Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
ENTPD2 199 62 49 34 0 0 0.771 0.240 0.190 0.132 0.000 0.000 chr9 137043107 137059061
ENTPD3 186 65 62 35 0 0 0.721 0.252 0.240 0.136 0.000 0.000 chr3 40382184 40433744
ENTPD4 205 76 47 27 0 0 0.795 0.295 0.182 0.105 0.000 0.000 chr8 23424162 23462647
ENTPD5 189 60 54 34 0 0 0.733 0.233 0.209 0.132 0.000 0.000 chr14 73958230 74024288
ENTPD6 189 53 57 44 0 0 0.733 0.205 0.221 0.171 0.000 0.000 chr20 25190712 25233075
ENTPD7 203 75 45 25 0 0 0.787 0.291 0.174 0.097 0.000 0.000 chr10 99654509 99716241
ENTPD8 195 56 48 34 0 0 0.756 0.217 0.186 0.132 0.000 0.000 chr9 137429364 137446357
ENTR1 205 61 47 38 0 0 0.795 0.236 0.182 0.147 0.000 0.000 chr9 136396922 136415614
ENTREP1 170 56 61 35 0 0 0.659 0.217 0.236 0.136 0.000 0.000 chr9 69320215 69397456
ENTREP2 62 6 99 51 0 0 0.240 0.023 0.384 0.198 0.000 0.000 chr15 29115252 29575979
ENTREP3 197 66 57 36 0 0 0.764 0.256 0.221 0.140 0.000 0.000 chr1 155242205 155260483
ENY2 213 77 40 26 1 1 0.826 0.298 0.155 0.101 0.004 0.004 chr8 109329347 109350954
EOGT 221 84 32 18 0 0 0.857 0.326 0.124 0.070 0.000 0.000 chr3 68970225 69018684
EOLA1 95 27 157 72 0 0 0.368 0.105 0.609 0.279 0.000 0.000 chrX 149536012 149553331
EOLA2 104 33 145 64 0 0 0.403 0.128 0.562 0.248 0.000 0.000 chrX 149927197 149943491
EOMES 199 69 57 34 0 0 0.771 0.267 0.221 0.132 0.000 0.000 chr3 27710953 27727323
EP300 149 37 97 61 0 0 0.578 0.143 0.376 0.236 0.000 0.000 chr22 41087592 41185077
EP400 103 22 114 64 0 0 0.399 0.085 0.442 0.248 0.000 0.000 chr12 131944942 132085460
EPAS1 162 47 64 39 0 0 0.628 0.182 0.248 0.151 0.000 0.000 chr2 46292407 46391697
EPB41L1 117 27 123 69 0 0 0.453 0.105 0.477 0.267 0.000 0.000 chr20 36149740 36237799
EPB41L2 177 59 59 34 0 0 0.686 0.229 0.229 0.132 0.000 0.000 chr6 130834347 131068245
EPB41L3 110 21 95 52 0 0 0.426 0.081 0.368 0.202 0.000 0.000 chr18 5387386 5548997
EPB41L4A 113 20 92 57 0 0 0.438 0.078 0.357 0.221 0.000 0.000 chr5 112157619 112424277
EPB41L4B 158 53 53 28 0 0 0.612 0.205 0.205 0.109 0.000 0.000 chr9 109166974 109326059
EPB41L5 138 47 95 48 0 0 0.535 0.182 0.368 0.186 0.000 0.000 chr2 120008077 120184119
EPB41 155 42 78 44 0 0 0.601 0.163 0.302 0.171 0.000 0.000 chr1 28909569 29125041
EPB42 143 54 109 46 0 0 0.554 0.209 0.422 0.178 0.000 0.000 chr15 43192227 43226018
EPC1 158 43 84 54 0 0 0.612 0.167 0.326 0.209 0.000 0.000 chr10 32262751 32352158
EPC2 153 56 83 40 0 0 0.593 0.217 0.322 0.155 0.000 0.000 chr2 148639751 148792569
EPCAM 224 85 29 16 0 0 0.868 0.329 0.112 0.062 0.000 0.000 chr2 47364311 47392020
EPDR1 223 79 30 22 1 1 0.864 0.306 0.116 0.085 0.004 0.004 chr7 37915640 37956936
EPG5 151 49 79 42 0 0 0.585 0.190 0.306 0.163 0.000 0.000 chr18 45842609 45972329
EPGN 182 60 73 44 0 0 0.705 0.233 0.283 0.171 0.000 0.000 chr4 74303470 74321789
EPHA10 190 57 47 33 0 0 0.736 0.221 0.182 0.128 0.000 0.000 chr1 37710976 37770120
EPHA1 212 77 38 20 0 0 0.822 0.298 0.147 0.078 0.000 0.000 chr7 143386129 143413856
EPHA2 155 29 82 57 0 0 0.601 0.112 0.318 0.221 0.000 0.000 chr1 16119337 16161069
EPHA3 99 18 91 51 0 0 0.384 0.070 0.353 0.198 0.000 0.000 chr3 89102621 89487134
EPHA4 146 45 70 35 0 0 0.566 0.174 0.271 0.136 0.000 0.000 chr2 221413027 221577304
EPHA5 116 27 79 49 0 0 0.450 0.105 0.306 0.190 0.000 0.000 chr4 65314567 65675489
EPHA6 41 2 128 62 0 0 0.159 0.008 0.496 0.240 0.000 0.000 chr3 96809594 97766532
EPHA7 139 33 63 42 0 0 0.539 0.128 0.244 0.163 0.000 0.000 chr6 93235020 93424559
EPHA8 170 40 69 49 0 0 0.659 0.155 0.267 0.190 0.000 0.000 chr1 22558489 22608595
EPHB1 66 1 109 63 0 0 0.256 0.004 0.422 0.244 0.000 0.000 chr3 134790260 135265467
EPHB2 123 25 68 46 0 0 0.477 0.097 0.264 0.178 0.000 0.000 chr1 22705839 22926500
EPHB3 178 52 72 46 0 0 0.690 0.202 0.279 0.178 0.000 0.000 chr3 184556785 184587408
EPHB4 181 59 64 36 0 0 0.702 0.229 0.248 0.140 0.000 0.000 chr7 100797565 100832523
EPHB6 155 37 99 66 0 0 0.601 0.143 0.384 0.256 0.000 0.000 chr7 142850076 142876093
EPHX1 210 69 38 28 0 0 0.814 0.267 0.147 0.109 0.000 0.000 chr1 225805124 225850563
EPHX2 186 65 57 31 0 0 0.721 0.252 0.221 0.120 0.000 0.000 chr8 27486143 27550564
EPHX3 186 58 61 39 0 0 0.721 0.225 0.236 0.151 0.000 0.000 chr19 15221919 15237448