Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

Sort By

Select column to sort.

Order by

Ascending or descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
ABCA7_chr19_1035107_1070572	1038872	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp1 others(18): Show HG00673.hp1 HG00673.hp2 HG01071.hp1 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02723.hp1 HG02723.hp2 HG02970.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(11): Show a0001 a0002 a0004 a0006 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(13): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0004c0004 a0006c0020 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(13): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0004c0004t0001 a0006c0020t0002 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 others(18): Show a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0004c0004t0001g0021 a0004c0004t0001g0023 a0006c0020t0002g0020 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	21	30	0.7000	0	c.-14 others(5): Show c.-1462C>G	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	1235	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1038894	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp1 others(18): Show HG00673.hp1 HG00673.hp2 HG01071.hp1 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02723.hp1 HG02723.hp2 HG02970.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(11): Show a0001 a0002 a0004 a0006 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(13): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0004c0004 a0006c0020 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(13): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0004c0004t0001 a0006c0020t0002 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 others(18): Show a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0004c0004t0001g0021 a0004c0004t0001g0023 a0006c0020t0002g0020 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	21	30	0.7000	0	c.-14 others(5): Show c.-1440C>T	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	1213	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1038926	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02451.hp1 HG02970.hp1 HG02145.hp2 HG02451.hp1 HG02970.hp1	a0003 a0007 a0003 a0007	a0003c0005 a0007c0021 a0003c0005 a0007c0021	a0003c0005t0002 a0007c0021t0001 a0003c0005t0002 a0007c0021t0001	a0003c0005t0002g0002 a0003c0005t0002g0003 a0007c0021t0001g0001 a0003c0005t0002g0002 a0003c0005t0002g0003 a0007c0021t0001g0001	3	30	0.1000	0	c.-14 others(5): Show c.-1408G>A	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	1181	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1038996	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp1 others(19): Show HG00673.hp1 HG00673.hp2 HG01071.hp1 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02451.hp2 HG02723.hp1 HG02723.hp2 HG02970.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(12): Show a0001 a0002 a0004 a0005 a0006 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(14): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0004c0004 a0005c0022 a0006c0020 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(14): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0004c0004t0001 a0005c0022t0001 a0006c0020t0002 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 others(19): Show a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0004c0004t0001g0021 a0004c0004t0001g0023 a0005c0022t0001g0004 a0006c0020t0002g0020 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	22	30	0.7333	0	c.-13 others(5): Show c.-1338A>C	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	1111	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039147	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp2 HG02071.hp1 HG03688.hp1 others(2): Show HG01071.hp2 HG02071.hp1 HG03688.hp1 HG03688.hp2 NA19066.hp1	a0014 a0015 a0016 others(2): Show a0014 a0015 a0016 a0017 a0019	a0014c0019 a0015c0018 a0016c0014 others(2): Show a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0019c0012	a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 others(2): Show a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0019c0012t0001	a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 others(2): Show a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0019c0012t0001g0026	5	30	0.1667	-1	c.-11 others(6): Show c.-1186delG	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	959	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039187	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp2 others(17): Show HG00673.hp1 HG00673.hp2 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02723.hp1 HG02723.hp2 HG02970.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(11): Show a0001 a0002 a0004 a0006 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(13): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0004c0004 a0006c0020 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(13): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0004c0004t0001 a0006c0020t0002 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 others(17): Show a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0004c0004t0001g0021 a0004c0004t0001g0023 a0006c0020t0002g0020 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	20	30	0.6667	0	c.-11 others(5): Show c.-1147G>A	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	920	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039324	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0015 a0001c0001t0003g0015	1	30	0.0333	0	c.-10 others(5): Show c.-1010C>G	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	783	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039411	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01071.hp1 HG01071.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0015 a0001c0001t0003g0015	1	30	0.0333	0	c.-92 others(4): Show c.-923C>G	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	696	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039445	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp2 others(17): Show HG00673.hp1 HG00673.hp2 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02723.hp1 HG02723.hp2 HG02970.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(11): Show a0001 a0002 a0004 a0006 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(13): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0004c0004 a0006c0020 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(13): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0004c0004t0001 a0006c0020t0002 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 others(17): Show a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0004c0004t0001g0021 a0004c0004t0001g0023 a0006c0020t0002g0020 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	20	30	0.6667	0	c.-88 others(4): Show c.-889C>T	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	662	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039472	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02451.hp1 HG02970.hp1 HG02145.hp2 HG02451.hp1 HG02970.hp1	a0003 a0007 a0003 a0007	a0003c0005 a0007c0021 a0003c0005 a0007c0021	a0003c0005t0002 a0007c0021t0001 a0003c0005t0002 a0007c0021t0001	a0003c0005t0002g0002 a0003c0005t0002g0003 a0007c0021t0001g0001 a0003c0005t0002g0002 a0003c0005t0002g0003 a0007c0021t0001g0001	3	30	0.1000	0	c.-86 others(4): Show c.-862C>G	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	635	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039626	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp2 HG02451.hp1 HG02970.hp1 HG02145.hp2 HG02451.hp1 HG02970.hp1	a0003 a0007 a0003 a0007	a0003c0005 a0007c0021 a0003c0005 a0007c0021	a0003c0005t0002 a0007c0021t0001 a0003c0005t0002 a0007c0021t0001	a0003c0005t0002g0002 a0003c0005t0002g0003 a0007c0021t0001g0001 a0003c0005t0002g0002 a0003c0005t0002g0003 a0007c0021t0001g0001	3	30	0.1000	0	c.-70 others(4): Show c.-708C>T	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	481	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039627	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp2 others(16): Show HG00673.hp1 HG00673.hp2 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02723.hp1 HG02723.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(10): Show a0001 a0002 a0004 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(12): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0004c0004 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(12): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0004c0004t0001 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 others(16): Show a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0004c0004t0001g0021 a0004c0004t0001g0023 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	19	30	0.6333	0	c.-70 others(4): Show c.-707C>T	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	480	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039629	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp1 others(17): Show HG00673.hp1 HG00673.hp2 HG01071.hp1 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02723.hp1 HG02723.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0004 others(10): Show a0001 a0002 a0004 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(12): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0004c0004 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(12): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0004c0004t0001 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 others(17): Show a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0004c0004t0001g0021 a0004c0004t0001g0023 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	20	30	0.6667	0	c.-70 others(4): Show c.-705C>T	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	478	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039879	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0006 a0006	a0006c0020 a0006c0020	a0006c0020t0002 a0006c0020t0002	a0006c0020t0002g0020 a0006c0020t0002g0020	1	30	0.0333	0	c.-45 others(4): Show c.-455G>A	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	228	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039905	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0006 a0006	a0006c0020 a0006c0020	a0006c0020t0002 a0006c0020t0002	a0006c0020t0002g0020 a0006c0020t0002g0020	1	30	0.0333	0	c.-42 others(4): Show c.-429G>C	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	202	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1039992	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp2 HG01071.hp1 others(24): Show HG00673.hp1 HG00673.hp2 HG01071.hp1 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02145.hp2 HG02451.hp1 HG02451.hp2 HG02723.hp1 HG02723.hp2 HG02970.hp1 HG02970.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18970.hp2 NA18983.hp1 NA18983.hp2 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA19079.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0002 a0003 others(16): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0001c0002 a0002c0003 others(18): Show a0001c0001 a0001c0002 a0002c0003 a0002c0009 a0003c0005 a0004c0004 a0005c0022 a0006c0020 a0007c0021 a0008c0006 a0009c0007 a0010c0010 a0011c0008 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 others(18): Show a0001c0001t0003 a0001c0002t0002 a0002c0003t0001 a0002c0009t0001 a0003c0005t0002 a0004c0004t0001 a0005c0022t0001 a0006c0020t0002 a0007c0021t0001 a0008c0006t0002 a0009c0007t0002 a0010c0010t0001 a0011c0008t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 others(24): Show a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0002t0002g0011 a0002c0003t0001g0007 a0002c0009t0001g0008 a0003c0005t0002g0002 a0003c0005t0002g0003 a0004c0004t0001g0021 a0004c0004t0001g0023 a0005c0022t0001g0004 a0006c0020t0002g0020 a0007c0021t0001g0001 a0008c0006t0002g0006 a0009c0007t0002g0005 a0010c0010t0001g0013 a0011c0008t0002g0014 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	27	30	0.9000	0	c.-34 others(4): Show c.-342T>C	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	115	chr19	TogoVar
ABCA7_chr19_1035107_1070572	1040047	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG01071.hp2 HG02071.hp1 others(9): Show HG00673.hp1 HG01071.hp2 HG02071.hp1 HG02071.hp2 HG02145.hp1 HG02970.hp2 HG03688.hp1 HG03688.hp2 NA18970.hp1 NA18983.hp1 NA19066.hp1 NA20905.hp2	a0001 a0004 a0006 others(8): Show a0001 a0004 a0006 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0019	a0001c0001 a0004c0004 a0006c0020 others(8): Show a0001c0001 a0004c0004 a0006c0020 a0012c0016 a0013c0013 a0014c0019 a0015c0018 a0016c0014 a0017c0017 a0018c0015 a0019c0012	a0001c0001t0003 a0004c0004t0001 a0006c0020t0002 others(8): Show a0001c0001t0003 a0004c0004t0001 a0006c0020t0002 a0012c0016t0001 a0013c0013t0002 a0014c0019t0002 a0015c0018t0001 a0016c0014t0002 a0017c0017t0001 a0018c0015t0001 a0019c0012t0001	a0001c0001t0003g0017 a0004c0004t0001g0021 a0004c0004t0001g0023 others(9): Show a0001c0001t0003g0017 a0004c0004t0001g0021 a0004c0004t0001g0023 a0006c0020t0002g0020 a0012c0016t0001g0024 a0013c0013t0002g0030 a0014c0019t0002g0029 a0015c0018t0001g0028 a0016c0014t0002g0025 a0017c0017t0001g0027 a0018c0015t0001g0022 a0019c0012t0001g0026	12	30	0.4000	0	c.-28 others(4): Show c.-287G>A	ABCA7	ENSG00000064687.13	transcript	ENST00000263094.11	protein_coding	60	chr19	TogoVar
ABCA8_chr17_68862289_68960392	68955408	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18982.hp1 NA18982.hp1	a0011 a0011	a0011c0013 a0011c0013	a0011c0013t0001 a0011c0013t0001	a0011c0013t0001g0092 a0011c0013t0001g0092	1	274	0.0037	0	c.-35 others(4): Show c.-356C>A	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	16	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955505	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18980.hp1 NA18980.hp1	a0026 a0026	a0026c0043 a0026c0043	a0026c0043t0001 a0026c0043t0001	a0026c0043t0001g0261 a0026c0043t0001g0261	1	274	0.0037	0	c.-45 others(4): Show c.-453C>A	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	113	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955521	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-46 others(4): Show c.-469G>C	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	129	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955523	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-47 others(4): Show c.-471A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	131	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955525	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-47 others(4): Show c.-473A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	133	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955526	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-47 others(4): Show c.-474A>C	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	134	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955528	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-47 others(4): Show c.-476A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	136	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955535	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-48 others(4): Show c.-483G>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	143	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955536	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-48 others(4): Show c.-484T>C	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	144	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955542	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-490A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	150	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955543	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-491G>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	151	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955544	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-492A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	152	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955545	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-493A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	153	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955546	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-494A>C	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	154	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955547	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-495A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	155	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955549	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-497G>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	157	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955551	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-49 others(4): Show c.-499A>C	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	159	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955552	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-50 others(4): Show c.-500G>C	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	160	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955553	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-50 others(4): Show c.-501G>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	161	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955556	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-50 others(4): Show c.-504C>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	164	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955558	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-50 others(4): Show c.-506A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	166	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955559	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-50 others(4): Show c.-507A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	167	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955561	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-50 others(4): Show c.-509A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	169	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955562	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-510A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	170	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955563	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-511C>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	171	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955564	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-512A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	172	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955565	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-513C>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	173	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955566	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-514C>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	174	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955567	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-515G>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	175	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955568	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-516A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	176	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955571	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-51 others(4): Show c.-519A>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	179	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955573	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-52 others(4): Show c.-521G>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	181	chr17	TogoVar
ABCA8_chr17_68862289_68960392	68955574	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	274	0.0037	0	c.-52 others(4): Show c.-522G>T	ABCA8	ENSG00000141338.15	transcript	ENST00000586539.6	protein_coding	182	chr17	TogoVar

Search by Variant

Search

Search Results (Total: 10000 hits)