Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
FBXO24 169 46 82 52 1 1 0.655 0.178 0.318 0.202 0.004 0.004 chr7 100581328 100606117
FBXO25 205 67 38 29 0 0 0.795 0.260 0.147 0.112 0.000 0.000 chr8 401958 482967
FBXO27 211 73 43 29 0 0 0.818 0.283 0.167 0.112 0.000 0.000 chr19 39019021 39037549
FBXO28 196 68 47 29 0 0 0.760 0.264 0.182 0.112 0.000 0.000 chr1 224109111 224167047
FBXO2 213 71 39 28 0 0 0.826 0.275 0.151 0.109 0.000 0.000 chr1 11643387 11659429
FBXO30 181 61 68 37 0 0 0.702 0.236 0.264 0.143 0.000 0.000 chr6 145788502 145819795
FBXO31 187 53 47 34 0 0 0.725 0.205 0.182 0.132 0.000 0.000 chr16 87321987 87388776
FBXO32 203 69 39 23 0 0 0.787 0.267 0.151 0.089 0.000 0.000 chr8 123492889 123546206
FBXO33 194 66 60 36 0 0 0.752 0.256 0.233 0.140 0.000 0.000 chr14 39392684 39437433
FBXO34 166 57 68 35 0 0 0.643 0.221 0.264 0.136 0.000 0.000 chr14 55266421 55358611
FBXO36 170 46 63 44 0 0 0.659 0.178 0.244 0.171 0.000 0.000 chr2 229917503 230018119
FBXO38 184 77 66 28 0 0 0.713 0.298 0.256 0.109 0.000 0.000 chr5 148378958 148447836
FBXO39 227 82 29 22 1 0 0.880 0.318 0.112 0.085 0.004 0.000 chr17 6771215 6792646
FBXO3 190 68 58 30 0 0 0.736 0.264 0.225 0.116 0.000 0.000 chr11 33735944 33779520
FBXO40 203 66 39 29 0 0 0.787 0.256 0.151 0.112 0.000 0.000 chr3 121588379 121635295
FBXO41 186 56 56 38 0 0 0.721 0.217 0.217 0.147 0.000 0.000 chr2 73249690 73289478
FBXO42 146 38 93 57 0 0 0.566 0.147 0.360 0.221 0.000 0.000 chr1 16241840 16357480
FBXO43 195 67 60 36 0 0 0.756 0.260 0.233 0.140 0.000 0.000 chr8 100128351 100150817
FBXO44 204 65 49 35 0 0 0.791 0.252 0.190 0.136 0.000 0.000 chr1 11649877 11668327
FBXO45 225 83 28 18 0 0 0.872 0.322 0.109 0.070 0.000 0.000 chr3 196563660 196594059
FBXO46 204 71 45 27 0 0 0.791 0.275 0.174 0.105 0.000 0.000 chr19 45705629 45735896
FBXO47 171 58 69 35 0 0 0.663 0.225 0.267 0.136 0.000 0.000 chr17 38931432 38972403
FBXO48 116 22 129 77 0 0 0.450 0.085 0.500 0.298 0.000 0.000 chr2 68454422 68472294
FBXO4 124 20 122 77 0 0 0.481 0.078 0.473 0.298 0.000 0.000 chr5 41920281 41946743
FBXO5 218 80 33 21 0 0 0.845 0.310 0.128 0.081 0.000 0.000 chr6 152965535 152988041
FBXO6 194 57 54 38 0 0 0.752 0.221 0.209 0.147 0.000 0.000 chr1 11659200 11679354
FBXO7 206 80 44 22 0 0 0.798 0.310 0.171 0.085 0.000 0.000 chr22 32469811 32503829
FBXO8 188 66 59 30 0 0 0.729 0.256 0.229 0.116 0.000 0.000 chr4 174231658 174288667
FBXO9 154 48 90 47 0 0 0.597 0.186 0.349 0.182 0.000 0.000 chr6 53060404 53105873
FBXW10B 225 83 27 16 0 0 0.872 0.322 0.105 0.062 0.000 0.000 chr17 15578886 15624704
FBXW10 192 57 51 34 0 0 0.744 0.221 0.198 0.132 0.000 0.000 chr17 18739054 18784349
FBXW11 78 9 136 79 0 0 0.302 0.035 0.527 0.306 0.000 0.000 chr5 171856549 172011638
FBXW12 169 59 82 40 1 0 0.655 0.229 0.318 0.155 0.004 0.000 chr3 48367219 48399725
FBXW2 164 60 79 35 0 0 0.636 0.233 0.306 0.136 0.000 0.000 chr9 120751974 120798416
FBXW4 104 27 120 60 0 0 0.403 0.105 0.465 0.233 0.000 0.000 chr10 101605666 101700170
FBXW5 216 70 38 32 1 0 0.837 0.271 0.147 0.124 0.004 0.000 chr9 136935435 136949738
FBXW7 133 51 94 43 0 0 0.516 0.198 0.364 0.167 0.000 0.000 chr4 152315544 152541092
FBXW8 144 40 92 53 0 0 0.558 0.155 0.357 0.205 0.000 0.000 chr12 116905950 117036148
FBXW9 192 61 58 37 0 0 0.744 0.236 0.225 0.143 0.000 0.000 chr19 12683916 12701631
FCAMR 197 72 57 29 1 1 0.764 0.279 0.221 0.112 0.004 0.004 chr1 206952967 206975460
FCAR 220 73 32 26 0 0 0.853 0.283 0.124 0.101 0.000 0.000 chr19 54869235 54896420
FCER1A 223 88 34 16 1 1 0.864 0.341 0.132 0.062 0.004 0.004 chr1 159297336 159313202
FCER1G 223 86 33 18 1 0 0.864 0.333 0.128 0.070 0.004 0.000 chr1 161210295 161224245
FCER2 227 75 25 24 0 0 0.880 0.291 0.097 0.093 0.000 0.000 chr19 7683776 7707131
FCF1 181 60 69 41 1 1 0.702 0.233 0.267 0.159 0.004 0.004 chr14 74708144 74743620
FCGR1A 206 74 49 29 1 1 0.798 0.287 0.190 0.112 0.004 0.004 chr1 149777694 149796675
FCGR2A 227 84 30 20 0 0 0.880 0.326 0.116 0.078 0.000 0.000 chr1 161500457 161524829
FCGR2B 196 64 57 37 0 0 0.760 0.248 0.221 0.143 0.000 0.000 chr1 161658143 161683654
FCGR3A 225 87 25 14 7 3 0.872 0.337 0.097 0.054 0.027 0.012 chr1 161536759 161554818
FCGR3B 177 75 55 22 24 7 0.686 0.291 0.213 0.085 0.093 0.027 chr1 161618196 161636176