Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	status	chr	external
MRGBP_chr20_62791473_62806729	62796517	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01106.hp1 HG01255.hp2 HG01884.hp1 others(20): Show HG01106.hp1 HG01255.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp1 HG02056.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02735.hp1 HG02809.hp2 HG03195.hp1 HG03453.hp1 HG03486.hp1 HG03540.hp1 HG03669.hp1 HG03704.hp1 NA19030.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0010 a0001c0001t0022 others(2): Show a0001c0001t0006 a0001c0001t0010 a0001c0001t0022 a0001c0001t0039 a0001c0001t0040	a0001c0001t0006g0006 a0001c0001t0010g0006 a0001c0001t0022g0006 others(2): Show a0001c0001t0006g0006 a0001c0001t0010g0006 a0001c0001t0022g0006 a0001c0001t0039g0015 a0001c0001t0040g0006	23	410	0.0561	c.-7C others(2): Show c.-7C>T	MRGBP	ENSG00000101189.7	transcript	ENST00000370487.5	protein_coding	1/5		chr20	TogoVar
MRGPRF_chr11_68999398_69018246	69013164	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19088.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0112 a0001c0001t0013g0112	1	438	0.0023	c.-13 others(4): Show c.-138C>T	MRGPRF	ENSG00000172935.10	transcript	ENST00000309099.7	protein_coding	1/3		chr11	TogoVar
MRGPRF_chr11_68999398_69018246	69013183	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02055.hp1 HG02886.hp2 HG03516.hp2 HG02055.hp1 HG02886.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0042 a0001c0001t0006g0113 a0001c0001t0006g0042 a0001c0001t0006g0113	3	438	0.0069	c.-15 others(4): Show c.-157C>T	MRGPRF	ENSG00000172935.10	transcript	ENST00000309099.7	protein_coding	1/3		chr11	TogoVar
MRGPRX3_chr11_18127571_18143488	18132732	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18957.hp2 NA18961.hp1 NA18957.hp2 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0001 a0001c0001t0007g0001	2	440	0.0046	c.-33 others(3): Show c.-33C>T	MRGPRX3	ENSG00000179826.8	transcript	ENST00000621697.2	protein_coding	1/2		chr11	TogoVar
MRM1_chr17_36596583_36613964	36601663	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00597.hp1 HG00597.hp2 HG01081.hp2 others(20): Show HG00597.hp1 HG00597.hp2 HG01081.hp2 HG01943.hp2 HG01981.hp1 HG02015.hp2 HG02559.hp2 HG03834.hp2 HG04184.hp1 NA18941.hp1 NA18947.hp2 NA18963.hp1 NA18992.hp2 NA18994.hp1 NA18999.hp1 NA19004.hp1 NA19006.hp2 NA19010.hp2 NA19063.hp1 NA19070.hp2 NA19074.hp1 NA19083.hp1 NA19087.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0010 a0001c0001 a0008c0010	a0001c0001t0004 a0001c0001t0016 a0008c0010t0004 a0001c0001t0004 a0001c0001t0016 a0008c0010t0004	a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0019 others(8): Show a0001c0001t0004g0003 a0001c0001t0004g0006 a0001c0001t0004g0019 a0001c0001t0004g0025 a0001c0001t0004g0084 a0001c0001t0004g0086 a0001c0001t0004g0095 a0001c0001t0004g0096 a0001c0001t0004g0099 a0001c0001t0016g0033 a0008c0010t0004g0006	23	395	0.0582	c.-14 others(4): Show c.-148C>T	MRM1	ENSG00000278619.5	transcript	ENST00000614766.5	protein_coding	1/5		chr17	TogoVar
MRNIP_chr5_179832276_179863817	179858817	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03195.hp1 HG03195.hp1	a0007 a0007	a0007c0009 a0007c0009	a0007c0009t0004 a0007c0009t0004	a0007c0009t0004g0055 a0007c0009t0004g0055	1	444	0.0023	c.-21 others(3): Show c.-21C>T	MRNIP	ENSG00000161010.16	transcript	ENST00000292586.11	protein_coding	1/7		chr5	TogoVar
MRPL12_chr17_81698367_81712517	81703392	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18991.hp2 NA18991.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0035 a0002c0002t0006g0035	1	412	0.0024	c.-11 others(4): Show c.-110A>T	MRPL12	ENSG00000262814.8	transcript	ENST00000333676.8	protein_coding	1/5		chr17	TogoVar
MRPL12_chr17_81698367_81712517	81703396	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0002 a0001c0001t0016g0002	1	412	0.0024	c.-10 others(4): Show c.-106G>T	MRPL12	ENSG00000262814.8	transcript	ENST00000333676.8	protein_coding	1/5		chr17	TogoVar
MRPL15_chr8_54130241_54153514	54135250	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03942.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0005 a0001c0001t0007g0005	1	390	0.0026	c.-34 others(3): Show c.-34A>T	MRPL15	ENSG00000137547.9	transcript	ENST00000260102.9	protein_coding	1/5		chr8	TogoVar
MRPL41_chr9_137546879_137557555	137551970	C C	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0001 a0001c0001t0006g0001	1	408	0.0025	c.-17 others(3): Show c.-17C>G	MRPL41	ENSG00000182154.8	transcript	ENST00000371443.6	protein_coding	1/2		chr9	TogoVar
MRPS16_chr10_73243849_73257644	73252585	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02109.hp2 HG03669.hp2 HG03704.hp1 others(1): Show HG02109.hp2 HG03669.hp2 HG03704.hp1 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0007 a0001c0001t0006g0007	4	344	0.0116	c.-10 others(4): Show c.-103G>T	MRPS16	ENSG00000182180.14	transcript	ENST00000372945.8	protein_coding	1/3		chr10	TogoVar
MRTFA_chr22_40405289_40641719	40636705	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0010 a0001c0004t0010	a0001c0004t0010g0256 a0001c0004t0010g0256	1	256	0.0039	c.-31 others(4): Show c.-311C>T	MRTFA	ENSG00000196588.21	transcript	ENST00000355630.10	protein_coding	1/15	WARNING_TRANSCRIPT_NO_START_CODON	chr22	TogoVar
MS4A15_chr11_60751867_60781733	60756936	T T	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02055.hp1 HG02257.hp2 HG02258.hp2 others(29): Show HG02055.hp1 HG02257.hp2 HG02258.hp2 HG02280.hp1 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp1 NA19043.hp2 NA20300.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 a0001c0001 a0002c0002 a0003c0003	a0001c0001t0009 a0002c0002t0004 a0002c0002t0006 others(5): Show a0001c0001t0009 a0002c0002t0004 a0002c0002t0006 a0002c0002t0007 a0002c0002t0009 a0002c0002t0013 a0003c0003t0004 a0003c0003t0007	a0001c0001t0009g0186 a0002c0002t0004g0052 a0002c0002t0004g0053 others(22): Show a0001c0001t0009g0186 a0002c0002t0004g0052 a0002c0002t0004g0053 a0002c0002t0004g0228 a0002c0002t0004g0229 a0002c0002t0004g0237 a0002c0002t0004g0274 a0002c0002t0004g0275 a0002c0002t0004g0277 a0002c0002t0004g0279 a0002c0002t0004g0351 a0002c0002t0006g0047 a0002c0002t0006g0183 a0002c0002t0006g0235 a0002c0002t0006g0236 a0002c0002t0006g0238 a0002c0002t0006g0278 a0002c0002t0007g0015 a0002c0002t0009g0051 a0002c0002t0013g0276 a0003c0003t0004g0199 a0003c0003t0004g0219 a0003c0003t0004g0280 a0003c0003t0004g0281 a0003c0003t0007g0048	32	450	0.0711	c.-15 others(4): Show c.-151T>C	MS4A15	ENSG00000166961.15	transcript	ENST00000405633.4	protein_coding	1/7		chr11	TogoVar
MS4A3_chr11_60051665_60076115	60056714	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19076.hp2 NA19076.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0028 a0001c0001t0009g0028	1	408	0.0025	c.-42 others(3): Show c.-42C>T	MS4A3	ENSG00000149516.15	transcript	ENST00000278865.8	protein_coding	1/7		chr11	TogoVar
MS4A6E_chr11_60322255_60346341	60327346	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00323.hp1 HG00408.hp1 HG00423.hp2 others(152): Show HG00323.hp1 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp2 HG01433.hp2 HG01496.hp2 HG01928.hp1 HG01943.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02055.hp2 HG02056.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp2 HG02683.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG03579.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04228.hp2 HG06807.hp1 NA18747.hp1 NA18939.hp1 NA18941.hp1 NA18945.hp2 NA18946.hp2 NA18949.hp1 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp2 NA18968.hp2 NA18969.hp2 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18974.hp2 NA18977.hp1 NA18978.hp1 NA18980.hp1 NA18982.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp1 NA18991.hp2 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp1 NA19002.hp2 NA19003.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19054.hp2 NA19055.hp2 NA19058.hp1 NA19060.hp2 NA19064.hp2 NA19066.hp2 NA19068.hp1 NA19072.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19080.hp1 NA19081.hp1 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0003 a0002c0002 a0002c0004 others(2): Show a0001c0003 a0002c0002 a0002c0004 a0003c0005 a0004c0010	a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 others(8): Show a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 a0002c0002t0002 a0002c0002t0005 a0002c0002t0006 a0002c0002t0014 a0002c0002t0015 a0002c0004t0002 a0003c0005t0002 a0004c0010t0002	a0001c0003t0002g0028 a0001c0003t0002g0055 a0001c0003t0002g0056 others(102): Show a0001c0003t0002g0028 a0001c0003t0002g0055 a0001c0003t0002g0056 a0001c0003t0002g0057 a0001c0003t0002g0216 a0001c0003t0002g0218 a0001c0003t0002g0229 a0001c0003t0002g0230 a0001c0003t0002g0233 a0001c0003t0002g0234 a0001c0003t0002g0235 a0001c0003t0002g0236 a0001c0003t0002g0272 a0001c0003t0002g0273 a0001c0003t0006g0010 a0001c0003t0006g0232 a0001c0003t0006g0283 a0001c0003t0011g0231 a0001c0003t0011g0237 a0002c0002t0002g0001 a0002c0002t0002g0006 a0002c0002t0002g0011 a0002c0002t0002g0019 a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0002g0058 a0002c0002t0002g0059 a0002c0002t0002g0060 a0002c0002t0002g0061 a0002c0002t0002g0062 a0002c0002t0002g0063 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0071 a0002c0002t0002g0219 a0002c0002t0002g0222 a0002c0002t0002g0224 a0002c0002t0002g0238 a0002c0002t0002g0239 a0002c0002t0002g0240 a0002c0002t0002g0243 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0247 a0002c0002t0002g0250 a0002c0002t0002g0251 a0002c0002t0002g0253 a0002c0002t0002g0254 a0002c0002t0002g0256 a0002c0002t0002g0258 a0002c0002t0002g0259 a0002c0002t0002g0261 a0002c0002t0002g0263 a0002c0002t0002g0264 a0002c0002t0002g0265 a0002c0002t0002g0266 a0002c0002t0002g0268 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0002g0271 a0002c0002t0002g0274 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0002g0277 a0002c0002t0002g0278 a0002c0002t0002g0279 a0002c0002t0002g0280 a0002c0002t0002g0281 a0002c0002t0002g0282 a0002c0002t0002g0288 a0002c0002t0005g0001 a0002c0002t0005g0018 a0002c0002t0005g0019 a0002c0002t0005g0031 a0002c0002t0005g0054 a0002c0002t0005g0217 a0002c0002t0005g0220 a0002c0002t0005g0223 a0002c0002t0005g0225 a0002c0002t0005g0226 a0002c0002t0005g0241 a0002c0002t0005g0242 a0002c0002t0005g0246 a0002c0002t0005g0252 a0002c0002t0005g0262 a0002c0002t0005g0267 a0002c0002t0006g0001 a0002c0002t0006g0030 a0002c0002t0006g0059 a0002c0002t0006g0221 a0002c0002t0006g0227 a0002c0002t0006g0228 a0002c0002t0006g0260 a0002c0002t0014g0287 a0002c0002t0015g0060 a0002c0004t0002g0006 a0002c0004t0002g0248 a0002c0004t0002g0249 a0002c0004t0002g0255 a0003c0005t0002g0066 a0003c0005t0002g0068 a0004c0010t0002g0257	155	450	0.3444	c.-77 others(3): Show c.-77C>T	MS4A6E	ENSG00000166926.9	transcript	ENST00000684409.1	protein_coding	1/5		chr11	TogoVar
MS4A6E_chr11_60322255_60346341	60327347	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01261.hp2 HG01891.hp1 HG02630.hp1 HG01261.hp2 HG01891.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0012 a0001c0001t0008 a0001c0001t0012	a0001c0001t0008g0204 a0001c0001t0008g0205 a0001c0001t0012g0208 a0001c0001t0008g0204 a0001c0001t0008g0205 a0001c0001t0012g0208	3	450	0.0067	c.-76 others(3): Show c.-76G>A	MS4A6E	ENSG00000166926.9	transcript	ENST00000684409.1	protein_coding	1/5		chr11	TogoVar
MS4A6E_chr11_60322255_60346341	60327385	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00323.hp1 HG00408.hp1 HG00423.hp2 others(152): Show HG00323.hp1 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp2 HG01433.hp2 HG01496.hp2 HG01928.hp1 HG01943.hp1 HG01975.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02055.hp2 HG02056.hp2 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02148.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02647.hp2 HG02683.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02896.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG03579.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04228.hp2 HG06807.hp1 NA18747.hp1 NA18939.hp1 NA18941.hp1 NA18945.hp2 NA18946.hp2 NA18949.hp1 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp2 NA18968.hp2 NA18969.hp2 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18974.hp2 NA18977.hp1 NA18978.hp1 NA18980.hp1 NA18982.hp1 NA18984.hp2 NA18986.hp1 NA18988.hp1 NA18991.hp2 NA18992.hp1 NA18993.hp2 NA18994.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp1 NA19002.hp2 NA19003.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19054.hp2 NA19055.hp2 NA19058.hp1 NA19060.hp2 NA19064.hp2 NA19066.hp2 NA19068.hp1 NA19072.hp2 NA19074.hp2 NA19075.hp2 NA19077.hp2 NA19080.hp1 NA19081.hp1 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA19089.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0003 a0002c0002 a0002c0004 others(2): Show a0001c0003 a0002c0002 a0002c0004 a0003c0005 a0004c0010	a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 others(8): Show a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 a0002c0002t0002 a0002c0002t0005 a0002c0002t0006 a0002c0002t0014 a0002c0002t0015 a0002c0004t0002 a0003c0005t0002 a0004c0010t0002	a0001c0003t0002g0028 a0001c0003t0002g0055 a0001c0003t0002g0056 others(102): Show a0001c0003t0002g0028 a0001c0003t0002g0055 a0001c0003t0002g0056 a0001c0003t0002g0057 a0001c0003t0002g0216 a0001c0003t0002g0218 a0001c0003t0002g0229 a0001c0003t0002g0230 a0001c0003t0002g0233 a0001c0003t0002g0234 a0001c0003t0002g0235 a0001c0003t0002g0236 a0001c0003t0002g0272 a0001c0003t0002g0273 a0001c0003t0006g0010 a0001c0003t0006g0232 a0001c0003t0006g0283 a0001c0003t0011g0231 a0001c0003t0011g0237 a0002c0002t0002g0001 a0002c0002t0002g0006 a0002c0002t0002g0011 a0002c0002t0002g0019 a0002c0002t0002g0029 a0002c0002t0002g0030 a0002c0002t0002g0031 a0002c0002t0002g0058 a0002c0002t0002g0059 a0002c0002t0002g0060 a0002c0002t0002g0061 a0002c0002t0002g0062 a0002c0002t0002g0063 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0067 a0002c0002t0002g0068 a0002c0002t0002g0071 a0002c0002t0002g0219 a0002c0002t0002g0222 a0002c0002t0002g0224 a0002c0002t0002g0238 a0002c0002t0002g0239 a0002c0002t0002g0240 a0002c0002t0002g0243 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0247 a0002c0002t0002g0250 a0002c0002t0002g0251 a0002c0002t0002g0253 a0002c0002t0002g0254 a0002c0002t0002g0256 a0002c0002t0002g0258 a0002c0002t0002g0259 a0002c0002t0002g0261 a0002c0002t0002g0263 a0002c0002t0002g0264 a0002c0002t0002g0265 a0002c0002t0002g0266 a0002c0002t0002g0268 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0002g0271 a0002c0002t0002g0274 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0002g0277 a0002c0002t0002g0278 a0002c0002t0002g0279 a0002c0002t0002g0280 a0002c0002t0002g0281 a0002c0002t0002g0282 a0002c0002t0002g0288 a0002c0002t0005g0001 a0002c0002t0005g0018 a0002c0002t0005g0019 a0002c0002t0005g0031 a0002c0002t0005g0054 a0002c0002t0005g0217 a0002c0002t0005g0220 a0002c0002t0005g0223 a0002c0002t0005g0225 a0002c0002t0005g0226 a0002c0002t0005g0241 a0002c0002t0005g0242 a0002c0002t0005g0246 a0002c0002t0005g0252 a0002c0002t0005g0262 a0002c0002t0005g0267 a0002c0002t0006g0001 a0002c0002t0006g0030 a0002c0002t0006g0059 a0002c0002t0006g0221 a0002c0002t0006g0227 a0002c0002t0006g0228 a0002c0002t0006g0260 a0002c0002t0014g0287 a0002c0002t0015g0060 a0002c0004t0002g0006 a0002c0004t0002g0248 a0002c0004t0002g0249 a0002c0004t0002g0255 a0003c0005t0002g0066 a0003c0005t0002g0068 a0004c0010t0002g0257	155	450	0.3444	c.-38 others(3): Show c.-38C>T	MS4A6E	ENSG00000166926.9	transcript	ENST00000684409.1	protein_coding	1/5		chr11	TogoVar
MS4A8_chr11_60694612_60720807	60699651	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01243.hp1 HG01884.hp1 HG01891.hp2 others(15): Show HG01243.hp1 HG01884.hp1 HG01891.hp2 HG02258.hp2 HG02280.hp1 HG02622.hp2 HG02723.hp2 HG02809.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03209.hp2 NA18522.hp1 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0005 a0002c0002t0003 a0002c0002t0005	a0002c0002t0003g0016 a0002c0002t0003g0024 a0002c0002t0003g0040 others(9): Show a0002c0002t0003g0016 a0002c0002t0003g0024 a0002c0002t0003g0040 a0002c0002t0003g0135 a0002c0002t0003g0137 a0002c0002t0003g0138 a0002c0002t0003g0140 a0002c0002t0003g0141 a0002c0002t0003g0142 a0002c0002t0003g0143 a0002c0002t0005g0136 a0002c0002t0005g0139	18	402	0.0448	c.-12 others(4): Show c.-126C>T	MS4A8	ENSG00000166959.8	transcript	ENST00000300226.7	protein_coding	1/7		chr11	TogoVar
MSANTD3_chr9_100422143_100456734	100427257	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01891.hp2 HG02280.hp1 HG02572.hp1 others(9): Show HG01891.hp2 HG02280.hp1 HG02572.hp1 HG02717.hp2 HG02723.hp1 HG02895.hp1 HG02922.hp1 HG03209.hp2 HG03225.hp1 HG03516.hp2 HG03579.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0012 a0001c0001t0005g0023 a0001c0001t0005g0024 others(5): Show a0001c0001t0005g0012 a0001c0001t0005g0023 a0001c0001t0005g0024 a0001c0001t0005g0047 a0001c0001t0005g0048 a0001c0001t0005g0049 a0001c0001t0005g0050 a0001c0001t0005g0051	12	328	0.0366	c.-17 others(4): Show c.-170C>T	MSANTD3	ENSG00000066697.15	transcript	ENST00000395067.7	protein_coding	1/3		chr9	TogoVar
MSANTD3_chr9_100422143_100456734	100427280	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01099.hp2 HG01192.hp1 HG01099.hp2 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0034 a0001c0001t0013g0160 a0001c0001t0013g0034 a0001c0001t0013g0160	2	328	0.0061	c.-14 others(4): Show c.-147C>T	MSANTD3	ENSG00000066697.15	transcript	ENST00000395067.7	protein_coding	1/3		chr9	TogoVar
MSANTD4_chr11_106002899_106027240	106021272	A A	G G	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp1 HG00280.hp1 HG00323.hp2 others(99): Show HG00099.hp1 HG00280.hp1 HG00323.hp2 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00673.hp2 HG01167.hp1 HG01192.hp1 HG01261.hp1 HG01358.hp1 HG01361.hp2 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01993.hp2 HG02004.hp1 HG02027.hp1 HG02027.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02129.hp2 HG02132.hp2 HG02165.hp2 HG02300.hp2 HG02523.hp2 HG02572.hp1 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03942.hp1 HG04204.hp2 NA18747.hp2 NA18941.hp1 NA18944.hp1 NA18948.hp2 NA18949.hp2 NA18952.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp2 NA18967.hp2 NA18970.hp2 NA18971.hp2 NA18972.hp2 NA18973.hp2 NA18979.hp1 NA18983.hp1 NA18983.hp2 NA18985.hp2 NA18987.hp1 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18990.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp2 NA18998.hp1 NA19000.hp1 NA19002.hp2 NA19004.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp2 NA19012.hp2 NA19054.hp2 NA19057.hp1 NA19058.hp1 NA19059.hp2 NA19062.hp1 NA19062.hp2 NA19066.hp2 NA19072.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp2 NA19084.hp1 NA19085.hp2 NA19088.hp2 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0011 a0001c0001t0017 a0001c0001t0023 a0001c0001t0027 a0001c0002t0008	a0001c0001t0002g0002 a0001c0001t0002g0047 a0001c0001t0002g0055 others(20): Show a0001c0001t0002g0002 a0001c0001t0002g0047 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0003g0003 a0001c0001t0003g0045 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0058 a0001c0001t0008g0015 a0001c0001t0008g0060 a0001c0001t0011g0014 a0001c0001t0011g0046 a0001c0001t0011g0050 a0001c0001t0017g0034 a0001c0001t0023g0059 a0001c0001t0027g0097 a0001c0002t0008g0021	102	384	0.2656	c.-46 others(4): Show c.-461T>C	MSANTD4	ENSG00000170903.12	transcript	ENST00000301919.9	protein_coding	1/3		chr11	TogoVar
MSANTD4_chr11_106002899_106027240	106021340	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00558.hp2 HG00621.hp1 HG02083.hp2 others(4): Show HG00558.hp2 HG00621.hp1 HG02083.hp2 NA18747.hp2 NA18989.hp1 NA19057.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0001t0023 a0001c0002t0008 a0001c0001t0008 a0001c0001t0023 a0001c0002t0008	a0001c0001t0008g0015 a0001c0001t0008g0060 a0001c0001t0023g0059 others(1): Show a0001c0001t0008g0015 a0001c0001t0008g0060 a0001c0001t0023g0059 a0001c0002t0008g0021	7	384	0.0182	c.-52 others(4): Show c.-529C>G	MSANTD4	ENSG00000170903.12	transcript	ENST00000301919.9	protein_coding	1/3		chr11	TogoVar
MSANTD4_chr11_106002899_106027240	106022032	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0098 a0001c0001t0028g0098	1	384	0.0026	c.-12 others(5): Show c.-1221G>T	MSANTD4	ENSG00000170903.12	transcript	ENST00000301919.9	protein_coding	1/3		chr11	TogoVar
MSANTD5_chr5_178689572_178702761	178697718	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG04204.hp1 HG04204.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0061 a0002c0002t0006g0061	1	430	0.0023	c.-12 others(4): Show c.-127C>T	MSANTD5	ENSG00000285891.2	transcript	ENST00000648368.2	protein_coding	1/4		chr5	TogoVar
MSANTD7_chr10_14833306_14851999	14838396	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0032 a0001c0001t0031g0032	1	404	0.0025	c.-37 others(4): Show c.-379C>T	MSANTD7	ENSG00000284024.4	transcript	ENST00000640019.3	protein_coding	1/5		chr10	TogoVar
MSANTD7_chr10_14833306_14851999	14839937	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0006 a0001c0001t0030g0006	1	404	0.0025	c.-28 others(4): Show c.-283C>T	MSANTD7	ENSG00000284024.4	transcript	ENST00000640019.3	protein_coding	2/5		chr10	TogoVar
MSC_chr8_71836560_71849412	71844199	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18964.hp1 NA18992.hp2 NA19056.hp1 others(2): Show NA18964.hp1 NA18992.hp2 NA19056.hp1 NA19066.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0023 a0001c0001t0007g0040 a0001c0001t0007g0023 a0001c0001t0007g0040	5	472	0.0106	c.-21 others(3): Show c.-21G>A	MSC	ENSG00000178860.9	transcript	ENST00000325509.5	protein_coding	1/2		chr8	TogoVar
MSH3_chr5_80649652_80881815	80654689	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00544.hp2 HG01070.hp2 HG01071.hp2 others(26): Show HG00544.hp2 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01496.hp2 HG01516.hp2 HG01952.hp2 HG01993.hp1 HG02027.hp2 HG02132.hp2 HG02135.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG03239.hp1 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03831.hp2 HG04115.hp1 HG04115.hp2 NA18945.hp2 NA18978.hp2 NA19056.hp1 NA19058.hp2 NA19081.hp1 NA19091.hp1 NA20805.hp1	a0001 a0004 a0011 others(3): Show a0001 a0004 a0011 a0016 a0018 a0035	a0001c0001 a0004c0005 a0011c0012 others(3): Show a0001c0001 a0004c0005 a0011c0012 a0016c0019 a0018c0017 a0035c0029	a0001c0001t0007 a0004c0005t0007 a0004c0005t0013 others(5): Show a0001c0001t0007 a0004c0005t0007 a0004c0005t0013 a0004c0005t0029 a0011c0012t0015 a0016c0019t0017 a0018c0017t0007 a0035c0029t0017	a0001c0001t0007g0223 a0001c0001t0007g0224 a0004c0005t0007g0002 others(25): Show a0001c0001t0007g0223 a0001c0001t0007g0224 a0004c0005t0007g0002 a0004c0005t0007g0225 a0004c0005t0007g0274 a0004c0005t0007g0275 a0004c0005t0007g0276 a0004c0005t0007g0279 a0004c0005t0007g0280 a0004c0005t0007g0282 a0004c0005t0007g0286 a0004c0005t0007g0290 a0004c0005t0007g0291 a0004c0005t0007g0293 a0004c0005t0007g0294 a0004c0005t0007g0305 a0004c0005t0007g0306 a0004c0005t0007g0308 a0004c0005t0013g0281 a0004c0005t0013g0288 a0004c0005t0013g0292 a0004c0005t0029g0287 a0011c0012t0015g0283 a0011c0012t0015g0284 a0016c0019t0017g0289 a0018c0017t0007g0227 a0018c0017t0007g0228 a0035c0029t0017g0229	29	362	0.0801	c.-39 others(3): Show c.-39C>T	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	1/24		chr5	TogoVar
MSH3_chr5_80649652_80881815	80654693	A A	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02148.hp1 HG02148.hp1	a0024 a0024	a0024c0041 a0024c0041	a0024c0041t0028 a0024c0041t0028	a0024c0041t0028g0258 a0024c0041t0028g0258	1	362	0.0028	c.-35 others(3): Show c.-35A>T	MSH3	ENSG00000113318.11	transcript	ENST00000265081.7	protein_coding	1/24		chr5	TogoVar
MSH4_chr1_75791882_75918242	75796894	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0007 a0001c0004t0007	a0001c0004t0007g0045 a0001c0004t0007g0045	1	332	0.0030	c.-92 others(3): Show c.-92C>T	MSH4	ENSG00000057468.7	transcript	ENST00000263187.4	protein_coding	1/20		chr1	TogoVar
MSI1_chr12_120336330_120374164	120369118	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01070.hp2 HG01361.hp2 HG01433.hp2 others(5): Show HG01070.hp2 HG01361.hp2 HG01433.hp2 HG01952.hp1 HG01978.hp1 HG01981.hp2 HG02300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0021 a0001c0001t0022 a0001c0001t0007 a0001c0001t0021 a0001c0001t0022	a0001c0001t0007g0008 a0001c0001t0007g0228 a0001c0001t0021g0227 others(1): Show a0001c0001t0007g0008 a0001c0001t0007g0228 a0001c0001t0021g0227 a0001c0001t0022g0226	8	348	0.0230	c.-27 others(3): Show c.-27C>T	MSI1	ENSG00000135097.7	transcript	ENST00000257552.7	protein_coding	1/15		chr12	TogoVar
MSL1_chr17_40116971_40141917	40121981	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp1 HG02148.hp2 HG00099.hp1 HG02148.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0013 a0001c0007t0013	a0001c0007t0013g0061 a0001c0007t0013g0062 a0001c0007t0013g0061 a0001c0007t0013g0062	2	356	0.0056	c.-63 others(4): Show c.-632C>T	MSL1	ENSG00000188895.12	transcript	ENST00000398532.9	protein_coding	1/9		chr17	TogoVar
MSL2_chr3_136143917_136201335	136195806	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0179 a0001c0001t0023g0179	1	310	0.0032	c.-69 others(4): Show c.-693C>T	MSL2	ENSG00000174579.5	transcript	ENST00000309993.3	protein_coding	1/2		chr3	TogoVar
MSL2_chr3_136143917_136201335	136196054	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19010.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0310 a0001c0001t0032g0310	1	310	0.0032	c.-94 others(4): Show c.-941C>T	MSL2	ENSG00000174579.5	transcript	ENST00000309993.3	protein_coding	1/2		chr3	TogoVar
MSL3_chrX_11753237_11780772	11758249	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0002 a0001c0001t0004g0002	1	297	0.0034	c.-15 others(3): Show c.-15C>T	MSL3	ENSG00000005302.19	transcript	ENST00000312196.10	protein_coding	1/13		chrX	TogoVar
MSLN_chr16_755734_773862	760757	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01943.hp2 HG01952.hp2 HG01975.hp1 others(16): Show HG01943.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG02004.hp1 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02647.hp2 HG02717.hp2 HG02818.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG03041.hp2 HG03130.hp2 HG03516.hp1 NA18522.hp2 NA21309.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0002c0003 a0007c0016 a0001c0001 a0002c0003 a0007c0016	a0001c0001t0005 a0002c0003t0004 a0007c0016t0005 a0001c0001t0005 a0002c0003t0004 a0007c0016t0005	a0001c0001t0005g0221 a0002c0003t0004g0211 a0002c0003t0004g0212 others(15): Show a0001c0001t0005g0221 a0002c0003t0004g0211 a0002c0003t0004g0212 a0002c0003t0004g0213 a0002c0003t0004g0214 a0002c0003t0004g0215 a0002c0003t0004g0216 a0002c0003t0004g0217 a0002c0003t0004g0218 a0002c0003t0004g0219 a0002c0003t0004g0220 a0002c0003t0004g0230 a0002c0003t0004g0231 a0002c0003t0004g0232 a0002c0003t0004g0233 a0002c0003t0004g0234 a0007c0016t0005g0012 a0007c0016t0005g0229	19	388	0.0490	c.-17 others(4): Show c.-176C>T	MSLN	ENSG00000102854.16	transcript	ENST00000545450.7	protein_coding	1/18		chr16	TogoVar
MSLN_chr16_755734_773862	761110	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02004.hp2 HG02004.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0012	a0002c0002t0012g0315 a0002c0002t0012g0315	1	388	0.0026	c.-74 others(3): Show c.-74C>T	MSLN	ENSG00000102854.16	transcript	ENST00000545450.7	protein_coding	2/18		chr16	TogoVar
MSN_chrX_65662654_65746931	65667676	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0094 a0001c0001t0008g0094	1	170	0.0059	c.-16 others(4): Show c.-166G>A	MSN	ENSG00000147065.18	transcript	ENST00000360270.7	protein_coding	1/13		chrX	TogoVar
MST1_chr3_49678947_49694474	49688745	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00099.hp2 HG00140.hp2 HG00280.hp2 others(9): Show HG00099.hp2 HG00140.hp2 HG00280.hp2 HG01106.hp1 HG01516.hp2 HG02055.hp1 HG02602.hp1 HG02698.hp2 HG02738.hp2 HG03831.hp2 NA18991.hp1 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0007 a0002c0002 a0001c0007 a0002c0002	a0001c0007t0002 a0002c0002t0002 a0001c0007t0002 a0002c0002t0002	a0001c0007t0002g0064 a0002c0002t0002g0016 a0002c0002t0002g0020 others(2): Show a0001c0007t0002g0064 a0002c0002t0002g0016 a0002c0002t0002g0020 a0002c0002t0002g0063 a0002c0002t0002g0065	12	320	0.0375	c.-54 others(3): Show c.-54C>T	MST1	ENSG00000173531.16	transcript	ENST00000449682.3	protein_coding	1/18		chr3	TogoVar
MSX1_chr4_4854665_4868936	4859671	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00609.hp1 HG02809.hp2 NA18975.hp2 HG00609.hp1 HG02809.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0082 a0001c0001t0083 a0001c0003t0081 a0001c0001t0082 a0001c0001t0083 a0001c0003t0081	a0001c0001t0082g0001 a0001c0001t0083g0001 a0001c0003t0081g0002 a0001c0001t0082g0001 a0001c0001t0083g0001 a0001c0003t0081g0002	3	440	0.0068	c.-22 others(4): Show c.-229C>T	MSX1	ENSG00000163132.8	transcript	ENST00000382723.5	protein_coding	1/2		chr4	TogoVar
MT1F_chr16_56652959_56664303	56657981	G G	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG00639.hp2 HG00738.hp1 HG01069.hp1 others(21): Show HG00639.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01167.hp1 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01261.hp2 HG01361.hp1 HG01516.hp1 HG01517.hp2 HG01928.hp1 HG01981.hp2 HG02300.hp2 HG02630.hp2 HG02735.hp1 HG03130.hp2 HG03239.hp1 HG03490.hp2 HG03704.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0004 a0001c0001t0002g0001 a0001c0001t0002g0004	24	462	0.0520	c.-78 others(3): Show c.-78G>T	MT1F	ENSG00000198417.7	transcript	ENST00000334350.7	protein_coding	1/3		chr16	TogoVar
MT2A_chr16_56603584_56614497	56608616	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA19054.hp1 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0001 a0001c0001t0003g0001	1	458	0.0022	c.-40 others(3): Show c.-40G>A	MT2A	ENSG00000125148.7	transcript	ENST00000245185.6	protein_coding	1/3		chr16	TogoVar
MTA2_chr11_62588214_62606865	62601701	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18944.hp1 NA18955.hp2 NA18959.hp1 others(16): Show NA18944.hp1 NA18955.hp2 NA18959.hp1 NA18960.hp1 NA18963.hp1 NA18973.hp2 NA18983.hp1 NA18994.hp1 NA18997.hp1 NA19004.hp1 NA19009.hp2 NA19056.hp1 NA19065.hp1 NA19068.hp1 NA19083.hp2 NA19085.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0023 a0001c0001t0004 a0001c0001t0023	a0001c0001t0004g0003 a0001c0001t0023g0079 a0001c0001t0004g0003 a0001c0001t0023g0079	19	362	0.0525	c.-25 others(4): Show c.-251C>T	MTA2	ENSG00000149480.7	transcript	ENST00000278823.7	protein_coding	1/18		chr11	TogoVar
MTARC2_chr1_220743322_220789815	220748493	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG03041.hp1 HG03540.hp2 NA18522.hp1 HG03041.hp1 HG03540.hp2 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0009 a0001c0001 a0001c0006 a0002c0009	a0001c0001t0004 a0001c0006t0004 a0002c0009t0004 a0001c0001t0004 a0001c0006t0004 a0002c0009t0004	a0001c0001t0004g0170 a0001c0006t0004g0253 a0002c0009t0004g0169 a0001c0001t0004g0170 a0001c0006t0004g0253 a0002c0009t0004g0169	3	398	0.0075	c.-39 others(3): Show c.-39C>T	MTARC2	ENSG00000117791.16	transcript	ENST00000366913.8	protein_coding	1/8		chr1	TogoVar
MTFP1_chr22_30420768_30434054	30425859	C C	T T	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01496.hp2 NA19240.hp2 HG01496.hp2 NA19240.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0006 a0001c0002t0005g0006	2	444	0.0045	c.-21 others(3): Show c.-21C>T	MTFP1	ENSG00000242114.6	transcript	ENST00000266263.10	protein_coding	1/4		chr22	TogoVar
MTFR2_chr6_136226034_136255311	136250256	C C	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	NA18970.hp2 NA18980.hp1 NA19002.hp1 others(5): Show NA18970.hp2 NA18980.hp1 NA19002.hp1 NA19004.hp1 NA19011.hp2 NA19056.hp2 NA19063.hp1 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0013 a0001c0001t0003g0280 a0001c0001t0003g0281 others(2): Show a0001c0001t0003g0013 a0001c0001t0003g0280 a0001c0001t0003g0281 a0001c0001t0003g0282 a0001c0001t0003g0283	8	418	0.0191	c.-33 others(4): Show c.-335G>T	MTFR2	ENSG00000146410.12	transcript	ENST00000420702.6	protein_coding	1/8		chr6	TogoVar
MTIF2_chr2_55231595_55274231	55268702	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG02965.hp1 HG02965.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0277 a0002c0002t0003g0277	1	384	0.0026	c.-19 others(4): Show c.-199C>T	MTIF2	ENSG00000085760.15	transcript	ENST00000263629.9	protein_coding	2/16		chr2	TogoVar
MTIF2_chr2_55231595_55274231	55269225	G G	C C	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01070.hp1 HG01071.hp2 HG01261.hp2 others(8): Show HG01070.hp1 HG01071.hp2 HG01261.hp2 HG01433.hp1 HG01515.hp1 HG02015.hp2 HG02280.hp1 NA18970.hp2 NA18975.hp2 NA19002.hp1 NA19084.hp1	a0002 a0007 a0002 a0007	a0002c0004 a0007c0009 a0002c0004 a0007c0009	a0002c0004t0002 a0007c0009t0002 a0002c0004t0002 a0007c0009t0002	a0002c0004t0002g0044 a0002c0004t0002g0045 a0002c0004t0002g0278 others(6): Show a0002c0004t0002g0044 a0002c0004t0002g0045 a0002c0004t0002g0278 a0002c0004t0002g0279 a0002c0004t0002g0280 a0002c0004t0002g0281 a0002c0004t0002g0282 a0002c0004t0002g0284 a0007c0009t0002g0283	11	384	0.0287	c.-29 others(4): Show c.-293C>G	MTIF2	ENSG00000085760.15	transcript	ENST00000263629.9	protein_coding	1/16		chr2	TogoVar
MTIF3_chr13_27430643_27455564	27450557	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01074.hp2 HG01081.hp1 HG01106.hp2 others(43): Show HG01074.hp2 HG01081.hp1 HG01106.hp2 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01361.hp1 HG01433.hp2 HG01516.hp1 HG01952.hp1 HG02071.hp2 HG02129.hp2 HG02523.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG02965.hp2 HG03209.hp2 HG03239.hp1 HG03516.hp2 HG03654.hp1 HG03654.hp2 HG03942.hp2 HG04204.hp1 HG06807.hp2 NA18747.hp1 NA18941.hp2 NA18942.hp2 NA18954.hp1 NA18959.hp1 NA18962.hp1 NA18965.hp1 NA18967.hp2 NA18985.hp1 NA18990.hp2 NA19009.hp1 NA19062.hp1 NA19067.hp1 NA19077.hp1 NA19079.hp2 NA19086.hp1 NA20805.hp1 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0004c0006	a0001c0001t0002 a0001c0003t0002 a0002c0002t0002 others(1): Show a0001c0001t0002 a0001c0003t0002 a0002c0002t0002 a0004c0006t0002	a0001c0001t0002g0018 a0001c0001t0002g0047 a0001c0001t0002g0048 others(29): Show a0001c0001t0002g0018 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0242 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0250 a0001c0003t0002g0008 a0001c0003t0002g0046 a0001c0003t0002g0227 a0001c0003t0002g0228 a0001c0003t0002g0229 a0001c0003t0002g0230 a0002c0002t0002g0241 a0002c0002t0002g0243 a0002c0002t0002g0249 a0004c0006t0002g0246	46	414	0.1111	c.-11 others(4): Show c.-119C>T	MTIF3	ENSG00000122033.15	transcript	ENST00000381120.8	protein_coding	1/5		chr13	TogoVar
MTMR10_chr15_30933941_30996628	30991595	G G	A A	5_prime_UTR_premature_start_codon_gain_variant 5_prime_UTR_premature_start_codon_gain_variant	LOW	HG01109.hp1 HG01891.hp2 HG02647.hp2 others(2): Show HG01109.hp1 HG01891.hp2 HG02647.hp2 HG02896.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0031 a0001c0001t0010g0223 a0001c0001t0010g0224 others(1): Show a0001c0001t0010g0031 a0001c0001t0010g0223 a0001c0001t0010g0224 a0001c0001t0010g0225	5	277	0.0181	c.-89 others(3): Show c.-89C>T	MTMR10	ENSG00000166912.17	transcript	ENST00000435680.6	protein_coding	1/16		chr15	TogoVar

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