Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
FCGRT 177 49 67 45 0 0 0.686 0.190 0.260 0.174 0.000 0.000 chr19 49507661 49531428
FCHO1 175 39 59 46 0 0 0.678 0.151 0.229 0.178 0.000 0.000 chr19 17746477 17793561
FCHO2 142 47 91 48 0 0 0.550 0.182 0.353 0.186 0.000 0.000 chr5 72951041 73095522
FCHSD1 213 71 40 29 0 0 0.826 0.275 0.155 0.112 0.000 0.000 chr5 141634302 141656418
FCHSD2 144 40 73 42 0 0 0.558 0.155 0.283 0.163 0.000 0.000 chr11 72831745 73147318
FCMR 189 65 60 36 0 0 0.733 0.252 0.233 0.140 0.000 0.000 chr1 206898317 206926941
FCN1 216 78 36 22 0 0 0.837 0.302 0.140 0.085 0.000 0.000 chr9 134898232 134922912
FCN2 235 89 21 14 0 0 0.911 0.345 0.081 0.054 0.000 0.000 chr9 134875810 134892523
FCN3 201 62 54 40 0 0 0.779 0.240 0.209 0.155 0.000 0.000 chr1 27364110 27379824
FCRL1 202 74 51 27 0 0 0.783 0.287 0.198 0.105 0.000 0.000 chr1 157789403 157825120
FCRL2 189 63 55 32 0 0 0.733 0.244 0.213 0.124 0.000 0.000 chr1 157740733 157782132
FCRL3 190 71 58 26 0 0 0.736 0.275 0.225 0.101 0.000 0.000 chr1 157671481 157705769
FCRL4 200 73 52 27 0 0 0.775 0.283 0.202 0.105 0.000 0.000 chr1 157568747 157603085
FCRL5 182 61 62 37 0 0 0.705 0.236 0.240 0.143 0.000 0.000 chr1 157508377 157557515
FCRL6 225 86 30 18 0 0 0.872 0.333 0.116 0.070 0.000 0.000 chr1 159797360 159821257
FCRLA 235 91 20 12 1 1 0.911 0.353 0.078 0.047 0.004 0.004 chr1 161702229 161719352
FCRLB 227 88 28 15 1 0 0.880 0.341 0.109 0.058 0.004 0.000 chr1 161716544 161733143
FCSK 177 49 63 43 0 0 0.686 0.190 0.244 0.167 0.000 0.000 chr16 70449595 70485274
FDCSP 224 85 34 20 0 0 0.868 0.329 0.132 0.078 0.000 0.000 chr4 70221124 70240252
FDFT1 228 83 23 15 0 0 0.884 0.322 0.089 0.058 0.000 0.000 chr8 11797741 11844298
FDPS 172 47 82 55 0 0 0.667 0.182 0.318 0.213 0.000 0.000 chr1 155303866 155325665
FDX1 199 73 50 28 0 0 0.771 0.283 0.194 0.109 0.000 0.000 chr11 110424948 110469884
FDX2 221 76 33 26 1 0 0.857 0.295 0.128 0.101 0.004 0.000 chr19 10305045 10321015
FDXACB1 195 66 63 39 0 0 0.756 0.256 0.244 0.151 0.000 0.000 chr11 111869056 111884165
FDXR 205 64 45 35 1 1 0.795 0.248 0.174 0.136 0.004 0.004 chr17 74857497 74877994
FECH 210 72 35 26 0 0 0.814 0.279 0.136 0.101 0.000 0.000 chr18 57539377 57591702
FEM1A 214 70 37 28 1 1 0.829 0.271 0.143 0.109 0.004 0.004 chr19 4786734 4806273
FEM1B 155 38 95 59 0 0 0.601 0.147 0.368 0.229 0.000 0.000 chr15 68272745 68300862
FEM1C 202 78 48 21 0 0 0.783 0.302 0.186 0.081 0.000 0.000 chr5 115515908 115549775
FEN1 168 48 90 57 0 0 0.651 0.186 0.349 0.221 0.000 0.000 chr11 61787911 61802238
FER1L5 112 22 98 46 0 0 0.434 0.085 0.380 0.178 0.000 0.000 chr2 96637764 96709883
FER1L6 97 22 64 38 0 0 0.376 0.085 0.248 0.147 0.000 0.000 chr8 123846987 124125061
FERD3L 234 91 21 13 1 0 0.907 0.353 0.081 0.050 0.004 0.000 chr7 19139782 19150421
FERMT1 183 61 67 40 0 0 0.709 0.236 0.260 0.155 0.000 0.000 chr20 6069845 6128030
FERMT2 143 44 87 48 0 0 0.554 0.171 0.337 0.186 0.000 0.000 chr14 52852273 52956050
FERMT3 184 60 63 34 0 0 0.713 0.233 0.244 0.132 0.000 0.000 chr11 64201721 64228891
FER 68 16 126 75 0 0 0.264 0.062 0.488 0.291 0.000 0.000 chr5 108742897 109201841
FES 205 65 46 35 0 0 0.795 0.252 0.178 0.136 0.000 0.000 chr15 90879504 90900776
FETUB 229 85 24 16 1 1 0.888 0.329 0.093 0.062 0.004 0.004 chr3 186635399 186658141
FEV 181 60 70 41 1 0 0.702 0.233 0.271 0.159 0.004 0.000 chr2 218976087 218990184
FEZ1 177 58 59 31 0 0 0.686 0.225 0.229 0.120 0.000 0.000 chr11 125437881 125501265
FEZ2 201 72 52 30 0 0 0.779 0.279 0.202 0.116 0.000 0.000 chr2 36547258 36603168
FEZF1 217 75 34 23 0 0 0.841 0.291 0.132 0.089 0.000 0.000 chr7 122296303 122309750
FEZF2 209 75 43 25 1 0 0.810 0.291 0.167 0.097 0.004 0.000 chr3 62364681 62378550
FFAR1 229 83 27 20 0 0 0.888 0.322 0.105 0.078 0.000 0.000 chr19 35342902 35358864
FFAR2 226 78 29 24 0 0 0.876 0.302 0.112 0.093 0.000 0.000 chr19 35443257 35456767
FFAR3 207 64 50 40 0 0 0.802 0.248 0.194 0.155 0.000 0.000 chr19 35353460 35365489
FFAR4 196 60 50 36 0 0 0.760 0.233 0.194 0.140 0.000 0.000 chr10 93561665 93595072
FGA 213 75 43 29 2 1 0.826 0.291 0.167 0.112 0.008 0.004 chr4 154580275 154595742
FGB 221 84 36 21 0 0 0.857 0.326 0.140 0.081 0.000 0.000 chr4 154558011 154577807