Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	distance	chr	external
A4GALT_chr22_42687121_42725870	42723579	C C	CA CA	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp1 HG01981.hp2 HG03831.hp1 others(4): Show HG01433.hp1 HG01981.hp2 HG03831.hp1 NA19001.hp1 NA19030.hp2 NA19063.hp1 NA19064.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0007 others(1): Show a0001c0001 a0001c0002 a0001c0007 a0002c0003	a0001c0001t0002 a0001c0002t0003 a0001c0002t0005 others(2): Show a0001c0001t0002 a0001c0002t0003 a0001c0002t0005 a0001c0007t0004 a0002c0003t0001	a0001c0001t0002g0144 a0001c0001t0002g0180 a0001c0001t0002g0319 others(4): Show a0001c0001t0002g0144 a0001c0001t0002g0180 a0001c0001t0002g0319 a0001c0002t0003g0054 a0001c0002t0005g0369 a0001c0007t0004g0394 a0002c0003t0001g0337	7	406	0.0172	1	c.-29 others(12): Show c.-2971_-2970insT	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2710	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723586	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2977T>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2716	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723587	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2978T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2717	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723590	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG02145.hp2 HG02258.hp2 others(9): Show HG01884.hp1 HG02145.hp2 HG02258.hp2 HG02602.hp2 HG02698.hp1 HG02922.hp1 HG02970.hp2 HG03098.hp1 NA18946.hp1 NA19056.hp2 NA19066.hp2 NA19089.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0008	a0001c0001t0002 a0001c0001t0004 a0001c0002t0005 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0002t0005 a0002c0003t0001 a0002c0008t0001	a0001c0001t0002g0003 a0001c0001t0002g0149 a0001c0001t0002g0150 others(8): Show a0001c0001t0002g0003 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0152 a0001c0001t0004g0288 a0001c0002t0005g0109 a0002c0003t0001g0276 a0002c0003t0001g0285 a0002c0003t0001g0286 a0002c0003t0001g0287 a0002c0008t0001g0382	12	406	0.0296	0	c.-29 others(5): Show c.-2981C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2720	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723590	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2981C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2720	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723592	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2983T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2722	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723593	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2984C>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2723	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723594	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2985C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2724	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723597	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2988C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2727	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723598	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2989A>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2728	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723599	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2990A>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2729	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723603	T T	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2994A>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2733	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723604	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-29 others(5): Show c.-2995C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2734	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723610	A A	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3001T>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2740	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723611	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3002C>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2741	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723615	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3006A>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2745	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723630	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3021G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2760	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723632	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3023T>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2762	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723633	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3024C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2763	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723638	T T	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3029A>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2768	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723639	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3030C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2769	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723640	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3031C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2770	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723643	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3034C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2773	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723644	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3035C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2774	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723646	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp2 HG02970.hp2 HG03688.hp1 HG02258.hp2 HG02970.hp2 HG03688.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0005 a0002c0003t0001 a0001c0002t0005 a0002c0003t0001	a0001c0002t0005g0170 a0002c0003t0001g0285 a0002c0003t0001g0287 a0001c0002t0005g0170 a0002c0003t0001g0285 a0002c0003t0001g0287	3	406	0.0074	0	c.-30 others(5): Show c.-3037G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2776	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723647	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3038C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2777	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723657	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0338 a0002c0003t0001g0338	1	406	0.0025	0	c.-30 others(5): Show c.-3048C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2787	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723662	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3053G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2792	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723663	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3054G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2793	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723670	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3061G>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2800	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723671	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3062C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2801	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723675	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3066C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2805	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723677	T T	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3068A>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2807	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723678	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3069G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2808	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723681	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3072C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2811	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723683	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3074G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2813	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723685	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3076T>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2815	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723686	G G	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3077C>G	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2816	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723688	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3079G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2818	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723690	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3081C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2820	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723691	G G	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3082C>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2821	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723693	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 NA19001.hp1 NA19081.hp2 HG03688.hp1 NA19001.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0003 a0001c0002t0005 a0001c0001t0002 a0001c0002t0003 a0001c0002t0005	a0001c0001t0002g0319 a0001c0002t0003g0060 a0001c0002t0005g0170 a0001c0001t0002g0319 a0001c0002t0003g0060 a0001c0002t0005g0170	3	406	0.0074	-1	c.-30 others(6): Show c.-3085delT	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2824	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723696	C C	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3087G>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2826	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723700	G G	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3091C>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2830	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723701	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3092G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2831	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723702	A A	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3093T>C	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2832	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723703	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3094T>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2833	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723707	C C	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-30 others(5): Show c.-3098G>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2837	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723709	C C	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-31 others(5): Show c.-3100G>T	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2839	chr22	TogoVar
A4GALT_chr22_42687121_42725870	42723710	A A	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0170 a0001c0002t0005g0170	1	406	0.0025	0	c.-31 others(5): Show c.-3101T>A	A4GALT	ENSG00000128274.17	transcript	ENST00000642412.2	protein_coding	2840	chr22	TogoVar

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