | ENST00000296682.4 | protein_coding | 11/11 | 1464/3193 | 1276/2685 | 426/894 | chr5 | TogoVar | ||
PRDX4_chrX_23662493_23691397 | 23686296 | TC | T | frameshift_variant | HIGH | NA19076.hp1 | a0004 | a0004c0006 | a0004c0006t0004 | a0004c0006t0004g0089 | 1 | 349 | 0.0029 | -1 | c.779 others(4): Show |
p.Pro others(5): Show |
PRDX4 | ENSG00000123131.13 | transcript | ENST00000379341.9 | protein_coding | 7/7 | 857/956 | 779/816 | 260/271 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PROKR1_chr2_68638579_68663251 | 68655228 | C | CCGCAGGA others(10): Show |
frameshift_variant | HIGH | NA19076.hp1 | a0007 | a0007c0009 | a0007c0009t0016 | a0007c0009t0016g0161 | 1 | 442 | 0.0023 | 17 | c.835 others(24): Show |
p.Val others(5): Show |
PROKR1 | ENSG00000169618.7 | transcript | ENST00000303786.5 | protein_coding | 3/3 | 1282/4287 | 852/1182 | 284/393 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
PRPF3_chr1_150316533_150358233 | 150324880 | C | CTTTT | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(303): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(297): Show | 306 | 362 | 0.8453 | 4 | c.-48 others(15): Show |
PRPF3 | ENSG00000117360.13 | transcript | ENST00000324862.7 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PRPS1_chrX_107623510_107656026 | 107647625 | AC | A | frameshift_variant | HIGH | NA19076.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0096 | 1 | 245 | 0.0041 | -1 | c.726 others(4): Show |
p.Arg others(5): Show |
PRPS1 | ENSG00000147224.13 | transcript | ENST00000372435.10 | protein_coding | 6/7 | 845/2070 | 726/957 | 242/318 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRPS1_chrX_107623510_107656026 | 107647726 | A | AC | frameshift_variant | HIGH | NA19076.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0096 | 1 | 245 | 0.0041 | 1 | c.827 others(4): Show |
p.Gln others(5): Show |
PRPS1 | ENSG00000147224.13 | transcript | ENST00000372435.10 | protein_coding | 6/7 | 947/2070 | 828/957 | 276/318 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRPS1_chrX_107623510_107656026 | 107649976 | AG | A | frameshift_variant | HIGH | NA19076.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0096 | 1 | 245 | 0.0041 | -1 | c.903 others(4): Show |
p.Arg others(5): Show |
PRPS1 | ENSG00000147224.13 | transcript | ENST00000372435.10 | protein_coding | 7/7 | 1022/2070 | 903/957 | 301/318 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151279866 | G | GCAGGT | frameshift_variant | HIGH | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(87): Show |
a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0002a0002c0004t0001g0012a0002c0004t0001g0013others(21): Show | 90 | 428 | 0.2103 | 5 | c.127 others(12): Show |
p.Ser others(4): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 2/5 | 144/1408 | 132/987 | 44/328 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |
PRSS48_chr4_151272161_151296862 | 151291451 | T | G | stop_lost | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0000a0002 | a0000c0001a0000c0002a0000c0005others(4): Show | a0000c0001t0002a0000c0001t0004a0000c0001t0005others(6): Show | a0000c0001t0002g0001a0000c0001t0002g0008a0000c0001t0002g0010others(100): Show | 325 | 428 | 0.7594 | 0 | c.985 others(3): Show |
p.Ter others(11): Show |
PRSS48 | ENSG00000189099.12 | transcript | ENST00000455694.7 | protein_coding | 5/5 | 997/1408 | 985/987 | 329/328 | chr4 | TogoVar | ||
PSG7_chr19_42919132_42942207 | 42935542 | G | A | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(373): Show |
a0001a0005a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(32): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0006others(319): Show | 376 | 416 | 0.9039 | 0 | c.292 others(3): Show |
p.Arg others(3): Show |
PSG7 | ENSG00000221878.13 | transcript | ENST00000406070.7 | protein_coding | 2/6 | 423/2067 | 292/1260 | 98/419 | chr19 | TogoVar | ||
PTCD3_chr2_86101235_86147157 | 86111112 | G | A | splice_acceptor_variant others(1): Show |
HIGH | NA19076.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0237 | 1 | 398 | 0.0025 | 0 | c.195 others(5): Show |
PTCD3 | ENSG00000132300.19 | transcript | ENST00000254630.12 | protein_coding | 3/23 | chr2 | TogoVar | ||||||
PTPRQ_chr12_80439235_80685273 | 80484408 | T | TTTTC | splice_acceptor_variant others(1): Show |
HIGH | HG00438.hp1 HG01074.hp2 HG01192.hp2 others(31): Show |
a0003a0005a0009others(14): Show | a0003c0003a0003c0079a0005c0004others(16): Show | a0003c0003t0001a0003c0003t0002a0003c0079t0001others(20): Show | a0003c0003t0001g0105a0003c0003t0001g0107a0003c0003t0002g0104others(31): Show | 34 | 178 | 0.1910 | 4 | c.118 others(17): Show |
PTPRQ | ENSG00000139304.16 | transcript | ENST00000644991.3 | protein_coding | 8/44 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PTTG1IP2_chr7_90464639_90518397 | 90487326 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG00408.hp2 HG00423.hp2 HG00438.hp2 others(69): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0003c0005t0001 | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0235others(58): Show | 72 | 384 | 0.1875 | 0 | c.193 others(5): Show |
PTTG1IP2 | ENSG00000251154.2 | transcript | ENST00000509356.2 | protein_coding | 2/6 | chr7 | TogoVar | ||||||
PYGL_chr14_50900217_50949483 | 50911872 | CT | C | splice_acceptor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00408.hp1 others(250): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(18): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0002g0010a0001c0001t0002g0100a0001c0001t0002g0114others(188): Show | 253 | 390 | 0.6487 | -1 | c.182 others(7): Show |
PYGL | ENSG00000100504.17 | transcript | ENST00000216392.8 | protein_coding | 15/19 | chr14 | TogoVar | ||||||
RAB24_chr5_177296198_177308719 | 177301954 | A | ACGTAATC others(13): Show |
frameshift_variant | HIGH | NA19076.hp1 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0031 | 1 | 404 | 0.0025 | 20 | c.498 others(27): Show |
p.Val others(5): Show |
RAB24 | ENSG00000169228.14 | transcript | ENST00000303251.11 | protein_coding | 7/8 | 948/1588 | 517/612 | 173/203 | chr5 | TogoVar | ||
RBMY1A1_chrY_21529879_21554326 | 21546475 | GA | G | frameshift_variant others(1): Show |
HIGH | NA19076.hp1 | a0018 | a0018c0010 | a0018c0010t0001 | a0018c0010t0001g0015 | 1 | 64 | 0.0156 | -1 | c.773 others(4): Show |
p.Asn others(5): Show |
RBMY1A1 | ENSG00000234414.8 | transcript | ENST00000382707.6 | protein_coding | 8/12 | 925/1921 | 773/1491 | 258/496 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
RBMY1A1_chrY_21529879_21554326 | 21548821 | A | AG | frameshift_variant | HIGH | NA19076.hp1 | a0018 | a0018c0010 | a0018c0010t0001 | a0018c0010t0001g0015 | 1 | 64 | 0.0156 | 1 | c.126 others(5): Show |
p.Ser others(5): Show |
RBMY1A1 | ENSG00000234414.8 | transcript | ENST00000382707.6 | protein_coding | 12/12 | 1418/1921 | 1266/1491 | 422/496 | INFO_REALIGN_3_PRIME | chrY | TogoVar | |
RFPL4AL1_chr19_55764118_55778420 | 55772724 | G | GCCCTGTG others(9992): Show |
stop_gained others(1): Show |
HIGH | NA19076.hp2 | a0001 | a0001c0019 | a0001c0019t0001 | a0001c0019t0001g0009 | 1 | 477 | 0.0021 | 9999 | c.515 others(10006): Show |
p.Val others(10012): Show |
RFPL4AL1 | ENSG00000229292.2 | transcript | ENST00000341750.5 | protein_coding | 3/3 | 583/1172 | 516/864 | 172/287 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |
RHBG_chr1_156364211_156390219 | 156384556 | T | TC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(229): Show |
a0002a0003a0005others(9): Show | a0002c0002a0002c0008a0003c0004others(16): Show | a0002c0002t0001a0002c0008t0001a0003c0004t0001others(16): Show | a0002c0002t0001g0003a0002c0002t0001g0011a0002c0002t0001g0014others(130): Show | 232 | 438 | 0.5297 | 1 | c.127 others(5): Show |
p.Asp others(5): Show |
RHBG | ENSG00000132677.13 | transcript | ENST00000537040.6 | protein_coding | 9/10 | 1311/1790 | 1272/1377 | 424/458 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |
RHOXF2B_chrX_120067264_120082690 | 120072651 | G | GA | frameshift_variant | HIGH | NA19076.hp1 | a0011 | a0011c0016 | a0011c0016t0005 | a0011c0016t0005g0021 | 1 | 213 | 0.0047 | 1 | c.731 others(4): Show |
p.Met others(5): Show |
RHOXF2B | ENSG00000203989.5 | transcript | ENST00000371402.5 | protein_coding | 4/4 | 869/1257 | 731/867 | 244/288 | chrX | TogoVar | ||
RIPPLY1_chrX_106895063_106908341 | 106900858 | TC | T | frameshift_variant | HIGH | NA19076.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0010 | 1 | 297 | 0.0034 | -1 | c.346 others(4): Show |
p.Glu others(5): Show |
RIPPLY1 | ENSG00000147223.6 | transcript | ENST00000276173.5 | protein_coding | 4/4 | 400/1196 | 346/456 | 116/151 | chrX | TogoVar | ||
RIPPLY1_chrX_106895063_106908341 | 106903204 | TG | T | frameshift_variant | HIGH | NA19076.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0010 | 1 | 297 | 0.0034 | -1 | c.83d others(3): Show |
p.Pro others(4): Show |
RIPPLY1 | ENSG00000147223.6 | transcript | ENST00000276173.5 | protein_coding | 1/4 | 137/1196 | 83/456 | 28/151 | chrX | TogoVar | ||
RXFP2_chr13_31734526_31808389 | 31786554 | T | TAAA | splice_acceptor_variant others(1): Show |
HIGH | HG00280.hp2 HG00544.hp1 HG00558.hp2 others(101): Show |
a0001a0006a0007 | a0001c0001a0001c0004a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(7): Show | a0001c0001t0001g0008a0001c0001t0001g0009a0001c0001t0001g0010others(101): Show | 104 | 386 | 0.2694 | 3 | c.100 others(16): Show |
RXFP2 | ENSG00000133105.8 | transcript | ENST00000298386.7 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SCART1_chr10_133448945_133474760 | 133457333 | TC | T | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp2 HG00609.hp2 others(90): Show |
a0003a0004 | a0003c0003a0003c0007a0003c0008others(16): Show | a0003c0003t0003a0003c0007t0003a0003c0008t0003others(20): Show | a0003c0003t0003g0005a0003c0003t0003g0007a0003c0003t0003g0023others(62): Show | 93 | 434 | 0.2143 | -1 | c.444 others(4): Show |
p.Glu others(5): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 3/12 | 497/4929 | 444/3084 | 148/1027 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
SCART1_chr10_133448945_133474760 | 133464740 | CTGGGGTG | C | frameshift_variant | HIGH | HG00408.hp1 HG00544.hp1 HG00544.hp2 others(99): Show |
a0003a0004a0009others(8): Show | a0003c0003a0003c0007a0003c0008others(24): Show | a0003c0003t0003a0003c0007t0003a0003c0008t0003others(28): Show | a0003c0003t0003g0005a0003c0003t0003g0007a0003c0003t0003g0023others(69): Show | 102 | 434 | 0.2350 | -7 | c.211 others(16): Show |
p.Val others(5): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 7/12 | 2170/4929 | 2117/3084 | 706/1027 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |
SCRN3_chr2_174390730_174434575 | 174427852 | TTCAAATT others(6): Show |
T | frameshift_variant | HIGH | HG00323.hp2 HG00558.hp1 HG00639.hp2 others(85): Show |
a0000 | a0000c0002a0000c0004a0000c0008 | a0000c0002t0002a0000c0002t0004a0000c0002t0012others(2): Show | a0000c0002t0002g0002a0000c0002t0002g0009a0000c0002t0002g0010others(47): Show | 88 | 364 | 0.2418 | -13 | c.125 others(22): Show |
p.Asn others(5): Show |
SCRN3 | ENSG00000144306.15 | transcript | ENST00000272732.11 | protein_coding | 8/8 | 1348/3052 | 1251/1275 | 417/424 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SEPTIN6_chrX_119611945_119698168 | 119637107 | G | GT | frameshift_variant | HIGH | NA19076.hp1 | a0003 | a0003c0004 | a0003c0004t0027 | a0003c0004t0027g0060 | 1 | 252 | 0.0040 | 1 | c.875 others(8): Show |
p.Arg others(5): Show |
SEPTIN6 | ENSG00000125354.24 | transcript | ENST00000394610.7 | protein_coding | 7/11 | 938/4495 | 875/1284 | 292/427 | chrX | TogoVar | ||
SHOX_chrX_625791_656584 | 640834 | AC | A | frameshift_variant | HIGH | NA19076.hp1 | a0002 | a0002c0005 | a0002c0005t0186 | a0002c0005t0186g0092 | 1 | 220 | 0.0046 | -1 | c.502 others(4): Show |
p.Arg others(5): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 3/5 | 609/7934 | 502/879 | 168/292 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SHOX_chrX_625791_656584 | 644479 | T | TC | frameshift_variant | HIGH | HG02135.hp1 HG03831.hp1 HG03927.hp2 others(3): Show |
a0000a0002 | a0000c0002a0002c0005 | a0000c0002t0002a0000c0002t0041a0000c0002t0077others(3): Show | a0000c0002t0002g0115a0000c0002t0041g0029a0000c0002t0077g0031others(3): Show | 6 | 220 | 0.0273 | 1 | c.728 others(4): Show |
p.Pro others(5): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 836/7934 | 729/879 | 243/292 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SIGLEC12_chr19_51486227_51506800 | 51501537 | G | GC | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(226): Show |
a0001a0003a0005others(3): Show | a0001c0002a0001c0003a0001c0010others(23): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0005others(27): Show | a0001c0002t0001g0001a0001c0002t0001g0004a0001c0002t0001g0012others(92): Show | 229 | 432 | 0.5301 | 1 | c.196 others(4): Show |
p.Ala others(4): Show |
SIGLEC12 | ENSG00000254521.7 | transcript | ENST00000291707.8 | protein_coding | 1/8 | 263/2269 | 196/1788 | 66/595 | chr19 | TogoVar | ||
SLAMF8_chr1_159821873_159842492 | 159830018 | C | T | stop_gained | HIGH | HG02080.hp2 HG02129.hp1 HG02135.hp1 others(2): Show |
a0004 | a0004c0006a0004c0015 | a0004c0006t0001a0004c0015t0017 | a0004c0006t0001g0009a0004c0006t0001g0021a0004c0006t0001g0037others(2): Show | 5 | 476 | 0.0105 | 0 | c.193 others(3): Show |
p.Arg others(3): Show |
SLAMF8 | ENSG00000158714.11 | transcript | ENST00000289707.10 | protein_coding | 2/5 | 219/3116 | 193/858 | 65/285 | chr1 | TogoVar | ||
SLC22A24_chr11_63074940_63149221 | 63081015 | A | C | stop_gained | HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0017a0002c0002others(14): Show | a0001c0001t0001a0001c0017t0001a0002c0002t0001others(16): Show | a0001c0001t0001g0096a0001c0001t0001g0097a0001c0001t0001g0098others(263): Show | 268 | 366 | 0.7322 | 0 | c.150 others(4): Show |
p.Tyr others(4): Show |
SLC22A24 | ENSG00000197658.9 | transcript | ENST00000612278.4 | protein_coding | 9/10 | 1945/2101 | 1503/1659 | 501/552 | chr11 | TogoVar | ||
SLC22A31_chr16_89190761_89205537 | 89198106 | GGGGCCCC others(11): Show |
G | splice_donor_variant others(3): Show |
HIGH | HG00408.hp1 HG00408.hp2 HG00438.hp2 others(28): Show |
a0004a0017 | a0004c0006a0004c0009a0017c0022 | a0004c0006t0001a0004c0009t0001a0017c0022t0001 | a0004c0006t0001g0006a0004c0006t0001g0029a0004c0009t0001g0008others(1): Show | 31 | 428 | 0.0724 | -18 | c.920 others(28): Show |
p.Gln others(19): Show |
SLC22A31 | ENSG00000259803.8 | transcript | ENST00000682282.1 | protein_coding | 7/9 | 920/1341 | 307/446 | chr16 | TogoVar | |||
SLC25A43_chrX_119394336_119459478 | 119399551 | C | CG | frameshift_variant | HIGH | NA19076.hp1 | a0005 | a0005c0007 | a0005c0007t0023 | a0005c0007t0023g0018 | 1 | 314 | 0.0032 | 1 | c.152 others(4): Show |
p.Pro others(4): Show |
SLC25A43 | ENSG00000077713.19 | transcript | ENST00000217909.8 | protein_coding | 1/5 | 221/2507 | 153/1026 | 51/341 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SLC25A6_chrX_1381152_1397113 | 1386633 | A | AC | frameshift_variant | HIGH | NA19076.hp1 | a0004 | a0004c0009 | a0004c0009t0011 | a0004c0009t0011g0065 | 1 | 196 | 0.0051 | 1 | c.865 others(4): Show |
p.Val others(5): Show |
SLC25A6 | ENSG00000169100.14 | transcript | ENST00000381401.11 | protein_coding | 4/4 | 969/1451 | 865/897 | 289/298 | chrX | TogoVar | ||
SLC25A6_chrX_1381152_1397113 | 1389624 | C | CT | frameshift_variant | HIGH | NA19076.hp1 | a0004 | a0004c0009 | a0004c0009t0011 | a0004c0009t0011g0065 | 1 | 196 | 0.0051 | 1 | c.214 others(4): Show |
p.Arg others(4): Show |
SLC25A6 | ENSG00000169100.14 | transcript | ENST00000381401.11 | protein_coding | 2/4 | 318/1451 | 214/897 | 72/298 | chrX | TogoVar | ||
SLFN12L_chr17_35459254_35542678 | 35479822 | AG | A | frameshift_variant | HIGH | HG00597.hp1 HG01106.hp1 HG01891.hp1 others(31): Show |
a0005 | a0005c0006a0005c0019 | a0005c0006t0005a0005c0006t0021a0005c0006t0036others(9): Show | a0005c0006t0005g0060a0005c0006t0005g0130a0005c0006t0005g0131others(31): Show | 34 | 360 | 0.0944 | -1 | c.459 others(4): Show |
p.Leu others(5): Show |
SLFN12L | ENSG00000205045.12 | transcript | ENST00000628453.4 | protein_coding | 3/5 | 1170/13219 | 459/1839 | 153/612 | chr17 | TogoVar | ||
SON_chr21_33538038_33582481 | 33576378 | G | GA | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | 1 | c.723 others(5): Show |
p.Ala others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7292/8393 | 7237/7281 | 2413/2426 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |
SON_chr21_33538038_33582481 | 33576390 | GA | G | frameshift_variant | HIGH | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(360): Show |
a0001a0002a0003others(24): Show | a0001c0001a0001c0002a0001c0009others(50): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(52): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(246): Show | 363 | 364 | 0.9973 | -1 | c.724 others(5): Show |
p.Arg others(6): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 12/12 | 7303/8393 | 7248/7281 | 2416/2426 | chr21 | TogoVar | ||
SPDYE21_chr7_67271941_67294005 | 67281505 | T | TGGGTGGC | frameshift_variant | HIGH | HG00408.hp1 HG00438.hp1 HG00558.hp1 others(128): Show |
a0002a0009a0012others(2): Show | a0002c0002a0002c0010a0009c0011others(3): Show | a0002c0002t0001a0002c0002t0009a0002c0002t0017others(6): Show | a0002c0002t0001g0001a0002c0002t0001g0003a0002c0002t0001g0004others(50): Show | 131 | 460 | 0.2848 | 7 | c.514 others(14): Show |
p.Glu others(5): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 4/9 | 1065/3286 | 521/1209 | 174/402 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
SSX1_chrX_48250392_48272444 | 48257735 | A | AT | splice_acceptor_variant others(1): Show |
HIGH | NA19076.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0129 | 1 | 339 | 0.0030 | 1 | c.70- others(5): Show |
SSX1 | ENSG00000126752.8 | transcript | ENST00000376919.4 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SSX2B_chrX_52746252_52766536 | 52753923 | TG | T | frameshift_variant | HIGH | NA19076.hp1 | a0003 | a0003c0005 | a0003c0005t0002 | a0003c0005t0002g0012 | 1 | 55 | 0.0182 | -1 | c.273 others(4): Show |
p.Asn others(4): Show |
SSX2B | ENSG00000268447.6 | transcript | ENST00000596480.6 | protein_coding | 4/8 | 360/1281 | 273/567 | 91/188 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SSX2B_chrX_52746252_52766536 | 52755841 | TC | T | frameshift_variant | HIGH | NA19076.hp1 | a0003 | a0003c0005 | a0003c0005t0002 | a0003c0005t0002g0012 | 1 | 55 | 0.0182 | -1 | c.326 others(4): Show |
p.Pro others(5): Show |
SSX2B | ENSG00000268447.6 | transcript | ENST00000596480.6 | protein_coding | 5/8 | 413/1281 | 326/567 | 109/188 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SSX2B_chrX_52746252_52766536 | 52757948 | C | CCG | frameshift_variant | HIGH | NA19076.hp1 | a0003 | a0003c0005 | a0003c0005t0002 | a0003c0005t0002g0012 | 1 | 55 | 0.0182 | 2 | c.425 others(9): Show |
p.Lys others(5): Show |
SSX2B | ENSG00000268447.6 | transcript | ENST00000596480.6 | protein_coding | 6/8 | 513/1281 | 426/567 | 142/188 | chrX | TogoVar | ||
SUV39H1_chrX_48691734_48714016 | 48698960 | CA | C | frameshift_variant | HIGH | NA19076.hp1 | a0003 | a0003c0007 | a0003c0007t0004 | a0003c0007t0004g0020 | 1 | 252 | 0.0040 | -1 | c.80d others(3): Show |
p.Lys others(4): Show |
SUV39H1 | ENSG00000101945.17 | transcript | ENST00000376687.4 | protein_coding | 2/6 | 131/2736 | 80/1239 | 27/412 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
SUV39H1_chrX_48691734_48714016 | 48700241 | A | AC | frameshift_variant | HIGH | NA19076.hp1 | a0003 | a0003c0007 | a0003c0007t0004 | a0003c0007t0004g0020 | 1 | 252 | 0.0040 | 1 | c.322 others(4): Show |
p.Arg others(5): Show |
SUV39H1 | ENSG00000101945.17 | transcript | ENST00000376687.4 | protein_coding | 3/6 | 374/2736 | 323/1239 | 108/412 | INFO_REALIGN_3_PRIME | chrX | TogoVar |