Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
AADACL2_chr3_151728927_151766339	NA19059	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19059	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AASDHPPT_chr11_106072662_106103695	NA19059	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0116	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
ABCA2_chr9_137002234_137033237	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCB8_chr7_151023450_151052782	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	ABCB8	chr7	151023450	151052782
ABHD10_chr3_111974026_111998368	NA19059	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0002	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD10_chr3_111974026_111998368	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD13_chr13_108213392_108239243	NA19059	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0015	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD15_chr17_29555547_29572037	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD15	chr17	29555547	29572037
ABHD15_chr17_29555547_29572037	NA19059	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0104	JPT	EAS	ABHD15	chr17	29555547	29572037
ABITRAM_chr9_108929400_108945954	NA19059	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABITRAM_chr9_108929400_108945954	NA19059	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABRA_chr8_106754483_106775244	NA19059	hp1	a0001	a0001c0004	a0001c0004t0006	a0001c0004t0006g0025	JPT	EAS	ABRA	chr8	106754483	106775244
ABRA_chr8_106754483_106775244	NA19059	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0071	JPT	EAS	ABRA	chr8	106754483	106775244
ABTB1_chr3_127667952_127685926	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABTB1	chr3	127667952	127685926
ABTB1_chr3_127667952_127685926	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABTB1	chr3	127667952	127685926
ACAT1_chr11_108116567_108152603	NA19059	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0207	JPT	EAS	ACAT1	chr11	108116567	108152603
ACAT1_chr11_108116567_108152603	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	JPT	EAS	ACAT1	chr11	108116567	108152603
ACCSL_chr11_44042981_44064977	NA19059	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	ACCSL	chr11	44042981	44064977
ACCSL_chr11_44042981_44064977	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ACCSL	chr11	44042981	44064977
ACOD1_chr13_76943511_76963638	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ACOD1	chr13	76943511	76963638
ACOT2_chr14_73564213_73580655	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	JPT	EAS	ACOT2	chr14	73564213	73580655
ACOT2_chr14_73564213_73580655	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ACOT2	chr14	73564213	73580655
ACOT4_chr14_73586873_73600766	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	JPT	EAS	ACOT4	chr14	73586873	73600766
ACOT4_chr14_73586873_73600766	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ACOT4	chr14	73586873	73600766
ACP1_chr2_259947_283283	NA19059	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	JPT	EAS	ACP1	chr2	259947	283283
ACP1_chr2_259947_283283	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	ACP1	chr2	259947	283283
ACP6_chr1_147637230_147675524	NA19059	hp1	a0001	a0001c0002	a0001c0002t0021	a0001c0002t0021g0110	JPT	EAS	ACP6	chr1	147637230	147675524
ACP6_chr1_147637230_147675524	NA19059	hp2	a0001	a0001c0003	a0001c0003t0057	a0001c0003t0057g0132	JPT	EAS	ACP6	chr1	147637230	147675524
ACTA2_chr10_88930074_88957773	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ACTA2	chr10	88930074	88957773
ACTA2_chr10_88930074_88957773	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ACTA2	chr10	88930074	88957773
ACTG1_chr17_81504971_81517799	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ACTG1	chr17	81504971	81517799
ACTG1_chr17_81504971_81517799	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ACTG1	chr17	81504971	81517799
ACTL6B_chr7_100638097_100661448	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0048	JPT	EAS	ACTL6B	chr7	100638097	100661448
ACTL6B_chr7_100638097_100661448	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	JPT	EAS	ACTL6B	chr7	100638097	100661448
ACTL7A_chr9_108857266_108868756	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ACTL7A	chr9	108857266	108868756
ACTL7A_chr9_108857266_108868756	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ACTL7A	chr9	108857266	108868756
ACY3_chr11_67637555_67655730	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	ACY3	chr11	67637555	67655730
ACY3_chr11_67637555_67655730	NA19059	hp2	a0002	a0002c0003	a0002c0003t0002	a0002c0003t0002g0031	JPT	EAS	ACY3	chr11	67637555	67655730
ADAD1_chr4_122374011_122434784	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	JPT	EAS	ADAD1	chr4	122374011	122434784
ADAD1_chr4_122374011_122434784	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0227	JPT	EAS	ADAD1	chr4	122374011	122434784
ADAM30_chr1_119888533_119901515	NA19059	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0000	JPT	EAS	ADAM30	chr1	119888533	119901515
ADAM30_chr1_119888533_119901515	NA19059	hp2	a0005	a0005c0011	a0005c0011t0001	a0005c0011t0001g0000	JPT	EAS	ADAM30	chr1	119888533	119901515
ADAMTSL4_chr1_150544408_150565933	NA19059	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0003	JPT	EAS	ADAMTSL4	chr1	150544408	150565933
ADAMTSL4_chr1_150544408_150565933	NA19059	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ADAMTSL4	chr1	150544408	150565933