Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2M_chr12_9062708_9120919	NA19001	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0072	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA19001	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0319	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19001	hp2	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0219	JPT	EAS	A4GALT	chr22	42687121	42725870
AADACL2_chr3_151728927_151766339	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19001	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19001	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19001	hp2	a0008	a0008c0016	a0008c0016t0013	a0008c0016t0013g0016	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19001	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19001	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AAR2_chr20_36231478_36261933	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0057	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0064	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19001	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19001	hp1	a0001	a0001c0017	a0001c0017t0020	a0001c0017t0020g0054	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19001	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	NA19001	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0223	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19001	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0320	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA10_chr17_69143007_69233824	NA19001	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0022	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19001	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0283	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA19001	hp1	a0003	a0003c0002	a0003c0002t0003	a0003c0002t0003g0127	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19001	hp2	a0002	a0002c0011	a0002c0011t0004	a0002c0011t0004g0213	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA5_chr17_69239311_69332133	NA19001	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0096	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19001	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0275	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19001	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0202	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0239	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19001	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0069	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB1_chr7_87498017_87605884	NA19001	hp1	a0003	a0003c0004	a0003c0004t0002	a0003c0004t0002g0075	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA19001	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0322	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	NA19001	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0151	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0190	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB6_chr2_219204772_219223958	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0032	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCC5_chr3_183914934_184022884	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0197	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA19001	hp2	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0276	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCD4_chr14_74280269_74307934	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0189	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA19001	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCG4_chr11_119144052_119167653	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCG4	chr11	119144052	119167653
ABCG4_chr11_119144052_119167653	NA19001	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	ABCG4	chr11	119144052	119167653
ABHD10_chr3_111974026_111998368	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD10_chr3_111974026_111998368	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD14A_chr3_51970064_51986196	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD14A	chr3	51970064	51986196
ABHD14A_chr3_51970064_51986196	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABHD14A	chr3	51970064	51986196
ABHD17A_chr19_1871810_1890496	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABHD17A	chr19	1871810	1890496
ABHD17A_chr19_1871810_1890496	NA19001	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	ABHD17A	chr19	1871810	1890496
ABHD17C_chr15_80690310_80760621	NA19001	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	ABHD17C	chr15	80690310	80760621
ABHD17C_chr15_80690310_80760621	NA19001	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0336	JPT	EAS	ABHD17C	chr15	80690310	80760621